CmaCh01G003940 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G003940
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein rough sheath 2 homolog
Location	Cma_Chr01: 1994894 .. 1996048 (-)
RNA-Seq Expression	CmaCh01G003940
Synteny	CmaCh01G003940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGACCGCCAGCGCTGGCAGCCGGAAGAAGACGCACTCCTACGAGCCTACGTCAAGCAATATGGCCCTAAAGAATGGAATCTCATCTCTCAGCGTATGGGGAAACCTCTCCATCGCGATCCTAAATCCTGTCTGGAGCGCTGGAAGAATTACCTTAAACCTGGCTTGAAGAAAGGCTCCCTCTCTCCCGAGGAGCAGACTCTCGTCATCTCTCTTCAGGCTAAGTACGGCAATAAGTGGAAGAAGATCGCTGCCGAGGTTCCCGGCCGTACGGCCAAGCGCCTCGGCAAGTGGTGGGAGGTTTTTAAAGAGAAGCAACTTAAGAAGTTGCAGAAGGCGCAAAACCTAACGCAGAGGCGCGATTACCAAAATTCCGACGGGAATCTTTCGATCTCCGGTGTTTCCTCGCCGGAGAAGGCGCTACAAGGTCCGTACGATCATATTTTGGAAACCTTCGCTGAGAAGTACGTCCAGCCGAAGCTCTACTCCACCGCGTTTCAATCTCCTCCTCCTCCCCCGCCGTTGGCCAACTTGATGCCTCGCCTTCCCGTCCCCGACGCTGATCCGGTCCTCTCGCTCGGATCCGTCAACTCTACGACGTCGTCTTCTAACGTCCTTCCTCTGTGGATGAACGTCAACTCCACCAGCACCGCTTCGTCTTCCACCTCGTCGACCACGCCGTCGCCATCGGTGAGTCTCACGCTATCTCCCTCCGAACCGGTCGTTCTCGACTCGGAAATGAACCGATTGTTACCGGTTCAGCAGATGGGAGCCTTAGTCCTATACTGCAAGGAGTTGGAAGAAGGGCGCCAGATTTGGCTTCAACACAAGAAGGAGGCGACATGGCGACTGAATCGATTAGAGCAACAGCTGGAATCGGAGAAAGCGAGAAAGAAGCGAGAGAAAATGGAGGAGATGGAAGCGAAGATACGGAGGTTGAGGGAGGAAGAAATGGCGTATTTGGGAAGAATCGAAAGCGATTACAGAGAGCAAGTAAGTGCTATGCGAAGAGACGCAGAGAACAAAGAGGCAAAGCTGCTGGAAGCCTGGTGCAGCAAGCATACGAAATTAACGAAGCTTGTGGAACAAATTGGAAATCAGGGTCAAGGGTTGGTTGTTGTAGCTGGGAATTCGAAGGATATGATCCATTGA

mRNA sequence

ATGAAGGACCGCCAGCGCTGGCAGCCGGAAGAAGACGCACTCCTACGAGCCTACGTCAAGCAATATGGCCCTAAAGAATGGAATCTCATCTCTCAGCGTATGGGGAAACCTCTCCATCGCGATCCTAAATCCTGTCTGGAGCGCTGGAAGAATTACCTTAAACCTGGCTTGAAGAAAGGCTCCCTCTCTCCCGAGGAGCAGACTCTCGTCATCTCTCTTCAGGCTAAGTACGGCAATAAGTGGAAGAAGATCGCTGCCGAGGTTCCCGGCCGTACGGCCAAGCGCCTCGGCAAGTGGTGGGAGGTTTTTAAAGAGAAGCAACTTAAGAAGTTGCAGAAGGCGCAAAACCTAACGCAGAGGCGCGATTACCAAAATTCCGACGGGAATCTTTCGATCTCCGGTGTTTCCTCGCCGGAGAAGGCGCTACAAGGTCCGTACGATCATATTTTGGAAACCTTCGCTGAGAAGTACGTCCAGCCGAAGCTCTACTCCACCGCGTTTCAATCTCCTCCTCCTCCCCCGCCGTTGGCCAACTTGATGCCTCGCCTTCCCGTCCCCGACGCTGATCCGGTCCTCTCGCTCGGATCCGTCAACTCTACGACGTCGTCTTCTAACGTCCTTCCTCTGTGGATGAACGTCAACTCCACCAGCACCGCTTCGTCTTCCACCTCGTCGACCACGCCGTCGCCATCGGTGAGTCTCACGCTATCTCCCTCCGAACCGGTCGTTCTCGACTCGGAAATGAACCGATTGTTACCGGTTCAGCAGATGGGAGCCTTAGTCCTATACTGCAAGGAGTTGGAAGAAGGGCGCCAGATTTGGCTTCAACACAAGAAGGAGGCGACATGGCGACTGAATCGATTAGAGCAACAGCTGGAATCGGAGAAAGCGAGAAAGAAGCGAGAGAAAATGGAGGAGATGGAAGCGAAGATACGGAGGTTGAGGGAGGAAGAAATGGCGTATTTGGGAAGAATCGAAAGCGATTACAGAGAGCAAGTAAGTGCTATGCGAAGAGACGCAGAGAACAAAGAGGCAAAGCTGCTGGAAGCCTGGTGCAGCAAGCATACGAAATTAACGAAGCTTGTGGAACAAATTGGAAATCAGGGTCAAGGGTTGGTTGTTGTAGCTGGGAATTCGAAGGATATGATCCATTGA

