CmaCh01G003170 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh01G003170
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCma_Chr01: 1526369 .. 1528201 (-)
RNA-Seq ExpressionCmaCh01G003170
SyntenyCmaCh01G003170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATATTTTTCATTTTCTTCACGAACTCCAACTCTGCGCCAGACGCCAATCCACAGCAGCCGCCGGGAAGCTCCATTCTCAGATCATCAAAGCCGGGCTCGACAAAGCTGGCCCTCTCCCCAACACCCTTTTAGATGTATACGGAAAATGCGGCCTCATTCCTCAAGCCCTCCAACTGTTCGACGAAATGCCCCACAGAGACCATGTCTCCTGGGCCTCGATTCTCACCGCCCATAACCGAGCCATTCTTCCCCGACGTACCCTTTCAATGCTTAGCATCATGTTTACGCATGATGGGTTGCAGCCTGATCACTTTGTCTTCGCCTGCATCGTCAGTGCCTGCGCCAGTTTGGGGTATTTGCGGCTTGGTAAACAAGTTCATGCTCGGTTTATGTTGTCTTCCTTTTGTGATGATGAGGTTGTTAAGTCGTCTTTGATTGATATGTATGCTAAATGTGGGATGCCCGATGATGCTCGTGCTGTTTTTGATTCAATCTCGTTTAAGAATTCTGTGTCTTGGACTGCTATGATTTCTGGGTATGCTAAATCTGGGAGGAAATCTGATGCTATTGAGCTTTTTCAGCGAGTTCCTGTGAGAAACTTGTTCTCTTGGACTGCTTTGATTTCTGGGTTGATTCAAAGTGGGAATGGAATTTACTCGTTTTCTTTGTTTAATGAGATGAGGAGAGAAGGAATTGATGTTGTAGACCCTTTAGTTTTCTCGAGTGTTGTTGGAGCTTGTGCAAATTTGGCTCTTCTGGAACTTGGAAAGCAAATTCATGGCTTGGTTATAGCTCTTGGTTTTGAATCTTGTTTGTTTATAAGCAATGCACTTGTGGATATGTATGCTAAATGTAGTGACATATTAGCAGCTAAGGATATCTTTTACAAAATGCCACGAAAAGATGTGATTTCTTGGACTTCAATCATAGTTGGGACTGCTCAACATGGGAAAGCAGAGGAGGCATTGAGTTTATATGATGAAATGGTTTTGAGTGGAATCAAGCCAAATGAAGTGACTTTCGTAGGATTACTTTATGCTTGCAGTCATGTTGGTCTAGTTACCAAAGGCCGTGAATTATTTAGGTCCATGACAGCTGATTATAAGATCAATCCTTCTCTCCAGCACTACACATGTTTATTAGATCTCCTGAGTCGCTCAGGACACCTTGAAGAGGCAGAGAATCTACTAAACAAAATGCCATTTAAACCAGATGAGCCTACTTGGGCTTCCCTATTGAGTGCCTGCAAGCGACATAATAACATGGAAATGGGGGTTCGAATTGCTGATCATGTCTTGGATTTAAAACCCGAAGATCCTTCGACTTACATACTCTTATCGAATGTTTACGCCGGAGCGGAAATGTGGGACAGTGTTTCGAAGGTGAGAAGGTTGATGAGTTGTATGGAAGTAAGGAAGGAACCAGGTTATAGTAGCATAGACTTTGGAAAGGAGAGTCAAGTATTTCATGCTGGGGAGACTAATCATCCTATGAAGGAAGAGATTTTTCATTTACTGAAGGATTTAGATGCTGGAATGAGGAGAAGAGGCTATGTTCCTAACACTAGCTTTGTTTTGCATGACATGGAACAACAAGAGAAGGAGAAGCAGCTGTTTTGGCACAGTGAGAGGTTGGCTATGGCTTATGGACTTCTCAAGGCTGTTCCGGGGACGGTTATTCGAATCGTGAAAAATCTTCGGATTTGTGGAGATTGTCATAATGTTTTGAAATTCACTAGTGATATAGTGAAAAGGGAGATTGTTGTTCGTGATGCCACGAGATATCATCATTTCAAGGACGGGAAATGTTCTTGCAATGATTTTTGGTGA

mRNA sequence

ATGAATATTTTTCATTTTCTTCACGAACTCCAACTCTGCGCCAGACGCCAATCCACAGCAGCCGCCGGGAAGCTCCATTCTCAGATCATCAAAGCCGGGCTCGACAAAGCTGGCCCTCTCCCCAACACCCTTTTAGATGTATACGGAAAATGCGGCCTCATTCCTCAAGCCCTCCAACTGTTCGACGAAATGCCCCACAGAGACCATGTCTCCTGGGCCTCGATTCTCACCGCCCATAACCGAGCCATTCTTCCCCGACGTACCCTTTCAATGCTTAGCATCATGTTTACGCATGATGGGTTGCAGCCTGATCACTTTGTCTTCGCCTGCATCGTCAGTGCCTGCGCCAGTTTGGGGTATTTGCGGCTTGGTAAACAAGTTCATGCTCGGTTTATGTTGTCTTCCTTTTGTGATGATGAGGTTGTTAAGTCGTCTTTGATTGATATGTATGCTAAATGTGGGATGCCCGATGATGCTCGTGCTGTTTTTGATTCAATCTCGTTTAAGAATTCTGTGTCTTGGACTGCTATGATTTCTGGGTATGCTAAATCTGGGAGGAAATCTGATGCTATTGAGCTTTTTCAGCGAGTTCCTGTGAGAAACTTGTTCTCTTGGACTGCTTTGATTTCTGGGTTGATTCAAAGTGGGAATGGAATTTACTCGTTTTCTTTGTTTAATGAGATGAGGAGAGAAGGAATTGATGTTGTAGACCCTTTAGTTTTCTCGAGTGTTGTTGGAGCTTGTGCAAATTTGGCTCTTCTGGAACTTGGAAAGCAAATTCATGGCTTGGTTATAGCTCTTGGTTTTGAATCTTGTTTGTTTATAAGCAATGCACTTGTGGATATGTATGCTAAATGTAGTGACATATTAGCAGCTAAGGATATCTTTTACAAAATGCCACGAAAAGATGTGATTTCTTGGACTTCAATCATAGTTGGGACTGCTCAACATGGGAAAGCAGAGGAGGCATTGAGTTTATATGATGAAATGGTTTTGAGTGGAATCAAGCCAAATGAAGTGACTTTCGTAGGATTACTTTATGCTTGCAGTCATGTTGGTCTAGTTACCAAAGGCCGTGAATTATTTAGGTCCATGACAGCTGATTATAAGATCAATCCTTCTCTCCAGCACTACACATGTTTATTAGATCTCCTGAGTCGCTCAGGACACCTTGAAGAGGCAGAGAATCTACTAAACAAAATGCCATTTAAACCAGATGAGCCTACTTGGGCTTCCCTATTGAGTGCCTGCAAGCGACATAATAACATGGAAATGGGGGTTCGAATTGCTGATCATGTCTTGGATTTAAAACCCGAAGATCCTTCGACTTACATACTCTTATCGAATGTTTACGCCGGAGCGGAAATGTGGGACAGTGTTTCGAAGGTGAGAAGGTTGATGAGTTGTATGGAAGTAAGGAAGGAACCAGGTTATAGTAGCATAGACTTTGGAAAGGAGAGTCAAGTATTTCATGCTGGGGAGACTAATCATCCTATGAAGGAAGAGATTTTTCATTTACTGAAGGATTTAGATGCTGGAATGAGGAGAAGAGGCTATGTTCCTAACACTAGCTTTGTTTTGCATGACATGGAACAACAAGAGAAGGAGAAGCAGCTGTTTTGGCACAGTGAGAGGTTGGCTATGGCTTATGGACTTCTCAAGGCTGTTCCGGGGACGGTTATTCGAATCGTGAAAAATCTTCGGATTTGTGGAGATTGTCATAATGTTTTGAAATTCACTAGTGATATAGTGAAAAGGGAGATTGTTGTTCGTGATGCCACGAGATATCATCATTTCAAGGACGGGAAATGTTCTTGCAATGATTTTTGGTGA

