CmaCh01G005770 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G005770
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	chitinase 2-like
Location	Cma_Chr01: 2996783 .. 2998522 (+)
RNA-Seq Expression	CmaCh01G005770
Synteny	CmaCh01G005770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATGGATGGAATAATTGTTGTTCTTCTATTGATTCTGGTGGCTCCGCCTTCTAACGCGGCGGTGGTTGTACCGGCGACTGTGTTTAGAGAATACATAGGAGCTGAGTTCAATGATGTCAAATTTTCCGACGTTCCGATTAACACAAATGTAGAAGAGTTTCACTTTCTCATGTCGTTTGCAATAGACTTCGACAGCTCCCGCCGTTGTTTCACTAATGGAGTATTCAACGTTTTCTGGGATTCCTATAATCTTAGCCCTTCCGCTGTTGCTGCCATTAAAAAGGTAATCAAACGTTCAACAACCCAATGTTATACATTAAAATATATATATATATATATCACATTGTCCATTTTGAACCTAAGCTCTCGTAGCGTTGTTTTTTCAAAAGGTTTCGTAGCAACATAAATAGTATTCTTTACTTATAAACTCATGATTTTCCTCTTAATTAGCCAATGTGGGACTACTCTTTTTAATAATTCTCAACAATCTCCCTCTCGAACAAATTACATCATAGAATCTCCCTTGATGCCTATGAAACTCTCGATCAGTCTCCTCTTAATCGAGACTCCACTCCTTCTCTAAAGTCCTCGAACAAAGTTCACCTTTTGTTCGACACTTAAGTCACTCTTGACTACACCTCCGTGGCTCACAATTTCTATTGGCATGGCTAAGTTAAGAGCATGACTCTGATACTATGTTAGAAATCACGACTTTCCACAATAGTATGATATTGTCCACTTTAAGCATAAGCTCTCGTGGCTTTATTTTTGTTGAGATATAATTCAAAGTATTCAAAACTGAGATATAATTTAAAACCGATATAATTCAAAGTATTGAAAGTACCAAGATTTTAGAAGATTGTCAGTAGATTTGAATTTATAGAATTTCATAATTTACTATTAGCTTATAAGCCTATAAATATTGGGATCTGTACTATTTTATCGGTTCTTATTTCTTTCAATATCCCTTTCCCCAACCGTTTTTTGTTTCTCTAAAAGGTCTCGTATGAAAAGAGATAGTATTTCTTACTTATAAATTCATAATTTTTCTCTTAACTAACCAATGCTATTTACTTGGACATTAACATAATTGTGTGCTTAGGATCATTCAAACGTGAGAGTGGGGGTAAGTCTTGGAGGAGACAGCGTGGGAGACTCAGGCTTTGTTTATTTCAAACCTTCTTCAATAGCTTCATGGGTTTCCAACGCAGAACGTTCACTCACAAAGCTCATAAAAACCTTCAATCTCGACGGCATCGACATCGATTACGAACACTTCGAGTCGGACCCGAACACGTTCGCTGAGTGCATAGGGCAGCTAATTAGACGGCTAAAGAAGAAGGGTGTCATCTCATTTGCTTCCATTGCCCCTTTTGACGACGCTGAAGTTCAGGCCCATTACTTAGCCTTGTGGAAAAGATACGGGCAGTTGATAGATTATGTTAATTTTCAATTCTATGCTTATGATAAGACCACCACAGTTCATCAGTTTATCAAACATTTCAAAGCTCAAAGCTCAAATTATGAAGGTGGTAGGATCCTGGCAAGCTTAGCCAGCGACGATAGCGGCGGATTGTTGCCAAAGAATGGGTTTTTTAAGGCATGTCGAAGGCTTAGAACGGACAAACTCCTCCATGGAATCTTTATTTGGTCTGCAGATGATTCACAAGCTCATGGTTTTAGGTATGAAAAGAAGGCACAAGCACTTCTACAAAGCCCCAACTACCACTATTGA

