CmaCh01G003840 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G003840
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	LOB domain-containing protein
Location	Cma_Chr01: 1921974 .. 1923412 (+)
RNA-Seq Expression	CmaCh01G003840
Synteny	CmaCh01G003840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATTAATCTAAATCTGCGTGCCCCAGTTTTCCCTGAAAGCCCCACCGGCTCGCAGATTAATATTAGTTTCCCTCTTAAATATCCTCCGGGACTTTTCTTCAATCCTCAGAACTATTTCCACCTTATCTTCTTCCTCACTTCTCCCTCTATTCATTCTTCGGATTTTATGATTTCCTTCTGTCATTGCGGTTGCTAAAAATGCGGATGAGTTGTAATGGTTGCAGAGTTCTTCGCAAAGGTTGTAGTGAAAATTGCAGTATTCGACCTTGTTTGCAGTGGATCAAGAGTCCTGAATCTCAGGCTAACGCTACTGTTTTTCTTGCTAAGTTTTACGGCCGTGCTGGACTCATGAATCTTATCAACGCTGGTCCTGAGCATCTACGGCCTGGTGAGTTCTGTTTCTTGAATTTTGTTGGTTGATGGTTGCTGATTTTGTGCATTTTGATTGAAATTTGTGTTCGGTTCGATTTTGTAGCGATCTTTAGATCTCTTCTCTATGAGGCTTGTGGACGGATTGTGAATCCGATTTACGGATCGGTTGGATTGTTGTGGTCTAGTAATTGGCATCTCTGTCAGGCGGCTGTTGAGGCGGTGCTTAAAGGCGCTCCGATTATTCCGATTAATTTTGAGGCGGCCGCGACTGGCGATGGGCCGCCGTTGAAGGCTTACGACATTCGTCATATTTCGAAGGATGAAAACTCCGCCGCCTCCAACGATGGTGGAGCGAACCGGCGAGTCAGGACTCGGTGCCGTTTTAAGCGATCGGCCGTGAAGGATAAAGAGAGTACTGGAATCGTATCTGCCGTAGCGGAGTCGACTCGGCGACTGTTCACCTCGACAGAGATTAACCGTTCGTCGAGCGGCGAGTCGTCGCTGAGTCACCAATCAGACTCGCCGCATCTCGAACATGAGAGCAAAGAAACCGAGAGCATGATCTCGGTGGAGACGGCGGATGTTTCTCCTCTTTCGCCGTCGTCAGCTTTTTTCAGATCGGGATCCAGTCACGTACAAAGGAAGTTCACCAACCACGACGGCGGCAGGATGACAATTCCGGAAAGCGAATTAGCTCTAGAACTTACCCTGGGGATGGAGCCGGTATCACGTGCCCAACACGTGGTTCCAATGAAGAAGCGAAAGATAGAGGCCGACGGTGGGTTGAGGCCCAATAAGGAAACGTGCAATACGGTTTTGGGCCTGGATTTTGCAGCCGGAAACTAGGCCTGATAATGAGCCCACATATTGAAAAAAAACATAAAAACAAAACAAAAAAGCGAATAAGCGAATAAAAGAGGACAATTTTGACGGCGGGAATTGACTATCTGCGGTGGCATAGAAGAGATCTCGACCATTTGTTTGTTTGTGTTTTTATATTTTTTTTTTGGTTTTGTTGAATTACTGTTTTGACCCTATCTCTTTCCCCTTTTGTAATGAGACGCG