Coding sequence (CDS)

ATGAATATTTTTCATTTTCTTCACGAACTCCAACTCTGCGCCAGACGCCAATCCACAGCAGCCGCCGGGAAGCTCCATTCTCAGATCATCAAAGCCGGGCTCGACAAAGCTGGCCCTCTCCCCAACACCCTTTTAGATGTATACGGAAAATGCGGCCTCATTCCTCAAGCCCTCCAACTGTTCGACGAAATGCCCCACAGAGACCATGTCTCCTGGGCCTCGATTCTCACCGCCCATAACCGAGCCATTCTTCCCCGACGTACCCTTTCAATGCTTAGCATCATGTTTACGCATGATGGGTTGCAGCCTGATCACTTTGTCTTCGCCTGCATCGTCAGTGCCTGCGCCAGTTTGGGGTATTTGCGGCTTGGTAAACAAGTTCATGCTCGGTTTATGTTGTCTTCCTTTTGTGATGATGAGGTTGTTAAGTCGTCTTTGATTGATATGTATGCTAAATGTGGGATGCCCGATGATGCTCGTGCTGTTTTTGATTCAATCTCGTTTAAGAATTCTGTGTCTTGGACTGCTATGATTTCTGGGTATGCTAAATCTGGGAGGAAATCTGATGCTATTGAGCTTTTTCAGCGAGTTCCTGTGAGAAACTTGTTCTCTTGGACTGCTTTGATTTCTGGGTTGATTCAAAGTGGGAATGGAATTTACTCGTTTTCTTTGTTTAATGAGATGAGGAGAGAAGGAATTGATGTTGTAGACCCTTTAGTTTTCTCGAGTGTTGTTGGAGCTTGTGCAAATTTGGCTCTTCTGGAACTTGGAAAGCAAATTCATGGCTTGGTTATAGCTCTTGGTTTTGAATCTTGTTTGTTTATAAGCAATGCACTTGTGGATATGTATGCTAAATGTAGTGACATATTAGCAGCTAAGGATATCTTTTACAAAATGCCACGAAAAGATGTGATTTCTTGGACTTCAATCATAGTTGGGACTGCTCAACATGGGAAAGCAGAGGAGGCATTGAGTTTATATGATGAAATGGTTTTGAGTGGAATCAAGCCAAATGAAGTGACTTTCGTAGGATTACTTTATGCTTGCAGTCATGTTGGTCTAGTTACCAAAGGCCGTGAATTATTTAGGTCCATGACAGCTGATTATAAGATCAATCCTTCTCTCCAGCACTACACATGTTTATTAGATCTCCTGAGTCGCTCAGGACACCTTGAAGAGGCAGAGAATCTACTAAACAAAATGCCATTTAAACCAGATGAGCCTACTTGGGCTTCCCTATTGAGTGCCTGCAAGCGACATAATAACATGGAAATGGGGGTTCGAATTGCTGATCATGTCTTGGATTTAAAACCCGAAGATCCTTCGACTTACATACTCTTATCGAATGTTTACGCCGGAGCGGAAATGTGGGACAGTGTTTCGAAGGTGAGAAGGTTGATGAGTTGTATGGAAGTAAGGAAGGAACCAGGTTATAGTAGCATAGACTTTGGAAAGGAGAGTCAAGTATTTCATGCTGGGGAGACTAATCATCCTATGAAGGAAGAGATTTTTCATTTACTGAAGGATTTAGATGCTGGAATGAGGAGAAGAGGCTATGTTCCTAACACTAGCTTTGTTTTGCATGACATGGAACAACAAGAGAAGGAGAAGCAGCTGTTTTGGCACAGTGAGAGGTTGGCTATGGCTTATGGACTTCTCAAGGCTGTTCCGGGGACGGTTATTCGAATCGTGAAAAATCTTCGGATTTGTGGAGATTGTCATAATGTTTTGAAATTCACTAGTGATATAGTGAAAAGGGAGATTGTTGTTCGTGATGCCACGAGATATCATCATTTCAAGGACGGGAAATGTTCTTGCAATGATTTTTGGTGA

Protein sequence

MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQLFDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGYLRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISGYAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLVFSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMPRKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRELFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRHNNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYSSIDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHDMEQQEKEKQLFWHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFKDGKCSCNDFW
Homology
[Close]
BLAST of CmaCh01G003170 vs. ExPASy Swiss-Prot
Match: O23266 (Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H13 PE=1 SV=3)

HSP 1 Score: 876.7 bits (2264), Expect = 1.5e-253
Identity = 411/612 (67.16%), Postives = 511/612 (83.50%), Query Frame = 0 

Query: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL 60
           M I H+LH+LQLCAR ++   A  LH+ I+K G+ +  PL NTL++VYGKCG    ALQ+
Sbjct: 1   MLIPHYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQV 60

Query: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120
           FDEMPHRDH++WAS+LTA N+A L  +TLS+ S + +  GL+PD FVF+ +V ACA+LG 
Sbjct: 61  FDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGS 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG 180
           +  G+QVH  F++S + +DEVVKSSL+DMYAKCG+ + A+AVFDSI  KN++SWTAM+SG
Sbjct: 121 IDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSG 180

Query: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240
           YAKSGRK +A+ELF+ +PV+NL+SWTALISG +QSG G+ +FS+F EMRRE +D++DPLV
Sbjct: 181 YAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLV 240

Query: 241 FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP 300
            SS+VGACANLA    G+Q+HGLVIALGF+SC+FISNAL+DMYAKCSD++AAKDIF +M 
Sbjct: 241 LSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMR 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360
            +DV+SWTS+IVG AQHG+AE+AL+LYD+MV  G+KPNEVTFVGL+YACSHVG V KGRE
Sbjct: 301 HRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRE 360

Query: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420
           LF+SMT DY I PSLQHYTCLLDLL RSG L+EAENL++ MPF PDEPTWA+LLSACKR 
Sbjct: 361 LFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQ 420

Query: 421 NNMEMGVRIADH-VLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYS 480
              +MG+RIADH V   K +DPSTYILLSN+YA A +W  VS+ RR +  MEVRK+PG+S
Sbjct: 421 GRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHS 480

Query: 481 SIDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMR-RRGYVPNTSFVLHDMEQQEKEKQ 540
           S++  KE++VF+AGET+HP+KE+IF LLK L+  MR R GYVP+TS++LHDM++QEKEK 
Sbjct: 481 SVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKL 540

Query: 541 LFWHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHH 600
           LFWHSER A+AYGLLKAVPGT IRIVKNLR+CGDCH VLK  S+I +REI+VRDATRYHH
Sbjct: 541 LFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHH 600

Query: 601 FKDGKCSCNDFW 611
           FK GKCSCNDFW
Sbjct: 601 FKGGKCSCNDFW 612

[Close]
BLAST of CmaCh01G003170 vs. ExPASy Swiss-Prot
Match: Q9FRI5 (Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H74 PE=2 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 5.2e-137
Identity = 250/624 (40.06%), Postives = 369/624 (59.13%), Query Frame = 0 

Query: 24  KLHSQIIKAGLDKAGPLPNTLLDVYGKC----GLIPQALQLFDEMPHRDHVSWASILT-- 83
           + H+  +K+G      + N L+ VY KC     L+  A ++FDE+  +D  SW +++T  
Sbjct: 170 QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGY 229

Query: 84  -----------------------AHNRAI-------LPRRTLSMLSIMFTHDGLQPDHFV 143
                                  A+N  I         +  L M+  M +  G++ D F 
Sbjct: 230 VKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS-SGIELDEFT 289