mRNA sequence

ATGGAAATGGATGGAATAATTGTTGTTCTTCTATTGATTCTGGTGGCTCCGCCTTCTAACGCGGCGGTGGTTGTACCGGCGACTGTGTTTAGAGAATACATAGGAGCTGAGTTCAATGATGTCAAATTTTCCGACGTTCCGATTAACACAAATGTAGAAGAGTTTCACTTTCTCATGTCGTTTGCAATAGACTTCGACAGCTCCCGCCGTTGTTTCACTAATGGAGTATTCAACGTTTTCTGGGATTCCTATAATCTTAGCCCTTCCGCTGTTGCTGCCATTAAAAAGGATCATTCAAACGTGAGAGTGGGGGTAAGTCTTGGAGGAGACAGCGTGGGAGACTCAGGCTTTGTTTATTTCAAACCTTCTTCAATAGCTTCATGGGTTTCCAACGCAGAACGTTCACTCACAAAGCTCATAAAAACCTTCAATCTCGACGGCATCGACATCGATTACGAACACTTCGAGTCGGACCCGAACACGTTCGCTGAGTGCATAGGGCAGCTAATTAGACGGCTAAAGAAGAAGGGTGTCATCTCATTTGCTTCCATTGCCCCTTTTGACGACGCTGAAGTTCAGGCCCATTACTTAGCCTTGTGGAAAAGATACGGGCAGTTGATAGATTATGTTAATTTTCAATTCTATGCTTATGATAAGACCACCACAGTTCATCAGTTTATCAAACATTTCAAAGCTCAAAGCTCAAATTATGAAGGTGGTAGGATCCTGGCAAGCTTAGCCAGCGACGATAGCGGCGGATTGTTGCCAAAGAATGGGTTTTTTAAGGCATGTCGAAGGCTTAGAACGGACAAACTCCTCCATGGAATCTTTATTTGGTCTGCAGATGATTCACAAGCTCATGGTTTTAGGTATGAAAAGAAGGCACAAGCACTTCTACAAAGCCCCAACTACCACTATTGA

Coding sequence (CDS)

ATGGAAATGGATGGAATAATTGTTGTTCTTCTATTGATTCTGGTGGCTCCGCCTTCTAACGCGGCGGTGGTTGTACCGGCGACTGTGTTTAGAGAATACATAGGAGCTGAGTTCAATGATGTCAAATTTTCCGACGTTCCGATTAACACAAATGTAGAAGAGTTTCACTTTCTCATGTCGTTTGCAATAGACTTCGACAGCTCCCGCCGTTGTTTCACTAATGGAGTATTCAACGTTTTCTGGGATTCCTATAATCTTAGCCCTTCCGCTGTTGCTGCCATTAAAAAGGATCATTCAAACGTGAGAGTGGGGGTAAGTCTTGGAGGAGACAGCGTGGGAGACTCAGGCTTTGTTTATTTCAAACCTTCTTCAATAGCTTCATGGGTTTCCAACGCAGAACGTTCACTCACAAAGCTCATAAAAACCTTCAATCTCGACGGCATCGACATCGATTACGAACACTTCGAGTCGGACCCGAACACGTTCGCTGAGTGCATAGGGCAGCTAATTAGACGGCTAAAGAAGAAGGGTGTCATCTCATTTGCTTCCATTGCCCCTTTTGACGACGCTGAAGTTCAGGCCCATTACTTAGCCTTGTGGAAAAGATACGGGCAGTTGATAGATTATGTTAATTTTCAATTCTATGCTTATGATAAGACCACCACAGTTCATCAGTTTATCAAACATTTCAAAGCTCAAAGCTCAAATTATGAAGGTGGTAGGATCCTGGCAAGCTTAGCCAGCGACGATAGCGGCGGATTGTTGCCAAAGAATGGGTTTTTTAAGGCATGTCGAAGGCTTAGAACGGACAAACTCCTCCATGGAATCTTTATTTGGTCTGCAGATGATTCACAAGCTCATGGTTTTAGGTATGAAAAGAAGGCACAAGCACTTCTACAAAGCCCCAACTACCACTATTGA

Protein sequence

MEMDGIIVVLLLILVAPPSNAAVVVPATVFREYIGAEFNDVKFSDVPINTNVEEFHFLMSFAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLIKTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQAHYLALWKRYGQLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRILASLASDDSGGLLPKNGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQSPNYHY

Homology

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BLAST of CmaCh01G005770 vs. ExPASy Swiss-Prot
Match: Q9SLP4 (Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 2.3e-101
Identity = 185/297 (62.29%), Postives = 229/297 (77.10%), Query Frame = 0


Query: 10  LLLILVAPPSNAAVVVPATVFREYIGAEFNDVKFSDVPINTNVEEFHFLMSFAIDFDS-S 69
           LLL+  A  S    +  A VFREYIG++FNDVKFSDVPIN +V +FHF+++FAID+ S S
Sbjct: 9   LLLLFFALLSPLLPLTSALVFREYIGSQFNDVKFSDVPINPDV-DFHFILAFAIDYTSGS 68

Query: 70  RRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASW 129
               TNG F  FWD+ NLSPS VAA+K+ HSNV+V +SLGGDSVG    V+F PSS++SW
Sbjct: 69  SPTPTNGNFKPFWDTNNLSPSQVAAVKRTHSNVKVSLSLGGDSVGGKN-VFFSPSSVSSW 128

Query: 130 VSNAERSLTKLIKTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFD 189
           V NA  SLT++IK ++LDGIDIDYEHF+ DPNTFAECIGQL+ RLKK  V+SF SIAPFD
Sbjct: 129 VENAVSSLTRIIKQYHLDGIDIDYEHFKGDPNTFAECIGQLVTRLKKNEVVSFVSIAPFD 188

Query: 190 DAEVQAHYLALWKRYGQLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRILASLAS 249
           DA+VQ+HY ALW++YG  IDYVNFQFYAY   T+V QF+K+F+ QSSNY GG++L S ++
Sbjct: 189 DAQVQSHYQALWEKYGHQIDYVNFQFYAYSARTSVEQFLKYFEEQSSNYHGGKVLVSFST 248

Query: 250 DDSGGLLPKNGFFKACRRLRTDKLLHGIFIWSADDS--QAHGFRYEKKAQALLQSPN 304
           D SGGL P NGFF+AC  L+    LHGIF+WSADDS    + FRYE +AQ++L S N
Sbjct: 249 DSSGGLKPDNGFFRACSILKKQGKLHGIFVWSADDSLMSNNVFRYEMQAQSMLASVN 303

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BLAST of CmaCh01G005770 vs. ExPASy Swiss-Prot
Match: Q7M443 (Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 7.5e-100
Identity = 178/276 (64.49%), Postives = 219/276 (79.35%), Query Frame = 0


Query: 29  VFREYIGAEFNDVKFSDVPINTNVEEFHFLMSFAIDFDS-SRRCFTNGVFNVFWDSYNLS 88
           +FREYIGA+FNDVKFSDVPIN NV +FHF+++FAID+ S S    TNG FN FWD+ NLS
Sbjct: 2   LFREYIGAQFNDVKFSDVPINPNV-DFHFILAFAIDYTSGSSPTPTNGNFNPFWDTNNLS 61

Query: 89  PSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLIKTFNLDG 148
           PS VAAIK+ ++NV+V VSLGG+SVG    V+F PSS++SWV NA  SLTK+IK ++LDG
Sbjct: 62  PSQVAAIKRTYNNVKVSVSLGGNSVGGER-VFFNPSSVSSWVDNAVSSLTKIIKQYHLDG 121

Query: 149 IDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQAHYLALWKRYGQLI 208
           IDIDYEHF+ DPNTFAECIGQL+ RLKK GV+SF SIAPFDDA+VQ+HY ALW++YG  I
Sbjct: 122 IDIDYEHFKGDPNTFAECIGQLVTRLKKNGVVSFVSIAPFDDAQVQSHYQALWEKYGHQI 181

Query: 209 DYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRILASLASDDSGGLLPKNGFFKACRRL 268
           DYVNFQFY Y    +V QF+K+F+ Q SNY GG++L S ++D+SGGL P+NGFF AC  L
Sbjct: 182 DYVNFQFYVYSSRMSVEQFLKYFEMQRSNYPGGKVLVSFSTDNSGGLKPRNGFFDACSIL 241

Query: 269 RTDKLLHGIFIWSADDSQAHG--FRYEKKAQALLQS 302
           +    LHGIF+WSADDS      F+YE +AQ+LL S
Sbjct: 242 KKQGKLHGIFVWSADDSLMSNDVFKYEMQAQSLLAS 275

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BLAST of CmaCh01G005770 vs. ExPASy Swiss-Prot
Match: P39657 (RuBisCO-associated protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.1e-21
Identity = 65/188 (34.57%), Postives = 94/188 (50.00%), Query Frame = 0


Query: 29  VFREYIGAEFNDVKFSDVPINTNVEEFHFLMSFAIDFDSSRRCFTNGVFNVFWDSYNLSP 88
           VFRE+     +D  F +  I  N+ EF   +S A D+D +    TNG F  +WD+  ++P
Sbjct: 7   VFREFT----SDDSFLNQVIPENITEFQVTLSLARDYDGNNS--TNGKFIPYWDTEKVTP 66

Query: 89  SAVAAIKKDHS----NVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAERSLTKLIKTFN 148
             +   KK +      V+V VS+G  +     F     S+  +WVS A  SL  +IKT+N
Sbjct: 67  EVIKKFKKKYEPTALRVKVLVSIGNKN-KQFPFTIGSDSNSEAWVSEATASLKSIIKTYN 126