mRNA sequence

TATATTAATCTAAATCTGCGTGCCCCAGTTTTCCCTGAAAGCCCCACCGGCTCGCAGATTAATATTAGTTTCCCTCTTAAATATCCTCCGGGACTTTTCTTCAATCCTCAGAACTATTTCCACCTTATCTTCTTCCTCACTTCTCCCTCTATTCATTCTTCGGATTTTATGATTTCCTTCTGTCATTGCGGTTGCTAAAAATGCGGATGAGTTGTAATGGTTGCAGAGTTCTTCGCAAAGGTTGTAGTGAAAATTGCAGTATTCGACCTTGTTTGCAGTGGATCAAGAGTCCTGAATCTCAGGCTAACGCTACTGTTTTTCTTGCTAAGTTTTACGGCCGTGCTGGACTCATGAATCTTATCAACGCTGGTCCTGAGCATCTACGGCCTGCGATCTTTAGATCTCTTCTCTATGAGGCTTGTGGACGGATTGTGAATCCGATTTACGGATCGGTTGGATTGTTGTGGTCTAGTAATTGGCATCTCTGTCAGGCGGCTGTTGAGGCGGTGCTTAAAGGCGCTCCGATTATTCCGATTAATTTTGAGGCGGCCGCGACTGGCGATGGGCCGCCGTTGAAGGCTTACGACATTCGTCATATTTCGAAGGATGAAAACTCCGCCGCCTCCAACGATGGTGGAGCGAACCGGCGAGTCAGGACTCGGTGCCGTTTTAAGCGATCGGCCGTGAAGGATAAAGAGAGTACTGGAATCGTATCTGCCGTAGCGGAGTCGACTCGGCGACTGTTCACCTCGACAGAGATTAACCGTTCGTCGAGCGGCGAGTCGTCGCTGAGTCACCAATCAGACTCGCCGCATCTCGAACATGAGAGCAAAGAAACCGAGAGCATGATCTCGGTGGAGACGGCGGATGTTTCTCCTCTTTCGCCGTCGTCAGCTTTTTTCAGATCGGGATCCAGTCACGTACAAAGGAAGTTCACCAACCACGACGGCGGCAGGATGACAATTCCGGAAAGCGAATTAGCTCTAGAACTTACCCTGGGGATGGAGCCGGTATCACGTGCCCAACACGTGGTTCCAATGAAGAAGCGAAAGATAGAGGCCGACGGTGGGTTGAGGCCCAATAAGGAAACGTGCAATACGGTTTTGGGCCTGGATTTTGCAGCCGGAAACTAGGCCTGATAATGAGCCCACATATTGAAAAAAAACATAAAAACAAAACAAAAAAGCGAATAAGCGAATAAAAGAGGACAATTTTGACGGCGGGAATTGACTATCTGCGGTGGCATAGAAGAGATCTCGACCATTTGTTTGTTTGTGTTTTTATATTTTTTTTTTGGTTTTGTTGAATTACTGTTTTGACCCTATCTCTTTCCCCTTTTGTAATGAGACGCG

Coding sequence (CDS)

ATGCGGATGAGTTGTAATGGTTGCAGAGTTCTTCGCAAAGGTTGTAGTGAAAATTGCAGTATTCGACCTTGTTTGCAGTGGATCAAGAGTCCTGAATCTCAGGCTAACGCTACTGTTTTTCTTGCTAAGTTTTACGGCCGTGCTGGACTCATGAATCTTATCAACGCTGGTCCTGAGCATCTACGGCCTGCGATCTTTAGATCTCTTCTCTATGAGGCTTGTGGACGGATTGTGAATCCGATTTACGGATCGGTTGGATTGTTGTGGTCTAGTAATTGGCATCTCTGTCAGGCGGCTGTTGAGGCGGTGCTTAAAGGCGCTCCGATTATTCCGATTAATTTTGAGGCGGCCGCGACTGGCGATGGGCCGCCGTTGAAGGCTTACGACATTCGTCATATTTCGAAGGATGAAAACTCCGCCGCCTCCAACGATGGTGGAGCGAACCGGCGAGTCAGGACTCGGTGCCGTTTTAAGCGATCGGCCGTGAAGGATAAAGAGAGTACTGGAATCGTATCTGCCGTAGCGGAGTCGACTCGGCGACTGTTCACCTCGACAGAGATTAACCGTTCGTCGAGCGGCGAGTCGTCGCTGAGTCACCAATCAGACTCGCCGCATCTCGAACATGAGAGCAAAGAAACCGAGAGCATGATCTCGGTGGAGACGGCGGATGTTTCTCCTCTTTCGCCGTCGTCAGCTTTTTTCAGATCGGGATCCAGTCACGTACAAAGGAAGTTCACCAACCACGACGGCGGCAGGATGACAATTCCGGAAAGCGAATTAGCTCTAGAACTTACCCTGGGGATGGAGCCGGTATCACGTGCCCAACACGTGGTTCCAATGAAGAAGCGAAAGATAGAGGCCGACGGTGGGTTGAGGCCCAATAAGGAAACGTGCAATACGGTTTTGGGCCTGGATTTTGCAGCCGGAAACTAG