Coding sequence (CDS)

ATGAAGGACCGCCAGCGCTGGCAGCCGGAAGAAGACGCACTCCTACGAGCCTACGTCAAGCAATATGGCCCTAAAGAATGGAATCTCATCTCTCAGCGTATGGGGAAACCTCTCCATCGCGATCCTAAATCCTGTCTGGAGCGCTGGAAGAATTACCTTAAACCTGGCTTGAAGAAAGGCTCCCTCTCTCCCGAGGAGCAGACTCTCGTCATCTCTCTTCAGGCTAAGTACGGCAATAAGTGGAAGAAGATCGCTGCCGAGGTTCCCGGCCGTACGGCCAAGCGCCTCGGCAAGTGGTGGGAGGTTTTTAAAGAGAAGCAACTTAAGAAGTTGCAGAAGGCGCAAAACCTAACGCAGAGGCGCGATTACCAAAATTCCGACGGGAATCTTTCGATCTCCGGTGTTTCCTCGCCGGAGAAGGCGCTACAAGGTCCGTACGATCATATTTTGGAAACCTTCGCTGAGAAGTACGTCCAGCCGAAGCTCTACTCCACCGCGTTTCAATCTCCTCCTCCTCCCCCGCCGTTGGCCAACTTGATGCCTCGCCTTCCCGTCCCCGACGCTGATCCGGTCCTCTCGCTCGGATCCGTCAACTCTACGACGTCGTCTTCTAACGTCCTTCCTCTGTGGATGAACGTCAACTCCACCAGCACCGCTTCGTCTTCCACCTCGTCGACCACGCCGTCGCCATCGGTGAGTCTCACGCTATCTCCCTCCGAACCGGTCGTTCTCGACTCGGAAATGAACCGATTGTTACCGGTTCAGCAGATGGGAGCCTTAGTCCTATACTGCAAGGAGTTGGAAGAAGGGCGCCAGATTTGGCTTCAACACAAGAAGGAGGCGACATGGCGACTGAATCGATTAGAGCAACAGCTGGAATCGGAGAAAGCGAGAAAGAAGCGAGAGAAAATGGAGGAGATGGAAGCGAAGATACGGAGGTTGAGGGAGGAAGAAATGGCGTATTTGGGAAGAATCGAAAGCGATTACAGAGAGCAAGTAAGTGCTATGCGAAGAGACGCAGAGAACAAAGAGGCAAAGCTGCTGGAAGCCTGGTGCAGCAAGCATACGAAATTAACGAAGCTTGTGGAACAAATTGGAAATCAGGGTCAAGGGTTGGTTGTTGTAGCTGGGAATTCGAAGGATATGATCCATTGA

Protein sequence

MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKGSLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQRRDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPPPLANLMPRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSEPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKKREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTKLVEQIGNQGQGLVVVAGNSKDMIH

Homology

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BLAST of CmaCh01G003940 vs. ExPASy Swiss-Prot
Match: O80931 (Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 8.5e-77
Identity = 182/393 (46.31%), Postives = 236/393 (60.05%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRW  EEDALLRAYV+Q+GP+EW+L+S+RM KPL+RD KSCLERWKNYLKPG+KKG
Sbjct: 1   MKERQRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SL+ EEQ LVI LQ K+GNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ ++ +++    + 
Sbjct: 61  SLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEKESNKRVEP 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPPPLANLM 180
            D                    +  YD ILE+FAEK V+ +       +      +AN  
Sbjct: 121 ID--------------------ESKYDRILESFAEKLVKERSNVVPAAAAAATVVMANSN 180

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPS- 240
                        L S       + V+P W+     +T+++  +     PSV+LTLSPS 
Sbjct: 181 GGF----------LHSEQQVQPPNPVIPPWL-----ATSNNGNNVVARPPSVTLTLSPST 240

Query: 241 ----------------EP---------VVLDSEMNRLLPVQQ---MGALVLYCKELEEGR 300
                           +P         +VL S M       +   +  LV  C+ELEEG 
Sbjct: 241 VAAAAPQPPIPWLQQQQPERAENGPGGLVLGSMMPSCSGSSESVFLSELVECCRELEEGH 300