Query: 149 LDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQAHYLALWKRYG 208
           LDGID+ YE   ++   F   +G L+R LK+  +I+ AS A   DA     Y  L+  Y 
Sbjct: 127 LDGIDVSYEDIAANEADFVNSVGGLVRNLKQNKLITVASFATSADAANNKFYNLLYAEYA 186

Query: 209 QLIDYVNF 213
              D V F
Sbjct: 187 TFFDTVVF 187

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BLAST of CmaCh01G005770 vs. ExPASy TrEMBL
Match: A0A6J1GBP9 (chitinase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111452519 PE=3 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 3.3e-167
Identity = 295/304 (97.04%), Postives = 297/304 (97.70%), Query Frame = 0


Query: 3   MDGIIVVLLLILVAPPSNAAVVVPATVFREYIGAEFNDVKFSDVPINTNVEEFHFLMSFA 62
           MDGIIVVLLLILVAPPSN AVVVPA VFREYIGAEFNDVKFSDVPIN NVEEFHFL+SFA
Sbjct: 1   MDGIIVVLLLILVAPPSNTAVVVPAAVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFA 60

Query: 63  IDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKP 122
           IDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKP
Sbjct: 61  IDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKP 120

Query: 123 SSIASWVSNAERSLTKLIKTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFA 182
           SSIASWVSNAERSLTKLI TFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFA
Sbjct: 121 SSIASWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFA 180

Query: 183 SIAPFDDAEVQAHYLALWKRYGQLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRI 242
           SIAPFDDAEVQ HYLALWKRYG LIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRI
Sbjct: 181 SIAPFDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRI 240

Query: 243 LASLASDDSGGLLPKNGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQSP 302
           LASLASDDSGGLL K+GFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQSP
Sbjct: 241 LASLASDDSGGLLSKHGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQSP 300

Query: 303 NYHY 307
           NYHY
Sbjct: 301 NYHY 304

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BLAST of CmaCh01G005770 vs. ExPASy TrEMBL
Match: A0A0A0LV90 (Glyco_hydro_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G496300 PE=3 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 8.2e-134
Identity = 239/297 (80.47%), Postives = 267/297 (89.90%), Query Frame = 0


Query: 7   IVVLLLILVAPPSNAAVVVPATVFREYIGAEFNDVKFSDVPINTNVEEFHFLMSFAIDFD 66
           ++ LL +LVAPPS  A   PA VFREYIGAEFN+VKFSDVPI++NVEEFHFL+SFAIDFD
Sbjct: 15  LLFLLQLLVAPPSLMA-AGPANVFREYIGAEFNNVKFSDVPIHSNVEEFHFLLSFAIDFD 74

Query: 67  SSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIA 126
           +S R FTNG F+VFWDS NL+PSAVA+IKKDHSNVRVGVSLGGD+V + G V+FKPSSI 
Sbjct: 75  ASSRSFTNGAFDVFWDSDNLNPSAVASIKKDHSNVRVGVSLGGDTVDNGGSVFFKPSSIH 134

Query: 127 SWVSNAERSLTKLIKTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAP 186
           SWVSNAE SLTK+IKT+NLDGIDIDYEHF+SDP+TFAECIGQLI+RLKKKG+ISFASIAP
Sbjct: 135 SWVSNAEHSLTKIIKTYNLDGIDIDYEHFKSDPDTFAECIGQLIKRLKKKGIISFASIAP 194

Query: 187 FDDAEVQAHYLALWKRYGQLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRILASL 246
           FDD EVQ+HYLALWKRYG LIDYVNFQFYAYDK TT+ QFI+HFK Q SNYEGGRILASL
Sbjct: 195 FDDDEVQSHYLALWKRYGHLIDYVNFQFYAYDKGTTIGQFIQHFKDQMSNYEGGRILASL 254

Query: 247 ASDDSGGLLPKNGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQSPN 304
            SDDSGGL+PKNGFFKACRRL+ +KLL+GIFIWSADDSQA GF YEK AQ+LL  PN
Sbjct: 255 VSDDSGGLVPKNGFFKACRRLKKEKLLNGIFIWSADDSQAKGFDYEKTAQSLLAKPN 310

[Close]

BLAST of CmaCh01G005770 vs. ExPASy TrEMBL
Match: A0A6J1DUG9 (chitinase 2-like OS=Momordica charantia OX=3673 GN=LOC111023583 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 3.8e-131
Identity = 240/309 (77.67%), Postives = 268/309 (86.73%), Query Frame = 0


Query: 1   MEMDG------IIVVLLLILVAPPSNAAVVVPATVFREYIGAEFNDVKFSDVPINTNVEE 60
           MEMDG      I+V L L+L+ PPS+AA    A +FREYIGAEF DVKFSDVPIN +V E
Sbjct: 1   MEMDGSGIRAFILVALQLLLLFPPSHAA----AKLFREYIGAEFKDVKFSDVPINPDV-E 60