Protein sequence

MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATGDGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRRLFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGSSHVQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRPNKETCNTVLGLDFAAGN

Homology

[Close]

BLAST of CmaCh01G003840 vs. ExPASy Swiss-Prot
Match: Q9M886 (LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 8.1e-78
Identity = 176/306 (57.52%), Postives = 202/306 (66.01%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSE+CSIRPCL WIKSPE+QANATVFLAKFYGRAGLMNLINAGP H
Sbjct: 1   MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG 120
           LRP IFRSLL+EACGRIVNPIYGSVGLLWS NW LCQ AVEAV+KG P+  I  +AA  G
Sbjct: 61  LRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
            GPPLK YDIRHISKD+NSAA+  G  + ++    R KR           VS VA     
Sbjct: 121 QGPPLKIYDIRHISKDDNSAAAATGSTDLKLAKTRRAKR-----------VSTVAIQAES 180

Query: 181 LFTSTEINRSSSGESSLSHQSD--SPHLEHESKETESMISVETADVSPLSPSSAFFRSGS 240
              S E    +S +SSLSHQS+  + H E ESKE+ES +S    +V   SP +     GS
Sbjct: 181 EGKSDE----ASHDSSLSHQSEIVAAH-EGESKESESNVS----EVLAFSPPAV---KGS 240

Query: 241 SHVQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRPNKETC 300
                               E+ L+LTL +EPVSRA HVVP+KKR+I   G  +  + TC
Sbjct: 241 -------------------GEIKLDLTLRLEPVSRAYHVVPVKKRRIGVFGTCQ-KESTC 263

Query: 301 NTVLGL 305
            T L L
Sbjct: 301 KTELML 263

[Close]

BLAST of CmaCh01G003840 vs. ExPASy Swiss-Prot
Match: Q9ZW96 (LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.1e-71
Identity = 160/307 (52.12%), Postives = 183/307 (59.61%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKS ESQANATVFLAKFYGRAGLMNL+N GP+H
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWS NWHLCQAAVEAV++G+P+ PI  +AA TG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTG 120

Query: 121 DGPPL--KAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAEST 180
             PP   K  DIRH+S       S D    RR R  C+ +R+                  
Sbjct: 121 QAPPFNNKLCDIRHVS-------SRDENVKRRSRGACKEERNV----------------- 180

Query: 181 RRLFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGS 240
                     RS S ESSLSH+S    +  E   TE                        
Sbjct: 181 ----------RSLSHESSLSHESP---VSSEETTTEE----------------------- 229

Query: 241 SHVQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQH-VVPMKKRKIEADGGLRPNKET 300
                            P++ + LELTLG+EP++R  H VVPMKKRK+E   G   +++T
Sbjct: 241 -----------------PKTWIGLELTLGLEPLARGNHVVVPMKKRKLER-CGTSEDEDT 229

Query: 301 CNTVLGL 305
           C   LGL
Sbjct: 301 CKIELGL 229

[Close]

BLAST of CmaCh01G003840 vs. ExPASy Swiss-Prot
Match: Q9CA30 (LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.3e-55
Identity = 106/170 (62.35%), Postives = 129/170 (75.88%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MR+SCNGCRVLRKGC+++C+IRPCLQWIKS +SQANAT+FLAKFYGRAGL+NLI +GP+H
Sbjct: 1   MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPI--IPINFEAAA 120
           LRPAIFRSLLYEACGRIVNP+ GSVGL+WS NW  CQAAV+AVL G PI   P+   +A+
Sbjct: 61  LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

Query: 121 TGDGPPLKAYDIRHISKDENSAASNDG------GANRRVRTRCRFKRSAV 163
               PP + YDIRH++KD  +   +         AN+      RFKR +V
Sbjct: 121 HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQTGRFKRESV 170

[Close]

BLAST of CmaCh01G003840 vs. ExPASy Swiss-Prot
Match: Q9SN23 (LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.7e-43
Identity = 94/197 (47.72%), Postives = 124/197 (62.94%), Query Frame = 0