Query: 144 FACIVSACASLGYLRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSIS 203
           +  ++ ACA+ G L+LGKQVHA ++L          +SL+ +Y KCG  D+ARA+F+ + 
Sbjct: 290 YPSVIRACATAGLLQLGKQVHA-YVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP 349

Query: 204 FKNSVSWTAMISGYAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNE 263
            K+ VSW A++SGY  SG   +A  +F+ +  +N+ SW  +ISGL ++G G     LF+ 
Sbjct: 350 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 409

Query: 264 MRREGIDVVDPLVFSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCS 323
           M+REG +  D   FS  + +CA L     G+Q H  ++ +GF+S L   NAL+ MYAKC 
Sbjct: 410 MKREGFEPCD-YAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCG 469

Query: 324 DILAAKDIFYKMPRKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLY 383
            +  A+ +F  MP  D +SW ++I    QHG   EA+ +Y+EM+  GI+P+ +T + +L 
Sbjct: 470 VVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLT 529

Query: 384 ACSHVGLVTKGRELFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDE 443
           ACSH GLV +GR+ F SM   Y+I P   HY  L+DLL RSG   +AE+++  +PFKP  
Sbjct: 530 ACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTA 589

Query: 444 PTWASLLSACKRHNNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLM 503
             W +LLS C+ H NME+G+  AD +  L PE   TY+LLSN++A    W+ V++VR+LM
Sbjct: 590 EIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLM 649

Query: 504 SCMEVRKEPGYSSIDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVL 563
               V+KE   S I+   +   F   +T+HP  E ++  L+DL   MRR GYVP+TSFVL
Sbjct: 650 RDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVL 709

Query: 564 HDMEQQ-EKEKQLFWHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKR 611
           HD+E    KE  L  HSE++A+A+GL+K  PGT IRI KNLR CGDCHN  +F S +V+R
Sbjct: 710 HDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQR 769

[Close]
BLAST of CmaCh01G003170 vs. ExPASy Swiss-Prot
Match: O23169 (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H5 PE=3 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 3.0e-132
Identity = 239/632 (37.82%), Postives = 368/632 (58.23%), Query Frame = 0 

Query: 10  LQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKC------------------ 69
           +Q+C++ ++     K+H  I  +G      + N LL +Y KC                  
Sbjct: 92  IQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDL 151

Query: 70  -------------GLIPQALQLFDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTH 129
                        GL+ +A +LFDEM  +D  SW +++T + +   P   L + S+M   
Sbjct: 152 CSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRV 211

Query: 130 DGLQPDHFVFACIVSACASLGYLRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDD 189
              +P+ F  +  V+A A++  +R GK++H   + +    DEV+ SSL+DMY KCG  D+
Sbjct: 212 PNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDE 271

Query: 190 ARAVFDSISFKNSVSWTAMISGYAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNG 249
           AR +FD I  K+ VSWT+MI  Y KS R                  W             
Sbjct: 272 ARNIFDKIVEKDVVSWTSMIDRYFKSSR------------------WRE----------- 331

Query: 250 IYSFSLFNEMRREGIDVVDPLVFSSVVGACANLALLELGKQIHGLVIALGFESCLFISNA 309
              FSLF+E+     +  +   F+ V+ ACA+L   ELGKQ+HG +  +GF+   F S++
Sbjct: 332 --GFSLFSEL-VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSS 391

Query: 310 LVDMYAKCSDILAAKDIFYKMPRKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPN 369
           LVDMY KC +I +AK +    P+ D++SWTS+I G AQ+G+ +EAL  +D ++ SG KP+
Sbjct: 392 LVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 451

Query: 370 EVTFVGLLYACSHVGLVTKGRELFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLL 429
            VTFV +L AC+H GLV KG E F S+T  ++++ +  HYTCL+DLL+RSG  E+ ++++
Sbjct: 452 HVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVI 511

Query: 430 NKMPFKPDEPTWASLLSACKRHNNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWD 489
           ++MP KP +  WAS+L  C  + N+++    A  +  ++PE+P TY+ ++N+YA A  W+
Sbjct: 512 SEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWE 571

Query: 490 SVSKVRRLMSCMEVRKEPGYSSIDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRG 549
              K+R+ M  + V K PG S  +  ++  VF A +T+HPM  +I   L++L   M+  G
Sbjct: 572 EEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEG 631

Query: 550 YVPNTSFVLHDMEQQEKEKQLFWHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLK 609
           YVP TS VLHD+E ++KE+ L +HSE+LA+A+ +L    GT I++ KNLR C DCH  +K
Sbjct: 632 YVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIK 691

Query: 610 FTSDIVKREIVVRDATRYHHFKDGKCSCNDFW 611
           F S+I KR+I VRD+TR+H F++G+CSC D+W
Sbjct: 692 FISNITKRKITVRDSTRFHCFENGQCSCGDYW 691

[Close]
BLAST of CmaCh01G003170 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 5.1e-132
Identity = 236/570 (41.40%), Postives = 353/570 (61.93%), Query Frame = 0 

Query: 42  NTLLDVYGKCGLIPQALQLFDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGL 101
           N LL  + K   I +A Q FD M  RD VSW +I+T + ++      +     +F    +
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQS----GKIDEARQLFDESPV 282

Query: 102 QPDHFVFACIVSACASLGYLRLGKQVHARFMLSSFCD-DEVVKSSLIDMYAKCGMPDDAR 161
           Q D F +  +VS     GY++      AR +     + +EV  ++++  Y +    + A+
Sbjct: 283 Q-DVFTWTAMVS-----GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAK 342

Query: 162 AVFDSISFKNSVSWTAMISGYAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIY 221
            +FD +  +N  +W  MI+GYA+ G+ S+A  LF ++P R+  SW A+I+G  QSG+   
Sbjct: 343 ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE 402

Query: 222 SFSLFNEMRREGIDVVDPLVFSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALV 281
           +  LF +M REG   ++   FSS +  CA++  LELGKQ+HG ++  G+E+  F+ NAL+
Sbjct: 403 ALRLFVQMEREG-GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALL 462

Query: 282 DMYAKCSDILAAKDIFYKMPRKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEV 341
            MY KC  I  A D+F +M  KD++SW ++I G ++HG  E AL  ++ M   G+KP++ 
Sbjct: 463 LMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA 522

Query: 342 TFVGLLYACSHVGLVTKGRELFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNK 401
           T V +L ACSH GLV KGR+ F +MT DY + P+ QHY C++DLL R+G LE+A NL+  
Sbjct: 523 TMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKN 582

Query: 402 MPFKPDEPTWASLLSACKRHNNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSV 461
           MPF+PD   W +LL A + H N E+    AD +  ++PE+   Y+LLSN+YA +  W  V
Sbjct: 583 MPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDV 642

Query: 462 SKVRRLMSCMEVRKEPGYSSIDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYV 521
            K+R  M    V+K PGYS I+   ++  F  G+  HP K+EIF  L++LD  M++ GYV
Sbjct: 643 GKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYV 702

Query: 522 PNTSFVLHDMEQQEKEKQLFWHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFT 581
             TS VLHD+E++EKE+ + +HSERLA+AYG+++   G  IR++KNLR+C DCHN +K+ 
Sbjct: 703 SKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYM 762

Query: 582 SDIVKREIVVRDATRYHHFKDGKCSCNDFW 611
           + I  R I++RD  R+HHFKDG CSC D+W
Sbjct: 763 ARITGRLIILRDNNRFHHFKDGSCSCGDYW 781

[Close]
BLAST of CmaCh01G003170 vs. ExPASy Swiss-Prot
Match: Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 1.8e-129
Identity = 238/621 (38.33%), Postives = 367/621 (59.10%), Query Frame = 0 

Query: 24  KLHSQIIKAGLDKAGPLPNTLLDVYGKC-------------------------------G 83
           K+HS I+K GL     + N+LL++Y KC                               G
Sbjct: 167 KVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVG 226