Query: 61  FHFLMSFAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGD 120
           FHFL+SFAIDFD+SRR FTNG+FNVFWDS+NL+PS V AIKKDHSNV+VG+S+GGD+V  
Sbjct: 61  FHFLLSFAIDFDASRRSFTNGIFNVFWDSHNLNPSDVVAIKKDHSNVKVGLSIGGDTV-P 120

Query: 121 SGFVYFKPSSIASWVSNAERSLTKLIKTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLK 180
           +GF YFKPSSI SWVSNAERSLTKLI  FNLD IDIDYEHF+SDPNTFAECIG+LI+RLK
Sbjct: 121 NGFAYFKPSSIDSWVSNAERSLTKLINAFNLDSIDIDYEHFKSDPNTFAECIGRLIKRLK 180

Query: 181 KKGVISFASIAPFDDAEVQAHYLALWKRYGQLIDYVNFQFYAYDKTTTVHQFIKHFKAQS 240
           KKG ISFASIAPFD AEVQ+HYLALW+ YG LIDYVNFQFYAYDKTTTV QFI+HFKAQ+
Sbjct: 181 KKGAISFASIAPFDKAEVQSHYLALWRSYGHLIDYVNFQFYAYDKTTTVPQFIQHFKAQT 240

Query: 241 SNYEGGRILASLASDDSGGLLPKNGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKK 300
           SNYEGGR+LASL SDDSGGLL +NGFF ACRRLR +KLLHGIF+WSADDS A+GF YEKK
Sbjct: 241 SNYEGGRVLASLVSDDSGGLLAENGFFTACRRLRAEKLLHGIFVWSADDSIANGFGYEKK 300

Query: 301 AQALLQSPN 304
           AQ LL  PN
Sbjct: 301 AQELLAMPN 303

[Close]

BLAST of CmaCh01G005770 vs. ExPASy TrEMBL
Match: A0A5A7SWP3 (Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00520 PE=3 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 4.2e-130
Identity = 233/298 (78.19%), Postives = 266/298 (89.26%), Query Frame = 0


Query: 7   IVVLLLILVAPPSNAAVVVPATVFREYIGAEFNDVKFSDVPINTNVEEFHFLMSFAIDFD 66
           ++ LL + VAPPS  A   PA VFREYIGAEFN+VKFSDVPI +N+EEFHFL+SFAIDFD
Sbjct: 15  LLFLLQLFVAPPSLMA-AGPANVFREYIGAEFNNVKFSDVPIRSNIEEFHFLLSFAIDFD 74

Query: 67  SSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIA 126
           +S R FTNG F+VFWDS NL+PSAVA+IKKDHSNVRVGVSLGGD+V + GFV+FKPSSI 
Sbjct: 75  ASSRSFTNGAFDVFWDSDNLNPSAVASIKKDHSNVRVGVSLGGDTVDNGGFVFFKPSSIH 134

Query: 127 SWVSNAERSLTKLIKTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAP 186
           SWVSNAE SLTK+I T+NLDGIDIDYEHF+SDP+TFAECIGQLI+RLKKKG+ISFASIAP
Sbjct: 135 SWVSNAEHSLTKIINTYNLDGIDIDYEHFKSDPDTFAECIGQLIKRLKKKGIISFASIAP 194

Query: 187 FDDAEVQAHYLALWKRYGQLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRILASL 246
           FDD EVQ+HYLALW+ YG LIDYVNFQFYAYDK TTV QFI+HFK Q SNYEGGR+LASL
Sbjct: 195 FDDDEVQSHYLALWRSYGHLIDYVNFQFYAYDKGTTVGQFIRHFKDQVSNYEGGRVLASL 254

Query: 247 ASDDS-GGLLPKNGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQSPN 304
           ASD+S GGL+P+NGFFKACRRL+ +KLL GIFIWSADDS+A GF YEK+AQ+LL +PN
Sbjct: 255 ASDNSAGGLVPENGFFKACRRLKREKLLDGIFIWSADDSKAKGFGYEKEAQSLLATPN 311

[Close]

BLAST of CmaCh01G005770 vs. ExPASy TrEMBL
Match: A0A1S3C5A3 (chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103497192 PE=3 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 4.2e-130
Identity = 233/298 (78.19%), Postives = 266/298 (89.26%), Query Frame = 0