Query: 301 QIWLQHKKEATWRLNRLEQQLESEKARKKREKMEEMEAKIRRLREEEMAYLGRIESDYRE 360
           + W  HKKEA WRL RLE QLESEK  ++REKMEE+EAK++ LREE+   + +IE +YRE
Sbjct: 301 RAWADHKKEAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYRE 358

Query: 361 QVSAMRRDAENKEAKLLEAWCSKHTKLTKLVEQ 365
           Q+  +RRDAE K+ KL + W S+H +LTK +EQ
Sbjct: 361 QLVGLRRDAEAKDQKLADQWTSRHIRLTKFLEQ 358

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BLAST of CmaCh01G003940 vs. ExPASy Swiss-Prot
Match: Q94IB1 (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 PE=2 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.1e-75
Identity = 164/365 (44.93%), Postives = 230/365 (63.01%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60
           M++RQRW+PEEDA+L AYV+QYGP+EW+L+SQRM +PLHRD KSCLERWKNYL+PG+KKG
Sbjct: 6   MRERQRWRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKG 65

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SL+ +EQ LVI LQAK+GNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ ++L   ++  +R
Sbjct: 66  SLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREL---RDRDRR 125

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPPPLANLM 180
           R     DG+              G YD +LE FA+K V                      
Sbjct: 126 RLPPPLDGD--------ERGCAGGRYDWLLEDFADKLVNDH------------------- 185

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240
                            +    ++ +LP WM+ + +S++S S + +  S +V+   +   
Sbjct: 186 -----------------HRRMMAAPILPPWMSSSPSSSSSPSVTLSLASAAVAPAPAAPP 245

Query: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK 300
           P         ++  + M      C+E+EEG++ W  H+KEA WR+ R+E QLE+E+A ++
Sbjct: 246 PTWGGGGGGEVVVAELMEC----CREMEEGQRAWAAHRKEAAWRMKRVEMQLETERACRR 305

Query: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360
           RE  EE EAK+R LREE+ A + R+E++YRE+++ +RRDAE KE K+ E W +KH +L K
Sbjct: 306 REATEEFEAKMRALREEQAAAVERVEAEYREKMAGLRRDAEAKEQKMAEQWAAKHARLAK 319

Query: 361 LVEQI 366
            ++Q+
Sbjct: 366 FLDQV 319

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BLAST of CmaCh01G003940 vs. ExPASy Swiss-Prot
Match: Q9S7B2 (Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 8.0e-75
Identity = 180/387 (46.51%), Postives = 231/387 (59.69%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRW+PEEDA+LRAYV+QYGP+EW+L+SQRM   L RD KSCLERWKNYL+PG+KKG
Sbjct: 1   MKERQRWRPEEDAVLRAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SL+ EEQ LVI LQAK+GNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ ++L+ ++     
Sbjct: 61  SLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELRDSRRPPPE 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYV---------------------Q 180
                           SP++  +G Y+ +LE FAEK V                      
Sbjct: 121 ---------------PSPDE--RGRYEWLLENFAEKLVGERPQQAAAAPSPLLMAAPVLP 180

Query: 181 PKLYSTAFQSPPPPPPLANLMPRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTA 240
           P L S A  +      +A+  PR P P     LSL S           P WM       A
Sbjct: 181 PWLSSNAGPAAAAAAAVAHPPPRPPSPSV--TLSLASAAVAPGPPAPAP-WM---PDRAA 240

Query: 241 SSSTSSTTPSPSVSLTLSPSEPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKK 300
           + +     PSPS     +P    V+D         Q +  L   C+ELEEGR+ W  H++
Sbjct: 241 ADAAPYGFPSPSQHGGAAPPGMAVVDG--------QALAELAECCRELEEGRRAWAAHRR 300

Query: 301 EATWRLNRLEQQLESEKARKKREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRD 360
           EA WRL R+EQQLE E+  ++RE  EE EAK+R +R E+ A   R+E D+RE+V+ +RRD
Sbjct: 301 EAAWRLKRVEQQLEMEREMRRREVWEEFEAKMRTMRLEQAAAAERVERDHREKVAELRRD 356

Query: 361 AENKEAKLLEAWCSKHTKLTKLVEQIG 367
           A+ KE K+ E W +KH ++ K VEQ+G
Sbjct: 361 AQVKEEKMAEQWAAKHARVAKFVEQMG 356

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BLAST of CmaCh01G003940 vs. ExPASy Swiss-Prot
Match: P81392 (Myb-related protein 306 OS=Antirrhinum majus OX=4151 GN=MYB306 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 6.6e-21
Identity = 84/248 (33.87%), Postives = 126/248 (50.81%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W PEED +L +Y++++GP  W  I    G  L R  KSC  RW NYL+PG+K+G  +  E
Sbjct: 17  WTPEEDIILVSYIQEHGPGNWRAIPSNTG--LLRCSKSCRLRWTNYLRPGIKRGDFTEHE 76

Query: 67  QTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQRRDYQNS 126
           + ++I LQA  GN+W  IA+ +P RT   +  +W    +K+L+KLQ  +N       +  
Sbjct: 77  EKMIIHLQALLGNRWAAIASYLPHRTDNDIKNYWNTHLKKKLEKLQSPEN------GKCQ 136

Query: 127 DGNLSISGVSSPEKALQGPYDHILET---FAEKYVQPKLYSTAFQSPPPPPPLANLMPRL 186
           DGN   S V S +   +G ++  L+T    A++ +   L      S    P L+ +    
Sbjct: 137 DGN---SSVDSDKSVSKGQWERRLQTDIHMAKQALCDALSLDKTSSSTDDPKLSTVQTTQ 196

Query: 187 PVPDADPVLSLGSVNSTTSSSNVLPLW-----MNVNSTSTASSSTSSTTP--SPSVSL-T 244
           P P         + +S  + + +L  W     +N +STS A SS S+TT    PSV L T
Sbjct: 197 PRP-----FQASTYSSAENIARLLENWKKKSPVNASSTSQAGSSESTTTSFNYPSVCLST 248

[Close]

BLAST of CmaCh01G003940 vs. ExPASy Swiss-Prot
Match: Q10MB4 (Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.8e-19
Identity = 47/119 (39.50%), Postives = 72/119 (60.50%), Query Frame = 0


Query: 4   RQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKGSLS 63
           R  W  EED LL  Y+  +G   WN +++  G  L R  KSC  RW NYL+P L++G+++
Sbjct: 22  RGPWTVEEDLLLVNYIAAHGEGRWNSLARSAG--LKRTGKSCRLRWLNYLRPDLRRGNIT 81

Query: 64  PEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQRRD 123
           P+EQ L++ L +++GN+W KIA  +PGRT   +  +W    +K  K+L+   N  Q +D
Sbjct: 82  PQEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQQFKD 138

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BLAST of CmaCh01G003940 vs. ExPASy TrEMBL
Match: A0A6J1KCH4 (protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111492624 PE=4 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 6.7e-210
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPPPLANLM 180
           RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPPPLANLM
Sbjct: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPPPLANLM 180

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240
           PRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE
Sbjct: 181 PRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240

Query: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK 300
           PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK
Sbjct: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK 300

Query: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360
           REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK
Sbjct: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360

Query: 361 LVEQIGNQGQGLVVVAGNSKDMIH 385
           LVEQIGNQGQGLVVVAGNSKDMIH
Sbjct: 361 LVEQIGNQGQGLVVVAGNSKDMIH 384

[Close]

BLAST of CmaCh01G003940 vs. ExPASy TrEMBL
Match: A0A6J1GCE3 (protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111452685 PE=4 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 1.7e-205
Identity = 379/385 (98.44%), Postives = 381/385 (98.96%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPL+RDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPPPLANLM 180
           RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYS AFQSPPPPPPLAN+M
Sbjct: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240
           PRLPVPDADPVLSLGSVNSTTSSS VLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE
Sbjct: 181 PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240

Query: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK 300
           PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRL RLEQQLESEKARKK
Sbjct: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEKARKK 300

Query: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360
           REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK
Sbjct: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360

Query: 361 LVEQIGNQGQGLVVV-AGNSKDMIH 385
           LVEQIGNQGQGLVVV AGNSKDMIH
Sbjct: 361 LVEQIGNQGQGLVVVAAGNSKDMIH 385

[Close]

BLAST of CmaCh01G003940 vs. ExPASy TrEMBL
Match: A0A6J1FAF4 (protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111442290 PE=4 SV=1)

HSP 1 Score: 646.0 bits (1665), Expect = 1.0e-181
Identity = 330/384 (85.94%), Postives = 359/384 (93.49%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKP LKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPDLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLSP+EQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVF+EKQLK+LQK QNLTQR
Sbjct: 61  SLSPDEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFREKQLKQLQKTQNLTQR 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPPPLANLM 180
           RDYQNSDGN+ + GVSSPEKA+QGPYDHILETFAEKYVQPK+Y+ AFQSPPPP       
Sbjct: 121 RDYQNSDGNIPVVGVSSPEKAVQGPYDHILETFAEKYVQPKIYAAAFQSPPPP------- 180