Query: 84  LIPQALQLFDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIV 143
            +  A+  F++M  RD V+W S+++  N+     R L + S M     L PD F  A ++
Sbjct: 227 QMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVL 286

Query: 144 SACASLGYLRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKN-- 203
           SACA+L  L +GKQ+H+  + + F    +V ++LI MY++CG  + AR + +    K+  
Sbjct: 287 SACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLK 346

Query: 204 SVSWTAMISGYAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRR 263
              +TA++ GY K G  + A  +F  +  R++ +WTA+I G  Q G+   + +LF  M  
Sbjct: 347 IEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVG 406

Query: 264 EGIDVVDPLVFSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDIL 323
            G    +    ++++   ++LA L  GKQIHG  +  G    + +SNAL+ MYAK  +I 
Sbjct: 407 GG-QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 466

Query: 324 AAKDIFYKMP-RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYAC 383
           +A   F  +   +D +SWTS+I+  AQHG AEEAL L++ M++ G++P+ +T+VG+  AC
Sbjct: 467 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 526

Query: 384 SHVGLVTKGRELFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPT 443
           +H GLV +GR+ F  M    KI P+L HY C++DL  R+G L+EA+  + KMP +PD  T
Sbjct: 527 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 586

Query: 444 WASLLSACKRHNNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSC 503
           W SLLSAC+ H N+++G   A+ +L L+PE+   Y  L+N+Y+    W+  +K+R+ M  
Sbjct: 587 WGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKD 646

Query: 504 MEVRKEPGYSSIDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHD 563
             V+KE G+S I+   +  VF   +  HP K EI+  +K +   +++ GYVP+T+ VLHD
Sbjct: 647 GRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHD 706

Query: 564 MEQQEKEKQLFWHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIV 611
           +E++ KE+ L  HSE+LA+A+GL+     T +RI+KNLR+C DCH  +KF S +V REI+
Sbjct: 707 LEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREII 766

[Close]
BLAST of CmaCh01G003170 vs. ExPASy TrEMBL
Match: A0A6J1KBS5 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111492878 PE=3 SV=1)

HSP 1 Score: 1247.3 bits (3226), Expect = 0.0e+00
Identity = 610/610 (100.00%), Postives = 610/610 (100.00%), Query Frame = 0 

Query: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL 60
           MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL
Sbjct: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120
           FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG 180
           LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG 180

Query: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240
           YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV
Sbjct: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240

Query: 241 FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP 300
           FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP
Sbjct: 241 FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360
           RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360

Query: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420
           LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420

Query: 421 NNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYSS 480
           NNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYSS
Sbjct: 421 NNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYSS 480

Query: 481 IDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           IDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHDMEQQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHDMEQQEKEKQLF 540

Query: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600
           WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600

Query: 601 DGKCSCNDFW 611
           DGKCSCNDFW
Sbjct: 601 DGKCSCNDFW 610

[Close]
BLAST of CmaCh01G003170 vs. ExPASy TrEMBL
Match: A0A6J1G9N5 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111452061 PE=3 SV=1)

HSP 1 Score: 1231.1 bits (3184), Expect = 0.0e+00
Identity = 601/610 (98.52%), Postives = 606/610 (99.34%), Query Frame = 0 

Query: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL 60
           MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPL NTLLDVYGKCGLIPQALQL
Sbjct: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLANTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120
           FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG 180
           LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSI FKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSILFKNSVSWTAMISG 180

Query: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240
           YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV
Sbjct: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240

Query: 241 FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP 300
           FSSVVGACANLALLELGKQ+HGLVIA+GFESCLFISN LVDMYAKCSDILAAKDIFYKMP
Sbjct: 241 FSSVVGACANLALLELGKQMHGLVIAIGFESCLFISNTLVDMYAKCSDILAAKDIFYKMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360
           RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360

Query: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420
           LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420

Query: 421 NNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYSS 480
           NNMEMGVRIADHVLDLKP+DPSTYILLSNVYAGAEMW+SVSKVRRLMSCMEVRKEPGYSS
Sbjct: 421 NNMEMGVRIADHVLDLKPKDPSTYILLSNVYAGAEMWESVSKVRRLMSCMEVRKEPGYSS 480

Query: 481 IDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           IDFGKESQVFHAGETNHPMK+EIFHLLKDLDA MRRRGYVPNTSFVLHDMEQQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETNHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540

Query: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600
           WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600

Query: 601 DGKCSCNDFW 611
           DGKCSCNDFW
Sbjct: 601 DGKCSCNDFW 610

[Close]
BLAST of CmaCh01G003170 vs. ExPASy TrEMBL
Match: A0A6J1CPR6 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111013178 PE=3 SV=1)

HSP 1 Score: 1135.9 bits (2937), Expect = 0.0e+00
Identity = 552/610 (90.49%), Postives = 580/610 (95.08%), Query Frame = 0 

Query: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL 60
           MN+ HFLHELQLCARRQS +AAGKLHSQIIK GL + GPLPNTLLDVYGKCGLIPQALQL
Sbjct: 1   MNVSHFLHELQLCARRQSASAAGKLHSQIIKTGLVQYGPLPNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120
           FDEMPHRDHVSWASILTAHN+AILPRRTLSML+ M   DGLQPDHF+FA IV ACASLG 
Sbjct: 61  FDEMPHRDHVSWASILTAHNQAILPRRTLSMLNTMLALDGLQPDHFIFASIVRACASLGI 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG 180
           LRLGKQVHARFMLSSF DDEVVKSSLIDMYAKC  PDDARAVFDSI FKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFYDDEVVKSSLIDMYAKCRQPDDARAVFDSILFKNSVSWTAMISG 180

Query: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240
           YA+SGRKSDAIELF RVPVRNLFSWTALISGLIQSGNG+YSFSLF+EMRREGID+VDPLV
Sbjct: 181 YARSGRKSDAIELFHRVPVRNLFSWTALISGLIQSGNGMYSFSLFSEMRREGIDIVDPLV 240

Query: 241 FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP 300
            SSVVGACANLALLELGKQIH LVIALGFESCLFISNALVDMYAKCSDILAAKDIF  MP
Sbjct: 241 LSSVVGACANLALLELGKQIHCLVIALGFESCLFISNALVDMYAKCSDILAAKDIFLGMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360
           RKDVISWTSIIVGTAQHG+AEEAL+LYDEMVL+G+KPNEVTFVGLLYACSH GLV +GRE
Sbjct: 301 RKDVISWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLLYACSHAGLVNRGRE 360

Query: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420
           LFRSM ADY+INPSLQHYTCLLDLLSRSGHL+EAE+++N+MPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMVADYRINPSLQHYTCLLDLLSRSGHLDEAESIINEMPFKPDEPTWASLLSACKRH 420

Query: 421 NNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYSS 480
           N M+MGVRIADHVLDLKPEDPSTYILLSNVYA AEMW+SVSKVR+LMS MEVRKEPGYSS
Sbjct: 421 NXMKMGVRIADHVLDLKPEDPSTYILLSNVYASAEMWESVSKVRKLMSSMEVRKEPGYSS 480

Query: 481 IDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           IDFGKESQVFHAGET HPM++EIFHLLKDLDA MRRRGYVPNTSFVLHDMEQQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETCHPMRDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540

Query: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600
           WHSERLAMAYGLLKAVPGT+IRIVKNLRICGDCHNVLKF SDIVKREIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFASDIVKREIVVRDATRYHHFK 600

Query: 601 DGKCSCNDFW 611
           +GKCSCNDFW
Sbjct: 601 EGKCSCNDFW 610

[Close]
BLAST of CmaCh01G003170 vs. ExPASy TrEMBL
Match: A0A1S3BZM7 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494781 PE=3 SV=1)

HSP 1 Score: 1130.9 bits (2924), Expect = 0.0e+00
Identity = 545/611 (89.20%), Postives = 586/611 (95.91%), Query Frame = 0 