Query: 7   IVVLLLILVAPPSNAAVVVPATVFREYIGAEFNDVKFSDVPINTNVEEFHFLMSFAIDFD 66
           ++ LL + VAPPS  A   PA VFREYIGAEFN+VKFSDVPI +N+EEFHFL+SFAIDFD
Sbjct: 15  LLFLLQLFVAPPSLMA-AGPANVFREYIGAEFNNVKFSDVPIRSNIEEFHFLLSFAIDFD 74

Query: 67  SSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIA 126
           +S R FTNG F+VFWDS NL+PSAVA+IKKDHSNVRVGVSLGGD+V + GFV+FKPSSI 
Sbjct: 75  ASSRSFTNGAFDVFWDSDNLNPSAVASIKKDHSNVRVGVSLGGDTVDNGGFVFFKPSSIH 134

Query: 127 SWVSNAERSLTKLIKTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAP 186
           SWVSNAE SLTK+I T+NLDGIDIDYEHF+SDP+TFAECIGQLI+RLKKKG+ISFASIAP
Sbjct: 135 SWVSNAEHSLTKIINTYNLDGIDIDYEHFKSDPDTFAECIGQLIKRLKKKGIISFASIAP 194

Query: 187 FDDAEVQAHYLALWKRYGQLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRILASL 246
           FDD EVQ+HYLALW+ YG LIDYVNFQFYAYDK TTV QFI+HFK Q SNYEGGR+LASL
Sbjct: 195 FDDDEVQSHYLALWRSYGHLIDYVNFQFYAYDKGTTVGQFIRHFKDQVSNYEGGRVLASL 254

Query: 247 ASDDS-GGLLPKNGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQSPN 304
           ASD+S GGL+P+NGFFKACRRL+ +KLL GIFIWSADDS+A GF YEK+AQ+LL +PN
Sbjct: 255 ASDNSAGGLVPENGFFKACRRLKREKLLDGIFIWSADDSKAKGFGYEKEAQSLLATPN 311

[Close]

BLAST of CmaCh01G005770 vs. NCBI nr
Match: KAG6607221.1 (hypothetical protein SDJN03_00563, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036906.1 hypothetical protein SDJN02_00526, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 598.2 bits (1541), Expect = 4.0e-167
Identity = 296/306 (96.73%), Postives = 298/306 (97.39%), Query Frame = 0


Query: 1   MEMDGIIVVLLLILVAPPSNAAVVVPATVFREYIGAEFNDVKFSDVPINTNVEEFHFLMS 60
           MEMDGIIVVLLLILVAPPSN AVVVPATVFREYIGAEFNDVKFSDVPIN NVEEFHFL+S
Sbjct: 1   MEMDGIIVVLLLILVAPPSNTAVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLS 60

Query: 61  FAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYF 120
           FAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYF
Sbjct: 61  FAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYF 120

Query: 121 KPSSIASWVSNAERSLTKLIKTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVIS 180
           KPSSIASWVSNAERSLTKLI TFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVIS
Sbjct: 121 KPSSIASWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVIS 180

Query: 181 FASIAPFDDAEVQAHYLALWKRYGQLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGG 240
           FASIAPFDDAEVQ HYLALWKRYG LIDYVNFQFYAYDKTTTVHQFIKHFKAQSS YE G
Sbjct: 181 FASIAPFDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDG 240

Query: 241 RILASLASDDSGGLLPKNGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQ 300
           RILASLASDDSGGLLPK+GFFKACRRLRTDKLLHGIFIWSADDSQA GFRYEKKAQALLQ
Sbjct: 241 RILASLASDDSGGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQ 300

Query: 301 SPNYHY 307
           SPNYHY
Sbjct: 301 SPNYHY 306

[Close]

BLAST of CmaCh01G005770 vs. NCBI nr
Match: XP_023524573.1 (chitinase 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 597.8 bits (1540), Expect = 5.2e-167
Identity = 295/305 (96.72%), Postives = 299/305 (98.03%), Query Frame = 0


Query: 1   MEMDGIIVVLLLILVAPPSNAAVVVPATVFREYIGAEFNDVKFSDVPINTNVEEFHFLMS 60
           MEMDGIIVVLLLILVAPPS AAVVVPATVFREYIGAEFNDVKFSDVPIN NVEEFHFL+S
Sbjct: 1   MEMDGIIVVLLLILVAPPSTAAVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLS 60

Query: 61  FAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYF 120
           FAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKK+HSNVRVGVSLGGDSVGDSGFVYF
Sbjct: 61  FAIDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKNHSNVRVGVSLGGDSVGDSGFVYF 120

Query: 121 KPSSIASWVSNAERSLTKLIKTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVIS 180
           KPSSIASWVSNAERSLTKLI TF LDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVIS
Sbjct: 121 KPSSIASWVSNAERSLTKLINTFKLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVIS 180

