CmaCh01G003680 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G003680
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	nijmegen breakage syndrome 1 protein
Location	Cma_Chr01: 1843883 .. 1851388 (+)
RNA-Seq Expression	CmaCh01G003680
Synteny	CmaCh01G003680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTACTGTTCAATTTGATTGCCCTTTTCTTTTTCCCGCTCGCTTCGACCCTTCCATGGAATTGCTCATCAGCTGTTTAGCGCCATAGAAACCTATACTGGAAAAATATGGTTTGGGGCTTCTTCCCCGTCGATCCTCTTTCAGGTGCGTTCGCTTCGTGATTTTCTAATTACTTCTTGCTGCTGTAGAACTGGTTTTCTTTTAGTTGTTCTTAGGTAACTTTTTGCGTACTGAGAAAAGCTTTATATTTATTTTCAATGCTTACTTTCTGAAGAATCGTCAGTTTTCGTTTGGTTGGACAATTTGTATAAACAAGTGCATGTTGCAGGTGAGGAAAAATTCTACATTTTTGCACCTGGGAAGTATAAAGTGGGTCGTAAAGGTACTTCGATTGTGCTAGTAGTTATCTTTGATGCAGTTCTTTTGTTTCTGGATGATAAATTTTATGGCGTATTCTTGGTTTATAATGAAATTTAGAAATATTTTTAATGTTAGTAGAAGCGATATTTCTTTTACCAGAACAATTCCTGTGCGCATTTTTTCCTTCGTCTGTGTTTGTTTTATTATATAATTATTATTAAGAAGCGGATATAGGATTAGACTGTAATTTTAATTGGTTAACTATAAGTGTACTCAATGTCCTGATGAGACCCTATCAAGGCTACTTTTGACCATATTGGCCTTACTGAGTGAGTGTCCGAGAGACCTTATTGGGCGAGTGATCCTAAGTAATCTGTGTCCTTTGAAATTGTATTCAAGAGGCAAGAGTTCAATGCTGCTATATACTCAAGTCGAAGAGTGTTAATAAAGTTGTGGGAAGGATACTACACCACCAAACGAGCTAAACTAGGATATCAAAGATGTTGCTCCACCCATAGATACCGACTTGCTAATTTCCATGAGAAAAAATGGGCTCAAAGTTTCACCCTTCGACCATGATATCCTCAATCCCACTCCTTTAAGTATAATTTCCCAAAAAGATGTCAAAGCTTCCTTACTCGCGTCTGGGGAATATTCTTAACAGCTATAGAATTTTGCAATATTTTAAAGGAATAAGGAGAAGTTTCTTATTTATTCCTCTCTCCTTTCCAGTGAGATTTGCCATTTTAGCTAAATTTGTTAGAGAGAGAAATGCGTGTGTCAAATGAAGAGAGACAAAGGGAGCTTAGGTTAGAGAAACTAGAGAAGGAGGGTCAGAGAGACTCTATAGAGGGAGAGAGAGATTAAGATAGAGGGCTTACTTGTCGCTTTGATAAGTTAGAGTGCTTGATGCTATCACTTCAAGTGAAGAATTGACAGAGGGTATTTTGACTTTTGAGGGAGGCATTTAAAATTTGACATTATGCTCTTAAAAAAAAAAATTGAAGTGCTCAGGCACCACGCCTCAGAGCTCAAGCAGGAGGGCGCACACATATATTTGTGCCTATGTGAGGCAAGGTTCCTCATGCAAGTACTTTTTTGAGGCAAAATATTATAAACATTTTCCATAATGTTTTGTAGTTGTTTATTTTCAATCATGTTGTCTTCAAAGTTCCTTTTTGTATTACATTTTTGCTGCCTTTTTCATGAGAAAAAATATTTTGAACATTCAAGAACATCCATTTAACAGTCACTTTCTTTAGCTCTCAAATCATGCTCTCAGTTGTTTGCTCATTCTGTGATCATGTTTATCCCACAGGCTGCGATTTGACTATAACAAAAGATAAAGGAGTTTCCCGCATCCATGCAGAAATAGTTGTAGATGCTATGATATTTATAAATTCCCACAAGAGTTATTTATCTAATGTTTCCTCTAAAGTGAGGATTAGTGATTGCTCCAAGTATGGGACATTTGTTAGCAGGAAATCTGGGTTGAAGGAGAAAATTCACGAGCTTCCAAAAAAAGAAGCAAGCTTGTATGATGGAGATGTGATTTCATTTGGATCTGGCAATGCAACGTACAGGTAATCTGAGAAACATTTAAATTAGTGACAAGATTTATCATTCAAGTTGCTCTCTCTGGTTAGCTCTTTATTAGAAGCAGGGTATGCTTTTTATATATGGTTTATTAGACTCATTATTAAATCCATGGCTCTCAGTTAAACCAGGTGCGGTTGCTTGCTATTTATTCAGTAAGTGATTGTTTTCTGCAAGGGCTTCTGTAAATTCTTTAATACTTCCTTTTTAGATTCTATGACAATATTCCTTTCTATATTTCCCATATTCTTTTTCTTTTTTCTTTCTACTTTCCTTTATTCTTGAATCTCAACCACTGAAGCAAATTTTTTGTGATAACTTTGTCTCCTTTACTAAGTTCCATGTTTTTGTATATCCTAATTTTTCTAGATTTTGGCTTTTACTTTTAGCTTCCATTAATATAGATGGCAAAGTTTCTTGTTATTTGTACTAAAATTTATTTTTAGAAGCTAGAAGATTTCATATGCCTTTTTGCTATTGTGAATATACATTAACATATTTTAATGCTAATATACTTCTTGGTTTCTATAAAAAAAAAAAAGAAAAGAAAAAAAAAAGGAAACATTACCATTTTATAGTCAAAGAAACTTTACTTTCTATCTAACACCCAATACGCTTGAAAACCTTATTATCCTACAAACAAATCTTGCAGGTTCTCCTTTGTGCAACTTGTGTTTTACGTTCACCATTCAGTGTCTTTCCAATTCCAGCTGCTGAGGGACAAGGTTTCATCCATAGGTCAGTCATAAAGAAGTTGCCGATCTTCTTTTACTTCACCTATGAAAGGAATTCTTATCTGATTAATAGAAGTTCCAATTTTCCAAGGTTTCTTATGTAACTGCTTAGTTGCTTTATGTTAGCATGTCCTAGAACAAACACTTGAAAACTCTAAATATGACCTTAAAGACATGTTGAATATGTTACAGAATATGAGGAAAAACAGGGGAGAATACTTAACCCTATTCATGTGTGGAACTCTCAACTTAATAGCATGGTAAATTTAAAGAACGGAAAATAACTAAAGGAAGGTTTGTTTAAATTAGGGATAAACTGTGAAAAAGATAAAAATAAAAAATAATAACAATACATTATTAGCACACAAATAACGAGCTGCTATATACATCCTTACACTCTTTTCTTTTAATATATGAAAATCATCTGTCTTGGTGTTTTACAAGATAAGAAAAATTTGAGACTGATTCATTTTCCAAAATCATCTGGCTTCTAATAAGTTGAAATGTTTACGAGGCACGTTTATCAATGAGCTCTGCATTATTGATACTGTGATCCCGTCAATCAAGTTCACCATCACTATTTATTACATTGTTTATGCTGCACAACATCTACTCATTCTACAAGTTAAATCTACATTGAAGAAAGTGAATTAGTTTGTCGTTTTGGTCGAATTTGAAGAGTGTATATTTAAATGTAGGTGCTTCTACATCTCATGATATTCGGGAGTGTACGCATGTGCTTGTAGAGGAACTGATGCCTTTTGATGAAGCTCTAGTTGACGCCATAGTGGCTGAGAAACCTTTTGTTATCACAAGTTGGGTTGAGGTAAAAATATGCTTCATATATTAATTGTTTCACTGTGATGCCAAGTTCTGTCATCTTGTTCACCCCAACATTACGGAGGAACCTGATCTTGAGAATAGAAAATTACAGTGCAATTGTATTAAGATATAAAAGGAAAATGACAATATTAACCCCAGGCCCTTATATAGGCATGGCTCTCCCAAGGAAACTACATTCCAAAATTCTAATTGAATAGAACCCTTTGATTATAACGACCCTGCCCCAACTACACTAAGTAATTACTCAAATATTTTTCTCCTTTAGATTCCTAGTTTTAGGTATCCTTGACAATTTTTCATGTACATCATTGTTAAAGTCTAGCAAGGATAAACATAATTTACAACTAGAAAGTGTACACCTATATGGTAAATACAAATAATGGAACACGGAAAAAACGAGGAACAAGTAGATTTTTTCTTGGAGATCCTTGGAGGAGCATCCTCATGACTCTCAACAGGCCTATTAGTTTCTTTTGCTTTGGCTCTATTAACAAACTTCAGTTCAACCATCTGCAAAATTACTTTACGAAAATCTGAAGATTCTTTATGCTTTTATTTTTATGTTGACCATCATCATGGATCAAGAATGACTTTGATTACCACTTTGTTGAATAAAGAAGTTACTTCAATTTGTTTTAATCTATGCACAGATCAACGCCAAGCATTATCATTATTTACAGTTGTGTTTGTTTTTTTTTTTTTTTTTTTTAAGCAACTGAGTTTTCGTTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTGGTAAGCAACTGAGTTTTCGTTGAAAAATGAAATAATATACAAGGGCATTAAAAAAAAGTCCACAAAAAAGGAGATCATATATCTGATTCTTTCTATTTCCATAACAATGCAATTAGCAAAAACATGAGACAAGCGAGATTCTGCATTCTTACTGATTGTTACACTTTAGTTATTTGCAGGAAAAACCTCCTGTAACGAGATTCCATGCTTTGATTCGTAAGTGCTGCCTTTTTTAAGTTTGGCTGGGAACATATTCTTGAGTAATAGTATTTTTTTTTTTTTTTGAACTCCTGCATTTCACTCTCAACCTTTTGTATTTGTTCTTTGAACCAGCTATCATCCAACAATGACTGTGGAAGGGATGCATGTCAAAGTTGTGGATCCAAACACTCGTAAAAACTGTTTGAGTGGATACATTTTTTTATTAGGGTCGGCACATATGGTAAGGCTCTGTTTTTTCATTTTCACATTCTTGAGAGTTGCTTAGCCTTATGGTCTTTTTATTCTGTGATATACTTAGTTAACCCAACATGTAGGGGTTTGAAATAAATAAAGTAAAGAAGGAAAAAAAATTTAAATCTCATTCCATTTCTACCTTATGACAAAATTTTCTCGGATGCTTGTGGTGTTTAGTACTATTCTTTAGTTTTCTGTGAAGAAATAACTCTTCTGGTGGATTGCTTAGACATTCAATAATTTTGATATTCAATTTCCTATCTTTTGGAAGTACAAATATGGGGATCGGTTGAAGATGCTATTACAACAAGTTGGTGGTGCAAATGTTTTGTCTATTGAGGACTTCTCTTCAGATAGCCAAAACGAGGTTTTATCTCTTTCCACATAGACTATATCCATTCTTTCCTAATTGCTTTGTGAAGGCGTGGGTAAAAACTACTGTTTGACTAATTTCATGTAAAAAGATTCTAATTCACAATATTTTTGACTGCAATATGGTCTTGTGAACAACATGAACTGCATTACTAATAAGCGTATGGGTTCTAGGATTGAGTGTTATGAATAATACATGCTTAATACACTTCATCAATTTGTTGACATGTAATAGATGTTTCGATATTGCAATGAAGTATAACTTGCATCACATGGGGCCATAATGATTGATTACAAAAACCATCTATATAGTTAATGTCAATGCCAATCGAATATTAATTACTATCCAACCAGTAAGGCTTAAGATGTGAGCTGTGTTTTAAAATATGTCTCAAATGGCGCCTTATGATCTTTGATTGGACTAAATACAACAACTCGACATCTTTATTTCATTTCTTTTATTTATTTCAGTTCTATGAACCTGGTGTTTATTGGGTAATTGATTTGTATGATAATTGTTGTAGGACTTTGGTAATGGAGAAAATGAACGGGTAGTATTCATTATTCCTGGAGGATTAGCAGAAAAGTTGGGTTCATCCTATAAGGTTGATTCTTATTATAAAATAGCTGAGTTGGTTTTGATATCTTCTGTTTTGAGTGGAAAGCTGGACAGAGACAATTTGATATCACCCTGTGGTAAGACGTCTTACTCACTACCAGTTTCATTTGTAGTATATTTACTCATTGTTAAAAACTGTTTATATTTCTTCATTTTAACTTCATTTATCTGACTGAATATAAAGTTCCTTTGCAGAACCAGGTTCCTCTACATGCTCCACTGATGAAACCGTGGTAGCAGAATCCGATCTCGAAGCAGAAACCGATAAACCAGTTGCTTCTAATGTCCAAGGTTCAGATGAACATTTAGGCATACCAGATGAACATTTAAGCAAACCAGAGGACTATTTAAGCAAACCAGAGGTGTCCATCGACCATGCTGCTTCTGGATCAGCTGGGGACCATAAAACATTCAGAAATAGTTACAGTGGAGTCAAAATGAGAAACGACCAGGTCGATGAATCTGACAACAGCAATATAGACATTATTTTCACCCAAAATTTAATCGTGCAACACGTGATGAAACCCTCATCAATAGTTACTGCAGAAGACGGTGGAATTACGAACTTCAAACGCTTCAGGAAGGTATTACTATTAGCCTCTGAATGTTATAATCTGCACCATTTCGTTTAACTGGTGTGCACATTACTGTTTGATATTGATGAAATCTTAGTTATATCTTCTTATTATGTCATAAGATCATTACCAATTCCCATTGATCGACCATTGTATGCATTTTTTAATCTTAAACGATGAACCAAATGATGGTCGTGATCATTTTTGCATTCAACTGTTCGAATATGCATTATTTAAGTAGCCGTAAAAACAGTGTTTGTTTCTCGTATAGGTGGCACATAGAGAAAAATGTTATGGAGGTTAATACGCACATCCTTTAAACTTTTTTGCAGACAGAAACTCACTCTGGGAATAGCTTTTATAATCTTGTTCCATTTGATAAGTATCCTTACAAGTAAGTGTTTTCTCATGTCTTGGAGTCATTTGGGATGTGTTTGGCGCATAGTAGAGACGCCATTACATATTCTTTCATGTTTATTTAATTGAAAGTTGGGTATCTCACGTTGAATTAATATGATATCTTTAAACATTTCAAGCCCGCACCTCGACCTCTGAATCTGATAAAGAAAATCACCTGCCATTGTTTTATGGGTTTCTAGGGATAACGGTGATGGAAGGGAAGAAATTGCAGAATCCTTGAAAGAGGAAAGAAAGCGCAAGGAAATGGAAGCTATATCTGAAGATTTATTTAATAACGAAAAGGTGAGTCTTTTTTACTTGTTTTAGCACCACAAGTTACAAACATGGCATGCATGAAGACATACATTTTTAACTTGCCCGACCTTCAGGGACGACGTCGTGGAATGGCCGGTTCCCTTCAACAGCTCCTTACTCGTTCTTAGAAACAGGTATCCATATTTGCATCAAAGAATTCTGTTTGTGTTTGCCTCTACTTTATTAGATAACTTGTTCTCTTTTGCACACATTTGCATGATATTGTCGTCAATCATGATCATATTTACCTCTTCTAACATTTAACTTGTGTTGTGGTAACATACTTACACGAGCATTTGTAGCTATGTTATCTCTAAGGATTCAACACGACTAGCTCGACAA

mRNA sequence

TTTTACTGTTCAATTTGATTGCCCTTTTCTTTTTCCCGCTCGCTTCGACCCTTCCATGGAATTGCTCATCAGCTGTTTAGCGCCATAGAAACCTATACTGGAAAAATATGGTTTGGGGCTTCTTCCCCGTCGATCCTCTTTCAGGTGAGGAAAAATTCTACATTTTTGCACCTGGGAAGTATAAAGTGGGTCGTAAAGGCTGCGATTTGACTATAACAAAAGATAAAGGAGTTTCCCGCATCCATGCAGAAATAGTTGTAGATGCTATGATATTTATAAATTCCCACAAGAGTTATTTATCTAATGTTTCCTCTAAAGTGAGGATTAGTGATTGCTCCAAGTATGGGACATTTGTTAGCAGGAAATCTGGGTTGAAGGAGAAAATTCACGAGCTTCCAAAAAAAGAAGCAAGCTTGTATGATGGAGATGTGATTTCATTTGGATCTGGCAATGCAACGTACAGGTTCTCCTTTGTGCAACTTGTGTTTTACGTTCACCATTCAGTGTCTTTCCAATTCCAGCTGCTGAGGGACAAGGTTTCATCCATAGGTGCTTCTACATCTCATGATATTCGGGAGTGTACGCATGTGCTTGTAGAGGAACTGATGCCTTTTGATGAAGCTCTAGTTGACGCCATAGTGGCTGAGAAACCTTTTGTTATCACAAGTTGGGTTGAGTTATTTGCAGGAAAAACCTCCTGTAACGAGATTCCATGCTTTGATTCCTATCATCCAACAATGACTGTGGAAGGGATGCATGTCAAAGTTGTGGATCCAAACACTCGTAAAAACTGTTTGAGTGGATACATTTTTTTATTAGGGTCGGCACATATGTACAAATATGGGGATCGGTTGAAGATGCTATTACAACAAGTTGGTGGTGCAAATGTTTTGTCTATTGAGGACTTCTCTTCAGATAGCCAAAACGAGGACTTTGGTAATGGAGAAAATGAACGGGTAGTATTCATTATTCCTGGAGGATTAGCAGAAAAGTTGGGTTCATCCTATAAGGTTGATTCTTATTATAAAATAGCTGAGTTGGTTTTGATATCTTCTGTTTTGAGTGGAAAGCTGGACAGAGACAATTTGATATCACCCTGTGAACCAGGTTCCTCTACATGCTCCACTGATGAAACCGTGGTAGCAGAATCCGATCTCGAAGCAGAAACCGATAAACCAGTTGCTTCTAATGTCCAAGGTTCAGATGAACATTTAGGCATACCAGATGAACATTTAAGCAAACCAGAGGACTATTTAAGCAAACCAGAGGTGTCCATCGACCATGCTGCTTCTGGATCAGCTGGGGACCATAAAACATTCAGAAATAGTTACAGTGGAGTCAAAATGAGAAACGACCAGGTCGATGAATCTGACAACAGCAATATAGACATTATTTTCACCCAAAATTTAATCGTGCAACACGTGATGAAACCCTCATCAATAGTTACTGCAGAAGACGGTGGAATTACGAACTTCAAACGCTTCAGGAAGACAGAAACTCACTCTGGGAATAGCTTTTATAATCTTGTTCCATTTGATAAGTATCCTTACAAGGATAACGGTGATGGAAGGGAAGAAATTGCAGAATCCTTGAAAGAGGAAAGAAAGCGCAAGGAAATGGAAGCTATATCTGAAGATTTATTTAATAACGAAAAGGGACGACGTCGTGGAATGGCCGGTTCCCTTCAACAGCTCCTTACTCGTTCTTAGAAACAGGTATCCATATTTGCATCAAAGAATTCTGTTTGTGTTTGCCTCTACTTTATTAGATAACTTGTTCTCTTTTGCACACATTTGCATGATATTGTCGTCAATCATGATCATATTTACCTCTTCTAACATTTAACTTGTGTTGTGGTAACATACTTACACGAGCATTTGTAGCTATGTTATCTCTAAGGATTCAACACGACTAGCTCGACAA

Coding sequence (CDS)

ATGGTTTGGGGCTTCTTCCCCGTCGATCCTCTTTCAGGTGAGGAAAAATTCTACATTTTTGCACCTGGGAAGTATAAAGTGGGTCGTAAAGGCTGCGATTTGACTATAACAAAAGATAAAGGAGTTTCCCGCATCCATGCAGAAATAGTTGTAGATGCTATGATATTTATAAATTCCCACAAGAGTTATTTATCTAATGTTTCCTCTAAAGTGAGGATTAGTGATTGCTCCAAGTATGGGACATTTGTTAGCAGGAAATCTGGGTTGAAGGAGAAAATTCACGAGCTTCCAAAAAAAGAAGCAAGCTTGTATGATGGAGATGTGATTTCATTTGGATCTGGCAATGCAACGTACAGGTTCTCCTTTGTGCAACTTGTGTTTTACGTTCACCATTCAGTGTCTTTCCAATTCCAGCTGCTGAGGGACAAGGTTTCATCCATAGGTGCTTCTACATCTCATGATATTCGGGAGTGTACGCATGTGCTTGTAGAGGAACTGATGCCTTTTGATGAAGCTCTAGTTGACGCCATAGTGGCTGAGAAACCTTTTGTTATCACAAGTTGGGTTGAGTTATTTGCAGGAAAAACCTCCTGTAACGAGATTCCATGCTTTGATTCCTATCATCCAACAATGACTGTGGAAGGGATGCATGTCAAAGTTGTGGATCCAAACACTCGTAAAAACTGTTTGAGTGGATACATTTTTTTATTAGGGTCGGCACATATGTACAAATATGGGGATCGGTTGAAGATGCTATTACAACAAGTTGGTGGTGCAAATGTTTTGTCTATTGAGGACTTCTCTTCAGATAGCCAAAACGAGGACTTTGGTAATGGAGAAAATGAACGGGTAGTATTCATTATTCCTGGAGGATTAGCAGAAAAGTTGGGTTCATCCTATAAGGTTGATTCTTATTATAAAATAGCTGAGTTGGTTTTGATATCTTCTGTTTTGAGTGGAAAGCTGGACAGAGACAATTTGATATCACCCTGTGAACCAGGTTCCTCTACATGCTCCACTGATGAAACCGTGGTAGCAGAATCCGATCTCGAAGCAGAAACCGATAAACCAGTTGCTTCTAATGTCCAAGGTTCAGATGAACATTTAGGCATACCAGATGAACATTTAAGCAAACCAGAGGACTATTTAAGCAAACCAGAGGTGTCCATCGACCATGCTGCTTCTGGATCAGCTGGGGACCATAAAACATTCAGAAATAGTTACAGTGGAGTCAAAATGAGAAACGACCAGGTCGATGAATCTGACAACAGCAATATAGACATTATTTTCACCCAAAATTTAATCGTGCAACACGTGATGAAACCCTCATCAATAGTTACTGCAGAAGACGGTGGAATTACGAACTTCAAACGCTTCAGGAAGACAGAAACTCACTCTGGGAATAGCTTTTATAATCTTGTTCCATTTGATAAGTATCCTTACAAGGATAACGGTGATGGAAGGGAAGAAATTGCAGAATCCTTGAAAGAGGAAAGAAAGCGCAAGGAAATGGAAGCTATATCTGAAGATTTATTTAATAACGAAAAGGGACGACGTCGTGGAATGGCCGGTTCCCTTCAACAGCTCCTTACTCGTTCTTAG

Protein sequence

MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSHKSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRFSFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAEKPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSAHMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEKLGSSYKVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDESDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS

Homology

[Close]

BLAST of CmaCh01G003680 vs. ExPASy Swiss-Prot
Match: Q0H8D7 (Nijmegen breakage syndrome 1 protein OS=Arabidopsis thaliana OX=3702 GN=NBS1 PE=1 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.3e-110
Identity = 236/547 (43.14%), Postives = 338/547 (61.79%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60
           MVWG FPVDPLSGE+K+YIF+ G YKVGRKGCD+ I KDKGVSRIHAE+  DA     S 
Sbjct: 1   MVWGLFPVDPLSGEDKYYIFSKGIYKVGRKGCDIIINKDKGVSRIHAELTFDATTVSTSR 60

Query: 61  KSYLSNVSSK--VRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATY 120
           ++  S+ +S   +R+ DCSKYGTFV    G K+K+HEL  KE  L DGDVI+FG+G+A Y
Sbjct: 61  RNKSSSDTSSFVIRVKDCSKYGTFVKTDLGTKDKVHELSNKEKILQDGDVIAFGTGSAIY 120

Query: 121 RFSFVQLVFYV-HHSVSFQF-QLLRDKVSSIGASTSHDI-RECTHVLVEELMPFDEALVD 180
           R S + LVFY+   S +F+  Q ++D VSSIGA  S  +  ECTHVL+E  M  +EAL++
Sbjct: 121 RLSLIPLVFYLCPSSETFKVDQPVQDAVSSIGARISPTLSEECTHVLLEPRMQVNEALIN 180

Query: 181 AIVAEKPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIF 240
           AI+A+K  ++T+WV L A K+ C+EIP +  Y P++ VE   V V++ N R+ CL G+ F
Sbjct: 181 AILAKKTIILTNWVMLLAEKSICSEIPGYSQYRPSVMVEEALVDVLELNVREKCLEGFTF 240

Query: 241 LLGSAHMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEK 300
           +L     Y++G     LL +V GA  ++IED SS SQ+  F  GE  R++ +IP    +K
Sbjct: 241 VLEPTDTYRFGCSFPSLL-EVCGAETVTIEDISSMSQDSQF--GEINRMICVIPKSAGDK 300

Query: 301 LGSSYKVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD 360
            G    +    ++ E+ L+ +V SG L   +LI P    SS+CSTDETVVA+S+ E E  
Sbjct: 301 FGRFKHLSLLSRVNEMDLVCAVFSGNLPSTSLIPPSVVISSSCSTDETVVADSEAEEEET 360

Query: 361 KPVASNVQGSDE--------HLGIPDEHLSKPEDYLSKPEV-SIDHAASGSAGDHKTFRN 420
                 +  +++         + I D  ++  E+  +  E  S++  A   +  H   +N
Sbjct: 361 TSSVHMIDATEKAETPEKPAAIVIEDSPVTILEETSNLNEFKSVNLLADTESRGHMDEKN 420

Query: 421 SYSGVKMRNDQVDESDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHS 480
           S   V +R D+ DE++    +II+TQ+LIV+ +     + +    G+ +FKRFRK     
Sbjct: 421 SSDSVTIRRDRNDEAETGKSEIIYTQDLIVRDLRSTRKVQSTGGEGVVDFKRFRKGNVTC 480

Query: 481 GNSFYNLVPFDKYPYKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSL 534
           GNSF +L+PF K PYK+      ++ + +KEE+KRK+MEAI+EDLF  EK R+RG AGS+
Sbjct: 481 GNSFSSLIPFAKDPYKEYDSW--DVTDFMKEEKKRKQMEAIAEDLFKTEKARKRGTAGSI 540

[Close]

BLAST of CmaCh01G003680 vs. ExPASy Swiss-Prot
Match: Q7XD82 (Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. japonica OX=39947 GN=NBS1 PE=1 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.1e-85
Identity = 201/557 (36.09%), Postives = 321/557 (57.63%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60
           MVW   PVD + G ++ YIFA G YKVGRK CD+ +  D  +SR+HAEIVV+ M+  +  
Sbjct: 1   MVWALTPVDTVRGAQRCYIFAAGTYKVGRKDCDVIVQTDTSISRVHAEIVVEKMVAWDPQ 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLK-EKIHELPKKEASLYDGDVISFGSGNATYR 120
               +N  S VR+ D SKYGTF ++  G +  ++H+   ++A L DGD ++FG+GNAT+R
Sbjct: 61  SGAPAN-PSYVRVVDRSKYGTFFNKVQGTQGSRLHK--DEDAMLADGDTVTFGTGNATFR 120

Query: 121 FSFVQLVFYVHHSVSFQFQ-LLRDKVSSIGA-STSHDIRECTHVLVEELMPFDEALVDAI 180
            SFV +V + H   S +    L+  ++SIGA +T     ECTHVLV+E       L+DA+
Sbjct: 121 LSFVPIVVFFHGKKSGRISPCLQAVMTSIGAYATRKWSDECTHVLVDESCSLTPELLDAV 180

Query: 181 VAEKPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLL 240
           +A+K  V+  W ++ A K    E+P    Y P +T++GM ++VV+    ++CL+GY F+L
Sbjct: 181 LAKKQIVLGDWFKVMAEKNIHTEMPSSTQYIPKLTLDGMEIQVVEIKLIESCLAGYTFIL 240

Query: 241 GSAHMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEKLG 300
           GS+  YK+GD+L  LL+   GA  L +++F ++SQ  D G GEN++ + ++P     +  
Sbjct: 241 GSSEKYKFGDKLHALLEST-GAKYLHVDEFCANSQ--DSGAGENDKDILLVPAKSPLEFS 300

Query: 301 SSYKVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAET--- 360
               +    KI ++ L +++LSG L+   +  P    +S+ STDET+V +SD+E +T   
Sbjct: 301 KIRGLFPLSKITDVKLFAAILSGHLEATAIEPPAYIVASSNSTDETIVVDSDVEIDTATS 360

Query: 361 DKPV-ASNVQGSDEHL--------GIPDE--------------HLSKPEDYLSKP---EV 420
           D  V AS  +   EH+         I +E              H  + +D + KP   +V
Sbjct: 361 DHTVAASKSEHHIEHISDDKKEVVAISEEDAVNLVEAKTSINLHSDQEKDEIVKPMEEDV 420

Query: 421 SIDHAASGSAGDHKTFRNSYSGVKMRNDQVDESDNSNIDIIFTQNLIVQHVMKPSSIVTA 480
            +    +   G      +     K+  D+  +S +    +I+TQNL+V+ +++ +   + 
Sbjct: 421 KVIEKTATMRGFKVEGEDIPVMTKVPKDETLDSRDETCHVIYTQNLVVKSILQSARAESI 480

Query: 481 EDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYKDNGDGREEIAESLKEERKRKEMEAIS 526
           E GGI NFKRFRK    SGNSF +L+P+ + PY+++   R  + + ++EE+KR++MEAI+
Sbjct: 481 ETGGI-NFKRFRKRGAVSGNSFKDLIPYSREPYRESDYERGTVTDFMREEKKRRQMEAIA 540

[Close]

BLAST of CmaCh01G003680 vs. ExPASy Swiss-Prot
Match: B8BHK8 (Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. indica OX=39946 GN=NBS1 PE=2 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 5.9e-84
Identity = 199/557 (35.73%), Postives = 320/557 (57.45%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60
           MVW   PVD + G ++ YIFA G YKVGRK CD+ +  D  +SR+HAEIVV+ M+  +  
Sbjct: 1   MVWALTPVDTVRGAQRCYIFAAGTYKVGRKDCDVIVQTDTSISRVHAEIVVEKMVAWDPQ 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLK-EKIHELPKKEASLYDGDVISFGSGNATYR 120
               +N  S VR+ D SKYGTF ++  G +  ++H+   ++A L DGD ++FG+G+AT+R
Sbjct: 61  SGAPAN-PSYVRVVDRSKYGTFFNKVQGTQGSRLHK--DEDAMLADGDTVTFGTGSATFR 120

Query: 121 FSFVQLVFYVHHSVSFQFQ-LLRDKVSSIGA-STSHDIRECTHVLVEELMPFDEALVDAI 180
            SFV +V + H   S +    L+  ++SIGA +T     ECTHVLV+E       L+DA+
Sbjct: 121 LSFVPIVVFFHGKKSGRISPSLQAVMTSIGAYATRKWSDECTHVLVDESCSLTPELLDAV 180

Query: 181 VAEKPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLL 240
           +A+K  V+  W ++ A K     +P    Y P +T++GM ++VV+    ++CL+GY F+L
Sbjct: 181 LAKKQIVLGDWFKVMAEKNIHTAMPSSTQYIPKLTLDGMEIQVVEIKLIESCLAGYTFIL 240

Query: 241 GSAHMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEKLG 300
           GS+  YK+GD+L  LL+   GA  L +++F ++SQ  D G GEN++ + ++P     +  
Sbjct: 241 GSSEKYKFGDKLHALLEST-GAKYLHVDEFCANSQ--DSGAGENDKDILLVPAKSPLEFS 300

Query: 301 SSYKVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAET--- 360
               +    KI ++ L +++LSG L+   +  P    +S+ STDET+V +SD+E +T   
Sbjct: 301 KISGLFPLSKITDVKLFAAILSGHLEATAIEPPAYIVASSNSTDETIVVDSDVEIDTATS 360

Query: 361 DKPV-ASNVQGSDEHL--------GIPDE--------------HLSKPEDYLSKP---EV 420
           D  V AS  +   EH+         I +E              H  + +D + KP   +V
Sbjct: 361 DHTVAASKSEHHIEHISDDKKEVVAISEEDAVNLVEAKTSINLHSYQEKDEIVKPMEEDV 420

Query: 421 SIDHAASGSAGDHKTFRNSYSGVKMRNDQVDESDNSNIDIIFTQNLIVQHVMKPSSIVTA 480
            +    +   G      +     K+  D+  +S +    +I+TQNL+V+ +++ +   + 
Sbjct: 421 KVIEKTATMRGFKVEGEDIPVMTKVPKDETLDSRDETCHVIYTQNLVVKSILQSARAESI 480

Query: 481 EDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYKDNGDGREEIAESLKEERKRKEMEAIS 526
           E GGI NFKRFRK    SGNSF +L+P+ + PY+++   R  + + ++EE+KR++MEAI+
Sbjct: 481 ETGGI-NFKRFRKRGAVSGNSFKDLIPYSREPYRESDYKRGTVIDFMREEKKRRQMEAIA 540

[Close]

BLAST of CmaCh01G003680 vs. ExPASy Swiss-Prot
Match: Q5I2W8 (Nibrin OS=Danio rerio OX=7955 GN=nbn PE=2 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 9.9e-07
Identity = 69/268 (25.75%), Postives = 110/268 (41.04%), Query Frame = 0


Query: 2   VWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSHK 61
           +W   P +  SG E   + A  +Y VGRK C++ +T D+ +SR+HA + V          
Sbjct: 1   MWKLQPTE--SGGESVILLAGQEYVVGRKNCEILLTNDQSISRVHAVLTV---------- 60

Query: 62  SYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRFS 121
                    V + D SKYGTFV+      EK+     K  +L  G  I+FG   +  +FS
Sbjct: 61  -----TEQAVTLKDSSKYGTFVN-----GEKLESGSTK--TLQTGYKITFGVFQS--KFS 120

Query: 122 FVQLVFYVHHSV---SFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIV 181
             +    V  S      +  L +D  S  G   S    +CTH LV   +      + A++
Sbjct: 121 LEKECIVVCSSCVDNEGKVTLSQDIRSVGGRLVSSWTSDCTH-LVMPTVKVTIKTICALL 180

Query: 182 AEKPFVITSWVELFAGKTSCN-EIPCFDSYHPTMTVEGMHVKVVDPNT---RKNCLSGYI 241
             +P V  ++    +        +P  + + P +    +    VD +    RK+   G  
Sbjct: 181 CCRPIVKPAFFSALSKAVQQKLPLPKAERFRPQIDEPSLARDDVDLSARPERKSLFKGKT 238

Query: 242 FLLGSAHMYKYGDRLKMLLQQVGGANVL 263
           FL  S+   K   RL + +   GG + L
Sbjct: 241 FLFLSSKQMK---RLSVAVSCGGGVSQL 238

[Close]

BLAST of CmaCh01G003680 vs. ExPASy TrEMBL
Match: A0A6J1KAH4 (nijmegen breakage syndrome 1 protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493152 PE=4 SV=1)

HSP 1 Score: 1056.6 bits (2731), Expect = 3.5e-305
Identity = 533/533 (100.00%), Postives = 533/533 (100.00%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
           KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA 240
           KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA
Sbjct: 181 KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA 240

Query: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEKLGSSY 300
           HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEKLGSSY
Sbjct: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEKLGSSY 300

Query: 301 KVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360
           KVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS
Sbjct: 301 KVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360

Query: 361 NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDE 420
           NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDE
Sbjct: 361 NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDE 420

Query: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP 480
           SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP
Sbjct: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP 480

Query: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS 534
           YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS
Sbjct: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS 533

[Close]

BLAST of CmaCh01G003680 vs. ExPASy TrEMBL
Match: A0A6J1K8B4 (nijmegen breakage syndrome 1 protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493152 PE=4 SV=1)

HSP 1 Score: 1047.7 bits (2708), Expect = 1.6e-302
Identity = 531/533 (99.62%), Postives = 531/533 (99.62%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
           KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA 240
           KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA
Sbjct: 181 KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA 240

Query: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEKLGSSY 300
           HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQ  DFGNGENERVVFIIPGGLAEKLGSSY
Sbjct: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQ--DFGNGENERVVFIIPGGLAEKLGSSY 300

Query: 301 KVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360
           KVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS
Sbjct: 301 KVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360

Query: 361 NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDE 420
           NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDE
Sbjct: 361 NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDE 420

Query: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP 480
           SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP
Sbjct: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP 480

Query: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS 534
           YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS
Sbjct: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS 531

[Close]

BLAST of CmaCh01G003680 vs. ExPASy TrEMBL
Match: A0A6J1GCD8 (nijmegen breakage syndrome 1 protein OS=Cucurbita moschata OX=3662 GN=LOC111452863 PE=4 SV=1)

HSP 1 Score: 1008.4 bits (2606), Expect = 1.1e-290
Identity = 514/533 (96.44%), Postives = 518/533 (97.19%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIF+NSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
           KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA 240
           KPFVITSWVELFAG+TSCNEIPCFDSY+PTMTVEGMHVKVVDPNTRKNCLSGY FLLGSA
Sbjct: 181 KPFVITSWVELFAGRTSCNEIPCFDSYYPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA 240

Query: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEKLGSSY 300
           HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQ  DFGNGENERVVFIIPGGLAEKLGSSY
Sbjct: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQ--DFGNGENERVVFIIPGGLAEKLGSSY 300

Query: 301 KVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360
           KVDSYYKI ELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS
Sbjct: 301 KVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360

Query: 361 NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDE 420
           NVQGSDEHLGIPDEH       LSKPEVSIDHA SGSAG HKTFRNSYSGVKMRND+VDE
Sbjct: 361 NVQGSDEHLGIPDEH-------LSKPEVSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDE 420

Query: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP 480
           SDNSNIDIIFTQNLIVQHVMKPSSIVTAED GITNFKRFRKTETHSGNSFYNLVPFDKYP
Sbjct: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDSGITNFKRFRKTETHSGNSFYNLVPFDKYP 480

Query: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS 534
           YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGM GSLQQLLTRS
Sbjct: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS 524

[Close]

BLAST of CmaCh01G003680 vs. ExPASy TrEMBL
Match: A0A6J1CQ04 (nijmegen breakage syndrome 1 protein OS=Momordica charantia OX=3673 GN=LOC111013240 PE=4 SV=1)

HSP 1 Score: 857.8 bits (2215), Expect = 2.4e-245
Identity = 439/536 (81.90%), Postives = 476/536 (88.81%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIF+NSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
            SYLSNVSSKVRISDCSKYGTFVSR SGLKEKIHELPKKEASL DGDV+SFGSGNATYRF
Sbjct: 61  GSYLSNVSSKVRISDCSKYGTFVSRNSGLKEKIHELPKKEASLCDGDVVSFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFV L+FYVH S SFQ QLLRDKVSSIGASTSHD  ECTHVLVEELM F+E L+DAI+AE
Sbjct: 121 SFVPLLFYVHCSESFQLQLLRDKVSSIGASTSHDSLECTHVLVEELMSFNEPLIDAIIAE 180

Query: 181 KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA 240
           KPFV++SWVELFAG+TSCNEIPC DSYHPTMTVEGMHVKVVDP TRKNCL GYIFLLGS 
Sbjct: 181 KPFVLSSWVELFAGRTSCNEIPCTDSYHPTMTVEGMHVKVVDPKTRKNCLIGYIFLLGST 240

Query: 241 HM-YKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEKLGSS 300
           HM YKYGDRLKMLLQQVGGANV SIE FSSDS  +D GNG+N+R+VF+ P G AEKL S 
Sbjct: 241 HMKYKYGDRLKMLLQQVGGANVSSIEGFSSDS--KDLGNGDNDRIVFVTPQGSAEKLDSF 300

Query: 301 YKVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPV- 360
           YKVDSYYKI ELVLISS+LSGKLDRDNLISPCEPGSSTCSTDETVVAESDLE ET KPV 
Sbjct: 301 YKVDSYYKINELVLISSILSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEVETAKPVD 360

Query: 361 -ASNVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQ 420
            ASNVQ              +P++YLSKP+V +++A +GSAG H+TF++ YS V+ R D+
Sbjct: 361 TASNVQ--------------RPDEYLSKPDVFVNNATTGSAGSHETFQDGYSSVETRKDK 420

Query: 421 VDESDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFD 480
           V+ESDN N+DIIF QNLIV+HV +PS+IVTAEDGG+TNFKRFRKTET SGNSFYNLVPF 
Sbjct: 421 VNESDNRNLDIIFNQNLIVRHVTEPSTIVTAEDGGVTNFKRFRKTETQSGNSFYNLVPFA 480

Query: 481 KYPYKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS 534
           KYPYKDNGDGREEIAESLKEERKRKE EAI+EDLF+NEKGRRRGM GSLQ+L TRS
Sbjct: 481 KYPYKDNGDGREEIAESLKEERKRKEKEAIAEDLFHNEKGRRRGMVGSLQELFTRS 520

[Close]

BLAST of CmaCh01G003680 vs. ExPASy TrEMBL
Match: A0A1S3C596 (nijmegen breakage syndrome 1 protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496815 PE=4 SV=1)

HSP 1 Score: 857.1 bits (2213), Expect = 4.0e-245
Identity = 435/533 (81.61%), Postives = 475/533 (89.12%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTI KDKGVSRIHAEI+VDAMI +NSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTIAKDKGVSRIHAEILVDAMIPLNSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
            S+LSN+ SKVRISDCSKYGTFV R SGLKEK+HEL KKEASL DGDV+SFGSGNATYRF
Sbjct: 61  NSHLSNICSKVRISDCSKYGTFVRRNSGLKEKLHELSKKEASLCDGDVVSFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFVQL+FYV+ S SFQ QLLRDKVSSIGA TSHDI+ECTHVLVEELMPF+EALVDAIVAE
Sbjct: 121 SFVQLLFYVNRSESFQSQLLRDKVSSIGACTSHDIQECTHVLVEELMPFNEALVDAIVAE 180

Query: 181 KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA 240
           KPFV+TSWVELFAGKT+CNEIP FDSY PTMTVEGMHVKVVDP+TRKNCLSGY FLLG  
Sbjct: 181 KPFVLTSWVELFAGKTTCNEIPSFDSYQPTMTVEGMHVKVVDPSTRKNCLSGYTFLLGLT 240

Query: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEKLGSSY 300
            MYKYGDRLKMLLQQVGGANVLSIEDFSSDSQ  D GNGEN+RVVF++PGG  EK  SS 
Sbjct: 241 QMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQ--DLGNGENDRVVFVMPGGSVEKWDSSS 300

Query: 301 KVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360
           KVDSYYKI EL+LISSVLSG LDRDNLI PCEPGSSTCSTDETVVAESDLE ET KPV S
Sbjct: 301 KVDSYYKITELILISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVS 360

Query: 361 NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDE 420
           NVQG       PDE+LSK ++YLS+  VS+D+A +GS G H+  +NS S ++MR D+++E
Sbjct: 361 NVQG-------PDEYLSKSDEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINE 420

Query: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP 480
           SDN NIDIIF+QNLIVQH  K S++VTAE+ GITNFKRFRKT+THSGNSF NLVPFDKYP
Sbjct: 421 SDNRNIDIIFSQNLIVQHATKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYP 480

Query: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS 534
           YKDNGDGREEIAESLKEER+RKE EAI+EDLF+NEKGRRRGMAGSLQ+L TRS
Sbjct: 481 YKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 524

[Close]

BLAST of CmaCh01G003680 vs. NCBI nr
Match: XP_022998556.1 (nijmegen breakage syndrome 1 protein isoform X1 [Cucurbita maxima])

HSP 1 Score: 1056.6 bits (2731), Expect = 7.1e-305
Identity = 533/533 (100.00%), Postives = 533/533 (100.00%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
           KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA 240
           KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA
Sbjct: 181 KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA 240

Query: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEKLGSSY 300
           HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEKLGSSY
Sbjct: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEKLGSSY 300

Query: 301 KVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360
           KVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS
Sbjct: 301 KVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360

Query: 361 NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDE 420
           NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDE
Sbjct: 361 NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDE 420

Query: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP 480
           SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP
Sbjct: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP 480

Query: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS 534
           YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS
Sbjct: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS 533

[Close]

BLAST of CmaCh01G003680 vs. NCBI nr
Match: XP_022998557.1 (nijmegen breakage syndrome 1 protein isoform X2 [Cucurbita maxima])

HSP 1 Score: 1047.7 bits (2708), Expect = 3.3e-302
Identity = 531/533 (99.62%), Postives = 531/533 (99.62%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
           KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA 240
           KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA
Sbjct: 181 KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA 240

Query: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEKLGSSY 300
           HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQ  DFGNGENERVVFIIPGGLAEKLGSSY
Sbjct: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQ--DFGNGENERVVFIIPGGLAEKLGSSY 300

Query: 301 KVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360
           KVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS
Sbjct: 301 KVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360

Query: 361 NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDE 420
           NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDE
Sbjct: 361 NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDE 420

Query: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP 480
           SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP
Sbjct: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP 480

Query: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS 534
           YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS
Sbjct: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS 531

[Close]

BLAST of CmaCh01G003680 vs. NCBI nr
Match: XP_023521477.1 (nijmegen breakage syndrome 1 protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1032.3 bits (2668), Expect = 1.4e-297
Identity = 521/533 (97.75%), Postives = 526/533 (98.69%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIF+NSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
           KSYLSNVSSKVRISDCSKYGTFVSR SGLKEKIHELPKKEASLYDGDVISFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRNSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA 240
           KPFVITSWVELFAG+TSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGY FLLGSA
Sbjct: 181 KPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA 240

Query: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEKLGSSY 300
           HMYK+GDRLKMLLQQVGGANVLSIEDFSSDSQ  DFGNGENERVVFIIPGGLAEKLGSSY
Sbjct: 241 HMYKHGDRLKMLLQQVGGANVLSIEDFSSDSQ--DFGNGENERVVFIIPGGLAEKLGSSY 300

Query: 301 KVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360
           KVDSYYKI ELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS
Sbjct: 301 KVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360

Query: 361 NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDE 420
           NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRND+VDE
Sbjct: 361 NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDKVDE 420

Query: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP 480
           SDNSNIDIIFTQNLI QHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP
Sbjct: 421 SDNSNIDIIFTQNLIAQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP 480

Query: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS 534
           YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGM GSLQ+LLTRS
Sbjct: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQRLLTRS 531

[Close]

BLAST of CmaCh01G003680 vs. NCBI nr
Match: KAG6607018.1 (Nijmegen breakage syndrome 1 protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1013.1 bits (2618), Expect = 9.1e-292
Identity = 516/533 (96.81%), Postives = 519/533 (97.37%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIF+NSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
           KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA 240
           KPFVITSWVELFAG+TSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGY FLLGSA
Sbjct: 181 KPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA 240

Query: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEKLGSSY 300
           HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQ  DFGNGENERVVFIIPGGLAEKLGSSY
Sbjct: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQ--DFGNGENERVVFIIPGGLAEKLGSSY 300

Query: 301 KVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360
           KVDSYYKI ELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS
Sbjct: 301 KVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360

Query: 361 NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDE 420
           NVQGSDEHLGIPDEH       LSKPEVSIDHA SGSAG HKTFRNSYSGVKMRND+VDE
Sbjct: 361 NVQGSDEHLGIPDEH-------LSKPEVSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDE 420

Query: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP 480
           SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP
Sbjct: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP 480

Query: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS 534
           YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGM GSLQQLLTRS
Sbjct: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS 524

[Close]

BLAST of CmaCh01G003680 vs. NCBI nr
Match: XP_022949548.1 (nijmegen breakage syndrome 1 protein [Cucurbita moschata])

HSP 1 Score: 1008.4 bits (2606), Expect = 2.2e-290
Identity = 514/533 (96.44%), Postives = 518/533 (97.19%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIF+NSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
           KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA 240
           KPFVITSWVELFAG+TSCNEIPCFDSY+PTMTVEGMHVKVVDPNTRKNCLSGY FLLGSA
Sbjct: 181 KPFVITSWVELFAGRTSCNEIPCFDSYYPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA 240

Query: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEKLGSSY 300
           HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQ  DFGNGENERVVFIIPGGLAEKLGSSY
Sbjct: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQ--DFGNGENERVVFIIPGGLAEKLGSSY 300

Query: 301 KVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360
           KVDSYYKI ELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS
Sbjct: 301 KVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360

Query: 361 NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDE 420
           NVQGSDEHLGIPDEH       LSKPEVSIDHA SGSAG HKTFRNSYSGVKMRND+VDE
Sbjct: 361 NVQGSDEHLGIPDEH-------LSKPEVSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDE 420

Query: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP 480
           SDNSNIDIIFTQNLIVQHVMKPSSIVTAED GITNFKRFRKTETHSGNSFYNLVPFDKYP
Sbjct: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDSGITNFKRFRKTETHSGNSFYNLVPFDKYP 480

Query: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS 534
           YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGM GSLQQLLTRS
Sbjct: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS 524

[Close]

BLAST of CmaCh01G003680 vs. TAIR 10
Match: AT3G02680.1 (nijmegen breakage syndrome 1 )

HSP 1 Score: 401.7 bits (1031), Expect = 8.9e-112
Identity = 236/547 (43.14%), Postives = 338/547 (61.79%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60
           MVWG FPVDPLSGE+K+YIF+ G YKVGRKGCD+ I KDKGVSRIHAE+  DA     S 
Sbjct: 1   MVWGLFPVDPLSGEDKYYIFSKGIYKVGRKGCDIIINKDKGVSRIHAELTFDATTVSTSR 60

Query: 61  KSYLSNVSSK--VRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATY 120
           ++  S+ +S   +R+ DCSKYGTFV    G K+K+HEL  KE  L DGDVI+FG+G+A Y
Sbjct: 61  RNKSSSDTSSFVIRVKDCSKYGTFVKTDLGTKDKVHELSNKEKILQDGDVIAFGTGSAIY 120

Query: 121 RFSFVQLVFYV-HHSVSFQF-QLLRDKVSSIGASTSHDI-RECTHVLVEELMPFDEALVD 180
           R S + LVFY+   S +F+  Q ++D VSSIGA  S  +  ECTHVL+E  M  +EAL++
Sbjct: 121 RLSLIPLVFYLCPSSETFKVDQPVQDAVSSIGARISPTLSEECTHVLLEPRMQVNEALIN 180

Query: 181 AIVAEKPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIF 240
           AI+A+K  ++T+WV L A K+ C+EIP +  Y P++ VE   V V++ N R+ CL G+ F
Sbjct: 181 AILAKKTIILTNWVMLLAEKSICSEIPGYSQYRPSVMVEEALVDVLELNVREKCLEGFTF 240

Query: 241 LLGSAHMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEK 300
           +L     Y++G     LL +V GA  ++IED SS SQ+  F  GE  R++ +IP    +K
Sbjct: 241 VLEPTDTYRFGCSFPSLL-EVCGAETVTIEDISSMSQDSQF--GEINRMICVIPKSAGDK 300

Query: 301 LGSSYKVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETD 360
            G    +    ++ E+ L+ +V SG L   +LI P    SS+CSTDETVVA+S+ E E  
Sbjct: 301 FGRFKHLSLLSRVNEMDLVCAVFSGNLPSTSLIPPSVVISSSCSTDETVVADSEAEEEET 360

Query: 361 KPVASNVQGSDE--------HLGIPDEHLSKPEDYLSKPEV-SIDHAASGSAGDHKTFRN 420
                 +  +++         + I D  ++  E+  +  E  S++  A   +  H   +N
Sbjct: 361 TSSVHMIDATEKAETPEKPAAIVIEDSPVTILEETSNLNEFKSVNLLADTESRGHMDEKN 420

Query: 421 SYSGVKMRNDQVDESDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHS 480
           S   V +R D+ DE++    +II+TQ+LIV+ +     + +    G+ +FKRFRK     
Sbjct: 421 SSDSVTIRRDRNDEAETGKSEIIYTQDLIVRDLRSTRKVQSTGGEGVVDFKRFRKGNVTC 480

Query: 481 GNSFYNLVPFDKYPYKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSL 534
           GNSF +L+PF K PYK+      ++ + +KEE+KRK+MEAI+EDLF  EK R+RG AGS+
Sbjct: 481 GNSFSSLIPFAKDPYKEYDSW--DVTDFMKEEKKRKQMEAIAEDLFKTEKARKRGTAGSI 540

The following BLAST results are available for this feature:

BLAST of CmaCh01G003680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0H8D7	1.3e-110	43.14	Nijmegen breakage syndrome 1 protein OS=Arabidopsis thaliana OX=3702 GN=NBS1 PE=...	[more]
Q7XD82	1.1e-85	36.09	Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
B8BHK8	5.9e-84	35.73	Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. indica OX=39946 GN=N...	[more]
Q5I2W8	9.9e-07	25.75	Nibrin OS=Danio rerio OX=7955 GN=nbn PE=2 SV=2	[more]

BLAST of CmaCh01G003680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KAH4	3.5e-305	100.00	nijmegen breakage syndrome 1 protein isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1K8B4	1.6e-302	99.62	nijmegen breakage syndrome 1 protein isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GCD8	1.1e-290	96.44	nijmegen breakage syndrome 1 protein OS=Cucurbita moschata OX=3662 GN=LOC1114528...	[more]
A0A6J1CQ04	2.4e-245	81.90	nijmegen breakage syndrome 1 protein OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A1S3C596	4.0e-245	81.61	nijmegen breakage syndrome 1 protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of CmaCh01G003680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022998556.1	7.1e-305	100.00	nijmegen breakage syndrome 1 protein isoform X1 [Cucurbita maxima]	[more]
XP_022998557.1	3.3e-302	99.62	nijmegen breakage syndrome 1 protein isoform X2 [Cucurbita maxima]	[more]
XP_023521477.1	1.4e-297	97.75	nijmegen breakage syndrome 1 protein [Cucurbita pepo subsp. pepo]	[more]
KAG6607018.1	9.1e-292	96.81	Nijmegen breakage syndrome 1 protein, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_022949548.1	2.2e-290	96.44	nijmegen breakage syndrome 1 protein [Cucurbita moschata]	[more]

BLAST of CmaCh01G003680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02680.1	8.9e-112	43.14	nijmegen breakage syndrome 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.200.20		coord: 6..124 e-value: 2.6E-15 score: 58.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 349..374
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 507..533
IPR000253	Forkhead-associated (FHA) domain	PFAM	PF00498	FHA	coord: 25..112 e-value: 3.3E-11 score: 43.4
IPR000253	Forkhead-associated (FHA) domain	PROSITE	PS50006	FHA_DOMAIN	coord: 25..84 score: 9.580199
IPR000253	Forkhead-associated (FHA) domain	CDD	cd00060	FHA	coord: 2..121 e-value: 1.74272E-10 score: 55.8554
IPR040227	Nibrin-related	PANTHER	PTHR12162	NIBRIN-RELATED	coord: 378..516 coord: 2..377
IPR008984	SMAD/FHA domain superfamily	SUPERFAMILY	49879	SMAD/FHA domain	coord: 13..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G003680.1	CmaCh01G003680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006302	double-strand break repair
biological_process	GO:0007095	mitotic G2 DNA damage checkpoint signaling
cellular_component	GO:0030870	Mre11 complex
molecular_function	GO:0005515	protein binding