Query: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL 60
           MNI HFLH+LQLCARRQS +AAGKLHSQIIKAG DK+  L NTLLDVYGKCGLIPQALQL
Sbjct: 1   MNISHFLHQLQLCARRQSASAAGKLHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120
           FDEMPHRDHVSWASILTAHN+A++PRRTLSML+IMFT+DGLQPDHFVFACIV AC+SLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNKALIPRRTLSMLNIMFTNDGLQPDHFVFACIVRACSSLGY 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG 180
           LRLGKQVHARFMLS FCDDEVVKSSLIDMY KCG PDDARAVFDSI FKNSVSWT+MISG
Sbjct: 121 LRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISG 180

Query: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240
           YA+SGRK +A++LF +VPVRNLFSWTALISGLIQSG+GI+SFSLFNEMRREGID+VDPLV
Sbjct: 181 YARSGRKCEAMDLFLQVPVRNLFSWTALISGLIQSGHGIFSFSLFNEMRREGIDIVDPLV 240

Query: 241 FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP 300
            SSVVG CANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFY+MP
Sbjct: 241 LSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360
           RKDVISWTSIIVGTAQHGKAEEAL+LYDEMVLS IKPNEVTFVGLLYACSH GLV++GRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRE 360

Query: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420
           LFRSMT DY INPSLQHYTCLLDLLSRSGHL+EAENLLN++PFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLNEIPFKPDEPTWASLLSACKRH 420

Query: 421 NNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYSS 480
           NN+EMGVRIAD +LDLKPEDPSTYILLSNVYAGAEMW+SVSKVR+LM+ MEVRK+PGYSS
Sbjct: 421 NNLEMGVRIADRLLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMNSMEVRKKPGYSS 480

Query: 481 IDFGKESQVFHAGET-NHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHDMEQQEKEKQL 540
           IDFGK+SQVFHAGE+ +HPMK EIF+LLKDLDA MR+RGYVPNTSFVL+D+EQQEKEKQL
Sbjct: 481 IDFGKDSQVFHAGESCDHPMKNEIFNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQL 540

Query: 541 FWHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHF 600
           FWHSERLA+AYGLLKAVPGT+IRIVKNLRICGDCHNVLKF SDIVKREIVVRDATRYHHF
Sbjct: 541 FWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIVVRDATRYHHF 600

Query: 601 KDGKCSCNDFW 611
           K+GKCSCNDFW
Sbjct: 601 KEGKCSCNDFW 611

[Close]
BLAST of CmaCh01G003170 vs. ExPASy TrEMBL
Match: A0A5D3E178 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00970 PE=3 SV=1)

HSP 1 Score: 1130.5 bits (2923), Expect = 0.0e+00
Identity = 545/611 (89.20%), Postives = 586/611 (95.91%), Query Frame = 0 

Query: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL 60
           MNI HFLH+LQLCARRQS +AAGKLHSQIIKAG DK+  L NTLLDVYGKCGLIPQALQL
Sbjct: 1   MNISHFLHQLQLCARRQSASAAGKLHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120
           FDEMPHRDHVSWASILTAHN+A++PRRTLSML+IMFT+DGLQPDHFVFACIV AC+SLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNKALIPRRTLSMLNIMFTNDGLQPDHFVFACIVRACSSLGY 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG 180
           LRLGKQVHARFMLS FCDDEVVKSSLIDMY KCG PDDARAVFDSI FKNSVSWT+MISG
Sbjct: 121 LRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISG 180

Query: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240
           YA+SGRK +A++LF +VPVRNLFSWTALISGLIQSG+GI+SFSLFNEMRREGID+VDPLV
Sbjct: 181 YARSGRKCEAMDLFLQVPVRNLFSWTALISGLIQSGHGIFSFSLFNEMRREGIDIVDPLV 240

Query: 241 FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP 300
            SSVVG CANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFY+MP
Sbjct: 241 LSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360
           RKDVISWTSIIVGTAQHGKAEEAL+LYDEMVLS IKPNEVTFVGLLYACSH GLV++GRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRE 360

Query: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420
           LFRSMT DY INPSLQHYTCLLDLLSRSGHL+EAENLLN++PFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLNEIPFKPDEPTWASLLSACKRH 420

Query: 421 NNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYSS 480
           NN+EMGVRIAD +LDLKPEDPSTYILLSNVYAGAEMW+SVSKVR+LM+ MEVRK+PGYSS
Sbjct: 421 NNLEMGVRIADRLLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMNSMEVRKKPGYSS 480

Query: 481 IDFGKESQVFHAGET-NHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHDMEQQEKEKQL 540
           IDFGK+SQVFHAGE+ +HPMK EIF+LLKDLDA MR+RGYVPNTSFVL+D+EQQEKEKQL
Sbjct: 481 IDFGKDSQVFHAGESCDHPMKNEIFNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQL 540

Query: 541 FWHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHF 600
           FWHSERLA+AYGLLKAVPGT+IRIVKNLRICGDCHNVLKF SDIVKREIVVRDATRYHHF
Sbjct: 541 FWHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIVVRDATRYHHF 600

Query: 601 KDGKCSCNDFW 611
           K+GKCSCNDFW
Sbjct: 601 KEGKCSCNDFW 611

[Close]
BLAST of CmaCh01G003170 vs. NCBI nr
Match: XP_022998145.1 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1247.3 bits (3226), Expect = 0.0e+00
Identity = 610/610 (100.00%), Postives = 610/610 (100.00%), Query Frame = 0 

Query: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL 60
           MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL
Sbjct: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120
           FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG 180
           LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG 180

Query: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240
           YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV
Sbjct: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240

Query: 241 FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP 300
           FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP
Sbjct: 241 FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360
           RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360

Query: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420
           LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420

Query: 421 NNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYSS 480
           NNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYSS
Sbjct: 421 NNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYSS 480

Query: 481 IDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           IDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHDMEQQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHDMEQQEKEKQLF 540

Query: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600
           WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600

Query: 601 DGKCSCNDFW 611
           DGKCSCNDFW
Sbjct: 601 DGKCSCNDFW 610

[Close]
BLAST of CmaCh01G003170 vs. NCBI nr
Match: XP_022948359.1 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1231.1 bits (3184), Expect = 0.0e+00
Identity = 601/610 (98.52%), Postives = 606/610 (99.34%), Query Frame = 0 

Query: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL 60
           MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPL NTLLDVYGKCGLIPQALQL
Sbjct: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLANTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120
           FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG 180
           LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSI FKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSILFKNSVSWTAMISG 180

Query: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240
           YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV
Sbjct: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240

Query: 241 FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP 300
           FSSVVGACANLALLELGKQ+HGLVIA+GFESCLFISN LVDMYAKCSDILAAKDIFYKMP
Sbjct: 241 FSSVVGACANLALLELGKQMHGLVIAIGFESCLFISNTLVDMYAKCSDILAAKDIFYKMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360
           RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360

Query: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420
           LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420

Query: 421 NNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYSS 480
           NNMEMGVRIADHVLDLKP+DPSTYILLSNVYAGAEMW+SVSKVRRLMSCMEVRKEPGYSS
Sbjct: 421 NNMEMGVRIADHVLDLKPKDPSTYILLSNVYAGAEMWESVSKVRRLMSCMEVRKEPGYSS 480

Query: 481 IDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           IDFGKESQVFHAGETNHPMK+EIFHLLKDLDA MRRRGYVPNTSFVLHDMEQQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETNHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540

Query: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600
           WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600

Query: 601 DGKCSCNDFW 611
           DGKCSCNDFW
Sbjct: 601 DGKCSCNDFW 610

[Close]
BLAST of CmaCh01G003170 vs. NCBI nr
Match: XP_023523455.1 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1225.3 bits (3169), Expect = 0.0e+00
Identity = 598/610 (98.03%), Postives = 603/610 (98.85%), Query Frame = 0 

Query: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL 60
           MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAG DKAGPLPNTLLDVYGKCGLIPQALQL
Sbjct: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGFDKAGPLPNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120
           FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFT DGLQPDHFVFACIVSACASLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTRDGLQPDHFVFACIVSACASLGY 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG 180
           LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSI FKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSILFKNSVSWTAMISG 180

Query: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240
           YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV
Sbjct: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240

Query: 241 FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP 300
           FSSVVGACANLALLELGKQ+HGLVIA+GFESCLFISN LVDMYAKCSDILAAKDIFYKMP
Sbjct: 241 FSSVVGACANLALLELGKQMHGLVIAIGFESCLFISNTLVDMYAKCSDILAAKDIFYKMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360
           RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360

Query: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420
           LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420

Query: 421 NNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYSS 480
           NNMEMGVRIADHVLDLKPEDPSTY+LLSNVYAGA MW+SVSKVRRLMSCMEVRKEPGYSS
Sbjct: 421 NNMEMGVRIADHVLDLKPEDPSTYVLLSNVYAGAGMWESVSKVRRLMSCMEVRKEPGYSS 480

Query: 481 IDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           IDFGKESQVFHAGETNHPMK+EIFHLLKDLDA MRRRGYVPNTSFVLHDM QQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETNHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMVQQEKEKQLF 540

Query: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600
           WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600

Query: 601 DGKCSCNDFW 611
           DGKCSCNDFW
Sbjct: 601 DGKCSCNDFW 610

[Close]
BLAST of CmaCh01G003170 vs. NCBI nr
Match: KAG6606966.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1222.2 bits (3161), Expect = 0.0e+00
Identity = 597/610 (97.87%), Postives = 602/610 (98.69%), Query Frame = 0 

Query: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL 60
           MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGL KA PL NTLLDVYGKCGLIPQALQL
Sbjct: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLGKASPLTNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120
           FDEMPHRDHVSWASILTAHNRAILPRRTLSML IM THDGLQPDHFVFACIVSACASLGY
Sbjct: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLGIMLTHDGLQPDHFVFACIVSACASLGY 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG 180
           LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSI FKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSILFKNSVSWTAMISG 180

Query: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240
           YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV
Sbjct: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240

Query: 241 FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP 300
           FSSVVGACANLALLELGKQ+HGLVIA+GFESCLFISN LVDMYAKCSDILAAKDIFYKMP
Sbjct: 241 FSSVVGACANLALLELGKQMHGLVIAIGFESCLFISNTLVDMYAKCSDILAAKDIFYKMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360
           RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360

Query: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420
           LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420

Query: 421 NNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYSS 480
           NNMEMGVRIADHVLDLKP+DPSTYILLSNVYAGAEMW+SVSKVRRLMSCMEVRKEPGYSS
Sbjct: 421 NNMEMGVRIADHVLDLKPKDPSTYILLSNVYAGAEMWESVSKVRRLMSCMEVRKEPGYSS 480

Query: 481 IDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           IDFGKESQVFHAGETNHPMK+EIFHLLKDLDA MRRRGYVPNTSFVLHDMEQQEKEKQLF
Sbjct: 481 IDFGKESQVFHAGETNHPMKDEIFHLLKDLDAEMRRRGYVPNTSFVLHDMEQQEKEKQLF 540

Query: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600
           WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK
Sbjct: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600

Query: 601 DGKCSCNDFW 611
           DGKCSCNDFW
Sbjct: 601 DGKCSCNDFW 610

[Close]
BLAST of CmaCh01G003170 vs. NCBI nr
Match: XP_038903469.1 (pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Benincasa hispida])

HSP 1 Score: 1151.3 bits (2977), Expect = 0.0e+00
Identity = 556/610 (91.15%), Postives = 587/610 (96.23%), Query Frame = 0 

Query: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL 60
           MNI HFLHELQLC RRQS +AAGKLHSQIIKAG +K+GPLPNTLLDVYGKCGLIPQALQL
Sbjct: 1   MNISHFLHELQLCTRRQSASAAGKLHSQIIKAGFEKSGPLPNTLLDVYGKCGLIPQALQL 60

Query: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120
           FDEMP RDHVSWASILTAHN+AILPRRTLSML+ MFT DGLQPDHFVFACIV ACASLGY
Sbjct: 61  FDEMPQRDHVSWASILTAHNQAILPRRTLSMLNTMFTLDGLQPDHFVFACIVRACASLGY 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG 180
           LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKC  PDDARAVFDSI FKNSVSWTAMISG
Sbjct: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCAQPDDARAVFDSILFKNSVSWTAMISG 180

Query: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240
           YA+SGRK +AIELFQRVP+RNLFSWTALISGLIQSGNGIYSFSLFNEMRREGID+VDPLV
Sbjct: 181 YARSGRKCEAIELFQRVPMRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDIVDPLV 240

Query: 241 FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP 300
            SSVVGACANLALLELGKQIHGLVIALGFESCL+ISNA VDMYAKCSD+LAAKDIFY+MP
Sbjct: 241 LSSVVGACANLALLELGKQIHGLVIALGFESCLYISNAFVDMYAKCSDLLAAKDIFYRMP 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360
           RKDVISWTSIIVGTAQHGKAEEAL+LYDEMVLS +KPNEVTF+GLLYACSHVGLV++GRE
Sbjct: 301 RKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRVKPNEVTFIGLLYACSHVGLVSRGRE 360

Query: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420
           LFRSMT DY+INPSLQHYTCLLDLLSRSGHL+EAENLLN+MPFKPDEPTWASLLSACKRH
Sbjct: 361 LFRSMTIDYRINPSLQHYTCLLDLLSRSGHLDEAENLLNEMPFKPDEPTWASLLSACKRH 420

Query: 421 NNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYSS 480
           NN++MGVRIADHVLDLKPEDPSTYILLSNVYAGAEMW+SVSKVR+LMS MEVRKEPGYSS
Sbjct: 421 NNLKMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWESVSKVRKLMSSMEVRKEPGYSS 480

Query: 481 IDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHDMEQQEKEKQLF 540
           IDFGKESQVFHAGE+ H MK+EIF+LLKDLDA MRRRGYVPNTSFVLHDME QEKEKQLF
Sbjct: 481 IDFGKESQVFHAGESCHLMKDEIFNLLKDLDAEMRRRGYVPNTSFVLHDMEPQEKEKQLF 540

Query: 541 WHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHHFK 600
           WHSERLA+AYGLLKAVPGT+IRIVKNLRICGDCHNVLKF SDI +REIVVRDATRYHHFK
Sbjct: 541 WHSERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIKQREIVVRDATRYHHFK 600

Query: 601 DGKCSCNDFW 611
           +GKCSCNDFW
Sbjct: 601 EGKCSCNDFW 610

[Close]
BLAST of CmaCh01G003170 vs. TAIR 10
Match: AT4G14050.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 876.7 bits (2264), Expect = 1.1e-254
Identity = 411/612 (67.16%), Postives = 511/612 (83.50%), Query Frame = 0 

Query: 1   MNIFHFLHELQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKCGLIPQALQL 60
           M I H+LH+LQLCAR ++   A  LH+ I+K G+ +  PL NTL++VYGKCG    ALQ+
Sbjct: 1   MLIPHYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQV 60

Query: 61  FDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIVSACASLGY 120
           FDEMPHRDH++WAS+LTA N+A L  +TLS+ S + +  GL+PD FVF+ +V ACA+LG 
Sbjct: 61  FDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGS 120

Query: 121 LRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKNSVSWTAMISG 180
           +  G+QVH  F++S + +DEVVKSSL+DMYAKCG+ + A+AVFDSI  KN++SWTAM+SG
Sbjct: 121 IDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSG 180

Query: 181 YAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRREGIDVVDPLV 240
           YAKSGRK +A+ELF+ +PV+NL+SWTALISG +QSG G+ +FS+F EMRRE +D++DPLV
Sbjct: 181 YAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLV 240