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240
           PRL VP+ADPVLSLGSV+STTSS  VLPLWMNVNSTSTASSST+STTPSPSVSLTLSPSE
Sbjct: 181 PRLSVPEADPVLSLGSVSSTTSSPTVLPLWMNVNSTSTASSSTASTTPSPSVSLTLSPSE 240

Query: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK 300
           P +L+SE+NR+LPVQQMGALV YCK+LEEGRQ W+QHKKEATWRLNRLEQQLESEKARKK
Sbjct: 241 PAILESEVNRILPVQQMGALVQYCKDLEEGRQNWVQHKKEATWRLNRLEQQLESEKARKK 300

Query: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360
           REKMEEMEAKI+RLREEEMAYLGRIESDYREQ+SA++RDA++KEAKL+E+WCSKH KL K
Sbjct: 301 REKMEEMEAKIQRLREEEMAYLGRIESDYREQLSALQRDADSKEAKLVESWCSKHAKLAK 360

Query: 361 LVEQIGNQGQGLVVVAGNSKDMIH 385
           LVE+ G QG GLV+V GNS D++H
Sbjct: 361 LVEKYGVQGHGLVMVTGNSNDIVH 377

[Close]

BLAST of CmaCh01G003940 vs. ExPASy TrEMBL
Match: A0A6J1IZB3 (protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482044 PE=4 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 2.9e-181
Identity = 330/384 (85.94%), Postives = 358/384 (93.23%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLSP+EQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLK+LQK QNLTQR
Sbjct: 61  SLSPDEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKTQNLTQR 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPPPLANLM 180
            DYQNSDGN+ I GVSSPEKA+QGPYDHILETFAEKYVQPK+Y+ AFQSPPPPPP     
Sbjct: 121 HDYQNSDGNIPIVGVSSPEKAVQGPYDHILETFAEKYVQPKIYAAAFQSPPPPPP----P 180

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240
           PRL VP+ADPVLSLGSV+STTSS  VLPLWMN NSTSTASSST STTPSPSVSLTLSPSE
Sbjct: 181 PRLSVPEADPVLSLGSVSSTTSSPTVLPLWMNANSTSTASSSTVSTTPSPSVSLTLSPSE 240

Query: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK 300
           P + ++E+NR+LPVQQMGALV YCK+LEEGRQ W+QHKKEATWRLNRLE+QLESEKARKK
Sbjct: 241 PAINETEVNRILPVQQMGALVQYCKDLEEGRQSWVQHKKEATWRLNRLEKQLESEKARKK 300

Query: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360
           REKMEEMEAKI+RLREEE AYLGRIESDYREQ+SA++RDA++KEAKL+E+WCSKH KL K
Sbjct: 301 REKMEEMEAKIQRLREEESAYLGRIESDYREQLSALQRDADSKEAKLVESWCSKHAKLAK 360

Query: 361 LVEQIGNQGQGLVVVAGNSKDMIH 385
           LVE+ G QG GLV+V GNSKD++H
Sbjct: 361 LVEKYGVQGHGLVMVTGNSKDIVH 380

[Close]

BLAST of CmaCh01G003940 vs. ExPASy TrEMBL
Match: A0A5D3CNU9 (Transcription factor AS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold90G00170 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 8.7e-149
Identity = 294/385 (76.36%), Postives = 322/385 (83.64%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLIS RM  PLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLSPEEQ+LVISLQAKYGNKWKKIAAEVPGRT KRLGKWWEVFKEKQLK+L KA NLTQ 
Sbjct: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQ- 120

Query: 121 RDYQNSDGNLSIS-GVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPPPLANL 180
               + D NL IS  VSSPEKALQGPYDHILETFAEKYVQPKLY         P P    
Sbjct: 121 ---SSLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLY---------PHP---- 180

Query: 181 MPRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPS 240
              +P+PDADP+LSLGSV STTSSS +LPLWMNVNSTSTASSST STTPSPSVSLTLSPS
Sbjct: 181 ---IPIPDADPLLSLGSVTSTTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPS 240

Query: 241 EPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARK 300
           EP  L+SE+NR+      GALV YCKE+EEGRQ W+QHKKEA+WRLNRLEQQLESEKARK
Sbjct: 241 EPGCLESEVNRI------GALVQYCKEVEEGRQSWVQHKKEASWRLNRLEQQLESEKARK 300

Query: 301 KREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLT 360
           KREKMEEMEAKI+RLREEE  YLG IE DY+EQ++A++R+A+ KEAKL+E WC+KH+KL 
Sbjct: 301 KREKMEEMEAKIQRLREEERVYLGGIERDYKEQLNALQREADCKEAKLVEDWCNKHSKLV 354

Query: 361 KLVEQIGNQGQGLVVVAGNSKDMIH 385
           KLVE+ G  G     + G SKD++H
Sbjct: 361 KLVEKFGGHG-----LLGVSKDIVH 354

[Close]

BLAST of CmaCh01G003940 vs. NCBI nr
Match: XP_022997764.1 (protein rough sheath 2 homolog [Cucurbita maxima])

HSP 1 Score: 739.6 bits (1908), Expect = 1.4e-209
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPPPLANLM 180
           RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPPPLANLM
Sbjct: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPPPLANLM 180

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240
           PRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE
Sbjct: 181 PRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240

Query: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK 300
           PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK
Sbjct: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK 300

Query: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360
           REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK
Sbjct: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360

Query: 361 LVEQIGNQGQGLVVVAGNSKDMIH 385
           LVEQIGNQGQGLVVVAGNSKDMIH
Sbjct: 361 LVEQIGNQGQGLVVVAGNSKDMIH 384

[Close]

BLAST of CmaCh01G003940 vs. NCBI nr
Match: KAG7036747.1 (Transcription factor AS1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 729.6 bits (1882), Expect = 1.4e-206
Identity = 381/385 (98.96%), Postives = 382/385 (99.22%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPPPLANLM 180
           RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYS AFQSPPPPPPLAN+M
Sbjct: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240
           PRLPVPDADPVLSLGSVNSTTSSS VLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE
Sbjct: 181 PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240

Query: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK 300
           PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK
Sbjct: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK 300

Query: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360
           REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK
Sbjct: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360

Query: 361 LVEQIGNQGQGLVVV-AGNSKDMIH 385
           LVEQIGNQGQGLVVV AGNSKDMIH
Sbjct: 361 LVEQIGNQGQGLVVVAAGNSKDMIH 385

[Close]

BLAST of CmaCh01G003940 vs. NCBI nr
Match: XP_022949284.1 (protein rough sheath 2 homolog [Cucurbita moschata])

HSP 1 Score: 724.9 bits (1870), Expect = 3.5e-205
Identity = 379/385 (98.44%), Postives = 381/385 (98.96%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPL+RDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLYRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPPPLANLM 180
           RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYS AFQSPPPPPPLAN+M
Sbjct: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240
           PRLPVPDADPVLSLGSVNSTTSSS VLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE
Sbjct: 181 PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240

Query: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK 300
           PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRL RLEQQLESEKARKK
Sbjct: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLTRLEQQLESEKARKK 300

Query: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360
           REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK
Sbjct: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360

Query: 361 LVEQIGNQGQGLVVV-AGNSKDMIH 385
           LVEQIGNQGQGLVVV AGNSKDMIH
Sbjct: 361 LVEQIGNQGQGLVVVAAGNSKDMIH 385

[Close]

BLAST of CmaCh01G003940 vs. NCBI nr
Match: XP_023525837.1 (protein rough sheath 2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 719.5 bits (1856), Expect = 1.5e-203
Identity = 379/386 (98.19%), Postives = 380/386 (98.45%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLS EEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR
Sbjct: 61  SLSAEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQS-PPPPPPLANL 180
           RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYS AFQS PPPPPPLAN+
Sbjct: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPPLANV 180

Query: 181 MPRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPS 240
           MPRLPVPDADPVLSLGSVNSTTSSS VLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPS
Sbjct: 181 MPRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPS 240

Query: 241 EPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARK 300
           EPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQ WLQHKKEATWRLNRLEQQLESEKARK
Sbjct: 241 EPVVLDSEMNRLLPVQQMGALVLYCKELEEGRQSWLQHKKEATWRLNRLEQQLESEKARK 300

Query: 301 KREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLT 360
           KREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLT
Sbjct: 301 KREKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLT 360

Query: 361 KLVEQIGNQGQGLVVV-AGNSKDMIH 385
           KLVEQIGNQGQGLVVV AGNSKDMIH
Sbjct: 361 KLVEQIGNQGQGLVVVAAGNSKDMIH 386

[Close]

BLAST of CmaCh01G003940 vs. NCBI nr
Match: KAG6607046.1 (Transcription factor AS1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 672.2 bits (1733), Expect = 2.7e-189
Identity = 356/385 (92.47%), Postives = 357/385 (92.73%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR
Sbjct: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPPPLANLM 180
           RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYS AFQSPPPPPPLAN+M
Sbjct: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSAAFQSPPPPPPLANVM 180

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPSE 240
           PRLPVPDADPVLSLGSVNSTTSSS VLPLWMNVNSTSTASSSTSSTTPSPS         
Sbjct: 181 PRLPVPDADPVLSLGSVNSTTSSSTVLPLWMNVNSTSTASSSTSSTTPSPS--------- 240

Query: 241 PVVLDSEMNRLLPVQQMGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK 300
                           MGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK
Sbjct: 241 ----------------MGALVLYCKELEEGRQIWLQHKKEATWRLNRLEQQLESEKARKK 300

Query: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360
           REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK
Sbjct: 301 REKMEEMEAKIRRLREEEMAYLGRIESDYREQVSAMRRDAENKEAKLLEAWCSKHTKLTK 360

Query: 361 LVEQIGNQGQGLVVV-AGNSKDMIH 385
           LVEQIGNQGQGLVVV AGNSKDMIH
Sbjct: 361 LVEQIGNQGQGLVVVAAGNSKDMIH 360

[Close]

BLAST of CmaCh01G003940 vs. TAIR 10
Match: AT2G37630.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 288.9 bits (738), Expect = 6.1e-78
Identity = 182/393 (46.31%), Postives = 236/393 (60.05%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRW  EEDALLRAYV+Q+GP+EW+L+S+RM KPL+RD KSCLERWKNYLKPG+KKG
Sbjct: 1   MKERQRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKG 60

Query: 61  SLSPEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQR 120
           SL+ EEQ LVI LQ K+GNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ ++ +++    + 
Sbjct: 61  SLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEKESNKRVEP 120

Query: 121 RDYQNSDGNLSISGVSSPEKALQGPYDHILETFAEKYVQPKLYSTAFQSPPPPPPLANLM 180
            D                    +  YD ILE+FAEK V+ +       +      +AN  
Sbjct: 121 ID--------------------ESKYDRILESFAEKLVKERSNVVPAAAAAATVVMANSN 180

Query: 181 PRLPVPDADPVLSLGSVNSTTSSSNVLPLWMNVNSTSTASSSTSSTTPSPSVSLTLSPS- 240
                        L S       + V+P W+     +T+++  +     PSV+LTLSPS 
Sbjct: 181 GGF----------LHSEQQVQPPNPVIPPWL-----ATSNNGNNVVARPPSVTLTLSPST 240

Query: 241 ----------------EP---------VVLDSEMNRLLPVQQ---MGALVLYCKELEEGR 300
                           +P         +VL S M       +   +  LV  C+ELEEG 
Sbjct: 241 VAAAAPQPPIPWLQQQQPERAENGPGGLVLGSMMPSCSGSSESVFLSELVECCRELEEGH 300

Query: 301 QIWLQHKKEATWRLNRLEQQLESEKARKKREKMEEMEAKIRRLREEEMAYLGRIESDYRE 360
           + W  HKKEA WRL RLE QLESEK  ++REKMEE+EAK++ LREE+   + +IE +YRE
Sbjct: 301 RAWADHKKEAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYRE 358

Query: 361 QVSAMRRDAENKEAKLLEAWCSKHTKLTKLVEQ 365
           Q+  +RRDAE K+ KL + W S+H +LTK +EQ
Sbjct: 361 QLVGLRRDAEAKDQKLADQWTSRHIRLTKFLEQ 358

[Close]

BLAST of CmaCh01G003940 vs. TAIR 10
Match: AT5G52600.1 (myb domain protein 82 )

HSP 1 Score: 100.9 bits (250), Expect = 2.3e-21
Identity = 47/104 (45.19%), Postives = 66/104 (63.46%), Query Frame = 0


Query: 4   RQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKGSLS 63
           R  W+PEED +L++YV+ +G   W  IS+R G  L R  KSC  RWKNYL+P +K+GS+S
Sbjct: 14  RGLWKPEEDMILKSYVETHGEGNWADISRRSG--LKRGGKSCRLRWKNYLRPNIKRGSMS 73

Query: 64  PEEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQ 108
           P+EQ L+I +    GN+W  IA  +PGRT   +  +W     K+
Sbjct: 74  PQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK 115

[Close]

BLAST of CmaCh01G003940 vs. TAIR 10
Match: AT1G25340.1 (myb domain protein 116 )

HSP 1 Score: 99.8 bits (247), Expect = 5.2e-21
Identity = 47/110 (42.73%), Postives = 68/110 (61.82%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W  EED LL  Y+   G   WNL+++  G  L R  KSC  RW NYLKP +K+G+L+P+E
Sbjct: 23  WTLEEDTLLTNYISHNGEGRWNLLAKSSG--LKRAGKSCRLRWLNYLKPDIKRGNLTPQE 82

Query: 67  QTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQN 117
           Q L++ L +K+GN+W KI+  +PGRT   +  +W    +KQ ++L    N
Sbjct: 83  QLLILELHSKWGNRWSKISKYLPGRTDNDIKNYWRTRVQKQARQLNIDSN 130

[Close]

BLAST of CmaCh01G003940 vs. TAIR 10
Match: AT3G46130.1 (myb domain protein 48 )