Query: 181 FASIAPFDDAEVQAHYLALWKRYGQLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGG 240
           FASIAPFDD EVQAHYLALWKRYG LIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGG
Sbjct: 181 FASIAPFDDTEVQAHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGG 240

Query: 241 RILASLASDDSGGLLPKNGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQ 300
           RILASLASDD+GGLLPK+GFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQ
Sbjct: 241 RILASLASDDTGGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQ 300

Query: 301 SPNYH 306
           SPNYH
Sbjct: 301 SPNYH 305

[Close]

BLAST of CmaCh01G005770 vs. NCBI nr
Match: XP_022949055.1 (chitinase 2-like [Cucurbita moschata])

HSP 1 Score: 597.4 bits (1539), Expect = 6.8e-167
Identity = 295/304 (97.04%), Postives = 297/304 (97.70%), Query Frame = 0


Query: 3   MDGIIVVLLLILVAPPSNAAVVVPATVFREYIGAEFNDVKFSDVPINTNVEEFHFLMSFA 62
           MDGIIVVLLLILVAPPSN AVVVPA VFREYIGAEFNDVKFSDVPIN NVEEFHFL+SFA
Sbjct: 1   MDGIIVVLLLILVAPPSNTAVVVPAAVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFA 60

Query: 63  IDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKP 122
           IDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKP
Sbjct: 61  IDFDSSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKP 120

Query: 123 SSIASWVSNAERSLTKLIKTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFA 182
           SSIASWVSNAERSLTKLI TFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFA
Sbjct: 121 SSIASWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFA 180

Query: 183 SIAPFDDAEVQAHYLALWKRYGQLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRI 242
           SIAPFDDAEVQ HYLALWKRYG LIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRI
Sbjct: 181 SIAPFDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRI 240

Query: 243 LASLASDDSGGLLPKNGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQSP 302
           LASLASDDSGGLL K+GFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQSP
Sbjct: 241 LASLASDDSGGLLSKHGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQSP 300

Query: 303 NYHY 307
           NYHY
Sbjct: 301 NYHY 304

[Close]

BLAST of CmaCh01G005770 vs. NCBI nr
Match: XP_038895814.1 (chitinase 2-like [Benincasa hispida])

HSP 1 Score: 486.9 bits (1252), Expect = 1.3e-133
Identity = 239/290 (82.41%), Postives = 262/290 (90.34%), Query Frame = 0


Query: 14  LVAPPSNAAVVVPATVFREYIGAEFNDVKFSDVPINTNVEEFHFLMSFAIDFDSSRRCFT 73
           +VAPPS+AA      VFREYIGAEF DVKFSDVPIN NVEEFHFL+SFAIDFDSSRR FT
Sbjct: 1   MVAPPSHAA-AGRGNVFREYIGAEFKDVKFSDVPINPNVEEFHFLLSFAIDFDSSRRSFT 60

Query: 74  NGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIASWVSNAE 133
           NGVFNVFWDS NLSPSAVA+IK+DHSNVRVGVSLGGDSV   G V+FKPSSIASWVSNAE
Sbjct: 61  NGVFNVFWDSDNLSPSAVASIKRDHSNVRVGVSLGGDSVDKGGSVFFKPSSIASWVSNAE 120

Query: 134 RSLTKLIKTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAPFDDAEVQ 193
            SLT+LI T+NLDGIDIDYEHF+SDP+TFA+CIGQLI RLKKKG+ISFASIAPFD AEVQ
Sbjct: 121 TSLTELINTYNLDGIDIDYEHFKSDPSTFAKCIGQLIGRLKKKGIISFASIAPFDKAEVQ 180

Query: 194 AHYLALWKRYGQLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRILASLASDDSGG 253
           +HYLALW+ YG LIDYVNFQFYAYDK TTV QFI+HFKAQ SNYEGGR+LASLASDDSGG
Sbjct: 181 SHYLALWRSYGHLIDYVNFQFYAYDKGTTVGQFIQHFKAQLSNYEGGRVLASLASDDSGG 240

Query: 254 LLPKNGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQSPN 304
           L+P NGFF+ACR+L+T+KLL GIFIWSADDSQ++GF YEKKAQALL  PN
Sbjct: 241 LVPDNGFFRACRKLKTEKLLDGIFIWSADDSQSNGFGYEKKAQALLAMPN 289

[Close]

BLAST of CmaCh01G005770 vs. NCBI nr
Match: KGN65683.1 (hypothetical protein Csa_019605 [Cucumis sativus])

HSP 1 Score: 486.5 bits (1251), Expect = 1.7e-133
Identity = 239/297 (80.47%), Postives = 267/297 (89.90%), Query Frame = 0