Query: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLR 62
           MSCNGCRVLRKGCSENC +RPC+QWI+SPE+Q +ATVF+AKF+GRAGLM+ I+A PE   
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPIN--FEAAATG 122
           PA+F+SLLYEACGR VNP+ G+VGLLW+ NW++CQAAVE VL+G  + PI          
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFA 120

Query: 123 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 182
             P   + +   I  +  +    D   +R +   CRF  S  + +       + A   +R
Sbjct: 121 GFPSPTSDEASEICTEMLNLRKADDSGDRNIYHHCRFSSSRSRSR-------STASPPKR 180

Query: 183 LFTSTEINRSSSGESSL 198
              S+E   SS  + SL
Sbjct: 181 KRLSSEQQPSSELDLSL 190

[Close]

BLAST of CmaCh01G003840 vs. ExPASy Swiss-Prot
Match: Q9SZE8 (LOB domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=LBD39 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.1e-42
Identity = 92/167 (55.09%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLR 62
           MSCNGCRVLRKGCSE C +RPCLQWI+S ESQ +ATVF+AKF+GRAGLM+ I++ PE  R
Sbjct: 1   MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60

Query: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATGDG 122
           PA+F+SLL+EACGR VNP+ G+VG+LW+ NWH+CQAAVE VL+G  + PI    +   + 
Sbjct: 61  PALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPI----SDLLES 120

Query: 123 PPLKAYDIRHISKDENSAASNDGGANRRVRTRCRF--KRSAVKDKES 168
           P L       IS DE+S   +    +R     CRF   RS  + K+S
Sbjct: 121 PSLM------ISCDESSEIWHQ-DVSRNQTHHCRFSTSRSTTEMKDS 156

[Close]

BLAST of CmaCh01G003840 vs. ExPASy TrEMBL
Match: A0A6J1KC77 (LOB domain-containing protein 41-like OS=Cucurbita maxima OX=3661 GN=LOC111492566 PE=3 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 6.9e-173
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR
Sbjct: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180

Query: 181 LFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGSSH 240
           LFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGSSH
Sbjct: 181 LFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGSSH 240

Query: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRPNKETCNT 300
           VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRPNKETCNT
Sbjct: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRPNKETCNT 300

Query: 301 VLGLDFAAGN 311
           VLGLDFAAGN
Sbjct: 301 VLGLDFAAGN 310

[Close]

BLAST of CmaCh01G003840 vs. ExPASy TrEMBL
Match: A0A6J1GAR7 (LOB domain-containing protein 41-like OS=Cucurbita moschata OX=3662 GN=LOC111452450 PE=3 SV=1)

HSP 1 Score: 596.7 bits (1537), Expect = 5.7e-167
Identity = 301/310 (97.10%), Postives = 304/310 (98.06%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKG+PIIPIN EAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGSPIIPINSEAAATG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR
Sbjct: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180

Query: 181 LFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGSSH 240
           LF+STEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSP SP SAFFRS SSH
Sbjct: 181 LFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSPPSAFFRSESSH 240

Query: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRPNKETCNT 300
           VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIE + GLRPNKETCNT
Sbjct: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT 300

Query: 301 VLGLDFAAGN 311
           VLGLDFAAGN
Sbjct: 301 VLGLDFAAGN 310

[Close]

BLAST of CmaCh01G003840 vs. ExPASy TrEMBL
Match: A0A6J1J6I5 (LOB domain-containing protein 41 OS=Cucurbita maxima OX=3661 GN=LOC111482207 PE=3 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.8e-136
Identity = 254/308 (82.47%), Postives = 271/308 (87.99%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCL WIKSP+SQANATVFLAKFYGRAGLMNLINAGP+H
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPDSQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWS +W LCQAAVEAVLKGAPI PIN EAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRH+SKDENSAASNDGG NRRV+TRCRFKRSAVK K   GI S V ESTRR
Sbjct: 121 DGPPLKAYDIRHVSKDENSAASNDGGVNRRVKTRCRFKRSAVKAKACKGISSTVEESTRR 180

Query: 181 LFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGSSH 240
           L  S E+NRSSSGESSLSHQSDSPH+E+ESKETESMISV TA+ SP       FRS S+ 
Sbjct: 181 L-CSIELNRSSSGESSLSHQSDSPHVENESKETESMISVSTAEFSPPPVLPVLFRSESTS 240