Query: 241 FSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYKMP 300
            SS+VGACANLA    G+Q+HGLVIALGF+SC+FISNAL+DMYAKCSD++AAKDIF +M 
Sbjct: 241 LSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMR 300

Query: 301 RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYACSHVGLVTKGRE 360
            +DV+SWTS+IVG AQHG+AE+AL+LYD+MV  G+KPNEVTFVGL+YACSHVG V KGRE
Sbjct: 301 HRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRE 360

Query: 361 LFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPTWASLLSACKRH 420
           LF+SMT DY I PSLQHYTCLLDLL RSG L+EAENL++ MPF PDEPTWA+LLSACKR 
Sbjct: 361 LFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQ 420

Query: 421 NNMEMGVRIADH-VLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSCMEVRKEPGYS 480
              +MG+RIADH V   K +DPSTYILLSN+YA A +W  VS+ RR +  MEVRK+PG+S
Sbjct: 421 GRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHS 480

Query: 481 SIDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMR-RRGYVPNTSFVLHDMEQQEKEKQ 540
           S++  KE++VF+AGET+HP+KE+IF LLK L+  MR R GYVP+TS++LHDM++QEKEK 
Sbjct: 481 SVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKL 540

Query: 541 LFWHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIVVRDATRYHH 600
           LFWHSER A+AYGLLKAVPGT IRIVKNLR+CGDCH VLK  S+I +REI+VRDATRYHH
Sbjct: 541 LFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHH 600

Query: 601 FKDGKCSCNDFW 611
           FK GKCSCNDFW
Sbjct: 601 FKGGKCSCNDFW 612

[Close]
BLAST of CmaCh01G003170 vs. TAIR 10
Match: AT1G25360.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 489.6 bits (1259), Expect = 3.7e-138
Identity = 250/624 (40.06%), Postives = 369/624 (59.13%), Query Frame = 0 

Query: 24  KLHSQIIKAGLDKAGPLPNTLLDVYGKC----GLIPQALQLFDEMPHRDHVSWASILT-- 83
           + H+  +K+G      + N L+ VY KC     L+  A ++FDE+  +D  SW +++T  
Sbjct: 170 QFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGY 229

Query: 84  -----------------------AHNRAI-------LPRRTLSMLSIMFTHDGLQPDHFV 143
                                  A+N  I         +  L M+  M +  G++ D F 
Sbjct: 230 VKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS-SGIELDEFT 289

Query: 144 FACIVSACASLGYLRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSIS 203
           +  ++ ACA+ G L+LGKQVHA ++L          +SL+ +Y KCG  D+ARA+F+ + 
Sbjct: 290 YPSVIRACATAGLLQLGKQVHA-YVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP 349

Query: 204 FKNSVSWTAMISGYAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNE 263
            K+ VSW A++SGY  SG   +A  +F+ +  +N+ SW  +ISGL ++G G     LF+ 
Sbjct: 350 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 409

Query: 264 MRREGIDVVDPLVFSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCS 323
           M+REG +  D   FS  + +CA L     G+Q H  ++ +GF+S L   NAL+ MYAKC 
Sbjct: 410 MKREGFEPCD-YAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCG 469

Query: 324 DILAAKDIFYKMPRKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLY 383
            +  A+ +F  MP  D +SW ++I    QHG   EA+ +Y+EM+  GI+P+ +T + +L 
Sbjct: 470 VVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLT 529

Query: 384 ACSHVGLVTKGRELFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDE 443
           ACSH GLV +GR+ F SM   Y+I P   HY  L+DLL RSG   +AE+++  +PFKP  
Sbjct: 530 ACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTA 589

Query: 444 PTWASLLSACKRHNNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLM 503
             W +LLS C+ H NME+G+  AD +  L PE   TY+LLSN++A    W+ V++VR+LM
Sbjct: 590 EIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLM 649

Query: 504 SCMEVRKEPGYSSIDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVL 563
               V+KE   S I+   +   F   +T+HP  E ++  L+DL   MRR GYVP+TSFVL
Sbjct: 650 RDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVL 709

Query: 564 HDMEQQ-EKEKQLFWHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKR 611
           HD+E    KE  L  HSE++A+A+GL+K  PGT IRI KNLR CGDCHN  +F S +V+R
Sbjct: 710 HDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQR 769

[Close]
BLAST of CmaCh01G003170 vs. TAIR 10
Match: AT4G37170.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 473.8 bits (1218), Expect = 2.1e-133
Identity = 239/632 (37.82%), Postives = 368/632 (58.23%), Query Frame = 0 

Query: 10  LQLCARRQSTAAAGKLHSQIIKAGLDKAGPLPNTLLDVYGKC------------------ 69
           +Q+C++ ++     K+H  I  +G      + N LL +Y KC                  
Sbjct: 92  IQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDL 151

Query: 70  -------------GLIPQALQLFDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTH 129
                        GL+ +A +LFDEM  +D  SW +++T + +   P   L + S+M   
Sbjct: 152 CSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRV 211

Query: 130 DGLQPDHFVFACIVSACASLGYLRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDD 189
              +P+ F  +  V+A A++  +R GK++H   + +    DEV+ SSL+DMY KCG  D+
Sbjct: 212 PNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDE 271

Query: 190 ARAVFDSISFKNSVSWTAMISGYAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNG 249
           AR +FD I  K+ VSWT+MI  Y KS R                  W             
Sbjct: 272 ARNIFDKIVEKDVVSWTSMIDRYFKSSR------------------WRE----------- 331

Query: 250 IYSFSLFNEMRREGIDVVDPLVFSSVVGACANLALLELGKQIHGLVIALGFESCLFISNA 309
              FSLF+E+     +  +   F+ V+ ACA+L   ELGKQ+HG +  +GF+   F S++
Sbjct: 332 --GFSLFSEL-VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSS 391

Query: 310 LVDMYAKCSDILAAKDIFYKMPRKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPN 369
           LVDMY KC +I +AK +    P+ D++SWTS+I G AQ+G+ +EAL  +D ++ SG KP+
Sbjct: 392 LVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 451

Query: 370 EVTFVGLLYACSHVGLVTKGRELFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLL 429
            VTFV +L AC+H GLV KG E F S+T  ++++ +  HYTCL+DLL+RSG  E+ ++++
Sbjct: 452 HVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVI 511

Query: 430 NKMPFKPDEPTWASLLSACKRHNNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWD 489
           ++MP KP +  WAS+L  C  + N+++    A  +  ++PE+P TY+ ++N+YA A  W+
Sbjct: 512 SEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWE 571

Query: 490 SVSKVRRLMSCMEVRKEPGYSSIDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRG 549
              K+R+ M  + V K PG S  +  ++  VF A +T+HPM  +I   L++L   M+  G
Sbjct: 572 EEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEG 631

Query: 550 YVPNTSFVLHDMEQQEKEKQLFWHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLK 609
           YVP TS VLHD+E ++KE+ L +HSE+LA+A+ +L    GT I++ KNLR C DCH  +K
Sbjct: 632 YVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIK 691

Query: 610 FTSDIVKREIVVRDATRYHHFKDGKCSCNDFW 611
           F S+I KR+I VRD+TR+H F++G+CSC D+W
Sbjct: 692 FISNITKRKITVRDSTRFHCFENGQCSCGDYW 691

[Close]
BLAST of CmaCh01G003170 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 473.0 bits (1216), Expect = 3.6e-133
Identity = 236/570 (41.40%), Postives = 353/570 (61.93%), Query Frame = 0 

Query: 42  NTLLDVYGKCGLIPQALQLFDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGL 101
           N LL  + K   I +A Q FD M  RD VSW +I+T + ++      +     +F    +
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQS----GKIDEARQLFDESPV 282

Query: 102 QPDHFVFACIVSACASLGYLRLGKQVHARFMLSSFCD-DEVVKSSLIDMYAKCGMPDDAR 161
           Q D F +  +VS     GY++      AR +     + +EV  ++++  Y +    + A+
Sbjct: 283 Q-DVFTWTAMVS-----GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAK 342

Query: 162 AVFDSISFKNSVSWTAMISGYAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIY 221
            +FD +  +N  +W  MI+GYA+ G+ S+A  LF ++P R+  SW A+I+G  QSG+   
Sbjct: 343 ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE 402

Query: 222 SFSLFNEMRREGIDVVDPLVFSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALV 281
           +  LF +M REG   ++   FSS +  CA++  LELGKQ+HG ++  G+E+  F+ NAL+
Sbjct: 403 ALRLFVQMEREG-GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALL 462

Query: 282 DMYAKCSDILAAKDIFYKMPRKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEV 341
            MY KC  I  A D+F +M  KD++SW ++I G ++HG  E AL  ++ M   G+KP++ 
Sbjct: 463 LMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA 522

Query: 342 TFVGLLYACSHVGLVTKGRELFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNK 401
           T V +L ACSH GLV KGR+ F +MT DY + P+ QHY C++DLL R+G LE+A NL+  
Sbjct: 523 TMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKN 582

Query: 402 MPFKPDEPTWASLLSACKRHNNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSV 461
           MPF+PD   W +LL A + H N E+    AD +  ++PE+   Y+LLSN+YA +  W  V
Sbjct: 583 MPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDV 642

Query: 462 SKVRRLMSCMEVRKEPGYSSIDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYV 521
            K+R  M    V+K PGYS I+   ++  F  G+  HP K+EIF  L++LD  M++ GYV
Sbjct: 643 GKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYV 702

Query: 522 PNTSFVLHDMEQQEKEKQLFWHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFT 581
             TS VLHD+E++EKE+ + +HSERLA+AYG+++   G  IR++KNLR+C DCHN +K+ 
Sbjct: 703 SKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYM 762

Query: 582 SDIVKREIVVRDATRYHHFKDGKCSCNDFW 611
           + I  R I++RD  R+HHFKDG CSC D+W
Sbjct: 763 ARITGRLIILRDNNRFHHFKDGSCSCGDYW 781

[Close]
BLAST of CmaCh01G003170 vs. TAIR 10
Match: AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 464.5 bits (1194), Expect = 1.3e-130
Identity = 238/621 (38.33%), Postives = 367/621 (59.10%), Query Frame = 0 

Query: 24  KLHSQIIKAGLDKAGPLPNTLLDVYGKC-------------------------------G 83
           K+HS I+K GL     + N+LL++Y KC                               G
Sbjct: 167 KVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVG 226

Query: 84  LIPQALQLFDEMPHRDHVSWASILTAHNRAILPRRTLSMLSIMFTHDGLQPDHFVFACIV 143
            +  A+  F++M  RD V+W S+++  N+     R L + S M     L PD F  A ++
Sbjct: 227 QMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVL 286

Query: 144 SACASLGYLRLGKQVHARFMLSSFCDDEVVKSSLIDMYAKCGMPDDARAVFDSISFKN-- 203
           SACA+L  L +GKQ+H+  + + F    +V ++LI MY++CG  + AR + +    K+  
Sbjct: 287 SACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLK 346

Query: 204 SVSWTAMISGYAKSGRKSDAIELFQRVPVRNLFSWTALISGLIQSGNGIYSFSLFNEMRR 263
              +TA++ GY K G  + A  +F  +  R++ +WTA+I G  Q G+   + +LF  M  
Sbjct: 347 IEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVG 406

Query: 264 EGIDVVDPLVFSSVVGACANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDIL 323
            G    +    ++++   ++LA L  GKQIHG  +  G    + +SNAL+ MYAK  +I 
Sbjct: 407 GG-QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 466

Query: 324 AAKDIFYKMP-RKDVISWTSIIVGTAQHGKAEEALSLYDEMVLSGIKPNEVTFVGLLYAC 383
           +A   F  +   +D +SWTS+I+  AQHG AEEAL L++ M++ G++P+ +T+VG+  AC
Sbjct: 467 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 526

Query: 384 SHVGLVTKGRELFRSMTADYKINPSLQHYTCLLDLLSRSGHLEEAENLLNKMPFKPDEPT 443
           +H GLV +GR+ F  M    KI P+L HY C++DL  R+G L+EA+  + KMP +PD  T
Sbjct: 527 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 586

Query: 444 WASLLSACKRHNNMEMGVRIADHVLDLKPEDPSTYILLSNVYAGAEMWDSVSKVRRLMSC 503
           W SLLSAC+ H N+++G   A+ +L L+PE+   Y  L+N+Y+    W+  +K+R+ M  
Sbjct: 587 WGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKD 646

Query: 504 MEVRKEPGYSSIDFGKESQVFHAGETNHPMKEEIFHLLKDLDAGMRRRGYVPNTSFVLHD 563
             V+KE G+S I+   +  VF   +  HP K EI+  +K +   +++ GYVP+T+ VLHD
Sbjct: 647 GRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHD 706

Query: 564 MEQQEKEKQLFWHSERLAMAYGLLKAVPGTVIRIVKNLRICGDCHNVLKFTSDIVKREIV 611
           +E++ KE+ L  HSE+LA+A+GL+     T +RI+KNLR+C DCH  +KF S +V REI+
Sbjct: 707 LEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREII 766

The following BLAST results are available for this feature:
BLAST of CmaCh01G003170 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O232661.5e-25367.16Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidop... [more]
Q9FRI55.2e-13740.06Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana OX... [more]
O231693.0e-13237.82Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX... [more]
Q9SY025.1e-13241.40Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... [more]
Q9SHZ81.8e-12938.33Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... [more]
BLAST of CmaCh01G003170 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KBS50.0e+00100.00pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Cucurbit... [more]
A0A6J1G9N50.0e+0098.52pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Cucurbit... [more]
A0A6J1CPR60.0e+0090.49pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Momordic... [more]
A0A1S3BZM70.0e+0089.20LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g14050, mito... [more]
A0A5D3E1780.0e+0089.20Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
BLAST of CmaCh01G003170 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022998145.10.0e+00100.00pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Cucurbita ... [more]
XP_022948359.10.0e+0098.52pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Cucurbita ... [more]
XP_023523455.10.0e+0098.03pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Cucurbita ... [more]
KAG6606966.10.0e+0097.87Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_038903469.10.0e+0091.15pentatricopeptide repeat-containing protein At4g14050, mitochondrial [Benincasa ... [more]
BLAST of CmaCh01G003170 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G14050.11.1e-25467.16Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G25360.13.7e-13840.06Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G37170.12.1e-13337.82Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G02750.13.6e-13341.40Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G22070.11.3e-13038.33pentatricopeptide (PPR) repeat-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 357..539
e-value: 3.0E-18
score: 68.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..119
e-value: 2.0E-13
score: 52.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 255..356
e-value: 4.0E-22
score: 80.4
coord: 122..254
e-value: 7.9E-23
score: 82.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 270..444
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 378..401
e-value: 7.5E-4
score: 19.6
coord: 42..67
e-value: 2.2E-4
score: 21.3
coord: 203..233
e-value: 5.5E-6
score: 26.3
coord: 144..165
e-value: 0.0038
score: 17.4
coord: 172..197
e-value: 3.8E-6
score: 26.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 378..402
e-value: 0.0024
score: 15.9
coord: 305..339
e-value: 5.9E-7
score: 27.3
coord: 203..233
e-value: 5.7E-4
score: 17.9
coord: 172..196
e-value: 2.2E-4
score: 19.2
coord: 42..70
e-value: 7.0E-4
score: 17.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 302..349
e-value: 5.2E-11
score: 42.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 374..408
score: 9.119859
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 170..204
score: 10.47906
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 303..337
score: 12.123256
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 477..600
e-value: 1.7E-35
score: 121.6
NoneNo IPR availablePANTHERPTHR47928:SF153OS11G0661000 PROTEINcoord: 5..598
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 5..598

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh01G003170.1CmaCh01G003170.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016554 cytidine to uridine editing
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding