CmaCh01G006170 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGAGAATTGGAATCTATCAAAGAAGGAAGGTTCAGGAAGTAGTTACCAGTCTTCTACGAATCCCAAGTCGTCGTTCACAAGGAGTGGTTCCACCACCAAATCGCCATTACTGCGATGTTCTTCACAGAGAACCTTCCCAGCTTCCACTTCCAAGACCCCCAACGATCTCCCTCGAAGTTACTCGCAGAAGAGCTCTTCTTCAGCAGGGCGTAAGTACAGCAGCTTAGCTAAGGAACAGAAGGCCCGATTCTACATCATGAGACGCTGCGTGGCGATGCTCGTTTGTTGGCACAAGCATGGCGATTCGTAAGAAAGGGTATGAAAACACAAAATGAAGAAAGATCTGTTACCCTTTTTCAGTAGCTTCCGAAATTTGATTTGTTTCCCTTCTTCTTGCGAATTGGATCTTGAGATCCCTTCATAAAATTGATGTAAATTTTTCTGCAACCCCATCGAGAAGAAGGTGGGACTTCATTTTTCTACGATTCAATTAGATCCAATCTGTAATTACATTGATGAGTTTGATGAACTTAACGCAATCCCACATCGATTATAGCAGATCGATCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGA ATGGACGAGAATTGGAATCTATCAAAGAAGGAAGGTTCAGGAAGTAGTTACCAGTCTTCTACGAATCCCAAGTCGTCGTTCACAAGGAGTGGTTCCACCACCAAATCGCCATTACTGCGATGTTCTTCACAGAGAACCTTCCCAGCTTCCACTTCCAAGACCCCCAACGATCTCCCTCGAAGTTACTCGCAGAAGAGCTCTTCTTCAGCAGGGCGTAAGTACAGCAGCTTAGCTAAGGAACAGAAGGCCCGATTCTACATCATGAGACGCTGCGTGGCGATGCTCGTTTGTTGGCACAAGCATGGCGATTCATCGATCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGA ATGGACGAGAATTGGAATCTATCAAAGAAGGAAGGTTCAGGAAGTAGTTACCAGTCTTCTACGAATCCCAAGTCGTCGTTCACAAGGAGTGGTTCCACCACCAAATCGCCATTACTGCGATGTTCTTCACAGAGAACCTTCCCAGCTTCCACTTCCAAGACCCCCAACGATCTCCCTCGAAGTTACTCGCAGAAGAGCTCTTCTTCAGCAGGGCGTAAGTACAGCAGCTTAGCTAAGGAACAGAAGGCCCGATTCTACATCATGAGACGCTGCGTGGCGATGCTCGTTTGTTGGCACAAGCATGGCGATTCATCGATCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGA MDENWNLSKKEGSGSSYQSSTNPKSSFTRSGSTTKSPLLRCSSQRTFPASTSKTPNDLPRSYSQKSSSSAGRKYSSLAKEQKARFYIMRRCVAMLVCWHKHGDSSIPSSSSSSSSSS Homology
BLAST of CmaCh01G006170 vs. ExPASy Swiss-Prot
Match: Q8L7D0 (Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.4e-19 Identity = 63/115 (54.78%), Postives = 80/115 (69.57%), Query Frame = 0
BLAST of CmaCh01G006170 vs. ExPASy Swiss-Prot
Match: Q6IM92 (Small polypeptide DEVIL 9 OS=Arabidopsis thaliana OX=3702 GN=DVL9 PE=1 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 2.6e-16 Identity = 59/108 (54.63%), Postives = 73/108 (67.59%), Query Frame = 0
BLAST of CmaCh01G006170 vs. ExPASy Swiss-Prot
Match: Q8LE84 (Small polypeptide DEVIL 18 OS=Arabidopsis thaliana OX=3702 GN=DVL18 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09 Identity = 43/90 (47.78%), Postives = 55/90 (61.11%), Query Frame = 0
BLAST of CmaCh01G006170 vs. ExPASy Swiss-Prot
Match: Q6IM86 (Small polypeptide DEVIL 15 OS=Arabidopsis thaliana OX=3702 GN=DVL15 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 6.3e-07 Identity = 39/89 (43.82%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of CmaCh01G006170 vs. ExPASy Swiss-Prot
Match: Q8S8S3 (Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.7e-04 Identity = 38/107 (35.51%), Postives = 47/107 (43.93%), Query Frame = 0
BLAST of CmaCh01G006170 vs. ExPASy TrEMBL
Match: A0A6J1K862 (uncharacterized protein LOC111492575 OS=Cucurbita maxima OX=3661 GN=LOC111492575 PE=4 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 1.0e-47 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of CmaCh01G006170 vs. ExPASy TrEMBL
Match: A0A6J1G9A8 (uncharacterized protein LOC111452118 OS=Cucurbita moschata OX=3662 GN=LOC111452118 PE=4 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 1.0e-47 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of CmaCh01G006170 vs. ExPASy TrEMBL
Match: A0A1S3C552 (uncharacterized protein LOC103497141 OS=Cucumis melo OX=3656 GN=LOC103497141 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 9.4e-38 Identity = 91/106 (85.85%), Postives = 97/106 (91.51%), Query Frame = 0
BLAST of CmaCh01G006170 vs. ExPASy TrEMBL
Match: A0A0A0M0J4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G524140 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 2.1e-37 Identity = 91/106 (85.85%), Postives = 96/106 (90.57%), Query Frame = 0
BLAST of CmaCh01G006170 vs. ExPASy TrEMBL
Match: A0A6J1DNH9 (uncharacterized protein LOC111022262 OS=Momordica charantia OX=3673 GN=LOC111022262 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 3.6e-37 Identity = 88/104 (84.62%), Postives = 95/104 (91.35%), Query Frame = 0
BLAST of CmaCh01G006170 vs. NCBI nr
Match: XP_022948433.1 (uncharacterized protein LOC111452118 [Cucurbita moschata] >XP_022997686.1 uncharacterized protein LOC111492575 [Cucurbita maxima] >XP_023523193.1 uncharacterized protein LOC111787458 [Cucurbita pepo subsp. pepo] >KAG6607255.1 hypothetical protein SDJN03_00597, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036939.1 hypothetical protein SDJN02_00559, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 199.1 bits (505), Expect = 2.1e-47 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of CmaCh01G006170 vs. NCBI nr
Match: XP_038893855.1 (uncharacterized protein LOC120082667 [Benincasa hispida]) HSP 1 Score: 168.7 bits (426), Expect = 3.0e-38 Identity = 93/106 (87.74%), Postives = 98/106 (92.45%), Query Frame = 0
BLAST of CmaCh01G006170 vs. NCBI nr
Match: XP_008457457.1 (PREDICTED: uncharacterized protein LOC103497141 [Cucumis melo] >XP_016902125.1 PREDICTED: uncharacterized protein LOC103497141 [Cucumis melo]) HSP 1 Score: 166.0 bits (419), Expect = 1.9e-37 Identity = 91/106 (85.85%), Postives = 97/106 (91.51%), Query Frame = 0
BLAST of CmaCh01G006170 vs. NCBI nr
Match: XP_004153482.1 (uncharacterized protein LOC101207628 [Cucumis sativus] >KGN65741.1 hypothetical protein Csa_019610 [Cucumis sativus]) HSP 1 Score: 164.9 bits (416), Expect = 4.3e-37 Identity = 91/106 (85.85%), Postives = 96/106 (90.57%), Query Frame = 0
BLAST of CmaCh01G006170 vs. NCBI nr
Match: XP_022155122.1 (uncharacterized protein LOC111022262 [Momordica charantia]) HSP 1 Score: 164.1 bits (414), Expect = 7.4e-37 Identity = 88/104 (84.62%), Postives = 95/104 (91.35%), Query Frame = 0
BLAST of CmaCh01G006170 vs. TAIR 10
Match: AT2G29125.1 (ROTUNDIFOLIA like 2 ) HSP 1 Score: 97.1 bits (240), Expect = 1.0e-20 Identity = 63/115 (54.78%), Postives = 80/115 (69.57%), Query Frame = 0
BLAST of CmaCh01G006170 vs. TAIR 10
Match: AT1G07490.1 (ROTUNDIFOLIA like 3 ) HSP 1 Score: 86.3 bits (212), Expect = 1.8e-17 Identity = 59/108 (54.63%), Postives = 73/108 (67.59%), Query Frame = 0
BLAST of CmaCh01G006170 vs. TAIR 10
Match: AT5G59510.1 (ROTUNDIFOLIA like 5 ) HSP 1 Score: 63.5 bits (153), Expect = 1.3e-10 Identity = 43/90 (47.78%), Postives = 55/90 (61.11%), Query Frame = 0
BLAST of CmaCh01G006170 vs. TAIR 10
Match: AT3G46613.1 (ROTUNDIFOLIA like 4 ) HSP 1 Score: 55.1 bits (131), Expect = 4.5e-08 Identity = 39/89 (43.82%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of CmaCh01G006170 vs. TAIR 10
Match: AT2G39705.1 (ROTUNDIFOLIA like 8 ) HSP 1 Score: 47.0 bits (110), Expect = 1.2e-05 Identity = 38/107 (35.51%), Postives = 47/107 (43.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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