Query: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRPNKETCNT 300
           VQ++   H  G + IP+SELALELTLGM+PVSRA+HV+PMKKRKIEAD GLRPN E CNT
Sbjct: 241 VQKRL-GHGDGTVPIPQSELALELTLGMKPVSRAEHVIPMKKRKIEADVGLRPNNEACNT 300

Query: 301 VLGLDFAA 309
           VLGLDFAA
Sbjct: 301 VLGLDFAA 306

[Close]

BLAST of CmaCh01G003840 vs. ExPASy TrEMBL
Match: A0A6J1F4Q5 (LOB domain-containing protein 41 OS=Cucurbita moschata OX=3662 GN=LOC111442325 PE=3 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 2.2e-134
Identity = 253/309 (81.88%), Postives = 270/309 (87.38%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCL WIKSP+SQANATVFLAKFYGRAGLMNLINAGP+H
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPDSQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWS +W LCQAAVEAVLKGAPI PIN EAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRH+SKDENSAASNDGG NRRV+TRCRFKRSAVK K   GI S V ESTRR
Sbjct: 121 DGPPLKAYDIRHVSKDENSAASNDGGVNRRVKTRCRFKRSAVKTKACKGISSTVDESTRR 180

Query: 181 LFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGSSH 240
           L  S E+NRSSSGESSLSHQSDSPH+E+ESKET+SMISV TA  SP       FRS S+ 
Sbjct: 181 L-CSIELNRSSSGESSLSHQSDSPHVENESKETDSMISVSTAKFSPPPVLPVLFRSESTS 240

Query: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRP-NKETCN 300
           V ++   H GG + IP+SELALELTLGM+PVSRA+HV+PMKKRKIEAD GLRP N E CN
Sbjct: 241 VPKR-PGHGGGTVPIPQSELALELTLGMKPVSRAEHVIPMKKRKIEADVGLRPNNNEACN 300

Query: 301 TVLGLDFAA 309
           TVLGLDFAA
Sbjct: 301 TVLGLDFAA 307

[Close]

BLAST of CmaCh01G003840 vs. ExPASy TrEMBL
Match: A0A0A0LCG6 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G278920 PE=3 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 1.4e-133
Identity = 250/308 (81.17%), Postives = 265/308 (86.04%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGP+H
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWS +W LCQAAVEAVLKGAPI PIN EAA TG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRH+SKDENS ASNDGGANR V+TRCRFKRS+VK K S GI S V + + R
Sbjct: 121 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 180

Query: 181 LFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGSSH 240
              STE+NRSSSGESSLSHQSDS HLE+ESKETESMISVETA+VSP    S  FRS S+ 
Sbjct: 181 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSEST- 240

Query: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRPNKETCNT 300
                   +G  + IP SELALELTLGMEPV RAQHV+PMKKRKIEA+ GLRP  ETCNT
Sbjct: 241 -----GGREGVSVPIPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETCNT 300

Query: 301 VLGLDFAA 309
           VLGLDFAA
Sbjct: 301 VLGLDFAA 302

[Close]

BLAST of CmaCh01G003840 vs. NCBI nr
Match: XP_022997669.1 (LOB domain-containing protein 41-like [Cucurbita maxima] >XP_022997672.1 LOB domain-containing protein 41-like [Cucurbita maxima])

HSP 1 Score: 616.3 bits (1588), Expect = 1.4e-172
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR
Sbjct: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180

Query: 181 LFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGSSH 240
           LFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGSSH
Sbjct: 181 LFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGSSH 240

Query: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRPNKETCNT 300
           VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRPNKETCNT
Sbjct: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRPNKETCNT 300

Query: 301 VLGLDFAAGN 311
           VLGLDFAAGN
Sbjct: 301 VLGLDFAAGN 310

[Close]

BLAST of CmaCh01G003840 vs. NCBI nr
Match: XP_022948958.1 (LOB domain-containing protein 41-like [Cucurbita moschata] >XP_022948959.1 LOB domain-containing protein 41-like [Cucurbita moschata])

HSP 1 Score: 596.7 bits (1537), Expect = 1.2e-166
Identity = 301/310 (97.10%), Postives = 304/310 (98.06%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKG+PIIPIN EAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGSPIIPINSEAAATG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR
Sbjct: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180

Query: 181 LFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGSSH 240
           LF+STEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSP SP SAFFRS SSH
Sbjct: 181 LFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSPPSAFFRSESSH 240

Query: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRPNKETCNT 300
           VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIE + GLRPNKETCNT
Sbjct: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT 300

Query: 301 VLGLDFAAGN 311
           VLGLDFAAGN
Sbjct: 301 VLGLDFAAGN 310

[Close]

BLAST of CmaCh01G003840 vs. NCBI nr
Match: XP_023524743.1 (LOB domain-containing protein 41-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 591.7 bits (1524), Expect = 3.8e-165
Identity = 298/310 (96.13%), Postives = 302/310 (97.42%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPIN EAA TG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINSEAATTG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR
Sbjct: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180

Query: 181 LFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGSSH 240
           LF+STEINRSSSGESSL+HQSDSPHLEHESKETESMISVETADVSP S  SAFFRS SSH
Sbjct: 181 LFSSTEINRSSSGESSLTHQSDSPHLEHESKETESMISVETADVSPPSAPSAFFRSESSH 240

Query: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRPNKETCNT 300
           VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEA+ GLRPNKETCNT
Sbjct: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEANDGLRPNKETCNT 300

Query: 301 VLGLDFAAGN 311
           +LGLDF AGN
Sbjct: 301 ILGLDFVAGN 310

[Close]

BLAST of CmaCh01G003840 vs. NCBI nr
Match: KAG7036733.1 (LOB domain-containing protein 41 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 590.1 bits (1520), Expect = 1.1e-164
Identity = 299/310 (96.45%), Postives = 302/310 (97.42%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNW+LCQAAVEAVLKGAPIIPIN EAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR
Sbjct: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180

Query: 181 LFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGSSH 240
           LF+STEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSP S  SAFFRS SSH
Sbjct: 181 LFSSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPPSTPSAFFRSESSH 240

Query: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRPNKETCNT 300
           VQRKFTNHDG RMTIPESELALELTLGMEPVSRAQHVVPMKKRKIE + GLRPNKETCNT
Sbjct: 241 VQRKFTNHDGSRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT 300

Query: 301 VLGLDFAAGN 311
           VLGLDFAAGN
Sbjct: 301 VLGLDFAAGN 310

[Close]

BLAST of CmaCh01G003840 vs. NCBI nr
Match: KAG6607034.1 (LOB domain-containing protein 41, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 589.3 bits (1518), Expect = 1.9e-164
Identity = 298/310 (96.13%), Postives = 302/310 (97.42%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNW+LCQAAVEAVLKGAPIIPIN EAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWYLCQAAVEAVLKGAPIIPINSEAAATG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
           DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGI SAVAESTRR
Sbjct: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIASAVAESTRR 180

Query: 181 LFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGSSH 240
           LF+STEINRSSSG+SSLSHQSDSPHLEHESKETESMISVETADVSP SP SAFFRS SSH
Sbjct: 181 LFSSTEINRSSSGDSSLSHQSDSPHLEHESKETESMISVETADVSPPSPPSAFFRSESSH 240

Query: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRPNKETCNT 300
           VQRKFTNHDG RMTIPESELALELTLGMEPVSRAQHVVPMKKRKIE + GLRPNKETCNT
Sbjct: 241 VQRKFTNHDGVRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEGNDGLRPNKETCNT 300

Query: 301 VLGLDFAAGN 311
           VLGLDFAAGN
Sbjct: 301 VLGLDFAAGN 310

[Close]

BLAST of CmaCh01G003840 vs. TAIR 10
Match: AT3G02550.1 (LOB domain-containing protein 41 )

HSP 1 Score: 292.0 bits (746), Expect = 5.8e-79
Identity = 176/306 (57.52%), Postives = 202/306 (66.01%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSE+CSIRPCL WIKSPE+QANATVFLAKFYGRAGLMNLINAGP H
Sbjct: 1   MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG 120
           LRP IFRSLL+EACGRIVNPIYGSVGLLWS NW LCQ AVEAV+KG P+  I  +AA  G
Sbjct: 61  LRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIG 120

Query: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180
            GPPLK YDIRHISKD+NSAA+  G  + ++    R KR           VS VA     
Sbjct: 121 QGPPLKIYDIRHISKDDNSAAAATGSTDLKLAKTRRAKR-----------VSTVAIQAES 180

Query: 181 LFTSTEINRSSSGESSLSHQSD--SPHLEHESKETESMISVETADVSPLSPSSAFFRSGS 240
              S E    +S +SSLSHQS+  + H E ESKE+ES +S    +V   SP +     GS
Sbjct: 181 EGKSDE----ASHDSSLSHQSEIVAAH-EGESKESESNVS----EVLAFSPPAV---KGS 240

Query: 241 SHVQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRPNKETC 300
                               E+ L+LTL +EPVSRA HVVP+KKR+I   G  +  + TC
Sbjct: 241 -------------------GEIKLDLTLRLEPVSRAYHVVPVKKRRIGVFGTCQ-KESTC 263

Query: 301 NTVLGL 305
            T L L
Sbjct: 301 KTELML 263

[Close]

BLAST of CmaCh01G003840 vs. TAIR 10
Match: AT1G67100.1 (LOB domain-containing protein 40 )

HSP 1 Score: 271.6 bits (693), Expect = 8.1e-73
Identity = 160/307 (52.12%), Postives = 183/307 (59.61%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MRMSCNGCRVLRKGCSENCSIRPCLQWIKS ESQANATVFLAKFYGRAGLMNL+N GP+H
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWS NWHLCQAAVEAV++G+P+ PI  +AA TG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTG 120

Query: 121 DGPPL--KAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAEST 180
             PP   K  DIRH+S       S D    RR R  C+ +R+                  
Sbjct: 121 QAPPFNNKLCDIRHVS-------SRDENVKRRSRGACKEERNV----------------- 180

Query: 181 RRLFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGS 240
                     RS S ESSLSH+S    +  E   TE                        
Sbjct: 181 ----------RSLSHESSLSHESP---VSSEETTTEE----------------------- 229

Query: 241 SHVQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQH-VVPMKKRKIEADGGLRPNKET 300
                            P++ + LELTLG+EP++R  H VVPMKKRK+E   G   +++T
Sbjct: 241 -----------------PKTWIGLELTLGLEPLARGNHVVVPMKKRKLER-CGTSEDEDT 229

Query: 301 CNTVLGL 305
           C   LGL
Sbjct: 301 CKIELGL 229

[Close]

BLAST of CmaCh01G003840 vs. TAIR 10
Match: AT1G68510.1 (LOB domain-containing protein 42 )

HSP 1 Score: 216.9 bits (551), Expect = 2.4e-56
Identity = 106/170 (62.35%), Postives = 129/170 (75.88%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60
           MR+SCNGCRVLRKGC+++C+IRPCLQWIKS +SQANAT+FLAKFYGRAGL+NLI +GP+H
Sbjct: 1   MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPI--IPINFEAAA 120
           LRPAIFRSLLYEACGRIVNP+ GSVGL+WS NW  CQAAV+AVL G PI   P+   +A+
Sbjct: 61  LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

Query: 121 TGDGPPLKAYDIRHISKDENSAASNDG------GANRRVRTRCRFKRSAV 163
               PP + YDIRH++KD  +   +         AN+      RFKR +V
Sbjct: 121 HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQTGRFKRESV 170

[Close]

BLAST of CmaCh01G003840 vs. TAIR 10
Match: AT3G49940.1 (LOB domain-containing protein 38 )

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-44
Identity = 94/197 (47.72%), Postives = 124/197 (62.94%), Query Frame = 0


Query: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLR 62
           MSCNGCRVLRKGCSENC +RPC+QWI+SPE+Q +ATVF+AKF+GRAGLM+ I+A PE   
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPIN--FEAAATG 122
           PA+F+SLLYEACGR VNP+ G+VGLLW+ NW++CQAAVE VL+G  + PI          
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFA 120

Query: 123 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 182
             P   + +   I  +  +    D   +R +   CRF  S  + +       + A   +R
Sbjct: 121 GFPSPTSDEASEICTEMLNLRKADDSGDRNIYHHCRFSSSRSRSR-------STASPPKR 180

Query: 183 LFTSTEINRSSSGESSL 198
              S+E   SS  + SL
Sbjct: 181 KRLSSEQQPSSELDLSL 190

[Close]

BLAST of CmaCh01G003840 vs. TAIR 10
Match: AT4G37540.1 (LOB domain-containing protein 39 )

HSP 1 Score: 175.3 bits (443), Expect = 7.9e-44
Identity = 92/167 (55.09%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 3   MSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLR 62
           MSCNGCRVLRKGCSE C +RPCLQWI+S ESQ +ATVF+AKF+GRAGLM+ I++ PE  R
Sbjct: 1   MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60

Query: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATGDG 122
           PA+F+SLL+EACGR VNP+ G+VG+LW+ NWH+CQAAVE VL+G  + PI    +   + 
Sbjct: 61  PALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPI----SDLLES 120

Query: 123 PPLKAYDIRHISKDENSAASNDGGANRRVRTRCRF--KRSAVKDKES 168
           P L       IS DE+S   +    +R     CRF   RS  + K+S
Sbjct: 121 PSLM------ISCDESSEIWHQ-DVSRNQTHHCRFSTSRSTTEMKDS 156

The following BLAST results are available for this feature:

BLAST of CmaCh01G003840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M886	8.1e-78	57.52	LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 S...	[more]
Q9ZW96	1.1e-71	52.12	LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 S...	[more]
Q9CA30	3.3e-55	62.35	LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 S...	[more]
Q9SN23	1.7e-43	47.72	LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 S...	[more]
Q9SZE8	1.1e-42	55.09	LOB domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=LBD39 PE=2 S...	[more]

BLAST of CmaCh01G003840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KC77	6.9e-173	100.00	LOB domain-containing protein 41-like OS=Cucurbita maxima OX=3661 GN=LOC11149256...	[more]
A0A6J1GAR7	5.7e-167	97.10	LOB domain-containing protein 41-like OS=Cucurbita moschata OX=3662 GN=LOC111452...	[more]
A0A6J1J6I5	1.8e-136	82.47	LOB domain-containing protein 41 OS=Cucurbita maxima OX=3661 GN=LOC111482207 PE=...	[more]
A0A6J1F4Q5	2.2e-134	81.88	LOB domain-containing protein 41 OS=Cucurbita moschata OX=3662 GN=LOC111442325 P...	[more]
A0A0A0LCG6	1.4e-133	81.17	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G278920 PE=3 SV...	[more]

BLAST of CmaCh01G003840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997669.1	1.4e-172	100.00	LOB domain-containing protein 41-like [Cucurbita maxima] >XP_022997672.1 LOB dom...	[more]
XP_022948958.1	1.2e-166	97.10	LOB domain-containing protein 41-like [Cucurbita moschata] >XP_022948959.1 LOB d...	[more]
XP_023524743.1	3.8e-165	96.13	LOB domain-containing protein 41-like [Cucurbita pepo subsp. pepo]	[more]
KAG7036733.1	1.1e-164	96.45	LOB domain-containing protein 41 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6607034.1	1.9e-164	96.13	LOB domain-containing protein 41, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of CmaCh01G003840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02550.1	5.8e-79	57.52	LOB domain-containing protein 41	[more]
AT1G67100.1	8.1e-73	52.12	LOB domain-containing protein 40	[more]
AT1G68510.1	2.4e-56	62.35	LOB domain-containing protein 42	[more]
AT3G49940.1	1.2e-44	47.72	LOB domain-containing protein 38	[more]
AT4G37540.1	7.9e-44	55.09	LOB domain-containing protein 39	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 4..103 e-value: 1.6E-24 score: 86.4
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 3..109 score: 17.049347
IPR017414	LOB domain-containing protein	PIRSF	PIRSF038155	AS2	coord: 1..306 e-value: 9.1E-96 score: 319.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..216
None	No IPR available	PANTHER	PTHR31304:SF9	LOB DOMAIN-CONTAINING PROTEIN 40	coord: 1..304
None	No IPR available	PANTHER	PTHR31304	LOB DOMAIN-CONTAINING PROTEIN 38	coord: 1..304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G003840.1	CmaCh01G003840.1	mRNA