Query: 7   IVVLLLILVAPPSNAAVVVPATVFREYIGAEFNDVKFSDVPINTNVEEFHFLMSFAIDFD 66
           ++ LL +LVAPPS  A   PA VFREYIGAEFN+VKFSDVPI++NVEEFHFL+SFAIDFD
Sbjct: 15  LLFLLQLLVAPPSLMA-AGPANVFREYIGAEFNNVKFSDVPIHSNVEEFHFLLSFAIDFD 74

Query: 67  SSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIA 126
           +S R FTNG F+VFWDS NL+PSAVA+IKKDHSNVRVGVSLGGD+V + G V+FKPSSI 
Sbjct: 75  ASSRSFTNGAFDVFWDSDNLNPSAVASIKKDHSNVRVGVSLGGDTVDNGGSVFFKPSSIH 134

Query: 127 SWVSNAERSLTKLIKTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAP 186
           SWVSNAE SLTK+IKT+NLDGIDIDYEHF+SDP+TFAECIGQLI+RLKKKG+ISFASIAP
Sbjct: 135 SWVSNAEHSLTKIIKTYNLDGIDIDYEHFKSDPDTFAECIGQLIKRLKKKGIISFASIAP 194

Query: 187 FDDAEVQAHYLALWKRYGQLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRILASL 246
           FDD EVQ+HYLALWKRYG LIDYVNFQFYAYDK TT+ QFI+HFK Q SNYEGGRILASL
Sbjct: 195 FDDDEVQSHYLALWKRYGHLIDYVNFQFYAYDKGTTIGQFIQHFKDQMSNYEGGRILASL 254

Query: 247 ASDDSGGLLPKNGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQSPN 304
            SDDSGGL+PKNGFFKACRRL+ +KLL+GIFIWSADDSQA GF YEK AQ+LL  PN
Sbjct: 255 VSDDSGGLVPKNGFFKACRRLKKEKLLNGIFIWSADDSQAKGFDYEKTAQSLLAKPN 310

The following BLAST results are available for this feature:

BLAST of CmaCh01G005770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLP4	2.3e-101	62.29	Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1	[more]
Q7M443	7.5e-100	64.49	Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1	[more]
P39657	3.1e-21	34.57	RuBisCO-associated protein OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of CmaCh01G005770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBP9	3.3e-167	97.04	chitinase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111452519 PE=3 SV=1	[more]
A0A0A0LV90	8.2e-134	80.47	Glyco_hydro_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G496...	[more]
A0A6J1DUG9	3.8e-131	77.67	chitinase 2-like OS=Momordica charantia OX=3673 GN=LOC111023583 PE=4 SV=1	[more]
A0A5A7SWP3	4.2e-130	78.19	Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G0052...	[more]
A0A1S3C5A3	4.2e-130	78.19	chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103497192 PE=3 SV=1	[more]

BLAST of CmaCh01G005770 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607221.1	4.0e-167	96.73	hypothetical protein SDJN03_00563, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023524573.1	5.2e-167	96.72	chitinase 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949055.1	6.8e-167	97.04	chitinase 2-like [Cucurbita moschata]	[more]
XP_038895814.1	1.3e-133	82.41	chitinase 2-like [Benincasa hispida]	[more]
KGN65683.1	1.7e-133	80.47	hypothetical protein Csa_019605 [Cucumis sativus]	[more]

BLAST of CmaCh01G005770 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000677	Chitinase-like	PRINTS	PR00551	2SGLOBULIN	coord: 27..40 score: 46.43 coord: 74..89 score: 27.6 coord: 91..109 score: 40.35 coord: 262..281 score: 37.08
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 26..301 e-value: 1.5E-83 score: 282.6
None	No IPR available	PANTHER	PTHR46476	CHITINASE 2-LIKE	coord: 13..301
None	No IPR available	PANTHER	PTHR46476:SF4	2, PUTATIVE, EXPRESSED-RELATED	coord: 13..301
None	No IPR available	CDD	cd06544	GH18_narbonin	coord: 29..284 e-value: 3.96947E-123 score: 350.903
IPR001223	Glycoside hydrolase family 18, catalytic domain	PFAM	PF00704	Glyco_hydro_18	coord: 89..224 e-value: 1.0E-14 score: 55.0
IPR001223	Glycoside hydrolase family 18, catalytic domain	PROSITE	PS51910	GH18_2	coord: 28..306 score: 22.937147
IPR001579	Glycosyl hydrolases family 18 (GH18) active site	PROSITE	PS01095	GH18_1	coord: 145..153
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 28..299

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G005770.1	CmaCh01G005770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds