CmaCh01G004300 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTTCAAAGTCAAAACAATCAAACTCACCCAATATGAAGAAGAAGAAGATCTTGAGCTTAGTCATTTGGCTTCTCTTTCTAATGTCTCCCCTTTCCCTCTCTCTCTCTCATGCTCTCCTCCAAGGTATCTACACTTACTTTCCTTCCTTGCAATACAATATCCTTCCTATTCCCGATTTCATTCGTTACTTGTTTTGTAATCTTTGTAGATGGCACTGTCGAACCAGTAATACCTGGTGTAAACGTAGAACTTTCTAAATCATTACTCCGAGAGGTGACTGATCAAGCTATTAACTTTTTCTAATTTCGAAAGGAAATGACCCACTTATTATCGAATTTTGAATTAACAGGAAACCCTTGTGGGATTTGATGGCATTGGGTTGAGGAAAATGGGGAATGGAAGAAAGAGAATAATGAGGAATGATGAGAGAGATGATCAACAAGTTCAAGATAGCTCAAGAATTTCAGGTGCAAACCACTATGATAGCAACTTTGAAGATCAAAAGAAGGATTTTGGAGTCAATAGAAAAAATTTGGGTATCAAAAATTGTAAAAATGGTGATGCTAAGAAGCTCAATCTTGCTGGTTTTGTAACATTTGGTGCAGATTACAAAGGCCCTTTACACCATCCTCCTAAACATAACTAATCACTTAGTTATGTAGCTAGCTAGCTAGGGAAATGAGGAAGAAAAAAACACATTTTTTGTACCCTTTTTCATAGGATCTTTGTTTGGTTTCATGTTATATATATGATTATGAATGAGATTAATTTACAAATTTACACTACCATGAATTGTTCTTCCCTAAAGTTTCAATTTTTATGCAATAATTGCTTCAAAAAAAGTGTCCAAAATCAATACTTTTGTTTGCTGCAGGCAAGAACAAGTCTTTTCAAACATCTCAACCTAACCATCAGGTCATTTTCTTTCCCTCTCTCAAGATAATGATATCAAAGCCAGTTGAACTAATTTTGTTGTTTCTTTTACAGGAGAGTGTCAGCTCAACGGTATCAAAGAACTGGAGGCATTCAAAGAGGGTGTTGAAGAAACAGGAAGATACTCAAAGGCTTGTCAAGGCAGCGAGAGAGATAGCCAATTTGATGCACAGAGACTATAAGGATTGGGCTCACCGCAAGCCACCGATCAACAATTATGAACCTATGCATTAAGAGAGGGCATGCCCTTTTTTAGCTTACAATGCCATATAGATATGCACAAGCACAAGAACCATTAGTAGCATTATTGGATTGTTTGAAACAGATTTCTGTACCATATCAGGGAAGTCAATTAGATTTTAATATTTCTATTTGTATTAGGCGAATTAACGCACCGAAAATATTATGTTTCTCGTTTTCGACTCGATCACGACTTTGATTGTATAATCGACTGTAGTCATTTTAGCATGTTTTATTCT AATTTCAAAGTCAAAACAATCAAACTCACCCAATATGAAGAAGAAGAAGATCTTGAGCTTAGTCATTTGGCTTCTCTTTCTAATGTCTCCCCTTTCCCTCTCTCTCTCTCATGCTCTCCTCCAAGATGGCACTGTCGAACCAGTAATACCTGGTGTAAACGTAGAACTTTCTAAATCATTACTCCGAGAGGAAACCCTTGTGGGATTTGATGGCATTGGGTTGAGGAAAATGGGGAATGGAAGAAAGAGAATAATGAGGAATGATGAGAGAGATGATCAACAAGTTCAAGATAGCTCAAGAATTTCAGGCAAGAACAAGTCTTTTCAAACATCTCAACCTAACCATCAGGAGAGTGTCAGCTCAACGGTATCAAAGAACTGGAGGCATTCAAAGAGGGTGTTGAAGAAACAGGAAGATACTCAAAGGCTTGTCAAGGCAGCGAGAGAGATAGCCAATTTGATGCACAGAGACTATAAGGATTGGGCTCACCGCAAGCCACCGATCAACAATTATGAACCTATGCATTAAGAGAGGGCATGCCCTTTTTTAGCTTACAATGCCATATAGATATGCACAAGCACAAGAACCATTAGTAGCATTATTGGATTGTTTGAAACAGATTTCTGTACCATATCAGGGAAGTCAATTAGATTTTAATATTTCTATTTGTATTAGGCGAATTAACGCACCGAAAATATTATGTTTCTCGTTTTCGACTCGATCACGACTTTGATTGTATAATCGACTGTAGTCATTTTAGCATGTTTTATTCT ATGAAGAAGAAGAAGATCTTGAGCTTAGTCATTTGGCTTCTCTTTCTAATGTCTCCCCTTTCCCTCTCTCTCTCTCATGCTCTCCTCCAAGATGGCACTGTCGAACCAGTAATACCTGGTGTAAACGTAGAACTTTCTAAATCATTACTCCGAGAGGAAACCCTTGTGGGATTTGATGGCATTGGGTTGAGGAAAATGGGGAATGGAAGAAAGAGAATAATGAGGAATGATGAGAGAGATGATCAACAAGTTCAAGATAGCTCAAGAATTTCAGGCAAGAACAAGTCTTTTCAAACATCTCAACCTAACCATCAGGAGAGTGTCAGCTCAACGGTATCAAAGAACTGGAGGCATTCAAAGAGGGTGTTGAAGAAACAGGAAGATACTCAAAGGCTTGTCAAGGCAGCGAGAGAGATAGCCAATTTGATGCACAGAGACTATAAGGATTGGGCTCACCGCAAGCCACCGATCAACAATTATGAACCTATGCATTAA MKKKKILSLVIWLLFLMSPLSLSLSHALLQDGTVEPVIPGVNVELSKSLLREETLVGFDGIGLRKMGNGRKRIMRNDERDDQQVQDSSRISGKNKSFQTSQPNHQESVSSTVSKNWRHSKRVLKKQEDTQRLVKAAREIANLMHRDYKDWAHRKPPINNYEPMH Homology
BLAST of CmaCh01G004300 vs. ExPASy TrEMBL
Match: A0A6J1K9R9 (uncharacterized protein LOC111492947 OS=Cucurbita maxima OX=3661 GN=LOC111492947 PE=4 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 1.3e-82 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of CmaCh01G004300 vs. ExPASy TrEMBL
Match: A0A6J1GCE6 (uncharacterized protein LOC111452688 OS=Cucurbita moschata OX=3662 GN=LOC111452688 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 9.3e-68 Identity = 148/165 (89.70%), Postives = 152/165 (92.12%), Query Frame = 0
BLAST of CmaCh01G004300 vs. ExPASy TrEMBL
Match: A0A0A0L0U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G124880 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 6.1e-35 Identity = 105/191 (54.97%), Postives = 129/191 (67.54%), Query Frame = 0
BLAST of CmaCh01G004300 vs. ExPASy TrEMBL
Match: A0A5A7UKD7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold437G00200 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 2.0e-33 Identity = 104/189 (55.03%), Postives = 128/189 (67.72%), Query Frame = 0
BLAST of CmaCh01G004300 vs. ExPASy TrEMBL
Match: A0A1S3C168 (uncharacterized protein LOC103495712 OS=Cucumis melo OX=3656 GN=LOC103495712 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 2.0e-33 Identity = 104/189 (55.03%), Postives = 128/189 (67.72%), Query Frame = 0
BLAST of CmaCh01G004300 vs. NCBI nr
Match: XP_022998256.1 (uncharacterized protein LOC111492947 [Cucurbita maxima]) HSP 1 Score: 315.5 bits (807), Expect = 2.8e-82 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
BLAST of CmaCh01G004300 vs. NCBI nr
Match: XP_022949289.1 (uncharacterized protein LOC111452688 [Cucurbita moschata]) HSP 1 Score: 266.2 bits (679), Expect = 1.9e-67 Identity = 148/165 (89.70%), Postives = 152/165 (92.12%), Query Frame = 0
BLAST of CmaCh01G004300 vs. NCBI nr
Match: KAG7036774.1 (hypothetical protein SDJN02_00394, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 245.0 bits (624), Expect = 4.6e-61 Identity = 149/209 (71.29%), Postives = 151/209 (72.25%), Query Frame = 0
BLAST of CmaCh01G004300 vs. NCBI nr
Match: KAG6607083.1 (hypothetical protein SDJN03_00425, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 207.2 bits (526), Expect = 1.1e-49 Identity = 123/170 (72.35%), Postives = 131/170 (77.06%), Query Frame = 0
BLAST of CmaCh01G004300 vs. NCBI nr
Match: XP_011653405.2 (uncharacterized protein LOC105435212 [Cucumis sativus] >KGN53766.1 hypothetical protein Csa_015188 [Cucumis sativus]) HSP 1 Score: 157.1 bits (396), Expect = 1.3e-34 Identity = 105/191 (54.97%), Postives = 129/191 (67.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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