HSP 1 Score: 99.0 bits (245), Expect = 8.9e-21
Identity = 55/149 (36.91%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W  +ED LL  +V  +G + W+ I++  G  L+R  KSC  RW NYL PGLK+G ++P+E
Sbjct: 12  WTEQEDILLVNFVHLFGDRRWDFIAKVSG--LNRTGKSCRLRWVNYLHPGLKRGKMTPQE 71

Query: 67  QTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKKLQKAQNLTQRRDYQNS 126
           + LV+ L AK+GN+W KIA ++PGRT   +  +W     K      KAQ   +     +S
Sbjct: 72  ERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRK------KAQEKKRPVSPTSS 131

Query: 127 DGNLSISGVSSPEKALQGPYDHILETFAE 156
             N S S V++     Q    H  ++  E
Sbjct: 132 FSNCSSSSVTTTTTNTQDTSCHSRKSSGE 152

[Close]

BLAST of CmaCh01G003940 vs. TAIR 10
Match: AT4G13480.1 (myb domain protein 79 )

HSP 1 Score: 98.6 bits (244), Expect = 1.2e-20
Identity = 47/115 (40.87%), Postives = 69/115 (60.00%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W  EED LL  YV+ +G   WN +S+  G  L R+ KSC  RW NYL+P LK+G ++P E
Sbjct: 11  WTAEEDRLLIEYVRVHGEGRWNSVSKLAG--LKRNGKSCRLRWVNYLRPDLKRGQITPHE 70

Query: 67  QTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEV-FKEKQLKKLQKAQNLTQR 121
           +++++ L AK+GN+W  IA  +PGRT   +  +W   FK+K       A+ +  R
Sbjct: 71  ESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKPTTNNAEKIKSR 123

The following BLAST results are available for this feature:

BLAST of CmaCh01G003940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80931	8.5e-77	46.31	Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1	[more]
Q94IB1	2.1e-75	44.93	Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 P...	[more]
Q9S7B2	8.0e-75	46.51	Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1	[more]
P81392	6.6e-21	33.87	Myb-related protein 306 OS=Antirrhinum majus OX=4151 GN=MYB306 PE=2 SV=1	[more]
Q10MB4	2.8e-19	39.50	Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 ...	[more]

BLAST of CmaCh01G003940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KCH4	6.7e-210	100.00	protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111492624 PE=4 ...	[more]
A0A6J1GCE3	1.7e-205	98.44	protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111452685 PE=...	[more]
A0A6J1FAF4	1.0e-181	85.94	protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111442290 PE=...	[more]
A0A6J1IZB3	2.9e-181	85.94	protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482044 PE=4 ...	[more]
A0A5D3CNU9	8.7e-149	76.36	Transcription factor AS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of CmaCh01G003940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997764.1	1.4e-209	100.00	protein rough sheath 2 homolog [Cucurbita maxima]	[more]
KAG7036747.1	1.4e-206	98.96	Transcription factor AS1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022949284.1	3.5e-205	98.44	protein rough sheath 2 homolog [Cucurbita moschata]	[more]
XP_023525837.1	1.5e-203	98.19	protein rough sheath 2 homolog [Cucurbita pepo subsp. pepo]	[more]
KAG6607046.1	2.7e-189	92.47	Transcription factor AS1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmaCh01G003940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37630.1	6.1e-78	46.31	myb-like HTH transcriptional regulator family protein	[more]
AT5G52600.1	2.3e-21	45.19	myb domain protein 82	[more]
AT1G25340.1	5.2e-21	42.73	myb domain protein 116	[more]
AT3G46130.1	8.9e-21	36.91	myb domain protein 48	[more]
AT4G13480.1	1.2e-20	40.87	myb domain protein 79	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 278..324
None	No IPR available	COILS	Coil	Coil	coord: 326..346
None	No IPR available	GENE3D	1.10.10.60		coord: 62..124 e-value: 8.4E-11 score: 43.6
None	No IPR available	GENE3D	1.10.10.60		coord: 4..58 e-value: 4.8E-18 score: 66.9
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 7..67 e-value: 2.2E-15 score: 56.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..235
None	No IPR available	PANTHER	PTHR47214	PROTEIN ROUGH SHEATH 2 HOMOLOG	coord: 1..370
None	No IPR available	PANTHER	PTHR47214:SF1	PROTEIN ROUGH SHEATH 2 HOMOLOG	coord: 1..370
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 3..55 e-value: 1.2E-14 score: 64.7 coord: 58..106 e-value: 1.8E-9 score: 47.5
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 54..104 score: 7.584305
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..53 score: 10.266769
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 63..100 e-value: 4.80924E-6 score: 41.407
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 6..53 e-value: 5.52948E-10 score: 52.5778
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 58..108 score: 19.265722
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..57 score: 24.383673
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 4..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G003940.1	CmaCh01G003940.1	mRNA