CmaCh01G003130 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G003130
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	DExH-box ATP-dependent RNA helicase DExH8
Location	Cma_Chr01: 1503030 .. 1510604 (-)
RNA-Seq Expression	CmaCh01G003130
Synteny	CmaCh01G003130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCACAACGACTACGGAGACCAGAGGAACCATTCTGAGAGAGAAGAAAGACGAAAAGGTTCGCTTCAATGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCGACGTCGTTATCATCGTCGCCGTTCGATTTCTCTGCTTTACCGGTCATGTCGCTCAAGGAGAGAATCGTTGAGAAAATCCGCAAGAATCGCATCACGCTTATCGTCGGCGAAACTGGCTGTGGTATGCTATCTTCGTACTGTGTATTACTAGTGGTTTATCGTCTTTTGGTTGAAGGAAGCATGAACTTACAGTTCTCGTTATGATCGTTGTTTCTGATGGATTATACACACATATATTCTTTTTTTCATTTGTGTGTACTGCAACTTAGCCATATTGTACTCGATGACTTGAATTTTTTAAGAGAATGGGGAAGAGATGGAAAATAGAGGATGGATGATGGTTGGTTTACGGGAAGGCAACGCTTGCTATTTGCTTGTCTATCGGTTTAAGCTGTATTGTTACTAGTTTTTTTGCTCGATTGTAGTAGTTATGGTCTATCTCTGCTTATTAGGTTCTATTTCCTTGCGTTTACAGGTAAGAGCTCTCAAATTCCTCAGTTTCTTCTGGACGAAGACATGGGGCCTATTCTTTGTACGCAGCCTAGGCGTTTTGCTGTAGTTGCCATTGCGAATATGGTTGCTAGAGCTCGTAACTGTAACGTGGGAGAAGAGGTTGGATATCATATAGGTCACTCGAAGCATTCATCGGAAAGGTACGTAATATAACTGTTGATAATTGAATCTTCAATTTCACATTAATTTGTAAGTCGTTTTTGCTTACTGTATTTTAAATTGTATTCTTGTAAAATTTTACCAATGCTTCACGCTTCACGCATCCAGATCGAAGATTGTTTTCAAAACGGCTGGGGTTTTGTTGGAAGAAATGCGAGACAGGGGGTTAAAGGCACTCGATTACAAGGTGATTGTACTTGATGAAGTGCACGAAAGATCTGTGGAGTCTGATCTTGTTCTTGTGTGCGTGAAGCAGTTTCTGTTGAAGAACCATGATCTCAGGTTAGTTCTTTCCCTTACCAGTCCTTGTTAGAAATTTAACTAATTTTTTTTTCTTGATTTGGCCACAAATAACACTCGGGAGCTAATATTTTAAATTTTTGTAGGGTGGTATTGATGTCAGCAACCGCTGATATTGGAAGGTATAGAGATTATTTCAAGGAACTTGGTAGAGGTGAACGTGTTGAAGTGCTTGCAATCCCTAGCTCAAGCCAGAAAACTTTCTTTGAATGTAAGGTTTCATATCTTGAAGAGGTGAGCCCTTGTTATTTTTTGTGATTGATGTTGTGTACTTTACTGGTTCTGTAAACCACATGATTGTGTATGTTTGCTCCATGTTTGGAAGTTGGTTCAATGTGCTAGCAATTTTCGAATTACTTTGGTGCTGATTGTTTTGATAGTGTTATAACCATGTTCAGAAAGGAGTTTAGAACTATGTCTGCAACTTAAAAATATATGGAAAAATGTTTGTATAGGACAAGCAGTGATCTTAGAACGAAATTGTGCTGATAGAACATAAGTGATAGTCTCTGAGTTATTTTGTTTTAATTATGATTTATTTCTCCATTGACAGGTAAATGAATTACTTGGGATTGAGTCAGATTTACAATCTTCTAATGGTTTCAGCTCTTCCACATCTTCTGTGGAAATTAAGCCTGAAGTGCACAAACTGATTCACAATCTGTTGTTGCATATTCATAAGAATGAGTCTGACATTGAAAAGAGTATCTTGATTTTTCTTCCCACGTATTATTCACTGGAGCAACAGTGGCATCTTCTGAAGTCACTTAGTTCTTTTAAGGTTTATATTTTACATAGCAGTATTGACATTGAGCAAGCCTTGACAGCAATGAGGATTTGGAAATCACATCGTAAGGTACGTCCACCCTTTTTAAACAATAAATGACTAATCCTGAAATAAAGGTGATATAAAAGTTTTTAATTTAGATGTAAAGCAAGTGATATGACATCTAATTTGAATGTGTTTCTGACAATGCTTTGTGTTTCTGACAATGCTTGTAAGTTGATTGCTGTTTTATTCTCTATATTTGATCATTCGAGACTTCCACACTTGGTTTGGAATTTGATGACCCCATGGTTCTTGATAAGCTCGGGCAACCGTCTCAATTTTTTTTACACTGTTATTCAAACATCTTGCATTTAAAATTTTTCCTGCAGGTGATATTAGCAACAAATATTGCTGAGTCATCCGTCACAATACCAAAAGTAGCATATGTAATCGATACATGCAGGTCTTTACAAGTGTTTTGGGATAATAATCAGAAAAAGGACTCCGCACAGGTTGTCTGGATTTCTAAATCTCAGGTAAATGATCTGGTATACTGTGTCAAATCTTGTTCACCTAAGTTCTACTCTTAACATCTTGGCTTTTTTTTTTTTTTTTTGAACAATAATTTTCTAATGAGATTCTCTATTCATTATTGTACATCTATATAATTCAGAAGATAAAACATATGATTGCACCTGCAGAAACACCGAAGGACCTAACTTTTAGTGCTATACCCCTTTTGTCTCATAGAGTGTGTTTGGTTTGTGGTAAATGGTAATGAAAGGAGAGACAGGCTTCAGAACGCCTTCCTACATTCGGCATAGTACATATCCACCATTGGGCTTTGGCAACAATATAGTTGGATTTTAGATAATGTATAAATATGAATCTATATTACATTTCTACAATTCTCATTCCTCATCATACAAATAAAACACAAGCAACCTATTCTTAACTCTCCAATTTCCAACCTCCGTACTTCCAGCTTTCCATTCTTATTACTTTGTATTAAAGTGGACCTTTAAAGAATTATACTCTCCCCTTTTCTATGTTTTCATTTTTAGATTCTTTCTCCACTCACCACCCTCTCACTATCAAATACATATCTTTCTATCCATTACTTTTACTTCCTTTTTGTGATTATCACCTTTGATAGCCCCCCACCCACCCATTTCAATAGATGAACTTAACAATTTGTAATGTTACAAATGTGAATGAGAAGTCAGATTGAGGACTTCCATATAACTGCAGAATTTCCAAAAAAAGGAGTTTGGTAATTTGACTAATTTCATCTCTTTATACTGCAATATGCCTCAGGCTGAGCAGCGTAGAGGAAGGACTGGTCGAACCTGTGATGGCCAAGTTTATCGATTGGTACCAAGATCATTTTACCACAAATTTGAAGATTTTGAACGACCAGCTATACTGAGGTTATCATTGAGGCAGCAAGTGCTTCTAATTTGCTCAACAGAATCCAAAGCAATTAACGATCCAACTGGTATGATAGTTTTCTCTTGGTGAAAGCTTTTTTTGTTAAATTGAGGAGCGTTCATAATTTTCATTATCTAGTTTAAGGAGGATATACTTTTCCCTTTTTTATGAATGATTTATTTTTAATCACAAAAACATATTGAGGGGCGTTCATAACTTTCATTGCCTAGTTTAAGGAGGATATGATCGACCAAAACATTCAAACACACCCCCCAAAAAAGCCAATATTGCCCCCAATAACTGGCAGCTACAAAGTAGCCTGCATAGACGTAAGTAAAAAGGAAACTCAACTAATGGAGAGCATTACTTTACAACATTAAGTTCAAATTTCAATTTGATGGAATTAGAACTTTAGACAAAGAAAAAAGAAAGTCCCCTCTCCCATCCTCAAATACTTTCCTTCTCATATGAATGAGCTTTAGTATATGATCTTTATTAAATTAGCTTTATTGTAAATAGGATGCTGTCATATCCATGGATGAAATCCATTGCTGTTTTTCTTTTTACAGTAATCATCAAACGCAAATTCAGCAGTCTAATTGATTAATACACTTGTTTAATTTCATTTAGTTATAGTTTTTGATAAACCGATCTGGAATTAATTAAAAATAATAATAATAGTCTACGTATGTCTGTTGAAAGTGTAGGTGTACACTTATTGACTAGGTTGTGGCAATTAGTATGATTGCTGTTGATCCTCTGGTGTTGTTCTTTTTTAACATTTTGTACGTGTATATAATGGGTTGTATATGGTGTTACTATTATCTAAACTGGATGCACATTGATTTATGGAACACCGATTGTAGTTTTGCTGCAGAAAGCTCTCGATCCACCTGATGGCAATGTTGTTGAAGATGCATTGAATCTTCTTGTTCGCATGAAAGCACTTAAAAAAACTCCAAGAGGCCGATATGAACCTACATATTATGGAAGTCTACTAGCCAGTTTCTCACTGTCTTTTGATTCTTCTGTGCTGATACTGAAGTTTGGAGACATTGGAATGCTCCATGAAGGAATTTTGCTTGGCATATTAATGGATACACAGCCTTTACCAGTACTTCGTCCGTTCGGAGAGAATAATTTGGTATTTCTTGATTGTTATTTACTTGGATTCCCCTATTTAACACTTGCCTGCATTTTAATCAACTTTGAAAGCTATCTGATACAGTATGCAGAGTACATAAAAAGCTACTTCGATGGAGAGAGCATTGATACAATTCCACTTGGATTTAAAGAAATGGCATTGATAGGAAACTTGCATGCGTTCCAGTTCTGGGAAAGAGTTTATAAGGTATAGTTCTTGGTTTGAATAGTTATTACTTTGTTTCCAATTATGGGCATAAAATTTAGTCCTCTTTTCCTTAATAGGATAAAATTCGTGTTGAATATTTGAACAAACTCGTGAAGTCTGATAAAATACAAGCTACGACATCAACACCTTCCAAGGATGAAGAAGAATGGTGTTCTTTTCACAGTCTTGTGCATTCATCTCTAAATCACGTCTCTGAAATGTGTATGGACTTTATCATAATCACCGTGCTTCAATTGTTCTTTATTTCATTTTAGCAGATCTTGCTTCCTTTTGCATCTTTATATTCCTTAAGAGTTTATCCTAGACTTTTCTTTGTCTGCCACTCCAGATGAAGATATCATACATACATTGCACCAGTTTCGACCCAGATTTTTGGGTATGTGCGACATTCTAAGATCATCCAACACTCCTCAGTTTCAACATTCATGCATTCTCAAATGTCACGAAAATGGAGTTGACCAATCAAGTGAATCAAGAACCTGTGCATCTCTACCATATGTTGCTTCCAGCTATCCCCGAACTAATCATGTAGCTGGGAAGTTGGCAGATGTTATCAAACAGGTACTCATGTTTTTGTCTTTCCTATGAAAGTTGTTTGTTCACTAACACTTCTTTTTTTTTTTTTTTTTGAACAGATGAAAGTTATTTATGGAAAAGAACCAAACAATCAGTCCTTAAGTTCTTTGAACAACGGTTTTGATGTCCATGATGGGACCGCTCTTTGTGTTTACTTTGTCAATGGATCCTGCAATCGAGGCGATCAGTGCTTGTTTTCACATTCACTGCAATCAAGGAGAGCCACTTGCAAATTTTTCTTCTCTCTCCAGGTATCTATCTATCTGGTGATGCTTGAAAATTGAGCCAATTATATCCATCTTTTTTCTGACTAATGAAATGCTTGAACGATGATTACATTTCCTGAAGACTAAAGTAATTGTTAGCTTTTGGAAATCCAATCAAATAAAATTTAAGGCTTTGCTTGTACGGGTCAATAAAAATGAGAAATAAAAAGAAATTGGGTTAATATATCGATGCTGCTTCTCAGTATATGCTTCACGAAGATTTGTTGGGGGGTTTTCCCCTAATCCCATAAAAAACTAATAGTATGACCTTTTCTATGGCAGGGTTGTCGAAATGGAGTTTCTTGTTTCTTTTCTCACGATCAGAGTCCATCAAATTCTCCTTCATTTAAATCAACTCTATGCCTGCCAGAAGACGAAAAGGCTCATGCTTTGACTCTTGAAAAATATTTTCCTAAATCAGGTGGCAGCATTCTTGTCATGGATGATGCCGGGTTTCATTTCTCATCAAACTTGGCTCGTCACTGCGATCCATCCAAAATAATTTGTACAACCAACCTTTCACGTTCAGACGTCTACGATGCAGCACTAAAGGACGCAAGAAAATTTTGGGAACTTTCCCACCCCGATGAAACCATCATTTCCAGTGGGAAAAATCAAATTCCCTGGTTTGATGTTAAATGTATATTGTGGTTTCCGCGTTTTGCGAGTTTGAAGGAAAATCTGGTCATAGAGAAGCTTCTGCTACATAATTTCTTTGATCTTCTGGCTGTCCGGATGTTGGCCACTGCACTTCACGGGGTTCGAGTCATTCTCACCATGAATAATATCAGATTTTCACAACTTCAGGTAATTGTTCCTTCTTTCTGAATATGAAAATTTTGTTCAGGATTGAAACTAGTGTTAGGAATCACGAATCTCCACCGTATGATATTGTCCACTTTGAGAATAAATTCTCATGACTTTGCTTTTAATTTCCCCAAAAAACCTCGTAATGGAGATATATTTCTTACTTATAAGTAAACCCATGATCAGCCCCCTTAATTAGCCTATGTGTGTCTTATCTCCCAACAATTCTCAACCATCCTCCCTTGAACAAATTACACCTCAGAACCTCCTTGGGCCTCCCCTGAGGCTCATGGAGCCCTCGAACAACGTGAGTCACTTTTTGACTACACCTTCGAGGCTCATAACTTTTTTGTTCGATATTTGAGGATTTTATTGACATGATTTAGTTAAAGGCATGATTCCGATACCATGTTAGGAATCACGAATCTTCATAATGGTATGATATTGTCCCTTTTGAGTATAAGCTCTCGTGACTTTGCTTTTGGTTTTCCCAAAAGGCCTCGTACCAATGGATTCCAAAAGGCCTCAATTAGCCGAGGTGGGATTCCTCTCCCAACAATCCTCAACAACTAAATGATAGAAACATCTTAATGAATGTTCTATCCAGTGAGTTACCAATTGCCATACATTTTGTGGACTCTGAAAGTACTTTTGTTGGCATTGTTTTGTTGTAGGTTGAGAAGTTGGGGAGAGATAGCTTTTTCACTCTAACAGAGTCATTTCCATACGACGAAAAAAGCTTCGGTGAGTTGCCAGACAAAGTAACAACTAAAAAGGCGATGTTGACGTCTCGGTCTATCTCCTATGTTTTCGTCTTGCAACCACCCAGTGCCGTCCAGTTTGGTAATTACCGTATGACACTCCATCGATGCCTACAGGACATCGAGAGAAGTAACAAGGAGATCTCACTGGTTCGTCCTTAGACTCATTGGTTTATATCATGTGTGCATTCATTCTACGTACGTAAAGAAGCCTCCTAACTTATAAAAGACCAGGTGAAGCAAGGACTTAGGACGCTTATGATCACTATGGTAATGTGAATAGTTTTAGTTTTAGGAATTGGGATTGGAGAAAGCATAAAAGATGTTATATTAGTAAAGTGAGTTAACTTATTCGTGGCTTTGAAGTAAGGAAATATGTCCCCTGCAACTCTTCCTTTGTTCAATTGTTTTTTTTTTTCATGTCATTTATTTGTTAGGTTGTCCAAATTAGCCAACGTTTTTTATTTTTCTTTTGGTCTTTTTTTAACCATTTCGTGACGTTTCTAGGTACTGCAC

mRNA sequence

GCACAACGACTACGGAGACCAGAGGAACCATTCTGAGAGAGAAGAAAGACGAAAAGGTTCGCTTCAATGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCGACGTCGTTATCATCGTCGCCGTTCGATTTCTCTGCTTTACCGGTCATGTCGCTCAAGGAGAGAATCGTTGAGAAAATCCGCAAGAATCGCATCACGCTTATCGTCGGCGAAACTGGCTGTGGTAAGAGCTCTCAAATTCCTCAGTTTCTTCTGGACGAAGACATGGGGCCTATTCTTTGTACGCAGCCTAGGCGTTTTGCTGTAGTTGCCATTGCGAATATGGTTGCTAGAGCTCGTAACTGTAACGTGGGAGAAGAGGTTGGATATCATATAGGTCACTCGAAGCATTCATCGGAAAGATCGAAGATTGTTTTCAAAACGGCTGGGGTTTTGTTGGAAGAAATGCGAGACAGGGGGTTAAAGGCACTCGATTACAAGGTGATTGTACTTGATGAAGTGCACGAAAGATCTGTGGAGTCTGATCTTGTTCTTGTGTGCGTGAAGCAGTTTCTGTTGAAGAACCATGATCTCAGGGTGGTATTGATGTCAGCAACCGCTGATATTGGAAGGTATAGAGATTATTTCAAGGAACTTGGTAGAGGTGAACGTGTTGAAGTGCTTGCAATCCCTAGCTCAAGCCAGAAAACTTTCTTTGAATGTAAGGTTTCATATCTTGAAGAGGTAAATGAATTACTTGGGATTGAGTCAGATTTACAATCTTCTAATGGTTTCAGCTCTTCCACATCTTCTGTGGAAATTAAGCCTGAAGTGCACAAACTGATTCACAATCTGTTGTTGCATATTCATAAGAATGAGTCTGACATTGAAAAGAGTATCTTGATTTTTCTTCCCACGTATTATTCACTGGAGCAACAGTGGCATCTTCTGAAGTCACTTAGTTCTTTTAAGGTTTATATTTTACATAGCAGTATTGACATTGAGCAAGCCTTGACAGCAATGAGGATTTGGAAATCACATCGTAAGGTGATATTAGCAACAAATATTGCTGAGTCATCCGTCACAATACCAAAAGTAGCATATGTAATCGATACATGCAGGTCTTTACAAGTGTTTTGGGATAATAATCAGAAAAAGGACTCCGCACAGGTTGTCTGGATTTCTAAATCTCAGGCTGAGCAGCGTAGAGGAAGGACTGGTCGAACCTGTGATGGCCAAGTTTATCGATTGGTACCAAGATCATTTTACCACAAATTTGAAGATTTTGAACGACCAGCTATACTGAGGTTATCATTGAGGCAGCAAGTGCTTCTAATTTGCTCAACAGAATCCAAAGCAATTAACGATCCAACTGTTTTGCTGCAGAAAGCTCTCGATCCACCTGATGGCAATGTTGTTGAAGATGCATTGAATCTTCTTGTTCGCATGAAAGCACTTAAAAAAACTCCAAGAGGCCGATATGAACCTACATATTATGGAAGTCTACTAGCCAGTTTCTCACTGTCTTTTGATTCTTCTGTGCTGATACTGAAGTTTGGAGACATTGGAATGCTCCATGAAGGAATTTTGCTTGGCATATTAATGGATACACAGCCTTTACCAGTACTTCGTCCGTTCGGAGAGAATAATTTGTATGCAGAGTACATAAAAAGCTACTTCGATGGAGAGAGCATTGATACAATTCCACTTGGATTTAAAGAAATGGCATTGATAGGAAACTTGCATGCGTTCCAGTTCTGGGAAAGAGTTTATAAGGATAAAATTCGTGTTGAATATTTGAACAAACTCGTGAAGTCTGATAAAATACAAGCTACGACATCAACACCTTCCAAGGATGAAGAAGAATGGTGTTCTTTTCACAGTCTTGTGCATTCATCTCTAAATCACGTCTCTGAAATGTATGAAGATATCATACATACATTGCACCAGTTTCGACCCAGATTTTTGGGTATGTGCGACATTCTAAGATCATCCAACACTCCTCAGTTTCAACATTCATGCATTCTCAAATGTCACGAAAATGGAGTTGACCAATCAAGTGAATCAAGAACCTGTGCATCTCTACCATATGTTGCTTCCAGCTATCCCCGAACTAATCATGTAGCTGGGAAGTTGGCAGATGTTATCAAACAGATGAAAGTTATTTATGGAAAAGAACCAAACAATCAGTCCTTAAGTTCTTTGAACAACGGTTTTGATGTCCATGATGGGACCGCTCTTTGTGTTTACTTTGTCAATGGATCCTGCAATCGAGGCGATCAGTGCTTGTTTTCACATTCACTGCAATCAAGGAGAGCCACTTGCAAATTTTTCTTCTCTCTCCAGGGTTGTCGAAATGGAGTTTCTTGTTTCTTTTCTCACGATCAGAGTCCATCAAATTCTCCTTCATTTAAATCAACTCTATGCCTGCCAGAAGACGAAAAGGCTCATGCTTTGACTCTTGAAAAATATTTTCCTAAATCAGGTGGCAGCATTCTTGTCATGGATGATGCCGGGTTTCATTTCTCATCAAACTTGGCTCGTCACTGCGATCCATCCAAAATAATTTGTACAACCAACCTTTCACGTTCAGACGTCTACGATGCAGCACTAAAGGACGCAAGAAAATTTTGGGAACTTTCCCACCCCGATGAAACCATCATTTCCAGTGGGAAAAATCAAATTCCCTGGTTTGATGTTAAATGTATATTGTGGTTTCCGCGTTTTGCGAGTTTGAAGGAAAATCTGGTCATAGAGAAGCTTCTGCTACATAATTTCTTTGATCTTCTGGCTGTCCGGATGTTGGCCACTGCACTTCACGGGGTTCGAGTCATTCTCACCATGAATAATATCAGATTTTCACAACTTCAGGTTGAGAAGTTGGGGAGAGATAGCTTTTTCACTCTAACAGAGTCATTTCCATACGACGAAAAAAGCTTCGGTGAGTTGCCAGACAAAGTAACAACTAAAAAGGCGATGTTGACGTCTCGGTCTATCTCCTATGTTTTCGTCTTGCAACCACCCAGTGCCGTCCAGTTTGGTAATTACCGTATGACACTCCATCGATGCCTACAGGACATCGAGAGAAGTAACAAGGAGATCTCACTGGTTCGTCCTTAGACTCATTGGTTTATATCATGTGTGCATTCATTCTACGTACGTAAAGAAGCCTCCTAACTTATAAAAGACCAGGTGAAGCAAGGACTTAGGACGCTTATGATCACTATGGTAATGTGAATAGTTTTAGTTTTAGGAATTGGGATTGGAGAAAGCATAAAAGATGTTATATTAGTAAAGTGAGTTAACTTATTCGTGGCTTTGAAGTAAGGAAATATGTCCCCTGCAACTCTTCCTTTGTTCAATTGTTTTTTTTTTTCATGTCATTTATTTGTTAGGTTGTCCAAATTAGCCAACGTTTTTTATTTTTCTTTTGGTCTTTTTTTAACCATTTCGTGACGTTTCTAGGTACTGCAC

Coding sequence (CDS)

ATGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCGACGTCGTTATCATCGTCGCCGTTCGATTTCTCTGCTTTACCGGTCATGTCGCTCAAGGAGAGAATCGTTGAGAAAATCCGCAAGAATCGCATCACGCTTATCGTCGGCGAAACTGGCTGTGGTAAGAGCTCTCAAATTCCTCAGTTTCTTCTGGACGAAGACATGGGGCCTATTCTTTGTACGCAGCCTAGGCGTTTTGCTGTAGTTGCCATTGCGAATATGGTTGCTAGAGCTCGTAACTGTAACGTGGGAGAAGAGGTTGGATATCATATAGGTCACTCGAAGCATTCATCGGAAAGATCGAAGATTGTTTTCAAAACGGCTGGGGTTTTGTTGGAAGAAATGCGAGACAGGGGGTTAAAGGCACTCGATTACAAGGTGATTGTACTTGATGAAGTGCACGAAAGATCTGTGGAGTCTGATCTTGTTCTTGTGTGCGTGAAGCAGTTTCTGTTGAAGAACCATGATCTCAGGGTGGTATTGATGTCAGCAACCGCTGATATTGGAAGGTATAGAGATTATTTCAAGGAACTTGGTAGAGGTGAACGTGTTGAAGTGCTTGCAATCCCTAGCTCAAGCCAGAAAACTTTCTTTGAATGTAAGGTTTCATATCTTGAAGAGGTAAATGAATTACTTGGGATTGAGTCAGATTTACAATCTTCTAATGGTTTCAGCTCTTCCACATCTTCTGTGGAAATTAAGCCTGAAGTGCACAAACTGATTCACAATCTGTTGTTGCATATTCATAAGAATGAGTCTGACATTGAAAAGAGTATCTTGATTTTTCTTCCCACGTATTATTCACTGGAGCAACAGTGGCATCTTCTGAAGTCACTTAGTTCTTTTAAGGTTTATATTTTACATAGCAGTATTGACATTGAGCAAGCCTTGACAGCAATGAGGATTTGGAAATCACATCGTAAGGTGATATTAGCAACAAATATTGCTGAGTCATCCGTCACAATACCAAAAGTAGCATATGTAATCGATACATGCAGGTCTTTACAAGTGTTTTGGGATAATAATCAGAAAAAGGACTCCGCACAGGTTGTCTGGATTTCTAAATCTCAGGCTGAGCAGCGTAGAGGAAGGACTGGTCGAACCTGTGATGGCCAAGTTTATCGATTGGTACCAAGATCATTTTACCACAAATTTGAAGATTTTGAACGACCAGCTATACTGAGGTTATCATTGAGGCAGCAAGTGCTTCTAATTTGCTCAACAGAATCCAAAGCAATTAACGATCCAACTGTTTTGCTGCAGAAAGCTCTCGATCCACCTGATGGCAATGTTGTTGAAGATGCATTGAATCTTCTTGTTCGCATGAAAGCACTTAAAAAAACTCCAAGAGGCCGATATGAACCTACATATTATGGAAGTCTACTAGCCAGTTTCTCACTGTCTTTTGATTCTTCTGTGCTGATACTGAAGTTTGGAGACATTGGAATGCTCCATGAAGGAATTTTGCTTGGCATATTAATGGATACACAGCCTTTACCAGTACTTCGTCCGTTCGGAGAGAATAATTTGTATGCAGAGTACATAAAAAGCTACTTCGATGGAGAGAGCATTGATACAATTCCACTTGGATTTAAAGAAATGGCATTGATAGGAAACTTGCATGCGTTCCAGTTCTGGGAAAGAGTTTATAAGGATAAAATTCGTGTTGAATATTTGAACAAACTCGTGAAGTCTGATAAAATACAAGCTACGACATCAACACCTTCCAAGGATGAAGAAGAATGGTGTTCTTTTCACAGTCTTGTGCATTCATCTCTAAATCACGTCTCTGAAATGTATGAAGATATCATACATACATTGCACCAGTTTCGACCCAGATTTTTGGGTATGTGCGACATTCTAAGATCATCCAACACTCCTCAGTTTCAACATTCATGCATTCTCAAATGTCACGAAAATGGAGTTGACCAATCAAGTGAATCAAGAACCTGTGCATCTCTACCATATGTTGCTTCCAGCTATCCCCGAACTAATCATGTAGCTGGGAAGTTGGCAGATGTTATCAAACAGATGAAAGTTATTTATGGAAAAGAACCAAACAATCAGTCCTTAAGTTCTTTGAACAACGGTTTTGATGTCCATGATGGGACCGCTCTTTGTGTTTACTTTGTCAATGGATCCTGCAATCGAGGCGATCAGTGCTTGTTTTCACATTCACTGCAATCAAGGAGAGCCACTTGCAAATTTTTCTTCTCTCTCCAGGGTTGTCGAAATGGAGTTTCTTGTTTCTTTTCTCACGATCAGAGTCCATCAAATTCTCCTTCATTTAAATCAACTCTATGCCTGCCAGAAGACGAAAAGGCTCATGCTTTGACTCTTGAAAAATATTTTCCTAAATCAGGTGGCAGCATTCTTGTCATGGATGATGCCGGGTTTCATTTCTCATCAAACTTGGCTCGTCACTGCGATCCATCCAAAATAATTTGTACAACCAACCTTTCACGTTCAGACGTCTACGATGCAGCACTAAAGGACGCAAGAAAATTTTGGGAACTTTCCCACCCCGATGAAACCATCATTTCCAGTGGGAAAAATCAAATTCCCTGGTTTGATGTTAAATGTATATTGTGGTTTCCGCGTTTTGCGAGTTTGAAGGAAAATCTGGTCATAGAGAAGCTTCTGCTACATAATTTCTTTGATCTTCTGGCTGTCCGGATGTTGGCCACTGCACTTCACGGGGTTCGAGTCATTCTCACCATGAATAATATCAGATTTTCACAACTTCAGGTTGAGAAGTTGGGGAGAGATAGCTTTTTCACTCTAACAGAGTCATTTCCATACGACGAAAAAAGCTTCGGTGAGTTGCCAGACAAAGTAACAACTAAAAAGGCGATGTTGACGTCTCGGTCTATCTCCTATGTTTTCGTCTTGCAACCACCCAGTGCCGTCCAGTTTGGTAATTACCGTATGACACTCCATCGATGCCTACAGGACATCGAGAGAAGTAACAAGGAGATCTCACTGGTTCGTCCTTAG

Protein sequence

MASSSSSSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIPQFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKTAGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATADIGRYRDYFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSSTSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYILHSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDSAQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICSTESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSLSFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTIPLGFKEMALIGNLHAFQFWERVYKDKIRVEYLNKLVKSDKIQATTSTPSKDEEEWCSFHSLVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHENGVDQSSESRTCASLPYVASSYPRTNHVAGKLADVIKQMKVIYGKEPNNQSLSSLNNGFDVHDGTALCVYFVNGSCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGVSCFFSHDQSPSNSPSFKSTLCLPEDEKAHALTLEKYFPKSGGSILVMDDAGFHFSSNLARHCDPSKIICTTNLSRSDVYDAALKDARKFWELSHPDETIISSGKNQIPWFDVKCILWFPRFASLKENLVIEKLLLHNFFDLLAVRMLATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGELPDKVTTKKAMLTSRSISYVFVLQPPSAVQFGNYRMTLHRCLQDIERSNKEISLVRP

Homology

[Close]

BLAST of CmaCh01G003130 vs. ExPASy Swiss-Prot
Match: O22243 (DExH-box ATP-dependent RNA helicase DExH8 OS=Arabidopsis thaliana OX=3702 GN=At2g47680 PE=2 SV=2)

HSP 1 Score: 1105.1 bits (2857), Expect = 0.0e+00
Identity = 576/1016 (56.69%), Postives = 746/1016 (73.43%), Query Frame = 0


Query: 1    MASSSSSSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIP 60
            MA SS +SSSSSS SL     +F++LP+M++K RI++KI +NR+TLIVGE GCGKSSQ+P
Sbjct: 1    MAVSSPTSSSSSSESLPLPSSNFASLPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVP 60

Query: 61   QFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKT 120
            QFLL+ +M PILCTQPRRFAVVA+A MVA++RN ++G E+GYHIGHSK  +E SKI+FKT
Sbjct: 61   QFLLEANMAPILCTQPRRFAVVAVAKMVAKSRNSDLGGEIGYHIGHSKILTEGSKILFKT 120

Query: 121  AGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATAD 180
            AGVLL+EM D+GL AL YKVI+LDEVHERSVESDLVLVCVKQFL+KN+DLRVVLMSATAD
Sbjct: 121  AGVLLDEMLDKGLNALKYKVIILDEVHERSVESDLVLVCVKQFLMKNNDLRVVLMSATAD 180

Query: 181  IGRYRDYFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQS-SNGFSS 240
            I RYRDYFKELGRGERVEV+AIPS  Q+T F+ +V YLE+V  LLG+ SDL +   G S 
Sbjct: 181  ITRYRDYFKELGRGERVEVVAIPSPDQRTIFQRRVLYLEQVAGLLGVSSDLSAYCPGPSP 240

Query: 241  STSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKS-LSSFKVY 300
            S++  EIKPE+  LIH+L+L+IH+ E DIEKSIL+FLPTYYSLEQQ+H L+   +SF+V+
Sbjct: 241  SSADTEIKPELQNLIHDLILYIHEKEPDIEKSILVFLPTYYSLEQQYHQLEPFFASFEVH 300

Query: 301  ILHSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKK 360
            ILH SID EQAL AM+I +S RKVILATNIAESSVTIPKVAYVID+CRSLQVFWD ++K+
Sbjct: 301  ILHRSIDTEQALAAMKICRSRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKR 360

Query: 361  DSAQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLI 420
            D+ Q+VW+S+SQAEQRRGRTGRTCDG+VYRLVP +F++K E+ E P+IL+LSLRQQVL I
Sbjct: 361  DAVQLVWVSRSQAEQRRGRTGRTCDGEVYRLVPSAFFNKLEEHEPPSILKLSLRQQVLHI 420

Query: 421  CSTESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASF 480
            C TES+AIND   LL KA+DPPD +VV+DAL +L+ ++AL+K+PRGRYEPT+YG LLASF
Sbjct: 421  CCTESRAINDANALLAKAMDPPDPDVVDDALRMLLSIQALRKSPRGRYEPTFYGRLLASF 480

Query: 481  SLSFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESID 540
             LSFD+S+L++KFG++GML +GILLG+LMDT PLP+  PFG+++L+ EY+  YF G    
Sbjct: 481  PLSFDASILVVKFGEMGMLRQGILLGVLMDTLPLPIHHPFGDDSLFLEYVDHYFGGSK-- 540

Query: 541  TIPLGFKEMALIGNLHAFQFWERVYKDKIRVEYLNKLVKSDKIQATTSTPSKDEEEWCSF 600
            TI  G +EM L+ N  AFQFW+RV+KDK R+E L +L+  +K +       + E+EWC F
Sbjct: 541  TISGGRREMVLMANFCAFQFWQRVFKDKHRLENLKQLLSKEKDKDLKLMFPEIEKEWCDF 600

Query: 601  HSLVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTP-QFQHSCILKC------- 660
            H++  SS  HVSE+YED + + H+FRP+F+   D   +   P +F H+C ++C       
Sbjct: 601  HNIAQSSFYHVSELYEDTLSSFHRFRPQFISSSDSQPTYYNPYEFDHTCYIECQPSEDKY 660

Query: 661  -HENGVDQSS---ESRTCASLPYVASSYPRTNHVAGKLADVIKQMKVIYGKEPNNQSLSS 720
             H   VD +    E R C S+P+V  +  + N +A  +A +IK+++       ++    +
Sbjct: 661  LHSEDVDNNQPPPEVRKCVSVPFVPPNAFQANAIAENMASIIKEIRTQCTPSESDNGHGA 720

Query: 721  LNNGFDVHDGTA-LCVYFVNGSCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGVSCFFS 780
            L     V  G A +CVYF+NG CNRG QC F+H+LQS R  CKFF S QGCRNG SC FS
Sbjct: 721  LEPEDYVEYGEAPVCVYFLNGYCNRGGQCTFTHTLQSTRPACKFFASSQGCRNGESCLFS 780

Query: 781  HDQSPSNSPSFKSTLCLPEDEKAHALTLEKYFPKSG-GSILVMDDAGFHFSSNLARHCDP 840
            H      +       CLPE++ +    L   FP S  G ILV DD+  HF+S++A     
Sbjct: 781  HAMRRRTTSYLPPPQCLPEEDGSSTSPLLDLFPTSSEGCILVFDDSDMHFTSSIANRYPS 840

Query: 841  SKIICTTNLSRSDVYDAALKDARKFWELSHPDETIISSG--KNQIPWFDVKCILWFPRFA 900
             +I+ T++ S +   D++L D R FW L+HP +TIIS    +N IPW +VKC+LWF    
Sbjct: 841  WRILSTSSSSETLFCDSSLADTRIFWGLNHPYQTIISKAGRENPIPWNEVKCVLWFLNPD 900

Query: 901  SLKENLVIEKLLLHNFFDLLAVRMLATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLT 960
            S  +    +K +L NFF+ +A+R+L   L+ +RV+LTMNN+RFS LQVEKL R+SFF L 
Sbjct: 901  SYADTPEKQKTILQNFFEHMAIRLLGDKLYKIRVVLTMNNVRFSLLQVEKLARESFFFLG 960

Query: 961  ESFPYDEKSFGELPDKVTTKKAMLTSRSISYVFVLQPPSAVQFGNYRMTLHRCLQD 999
            ESFP+D +SFG   D +T +K ML SR ISYVF L PPS +QFGNY   L + L +
Sbjct: 961  ESFPHDSESFGAFQDTLTIQKPMLVSRPISYVFNLHPPSDIQFGNYTSLLRKSLHN 1014

[Close]

BLAST of CmaCh01G003130 vs. ExPASy Swiss-Prot
Match: Q1EHT7 (Zinc finger CCCH domain-containing protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0256800 PE=2 SV=1)

HSP 1 Score: 974.2 bits (2517), Expect = 1.2e-282
Identity = 518/1001 (51.75%), Postives = 694/1001 (69.33%), Query Frame = 0


Query: 26   LPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIPQFLLDEDMGPILCTQPRRFAVVAIA 85
            L V +L+ +IVEK++ NR+TLIVG+TGCGKSS +PQFLL+E+M PILCTQPRRFAVVAIA
Sbjct: 18   LAVEALRGKIVEKVKGNRVTLIVGDTGCGKSSMVPQFLLEENMEPILCTQPRRFAVVAIA 77

Query: 86   NMVARARNCNVGEEVGYHIGHSKHS---SERSKIVFKTAGVLLEEMRDRGLKALDYKVIV 145
             M+A +RNC VGEEVGYHIGHS  S   S+RS+IVFKTAGV+LE+MRD+G+ AL+YKVI+
Sbjct: 78   QMIAESRNCQVGEEVGYHIGHSNVSNLNSKRSRIVFKTAGVVLEQMRDKGIAALNYKVII 137

Query: 146  LDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATADIGRYRDYFKELGRGERVEVLAI 205
            LDE+HERSVESDLVL CVKQF++K +DLR++LMSATADI RY+DYF++LGRGERVEV+AI
Sbjct: 138  LDEIHERSVESDLVLACVKQFMMKKNDLRLILMSATADITRYKDYFRDLGRGERVEVIAI 197

Query: 206  PSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSSTSSVE--IKPEVHKLIHNLLLH 265
            PSS + + F+ KV YLE++ ++L ++S+  S+   S   ++ +  +KP+V++LIH LLLH
Sbjct: 198  PSSPRSSIFQRKVLYLEQIVDILKMDSESLSTKYCSGPNTAADAGLKPDVYELIHRLLLH 257

Query: 266  IHKNESDIEKSILIFLPTYYSLEQQW-HLLKSLSSFKVYILHSSIDIEQALTAMRIWKSH 325
            IH+NE DI KSIL+FLPTYY+LEQQW  LL + S FKV+ILH SID ++AL  M++ KS 
Sbjct: 258  IHQNEPDIGKSILVFLPTYYALEQQWIRLLSASSMFKVHILHRSIDTDEALQTMKVSKSC 317

Query: 326  RKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDSAQVVWISKSQAEQRRGRTG 385
            RKVILATNIAESSVTIP VAYVID+CRSLQV+WD  +K DSA++VW+SKSQAEQR+GRTG
Sbjct: 318  RKVILATNIAESSVTIPGVAYVIDSCRSLQVYWDPIRKTDSAELVWVSKSQAEQRKGRTG 377

Query: 386  RTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICSTESKAINDPTVLLQKALDP 445
            RTCDGQ+YRLV   FY+   D E PAILRLSLR+QVL+IC  ES+A+NDP VLLQK LDP
Sbjct: 378  RTCDGQIYRLVTGPFYNSLTDHEYPAILRLSLREQVLMICCAESRAMNDPHVLLQKVLDP 437

Query: 446  PDGNVVEDALNLLVRMKALKK--TPRGRYEPTYYGSLLASFSLSFDSSVLILKFGDIGML 505
            PD +VVEDAL  LV+++AL K  +PRGR+EPT+YG LL S  LSFD+SVL LKFGD G +
Sbjct: 438  PDSDVVEDALESLVQIRALDKPTSPRGRHEPTFYGCLLNSLPLSFDASVLALKFGDTGSI 497

Query: 506  HEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTIPLGFKEMALIGNLHAFQ 565
             EGIL+ I++D QPLP+++PFG   L   Y  +YF+ E ID +  G KE AL+GNL AFQ
Sbjct: 498  CEGILISIMLDIQPLPIVQPFGHQQLCKMYRNNYFEEEGID-LQTGKKEAALVGNLCAFQ 557

Query: 566  FWERVYKDKIRVEYLNKLVKSDKIQATTSTPSKDEEEWCSFHSLVHSSLNHVSEMYEDII 625
            FW+R++KDK R++ L  +V + + +A+    +K E+EWC+FH+LV ++LN++SE+Y+DI+
Sbjct: 558  FWQRMFKDKYRLDCLINVVNTHEPKASNGFVAKPEDEWCAFHNLVPTALNYISEIYDDIM 617

Query: 626  HTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHE-------NGVDQSSES------RTC 685
             TLH+FRP FL   +        +F H C+   HE       N +   +E+      R C
Sbjct: 618  GTLHRFRPSFLVKINPPMYLQPSEFHHMCLR--HEVLELENVNSLPLEAENSHLDSHRRC 677

Query: 686  ASLPYVASSYPRTNHVAGKLADVIKQMK-------VIYGKEPNNQSLSSLNNGFDVHDGT 745
            A+ PYV+ +   T  V   L  +IK+MK       V Y +  +     +L N        
Sbjct: 678  AATPYVSPADFGTTTVVKTLKTLIKEMKTQSAADRVTYRELVHGYVQPALEN-------- 737

Query: 746  ALCVYFVNGSCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGVSCFFSHDQSPSNSPSFK 805
             +CV+F+NGSCNRGD C FSHS ++ R  CKFF +LQGCRNG SC FSHD     S S  
Sbjct: 738  EMCVFFLNGSCNRGDTCHFSHSSRAPRPICKFFLTLQGCRNGNSCSFSHDSGSLVSSSIT 797

Query: 806  STLCLPEDEKAHALTLEKYFPKSG-GSILVMDDAGFHFSSNLARHCDPSKIICTTNLSRS 865
            S +C  ++ +A ++  ++  P +G G ILVM+D    F+  L  + DP+KII  T    S
Sbjct: 798  SGIC-SQENRATSVCCKRLLPAAGDGHILVMNDKSLQFACKLCNYYDPTKIIACTPGPHS 857

Query: 866  DVYDAALKDARKFWELSHPDETII-SSGKNQIPWFDVKCILWFPRFASLKENLVIEKLLL 925
               D+  K  +    L+ P    I    K  +PW  +  + WF    S     + E+++L
Sbjct: 858  FESDSVTKGLKILQNLADPSYLFIGGEHKLSVPWTKLSRVFWFADIDS--NESISEQVVL 917

Query: 926  HNFFDLLAVRMLATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGEL 985
              FF  +A++ L+  +  ++VI+ MNN +F QLQVE+L R+ F  L ESF +DE + G  
Sbjct: 918  QKFFQHIAIKTLSEKMSDLQVIVIMNNAKFVQLQVERLARECFLFLGESFMFDEATLGWF 977

Query: 986  PDKVTTKKAMLTSRSISYVFVLQPPSAVQFGNYRMTLHRCL 997
             D     + M  S  ++Y+F + PP+ +QFG+Y   L + L
Sbjct: 978  SDTPNYPRGMQVSAPVAYIFSMHPPTGIQFGDYASELRKVL 1004

[Close]

BLAST of CmaCh01G003130 vs. ExPASy Swiss-Prot
Match: Q6PGC1 (ATP-dependent RNA helicase DHX29 OS=Mus musculus OX=10090 GN=Dhx29 PE=1 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 5.4e-62
Identity = 203/665 (30.53%), Postives = 325/665 (48.87%), Query Frame = 0


Query: 26   LPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIPQFLLD----EDMGP----ILCTQPR 85
            LPV   ++ IVE ++++R+ ++ GETG GKS+Q+P FLL+    ++ G     I+CTQPR
Sbjct: 571  LPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDECGARKCNIVCTQPR 630

Query: 86   RFAVVAIANMVARARNCNVG-----EEVGYHIGHSKHSSERSKIVFKTAGVLLEEMRDRG 145
            R + V++A  V     C  G        GY I     +SE +++++ T GVLL ++++ G
Sbjct: 631  RISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDG 690

Query: 146  LKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATADIGRYRDYFKEL- 205
            L A D   +++DEVHERSV+SD +LV +K+ L K  DL ++LMSAT D  ++  YF    
Sbjct: 691  LLA-DVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCP 750

Query: 206  -----GRGERVEVLAIPSSSQKTFF------ECKVSYLEEVNELL--------GIES--- 265
                 GR   VEV  +    ++T F      E    +LEE  E+         G++    
Sbjct: 751  ILRISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGGVKKYQE 810

Query: 266  --DLQSS---------NGFSSSTSSVEIKPEVHK----LIHNLLLHIHKNES--DIEKSI 325
               +QS            +SS T    +    HK    LI  LL+++ K+    +IE ++
Sbjct: 811  YIPVQSGASPELNPFYQKYSSRTQHAILYMNPHKINLDLILELLVYLDKSPQFRNIEGAV 870

Query: 326  LIFLPTYYSLEQQWHLLKS-----LSSFKVYILHSSIDI-EQALTAMRIWKSHRKVILAT 385
            LIFLP    ++Q + LL S        ++V  LHS +   +QA   M      RK++LAT
Sbjct: 871  LIFLPGLAHIQQLYDLLSSDRRFYSERYQVIALHSVLSTQDQAAAFMFPPPGVRKIVLAT 930

Query: 386  NIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDSAQVVWISKSQAEQRRGRTGRTCDGQV 445
            NIAE+ +TIP V +VIDT R+ +  +  + +  S    ++SK+ A QR+GR GR  DG  
Sbjct: 931  NIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFC 990

Query: 446  YRLVPRSFYHKFEDFERPAILRLSLRQQVLLICSTESKAINDPTVLLQKALDPPDGNVVE 505
            +RL  R  +  F D+  P ILR+ L +  L I   +   +  P   L KALDPP   V+ 
Sbjct: 991  FRLYTRERFEGFLDYSVPEILRVPLEELCLHIMKCD---LGSPEDFLSKALDPPQLQVIS 1050

Query: 506  DALNLLVRMKALKKTPRGRYEP--TYYGSLLASFSLSFDSSVLILKFGDIGMLHEGILLG 565
            +A+NLL ++ A +       EP  T  G  LA+  ++     +++     G L     L 
Sbjct: 1051 NAMNLLRKIGACEPN-----EPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLA 1110

Query: 566  ILMDTQPLPVLRPFGENNLYAEYIKSYF-----DGESIDTIPLGFKEMALIGNLHA-FQF 617
             +M T+  P + P G  +  A+  KS       D  +I    LG+K+    G   +   +
Sbjct: 1111 AVM-TEKSPFITPIGRKD-EADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEISY 1170

[Close]

BLAST of CmaCh01G003130 vs. ExPASy Swiss-Prot
Match: Q16JS8 (Probable ATP-dependent RNA helicase spindle-E OS=Aedes aegypti OX=7159 GN=spn-E PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 1.2e-61
Identity = 172/545 (31.56%), Postives = 288/545 (52.84%), Query Frame = 0


Query: 26  LPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIPQFLLDE-----DMGPILCTQPRRFA 85
           LP+   K+ I+ +IR+N + ++ G TGCGK++Q+PQF+L+E     +   I+ TQPR+ A
Sbjct: 36  LPIRHSKDDILARIRENPVIVLEGPTGCGKTTQVPQFILEEAYHRKEYCNIIVTQPRKIA 95

Query: 86  VVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKTAGVLLEEMRDRGLKALDYKV 145
            ++IA  V+  R C +G  VG+ +G  +  S  +++++ T GVLL+ + +    A +Y  
Sbjct: 96  AMSIAKRVSEERKCELGTLVGFKVGLKECLSPDTRLLYCTTGVLLQSLINSKTMA-NYTH 155

Query: 146 IVLDEVHERSVESDLVLVCVKQFLLKNHD-LRVVLMSATADIGRYRDYFKELGRGERVEV 205
           ++LDE+HER V+ D +L+ V++FL  N    +V+LMSAT D   + +YFK     ++V  
Sbjct: 156 VILDEIHEREVDMDFLLIVVRRFLATNSSKTKVILMSATIDSKAFAEYFK---TPKKVGY 215

Query: 206 LAIP--SSSQKTFFECKVSYLEEVNEL-LGIESDLQSSNGFSSSTSSVEIKPEVHKLIHN 265
           L  P  S  +   +E K  Y +++++L L    D ++  G SS   +V  K  +  +   
Sbjct: 216 LTAPIISVDRPRLYEVKEFYYDDLDKLRLDFAIDYENP-GISSHMYTVAAK--LVLVCDR 275

Query: 266 LLLHIHKNE-SDIEKSILIFLPTYYSLEQQWHLL----------KSLSSFKVYILHSSID 325
           L+ ++H  E  + + ++LIFLP    +++  H+L          K   +  ++ LHS + 
Sbjct: 276 LIENMHGEERMEYKPTVLIFLPGINEIDRMDHVLRETLTRIVNPKEKPNLDIHRLHSILP 335

Query: 326 IEQALTAMR-IWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDSAQVV 385
            ++ +   R      RKVIL+TNIAESS+T+P V ++ID C    +F D      + +  
Sbjct: 336 ADEQVKVFRKPAPGQRKVILSTNIAESSITVPDVKFIIDFCLQRVLFTDTTTNFSTLRTE 395

Query: 386 WISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFE-RPAILRLSLRQQVLLICSTES 445
           W S++   QR+GR GR  DG+VYRLV R FY     F   P ILR  L   +L     + 
Sbjct: 396 WASQANCIQRQGRAGRVMDGRVYRLVDRRFYENQMRFSTSPEILRCPLENVIL---KAKL 455

Query: 446 KAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEP-----TYYGSLLASF 505
             +  P  +L  A++PPD + + + +  L  + AL +T +G YE      TY G ++A  
Sbjct: 456 LEMGPPHSILALAMNPPDLSDIRNTVLQLKELGALVQTVKGNYEQLDGDLTYMGRIMAKL 515

Query: 506 SLSFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYF-DGESI 543
            L    S LI+      +L E I++   M+ + + +     +N++     K Y+ DG   
Sbjct: 516 PLDLRISKLIILGYIFSVLEESIIIAAGMNEKNIFL----NQNSVRGYSQKMYWADGSGS 566

[Close]

BLAST of CmaCh01G003130 vs. ExPASy Swiss-Prot
Match: Q7Z478 (ATP-dependent RNA helicase DHX29 OS=Homo sapiens OX=9606 GN=DHX29 PE=1 SV=2)

HSP 1 Score: 231.9 bits (590), Expect = 3.3e-59
Identity = 177/561 (31.55%), Postives = 277/561 (49.38%), Query Frame = 0


Query: 26   LPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIPQFLLDE--------DMGPILCTQPR 85
            LPV   ++ IVE ++++R+ ++ GETG GKS+Q+P FLL++            I+CTQPR
Sbjct: 572  LPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEASKCNIVCTQPR 631

Query: 86   RFAVVAIANMVARARNCNVG-----EEVGYHIGHSKHSSERSKIVFKTAGVLLEEMRDRG 145
            R + V++AN V     C  G        GY I     + E +++++ T GVLL ++++ G
Sbjct: 632  RISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGVLLRKLQEDG 691

Query: 146  LKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATADIGRYRDYFKEL- 205
            L + +   +++DEVHERSV+SD +L+ +K+ L K  DL ++LMSAT D  ++  YF    
Sbjct: 692  LLS-NVSHVIVDEVHERSVQSDFLLIILKEILQKRSDLHLILMSATVDSEKFSTYFTHCP 751

Query: 206  -----GRGERVEVLAIPSSSQKTFF------ECKVSYLEEVNEL---------------- 265
                 GR   VEV  +    ++T F      E    +LEE  E+                
Sbjct: 752  ILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEVTINVTSKAGGIKKYQE 811

Query: 266  -----LGIESDLQS-SNGFSSSTSSVEIKPEVHK----LIHNLLLHIHKNES--DIEKSI 325
                  G  +DL      +SS T    +    HK    LI  LL ++ K+    +IE ++
Sbjct: 812  YIPVQTGAHADLNPFYQKYSSRTQHAILYMNPHKINLDLILELLAYLDKSPQFRNIEGAV 871

Query: 326  LIFLPTYYSLEQQWHLLKS-----LSSFKVYILHSSIDIEQALTAMRI-WKSHRKVILAT 385
            LIFLP    ++Q + LL +        +KV  LHS +  +    A  +     RK++LAT
Sbjct: 872  LIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLAT 931

Query: 386  NIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDSAQVVWISKSQAEQRRGRTGRTCDGQV 445
            NIAE+ +TIP V +VIDT R+ +  +  + +  S    ++SK+ A QR+GR GR  DG  
Sbjct: 932  NIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFC 991

Query: 446  YRLVPRSFYHKFEDFERPAILRLSLRQQVLLICSTESKAINDPTVLLQKALDPPDGNVVE 505
            +R+  R  +  F D+  P ILR+ L +  L I       +  P   L KALDPP   V+ 
Sbjct: 992  FRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCN---LGSPEDFLSKALDPPQLQVIS 1051

Query: 506  DALNLLVRMKAL-----KKTPRGRYEPTYYGSLLASFSLSFDSSVLILKFGDIGMLHEGI 523
            +A+NLL ++ A      K TP G++        LA+  ++     +++     G L    
Sbjct: 1052 NAMNLLRKIGACELNEPKLTPLGQH--------LAALPVNVKIGKMLIFGAIFGCLDPVA 1111

[Close]

BLAST of CmaCh01G003130 vs. ExPASy TrEMBL
Match: A0A6J1KAE9 (DExH-box ATP-dependent RNA helicase DExH8 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493135 PE=4 SV=1)

HSP 1 Score: 2005.3 bits (5194), Expect = 0.0e+00
Identity = 1011/1011 (100.00%), Postives = 1011/1011 (100.00%), Query Frame = 0


Query: 1    MASSSSSSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIP 60
            MASSSSSSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIP
Sbjct: 1    MASSSSSSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIP 60

Query: 61   QFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKT 120
            QFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKT
Sbjct: 61   QFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKT 120

Query: 121  AGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATAD 180
            AGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATAD
Sbjct: 121  AGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATAD 180

Query: 181  IGRYRDYFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSS 240
            IGRYRDYFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSS
Sbjct: 181  IGRYRDYFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSS 240

Query: 241  TSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYIL 300
            TSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYIL
Sbjct: 241  TSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYIL 300

Query: 301  HSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDS 360
            HSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDS
Sbjct: 301  HSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDS 360

Query: 361  AQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICS 420
            AQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICS
Sbjct: 361  AQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICS 420

Query: 421  TESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSL 480
            TESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSL
Sbjct: 421  TESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSL 480

Query: 481  SFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTI 540
            SFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTI
Sbjct: 481  SFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTI 540

Query: 541  PLGFKEMALIGNLHAFQFWERVYKDKIRVEYLNKLVKSDKIQATTSTPSKDEEEWCSFHS 600
            PLGFKEMALIGNLHAFQFWERVYKDKIRVEYLNKLVKSDKIQATTSTPSKDEEEWCSFHS
Sbjct: 541  PLGFKEMALIGNLHAFQFWERVYKDKIRVEYLNKLVKSDKIQATTSTPSKDEEEWCSFHS 600

Query: 601  LVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHENGVDQSSE 660
            LVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHENGVDQSSE
Sbjct: 601  LVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHENGVDQSSE 660

Query: 661  SRTCASLPYVASSYPRTNHVAGKLADVIKQMKVIYGKEPNNQSLSSLNNGFDVHDGTALC 720
            SRTCASLPYVASSYPRTNHVAGKLADVIKQMKVIYGKEPNNQSLSSLNNGFDVHDGTALC
Sbjct: 661  SRTCASLPYVASSYPRTNHVAGKLADVIKQMKVIYGKEPNNQSLSSLNNGFDVHDGTALC 720

Query: 721  VYFVNGSCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGVSCFFSHDQSPSNSPSFKSTL 780
            VYFVNGSCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGVSCFFSHDQSPSNSPSFKSTL
Sbjct: 721  VYFVNGSCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGVSCFFSHDQSPSNSPSFKSTL 780

Query: 781  CLPEDEKAHALTLEKYFPKSGGSILVMDDAGFHFSSNLARHCDPSKIICTTNLSRSDVYD 840
            CLPEDEKAHALTLEKYFPKSGGSILVMDDAGFHFSSNLARHCDPSKIICTTNLSRSDVYD
Sbjct: 781  CLPEDEKAHALTLEKYFPKSGGSILVMDDAGFHFSSNLARHCDPSKIICTTNLSRSDVYD 840

Query: 841  AALKDARKFWELSHPDETIISSGKNQIPWFDVKCILWFPRFASLKENLVIEKLLLHNFFD 900
            AALKDARKFWELSHPDETIISSGKNQIPWFDVKCILWFPRFASLKENLVIEKLLLHNFFD
Sbjct: 841  AALKDARKFWELSHPDETIISSGKNQIPWFDVKCILWFPRFASLKENLVIEKLLLHNFFD 900

Query: 901  LLAVRMLATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGELPDKVT 960
            LLAVRMLATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGELPDKVT
Sbjct: 901  LLAVRMLATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGELPDKVT 960

Query: 961  TKKAMLTSRSISYVFVLQPPSAVQFGNYRMTLHRCLQDIERSNKEISLVRP 1012
            TKKAMLTSRSISYVFVLQPPSAVQFGNYRMTLHRCLQDIERSNKEISLVRP
Sbjct: 961  TKKAMLTSRSISYVFVLQPPSAVQFGNYRMTLHRCLQDIERSNKEISLVRP 1011

[Close]

BLAST of CmaCh01G003130 vs. ExPASy TrEMBL
Match: A0A6J1KEJ9 (DExH-box ATP-dependent RNA helicase DExH8 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493135 PE=4 SV=1)

HSP 1 Score: 1990.3 bits (5155), Expect = 0.0e+00
Identity = 1011/1039 (97.31%), Postives = 1011/1039 (97.31%), Query Frame = 0


Query: 1    MASSSSSSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIP 60
            MASSSSSSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIP
Sbjct: 1    MASSSSSSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIP 60

Query: 61   QFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKT 120
            QFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKT
Sbjct: 61   QFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKT 120

Query: 121  AGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATAD 180
            AGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATAD
Sbjct: 121  AGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATAD 180

Query: 181  IGRYRDYFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSS 240
            IGRYRDYFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSS
Sbjct: 181  IGRYRDYFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSS 240

Query: 241  TSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYIL 300
            TSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYIL
Sbjct: 241  TSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYIL 300

Query: 301  HSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDS 360
            HSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDS
Sbjct: 301  HSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDS 360

Query: 361  AQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICS 420
            AQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICS
Sbjct: 361  AQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICS 420

Query: 421  TESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSL 480
            TESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSL
Sbjct: 421  TESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSL 480

Query: 481  SFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNL----------------- 540
            SFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNL                 
Sbjct: 481  SFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLVFLDCYLLGFPYLTLAC 540

Query: 541  -----------YAEYIKSYFDGESIDTIPLGFKEMALIGNLHAFQFWERVYKDKIRVEYL 600
                       YAEYIKSYFDGESIDTIPLGFKEMALIGNLHAFQFWERVYKDKIRVEYL
Sbjct: 541  ILINFESYLIQYAEYIKSYFDGESIDTIPLGFKEMALIGNLHAFQFWERVYKDKIRVEYL 600

Query: 601  NKLVKSDKIQATTSTPSKDEEEWCSFHSLVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCD 660
            NKLVKSDKIQATTSTPSKDEEEWCSFHSLVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCD
Sbjct: 601  NKLVKSDKIQATTSTPSKDEEEWCSFHSLVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCD 660

Query: 661  ILRSSNTPQFQHSCILKCHENGVDQSSESRTCASLPYVASSYPRTNHVAGKLADVIKQMK 720
            ILRSSNTPQFQHSCILKCHENGVDQSSESRTCASLPYVASSYPRTNHVAGKLADVIKQMK
Sbjct: 661  ILRSSNTPQFQHSCILKCHENGVDQSSESRTCASLPYVASSYPRTNHVAGKLADVIKQMK 720

Query: 721  VIYGKEPNNQSLSSLNNGFDVHDGTALCVYFVNGSCNRGDQCLFSHSLQSRRATCKFFFS 780
            VIYGKEPNNQSLSSLNNGFDVHDGTALCVYFVNGSCNRGDQCLFSHSLQSRRATCKFFFS
Sbjct: 721  VIYGKEPNNQSLSSLNNGFDVHDGTALCVYFVNGSCNRGDQCLFSHSLQSRRATCKFFFS 780

Query: 781  LQGCRNGVSCFFSHDQSPSNSPSFKSTLCLPEDEKAHALTLEKYFPKSGGSILVMDDAGF 840
            LQGCRNGVSCFFSHDQSPSNSPSFKSTLCLPEDEKAHALTLEKYFPKSGGSILVMDDAGF
Sbjct: 781  LQGCRNGVSCFFSHDQSPSNSPSFKSTLCLPEDEKAHALTLEKYFPKSGGSILVMDDAGF 840

Query: 841  HFSSNLARHCDPSKIICTTNLSRSDVYDAALKDARKFWELSHPDETIISSGKNQIPWFDV 900
            HFSSNLARHCDPSKIICTTNLSRSDVYDAALKDARKFWELSHPDETIISSGKNQIPWFDV
Sbjct: 841  HFSSNLARHCDPSKIICTTNLSRSDVYDAALKDARKFWELSHPDETIISSGKNQIPWFDV 900

Query: 901  KCILWFPRFASLKENLVIEKLLLHNFFDLLAVRMLATALHGVRVILTMNNIRFSQLQVEK 960
            KCILWFPRFASLKENLVIEKLLLHNFFDLLAVRMLATALHGVRVILTMNNIRFSQLQVEK
Sbjct: 901  KCILWFPRFASLKENLVIEKLLLHNFFDLLAVRMLATALHGVRVILTMNNIRFSQLQVEK 960

Query: 961  LGRDSFFTLTESFPYDEKSFGELPDKVTTKKAMLTSRSISYVFVLQPPSAVQFGNYRMTL 1012
            LGRDSFFTLTESFPYDEKSFGELPDKVTTKKAMLTSRSISYVFVLQPPSAVQFGNYRMTL
Sbjct: 961  LGRDSFFTLTESFPYDEKSFGELPDKVTTKKAMLTSRSISYVFVLQPPSAVQFGNYRMTL 1020

[Close]

BLAST of CmaCh01G003130 vs. ExPASy TrEMBL
Match: A0A6J1GBX6 (LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH8 OS=Cucurbita moschata OX=3662 GN=LOC111452575 PE=4 SV=1)

HSP 1 Score: 1966.0 bits (5092), Expect = 0.0e+00
Identity = 988/1005 (98.31%), Postives = 995/1005 (99.00%), Query Frame = 0


Query: 7    SSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIPQFLLDE 66
            +SSSSSST LSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIPQFLLDE
Sbjct: 2    ASSSSSSTLLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIPQFLLDE 61

Query: 67   DMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKTAGVLLE 126
            DMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKI+FKTAGVLLE
Sbjct: 62   DMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIIFKTAGVLLE 121

Query: 127  EMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATADIGRYRD 186
            EMRDRGLKALDYKVIVLDEVHERS ESDLVLVCVKQFLLKNHDLRVVLMSATADIGRYRD
Sbjct: 122  EMRDRGLKALDYKVIVLDEVHERSAESDLVLVCVKQFLLKNHDLRVVLMSATADIGRYRD 181

Query: 187  YFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSSTSSVEI 246
            YFKELGRGERVEVLAIPSSSQKTFFE KVSYLEEVNELLGIESDLQSSNGFS STSSVEI
Sbjct: 182  YFKELGRGERVEVLAIPSSSQKTFFERKVSYLEEVNELLGIESDLQSSNGFSPSTSSVEI 241

Query: 247  KPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYILHSSIDI 306
            KPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSL+SFKVYILHSSIDI
Sbjct: 242  KPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLNSFKVYILHSSIDI 301

Query: 307  EQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDSAQVVWI 366
            EQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVID+CRSLQVFWDNNQKKDSAQVVWI
Sbjct: 302  EQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDNNQKKDSAQVVWI 361

Query: 367  SKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICSTESKAI 426
            SKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICSTESKAI
Sbjct: 362  SKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICSTESKAI 421

Query: 427  NDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSLSFDSSV 486
            NDPTVLLQKALDPPDGNVVEDALNLLVRMKALK+TPRGRYEPTYYGSLLASFSLSFDSSV
Sbjct: 422  NDPTVLLQKALDPPDGNVVEDALNLLVRMKALKRTPRGRYEPTYYGSLLASFSLSFDSSV 481

Query: 487  LILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTIPLGFKE 546
            LILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTIPLGFKE
Sbjct: 482  LILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTIPLGFKE 541

Query: 547  MALIGNLHAFQFWERVYKDKIRVEYLNKLVKSDKIQATTSTPSKDEEEWCSFHSLVHSSL 606
            MALIGNLHAFQFWERVYKDKIRVEYLNKLVKSD+IQATTSTPSKDEEEWCSFHSLVHSSL
Sbjct: 542  MALIGNLHAFQFWERVYKDKIRVEYLNKLVKSDEIQATTSTPSKDEEEWCSFHSLVHSSL 601

Query: 607  NHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHENGVDQSSESRTCAS 666
            NHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHENGVDQSSESRTCAS
Sbjct: 602  NHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHENGVDQSSESRTCAS 661

Query: 667  LPYVASSYPRTNHVAGKLADVIKQMKVIYGKEPNNQSLSSLNNGFDVHDGTALCVYFVNG 726
            LPYVASSYPRTNHVAGKLADVIKQMKVIYGKEPNNQSLSSL+NGFDVHDGTALCVYFVNG
Sbjct: 662  LPYVASSYPRTNHVAGKLADVIKQMKVIYGKEPNNQSLSSLDNGFDVHDGTALCVYFVNG 721

Query: 727  SCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGVSCFFSHDQSPSNSPSFKSTLCLPEDE 786
            SCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNG SCFFSHDQSPSNSPSFKSTLCLPEDE
Sbjct: 722  SCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGDSCFFSHDQSPSNSPSFKSTLCLPEDE 781

Query: 787  KAHALTLEKYFPKSGGSILVMDDAGFHFSSNLARHCDPSKIICTTNLSRSDVYDAALKDA 846
            KAHALTLEKYFPKSGGSILVMDDAGFHFSSNLARHCDPSKIICTTNLSRSDVYDAALKDA
Sbjct: 782  KAHALTLEKYFPKSGGSILVMDDAGFHFSSNLARHCDPSKIICTTNLSRSDVYDAALKDA 841

Query: 847  RKFWELSHPDETIISSGKNQIPWFDVKCILWFPRFASLKENLVIEKLLLHNFFDLLAVRM 906
            RKFWELSHPDETIISSGKNQIPWFDVKCILWFPRFAS KENLVIEKLLL NFFDLLAVRM
Sbjct: 842  RKFWELSHPDETIISSGKNQIPWFDVKCILWFPRFASSKENLVIEKLLLQNFFDLLAVRM 901

Query: 907  LATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGELPDKVTTKKAML 966
            LATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGELPDKVTTKKAML
Sbjct: 902  LATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGELPDKVTTKKAML 961

Query: 967  TSRSISYVFVLQPPSAVQFGNYRMTLHRCLQDIERSNKEISLVRP 1012
             SR ISYVFVLQPPSAVQFGNYRMTLHRCLQDIER NKEISLVRP
Sbjct: 962  MSRPISYVFVLQPPSAVQFGNYRMTLHRCLQDIERCNKEISLVRP 1006

[Close]

BLAST of CmaCh01G003130 vs. ExPASy TrEMBL
Match: A0A1S3BZ58 (DExH-box ATP-dependent RNA helicase DExH8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494773 PE=4 SV=1)

HSP 1 Score: 1745.3 bits (4519), Expect = 0.0e+00
Identity = 883/1005 (87.86%), Postives = 937/1005 (93.23%), Query Frame = 0


Query: 1    MASSSSSSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIP 60
            MASSSSSSSSSSS+  S SP  FSALPVMSL+ERIVEKIR+NR+TLIVGETGCGKSSQIP
Sbjct: 1    MASSSSSSSSSSSS--SPSPLVFSALPVMSLRERIVEKIRQNRVTLIVGETGCGKSSQIP 60

Query: 61   QFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKT 120
            QFLL+EDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSE+SKIVFKT
Sbjct: 61   QFLLEEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSEKSKIVFKT 120

Query: 121  AGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATAD 180
            AGVLLEEMRDRGL AL+YKVIVLDEVHERSVESDLVLVCVKQFL K+HDLRVVLMSATAD
Sbjct: 121  AGVLLEEMRDRGLNALNYKVIVLDEVHERSVESDLVLVCVKQFLSKHHDLRVVLMSATAD 180

Query: 181  IGRYRDYFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSS---NGF 240
            IGRYRDYFK+LGRGERVEVLAIP+S+QK+FFE KVSYLEEV ELLGIESDLQSS   NGF
Sbjct: 181  IGRYRDYFKDLGRGERVEVLAIPNSNQKSFFERKVSYLEEVTELLGIESDLQSSRYCNGF 240

Query: 241  SSSTSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKV 300
            S  TS VEIKPEVH+LIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKS SSFKV
Sbjct: 241  SPYTSPVEIKPEVHRLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSHSSFKV 300

Query: 301  YILHSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQK 360
            YILHSSIDIEQALTAMRIWKSHRK+ILATNIAESSVTIPKVAYVID+CRSLQV+WDNNQK
Sbjct: 301  YILHSSIDIEQALTAMRIWKSHRKIILATNIAESSVTIPKVAYVIDSCRSLQVYWDNNQK 360

Query: 361  KDSAQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLL 420
            KDSAQVVWISKSQAEQRRGRTGRTCDGQVYRLV RSFYH FEDFERP ILRLSLRQQVLL
Sbjct: 361  KDSAQVVWISKSQAEQRRGRTGRTCDGQVYRLVTRSFYHNFEDFERPDILRLSLRQQVLL 420

Query: 421  ICSTESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLAS 480
            ICSTESKAINDPTVLLQK LDPP  NVVEDAL+LLV M+ALK++PRGRYEPTYYGSLLAS
Sbjct: 421  ICSTESKAINDPTVLLQKTLDPPAANVVEDALSLLVHMQALKRSPRGRYEPTYYGSLLAS 480

Query: 481  FSLSFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESI 540
            FSLSFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESI
Sbjct: 481  FSLSFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESI 540

Query: 541  DTIPLGFKEMALIGNLHAFQFWERVYKDKIRVEYLNKLVKSDKIQATTSTPSKDEEEWCS 600
            DTI LGFKEMAL+GNLHAF FWERVYKDKIRVEYLNKL+  +K Q   S PSK+EEEWCS
Sbjct: 541  DTIQLGFKEMALLGNLHAFHFWERVYKDKIRVEYLNKLLNPNKTQTIKSPPSKNEEEWCS 600

Query: 601  FHSLVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTP-QFQHSCILKCHENGVD 660
            FHSLVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCDILRSS  P QFQHSC+LK  ENG D
Sbjct: 601  FHSLVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCDILRSSYAPTQFQHSCVLKRLENGDD 660

Query: 661  QSSESRTCASLPYVASSYPRTNHVAGKLADVIKQMKVIYGK-EPNNQSLSSLNNGFDVHD 720
            QSSESRTC SLPYVASSY RTN VAGKLADVIKQMKV Y K EPNN SLSS+N+GF+VH+
Sbjct: 661  QSSESRTCVSLPYVASSYSRTNQVAGKLADVIKQMKVFYAKEEPNNHSLSSINDGFNVHN 720

Query: 721  GTALCVYFVNGSCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGVSCFFSHDQSPSNSPS 780
            GT++CVYF+NGSCNRG +C+FSHSLQS+RATCKFFFSLQGCRNG SC FSHDQSPS S S
Sbjct: 721  GTSICVYFLNGSCNRGSRCIFSHSLQSKRATCKFFFSLQGCRNGDSCLFSHDQSPSKSLS 780

Query: 781  FKSTLCLPEDEKAHALTLEKYFPKSGGSILVMDDAGFHFSSNLARHCDPSKIICTTNLSR 840
            FKSTLCLPED  AHA TLEKYFPKSGG ILVMDDAGFHFSSNLARHCDPSKIICTTNLS 
Sbjct: 781  FKSTLCLPEDGIAHASTLEKYFPKSGGCILVMDDAGFHFSSNLARHCDPSKIICTTNLSH 840

Query: 841  SDVYDAALKDARKFWELSHPDETIISSGKNQIPWFDVKCILWFPRFASLKENLVIEKLLL 900
            SD+YDA+L DA+KFWELSHPDETIIS+G+NQIPW+DVKCILWFPRFAS KENL IEK+LL
Sbjct: 841  SDIYDASLNDAKKFWELSHPDETIISNGENQIPWYDVKCILWFPRFASSKENLDIEKILL 900

Query: 901  HNFFDLLAVRMLATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGEL 960
             NFFDLLA+R+LA ALHGV+VILTMNNIRFSQLQVEKLGRDSFF L+ESFPYDE+SFGEL
Sbjct: 901  QNFFDLLAIRILADALHGVQVILTMNNIRFSQLQVEKLGRDSFFFLSESFPYDERSFGEL 960

Query: 961  PDKVTTKKAMLTSRSISYVFVLQPPSAVQFGNYRMTLHRCLQDIE 1001
            PDK+TTKK MLTS+ +SYVF L+PPS+V FGNYR TL +CL D+E
Sbjct: 961  PDKLTTKKGMLTSKPVSYVFDLRPPSSVLFGNYRATLRQCLYDVE 1003

[Close]

BLAST of CmaCh01G003130 vs. ExPASy TrEMBL
Match: A0A0A0KV69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001760 PE=4 SV=1)

HSP 1 Score: 1730.3 bits (4480), Expect = 0.0e+00
Identity = 877/1006 (87.18%), Postives = 930/1006 (92.45%), Query Frame = 0


Query: 1    MASSSSSSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIP 60
            MASSSSSSSSSSS   S SP  FSALPVMSL+ERIVEKIR+NR+TLIVGETGCGKSSQIP
Sbjct: 1    MASSSSSSSSSSS---SPSPLVFSALPVMSLRERIVEKIRQNRVTLIVGETGCGKSSQIP 60

Query: 61   QFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKT 120
            QFLL+EDMGPILCTQPRRFAVVAIANMVARAR CNVGEEVGYHIGHSKHSSE+SKIVFKT
Sbjct: 61   QFLLEEDMGPILCTQPRRFAVVAIANMVARARKCNVGEEVGYHIGHSKHSSEKSKIVFKT 120

Query: 121  AGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATAD 180
            AGVLLEEMRDRGL AL+YKVIVLDEVHERSVESDLVLVCVKQFL K+HDLRVVLMSATAD
Sbjct: 121  AGVLLEEMRDRGLNALNYKVIVLDEVHERSVESDLVLVCVKQFLSKHHDLRVVLMSATAD 180

Query: 181  IGRYRDYFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSS---NGF 240
            IGRYRDYFK+LGRGERVEVLAIP+S+QK+FFE KVSYLEEV ELLGIESDLQSS   NGF
Sbjct: 181  IGRYRDYFKDLGRGERVEVLAIPNSNQKSFFERKVSYLEEVTELLGIESDLQSSRYCNGF 240

Query: 241  SSSTSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKV 300
            S   S  EIK EVH+LIHNLLLHIHKNESDIEKSIL+FLPTYYSLEQQWHLLKS SSFKV
Sbjct: 241  SPCASPAEIKSEVHRLIHNLLLHIHKNESDIEKSILVFLPTYYSLEQQWHLLKSHSSFKV 300

Query: 301  YILHSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQK 360
            YILHSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVID+CRSLQV+WDNNQK
Sbjct: 301  YILHSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDNNQK 360

Query: 361  KDSAQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLL 420
            KDS QVVWISKSQAEQRRGRTGRTCDGQVYRLV RSFYH FEDFERP ILRLSLRQQVLL
Sbjct: 361  KDSPQVVWISKSQAEQRRGRTGRTCDGQVYRLVTRSFYHNFEDFERPDILRLSLRQQVLL 420

Query: 421  ICSTESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLAS 480
            ICSTESKAINDP VLLQK LDPPD NVVEDAL+LLV M+ALK++PRGRYEPTYYGSLLAS
Sbjct: 421  ICSTESKAINDPAVLLQKTLDPPDANVVEDALSLLVNMQALKRSPRGRYEPTYYGSLLAS 480

Query: 481  FSLSFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESI 540
            FSLSFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESI
Sbjct: 481  FSLSFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESI 540

Query: 541  DTIPLGFKEMALIGNLHAFQFWERVYKDKIRVEYLNKLVKSDKIQATTSTPSKDEEEWCS 600
            DTI LGFKEMAL+GNLHAF FWERVYKDKIRVEYLNKLV  +K Q TTS PSK+EEEWCS
Sbjct: 541  DTIQLGFKEMALLGNLHAFHFWERVYKDKIRVEYLNKLVNPNKTQTTTSPPSKNEEEWCS 600

Query: 601  FHSLVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTP-QFQHSCILKCHENGVD 660
            FHSLVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCDILRSS  P QFQH C+LKC ENG D
Sbjct: 601  FHSLVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCDILRSSYAPTQFQHLCVLKCLENGDD 660

Query: 661  QSSESRTCASLPYVASSYPRTNHVAGKLADVIKQMKVIYGK-EPNNQSLSSLNNGFDVHD 720
            QSSESRTC S+PYVASSY RTN VAGKLADVIKQMKV Y K EPNN SLSS+NNGF+  +
Sbjct: 661  QSSESRTCVSVPYVASSYSRTNQVAGKLADVIKQMKVFYAKEEPNNHSLSSMNNGFN-DN 720

Query: 721  GTALCVYFVNGSCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGVSCFFSHDQSPSNSPS 780
            GT+LCVYF+NGSCNRG QCLFSHSLQS+RATCKFFFSLQGCRNG SC FSHDQSPS S S
Sbjct: 721  GTSLCVYFLNGSCNRGSQCLFSHSLQSKRATCKFFFSLQGCRNGDSCLFSHDQSPSKSLS 780

Query: 781  FKSTLCLPEDEKAHALTLEKYFPKSGGSILVMDDAGFHFSSNLARHCDPSKIICTTNLSR 840
            FKSTLCLPED  AHA TLEKYFPKSGG ILVMDDAGFHFSSNLARHC+PSKIICTTNLS 
Sbjct: 781  FKSTLCLPEDGIAHASTLEKYFPKSGGCILVMDDAGFHFSSNLARHCEPSKIICTTNLSH 840

Query: 841  SDVYDAALKDARKFWELSHPDETIISSGKNQIPWFDVKCILWFPRFASLKENLVIEKLLL 900
            SD+YD++L DA+K WELSHPDETIIS+G+NQIPW+DVKCILWFPRFAS KENL IEK+LL
Sbjct: 841  SDIYDSSLNDAKKIWELSHPDETIISNGENQIPWYDVKCILWFPRFASSKENLDIEKILL 900

Query: 901  HNFFDLLAVRMLATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGEL 960
             NFFDLLA+R+LA ALHGV+VILTMNNIRFSQLQVEKLGR+SFF L+ESFPYDE+SFGEL
Sbjct: 901  QNFFDLLAIRILADALHGVQVILTMNNIRFSQLQVEKLGRESFFFLSESFPYDERSFGEL 960

Query: 961  PDKVTTKKAMLTSRSISYVFVLQPPSAVQFGNYRMTLHRCLQDIER 1002
            PDK+TTKK MLTS+ +SYVF L+PPS+  FGNYR TL +CL ++ER
Sbjct: 961  PDKITTKKGMLTSKPVSYVFDLRPPSSALFGNYRATLRQCLYNVER 1002

[Close]

BLAST of CmaCh01G003130 vs. NCBI nr
Match: XP_022998526.1 (DExH-box ATP-dependent RNA helicase DExH8 isoform X2 [Cucurbita maxima])

HSP 1 Score: 2005.3 bits (5194), Expect = 0.0e+00
Identity = 1011/1011 (100.00%), Postives = 1011/1011 (100.00%), Query Frame = 0


Query: 1    MASSSSSSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIP 60
            MASSSSSSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIP
Sbjct: 1    MASSSSSSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIP 60

Query: 61   QFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKT 120
            QFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKT
Sbjct: 61   QFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKT 120

Query: 121  AGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATAD 180
            AGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATAD
Sbjct: 121  AGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATAD 180

Query: 181  IGRYRDYFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSS 240
            IGRYRDYFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSS
Sbjct: 181  IGRYRDYFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSS 240

Query: 241  TSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYIL 300
            TSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYIL
Sbjct: 241  TSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYIL 300

Query: 301  HSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDS 360
            HSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDS
Sbjct: 301  HSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDS 360

Query: 361  AQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICS 420
            AQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICS
Sbjct: 361  AQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICS 420

Query: 421  TESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSL 480
            TESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSL
Sbjct: 421  TESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSL 480

Query: 481  SFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTI 540
            SFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTI
Sbjct: 481  SFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTI 540

Query: 541  PLGFKEMALIGNLHAFQFWERVYKDKIRVEYLNKLVKSDKIQATTSTPSKDEEEWCSFHS 600
            PLGFKEMALIGNLHAFQFWERVYKDKIRVEYLNKLVKSDKIQATTSTPSKDEEEWCSFHS
Sbjct: 541  PLGFKEMALIGNLHAFQFWERVYKDKIRVEYLNKLVKSDKIQATTSTPSKDEEEWCSFHS 600

Query: 601  LVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHENGVDQSSE 660
            LVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHENGVDQSSE
Sbjct: 601  LVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHENGVDQSSE 660

Query: 661  SRTCASLPYVASSYPRTNHVAGKLADVIKQMKVIYGKEPNNQSLSSLNNGFDVHDGTALC 720
            SRTCASLPYVASSYPRTNHVAGKLADVIKQMKVIYGKEPNNQSLSSLNNGFDVHDGTALC
Sbjct: 661  SRTCASLPYVASSYPRTNHVAGKLADVIKQMKVIYGKEPNNQSLSSLNNGFDVHDGTALC 720

Query: 721  VYFVNGSCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGVSCFFSHDQSPSNSPSFKSTL 780
            VYFVNGSCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGVSCFFSHDQSPSNSPSFKSTL
Sbjct: 721  VYFVNGSCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGVSCFFSHDQSPSNSPSFKSTL 780

Query: 781  CLPEDEKAHALTLEKYFPKSGGSILVMDDAGFHFSSNLARHCDPSKIICTTNLSRSDVYD 840
            CLPEDEKAHALTLEKYFPKSGGSILVMDDAGFHFSSNLARHCDPSKIICTTNLSRSDVYD
Sbjct: 781  CLPEDEKAHALTLEKYFPKSGGSILVMDDAGFHFSSNLARHCDPSKIICTTNLSRSDVYD 840

Query: 841  AALKDARKFWELSHPDETIISSGKNQIPWFDVKCILWFPRFASLKENLVIEKLLLHNFFD 900
            AALKDARKFWELSHPDETIISSGKNQIPWFDVKCILWFPRFASLKENLVIEKLLLHNFFD
Sbjct: 841  AALKDARKFWELSHPDETIISSGKNQIPWFDVKCILWFPRFASLKENLVIEKLLLHNFFD 900

Query: 901  LLAVRMLATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGELPDKVT 960
            LLAVRMLATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGELPDKVT
Sbjct: 901  LLAVRMLATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGELPDKVT 960

Query: 961  TKKAMLTSRSISYVFVLQPPSAVQFGNYRMTLHRCLQDIERSNKEISLVRP 1012
            TKKAMLTSRSISYVFVLQPPSAVQFGNYRMTLHRCLQDIERSNKEISLVRP
Sbjct: 961  TKKAMLTSRSISYVFVLQPPSAVQFGNYRMTLHRCLQDIERSNKEISLVRP 1011

[Close]

BLAST of CmaCh01G003130 vs. NCBI nr
Match: XP_022998523.1 (DExH-box ATP-dependent RNA helicase DExH8 isoform X1 [Cucurbita maxima] >XP_022998524.1 DExH-box ATP-dependent RNA helicase DExH8 isoform X1 [Cucurbita maxima] >XP_022998525.1 DExH-box ATP-dependent RNA helicase DExH8 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1990.3 bits (5155), Expect = 0.0e+00
Identity = 1011/1039 (97.31%), Postives = 1011/1039 (97.31%), Query Frame = 0


Query: 1    MASSSSSSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIP 60
            MASSSSSSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIP
Sbjct: 1    MASSSSSSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIP 60

Query: 61   QFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKT 120
            QFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKT
Sbjct: 61   QFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKT 120

Query: 121  AGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATAD 180
            AGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATAD
Sbjct: 121  AGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATAD 180

Query: 181  IGRYRDYFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSS 240
            IGRYRDYFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSS
Sbjct: 181  IGRYRDYFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSS 240

Query: 241  TSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYIL 300
            TSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYIL
Sbjct: 241  TSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYIL 300

Query: 301  HSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDS 360
            HSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDS
Sbjct: 301  HSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDS 360

Query: 361  AQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICS 420
            AQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICS
Sbjct: 361  AQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICS 420

Query: 421  TESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSL 480
            TESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSL
Sbjct: 421  TESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSL 480

Query: 481  SFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNL----------------- 540
            SFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNL                 
Sbjct: 481  SFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLVFLDCYLLGFPYLTLAC 540

Query: 541  -----------YAEYIKSYFDGESIDTIPLGFKEMALIGNLHAFQFWERVYKDKIRVEYL 600
                       YAEYIKSYFDGESIDTIPLGFKEMALIGNLHAFQFWERVYKDKIRVEYL
Sbjct: 541  ILINFESYLIQYAEYIKSYFDGESIDTIPLGFKEMALIGNLHAFQFWERVYKDKIRVEYL 600

Query: 601  NKLVKSDKIQATTSTPSKDEEEWCSFHSLVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCD 660
            NKLVKSDKIQATTSTPSKDEEEWCSFHSLVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCD
Sbjct: 601  NKLVKSDKIQATTSTPSKDEEEWCSFHSLVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCD 660

Query: 661  ILRSSNTPQFQHSCILKCHENGVDQSSESRTCASLPYVASSYPRTNHVAGKLADVIKQMK 720
            ILRSSNTPQFQHSCILKCHENGVDQSSESRTCASLPYVASSYPRTNHVAGKLADVIKQMK
Sbjct: 661  ILRSSNTPQFQHSCILKCHENGVDQSSESRTCASLPYVASSYPRTNHVAGKLADVIKQMK 720

Query: 721  VIYGKEPNNQSLSSLNNGFDVHDGTALCVYFVNGSCNRGDQCLFSHSLQSRRATCKFFFS 780
            VIYGKEPNNQSLSSLNNGFDVHDGTALCVYFVNGSCNRGDQCLFSHSLQSRRATCKFFFS
Sbjct: 721  VIYGKEPNNQSLSSLNNGFDVHDGTALCVYFVNGSCNRGDQCLFSHSLQSRRATCKFFFS 780

Query: 781  LQGCRNGVSCFFSHDQSPSNSPSFKSTLCLPEDEKAHALTLEKYFPKSGGSILVMDDAGF 840
            LQGCRNGVSCFFSHDQSPSNSPSFKSTLCLPEDEKAHALTLEKYFPKSGGSILVMDDAGF
Sbjct: 781  LQGCRNGVSCFFSHDQSPSNSPSFKSTLCLPEDEKAHALTLEKYFPKSGGSILVMDDAGF 840

Query: 841  HFSSNLARHCDPSKIICTTNLSRSDVYDAALKDARKFWELSHPDETIISSGKNQIPWFDV 900
            HFSSNLARHCDPSKIICTTNLSRSDVYDAALKDARKFWELSHPDETIISSGKNQIPWFDV
Sbjct: 841  HFSSNLARHCDPSKIICTTNLSRSDVYDAALKDARKFWELSHPDETIISSGKNQIPWFDV 900

Query: 901  KCILWFPRFASLKENLVIEKLLLHNFFDLLAVRMLATALHGVRVILTMNNIRFSQLQVEK 960
            KCILWFPRFASLKENLVIEKLLLHNFFDLLAVRMLATALHGVRVILTMNNIRFSQLQVEK
Sbjct: 901  KCILWFPRFASLKENLVIEKLLLHNFFDLLAVRMLATALHGVRVILTMNNIRFSQLQVEK 960

Query: 961  LGRDSFFTLTESFPYDEKSFGELPDKVTTKKAMLTSRSISYVFVLQPPSAVQFGNYRMTL 1012
            LGRDSFFTLTESFPYDEKSFGELPDKVTTKKAMLTSRSISYVFVLQPPSAVQFGNYRMTL
Sbjct: 961  LGRDSFFTLTESFPYDEKSFGELPDKVTTKKAMLTSRSISYVFVLQPPSAVQFGNYRMTL 1020

[Close]

BLAST of CmaCh01G003130 vs. NCBI nr
Match: XP_022949129.1 (LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH8 [Cucurbita moschata])

HSP 1 Score: 1966.0 bits (5092), Expect = 0.0e+00
Identity = 988/1005 (98.31%), Postives = 995/1005 (99.00%), Query Frame = 0


Query: 7    SSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIPQFLLDE 66
            +SSSSSST LSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIPQFLLDE
Sbjct: 2    ASSSSSSTLLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIPQFLLDE 61

Query: 67   DMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKTAGVLLE 126
            DMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKI+FKTAGVLLE
Sbjct: 62   DMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIIFKTAGVLLE 121

Query: 127  EMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATADIGRYRD 186
            EMRDRGLKALDYKVIVLDEVHERS ESDLVLVCVKQFLLKNHDLRVVLMSATADIGRYRD
Sbjct: 122  EMRDRGLKALDYKVIVLDEVHERSAESDLVLVCVKQFLLKNHDLRVVLMSATADIGRYRD 181

Query: 187  YFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSSTSSVEI 246
            YFKELGRGERVEVLAIPSSSQKTFFE KVSYLEEVNELLGIESDLQSSNGFS STSSVEI
Sbjct: 182  YFKELGRGERVEVLAIPSSSQKTFFERKVSYLEEVNELLGIESDLQSSNGFSPSTSSVEI 241

Query: 247  KPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYILHSSIDI 306
            KPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSL+SFKVYILHSSIDI
Sbjct: 242  KPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLNSFKVYILHSSIDI 301

Query: 307  EQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDSAQVVWI 366
            EQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVID+CRSLQVFWDNNQKKDSAQVVWI
Sbjct: 302  EQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDNNQKKDSAQVVWI 361

Query: 367  SKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICSTESKAI 426
            SKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICSTESKAI
Sbjct: 362  SKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICSTESKAI 421

Query: 427  NDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSLSFDSSV 486
            NDPTVLLQKALDPPDGNVVEDALNLLVRMKALK+TPRGRYEPTYYGSLLASFSLSFDSSV
Sbjct: 422  NDPTVLLQKALDPPDGNVVEDALNLLVRMKALKRTPRGRYEPTYYGSLLASFSLSFDSSV 481

Query: 487  LILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTIPLGFKE 546
            LILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTIPLGFKE
Sbjct: 482  LILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTIPLGFKE 541

Query: 547  MALIGNLHAFQFWERVYKDKIRVEYLNKLVKSDKIQATTSTPSKDEEEWCSFHSLVHSSL 606
            MALIGNLHAFQFWERVYKDKIRVEYLNKLVKSD+IQATTSTPSKDEEEWCSFHSLVHSSL
Sbjct: 542  MALIGNLHAFQFWERVYKDKIRVEYLNKLVKSDEIQATTSTPSKDEEEWCSFHSLVHSSL 601

Query: 607  NHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHENGVDQSSESRTCAS 666
            NHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHENGVDQSSESRTCAS
Sbjct: 602  NHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHENGVDQSSESRTCAS 661

Query: 667  LPYVASSYPRTNHVAGKLADVIKQMKVIYGKEPNNQSLSSLNNGFDVHDGTALCVYFVNG 726
            LPYVASSYPRTNHVAGKLADVIKQMKVIYGKEPNNQSLSSL+NGFDVHDGTALCVYFVNG
Sbjct: 662  LPYVASSYPRTNHVAGKLADVIKQMKVIYGKEPNNQSLSSLDNGFDVHDGTALCVYFVNG 721

Query: 727  SCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGVSCFFSHDQSPSNSPSFKSTLCLPEDE 786
            SCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNG SCFFSHDQSPSNSPSFKSTLCLPEDE
Sbjct: 722  SCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGDSCFFSHDQSPSNSPSFKSTLCLPEDE 781

Query: 787  KAHALTLEKYFPKSGGSILVMDDAGFHFSSNLARHCDPSKIICTTNLSRSDVYDAALKDA 846
            KAHALTLEKYFPKSGGSILVMDDAGFHFSSNLARHCDPSKIICTTNLSRSDVYDAALKDA
Sbjct: 782  KAHALTLEKYFPKSGGSILVMDDAGFHFSSNLARHCDPSKIICTTNLSRSDVYDAALKDA 841

Query: 847  RKFWELSHPDETIISSGKNQIPWFDVKCILWFPRFASLKENLVIEKLLLHNFFDLLAVRM 906
            RKFWELSHPDETIISSGKNQIPWFDVKCILWFPRFAS KENLVIEKLLL NFFDLLAVRM
Sbjct: 842  RKFWELSHPDETIISSGKNQIPWFDVKCILWFPRFASSKENLVIEKLLLQNFFDLLAVRM 901

Query: 907  LATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGELPDKVTTKKAML 966
            LATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGELPDKVTTKKAML
Sbjct: 902  LATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGELPDKVTTKKAML 961

Query: 967  TSRSISYVFVLQPPSAVQFGNYRMTLHRCLQDIERSNKEISLVRP 1012
             SR ISYVFVLQPPSAVQFGNYRMTLHRCLQDIER NKEISLVRP
Sbjct: 962  MSRPISYVFVLQPPSAVQFGNYRMTLHRCLQDIERCNKEISLVRP 1006

[Close]

BLAST of CmaCh01G003130 vs. NCBI nr
Match: KAG7036665.1 (DExH-box ATP-dependent RNA helicase DExH8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1961.4 bits (5080), Expect = 0.0e+00
Identity = 994/1012 (98.22%), Postives = 999/1012 (98.72%), Query Frame = 0


Query: 1    MASSSSSSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIP 60
            MASSSSSSSSSSST LSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIP
Sbjct: 1    MASSSSSSSSSSSTLLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIP 60

Query: 61   QFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKT 120
            QFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKT
Sbjct: 61   QFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKT 120

Query: 121  AGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATAD 180
            AGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATAD
Sbjct: 121  AGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATAD 180

Query: 181  IGRYRDYFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSS 240
            IGRYRDYFKELGRGERVEVLAIPSSSQKTFFE KVSYLEEVNELLGIESDLQSSNGFS S
Sbjct: 181  IGRYRDYFKELGRGERVEVLAIPSSSQKTFFERKVSYLEEVNELLGIESDLQSSNGFSPS 240

Query: 241  TSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYIL 300
            TSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYIL
Sbjct: 241  TSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYIL 300

Query: 301  HSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDS 360
            HSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVID+CRSLQVFWDNNQKKDS
Sbjct: 301  HSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDNNQKKDS 360

Query: 361  AQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICS 420
            AQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICS
Sbjct: 361  AQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICS 420

Query: 421  TESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSL 480
            TESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSL
Sbjct: 421  TESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSL 480

Query: 481  SFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTI 540
            SFDSSVLILKFGDIGMLH GILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTI
Sbjct: 481  SFDSSVLILKFGDIGMLHVGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTI 540

Query: 541  PLGFKEMALIGNLHAFQFWERVYKDKIRVEYLNKLVKSDKIQATTSTPSKDEEEWCSFHS 600
            PLGFKEMALIGNLHAFQFWERVYKDKIRVEYLNKLVKSD+IQATTSTPSKDEEEWCSFHS
Sbjct: 541  PLGFKEMALIGNLHAFQFWERVYKDKIRVEYLNKLVKSDEIQATTSTPSKDEEEWCSFHS 600

Query: 601  LVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHENGVDQSSE 660
            LVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHENGVDQSSE
Sbjct: 601  LVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHENGVDQSSE 660

Query: 661  SRTCASLPYVASSYPRTNHVAGKLADVIKQMKVIYGKEPNNQSLSSLNNGFDVHDGTALC 720
            SRTCASLPYVASSYP TNHVAGKLADVIKQMKVIYGKEPNNQSLSSLNNGFDVHDGTALC
Sbjct: 661  SRTCASLPYVASSYPLTNHVAGKLADVIKQMKVIYGKEPNNQSLSSLNNGFDVHDGTALC 720

Query: 721  VYFVNGSCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGVSCFFSHDQSPSNSPSFKSTL 780
            VYFVNGSCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNG SCFFSHDQSPSNSPSF+STL
Sbjct: 721  VYFVNGSCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGDSCFFSHDQSPSNSPSFESTL 780

Query: 781  CLPEDEKAHALTLEKYFPKSGGSILVMDDAGFHFSSNLARHCDPSKIICTTNLSRSDVYD 840
            CLPEDEKAHALTLEKYFPKSGG ILVMDDAGFHFSSNLARHCDPSKIICTTNLSRSDVYD
Sbjct: 781  CLPEDEKAHALTLEKYFPKSGGCILVMDDAGFHFSSNLARHCDPSKIICTTNLSRSDVYD 840

Query: 841  AALKDARKFWELSHPDETIISSGKNQIPWFDVKCILWFPRFASLKENLVIEKLLLHNFFD 900
            AALKDARKFWELSHPDETIISSGKNQIPWFDVKCILWFPRFAS KENLVIEKLLL NFFD
Sbjct: 841  AALKDARKFWELSHPDETIISSGKNQIPWFDVKCILWFPRFASSKENLVIEKLLLQNFFD 900

Query: 901  LLAVRMLATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGELPDKVT 960
            LLAVRMLATALHGVRVILTMNNIRFSQL+VEKLGRDSFFTLTESFPYDEKSFGELPDKVT
Sbjct: 901  LLAVRMLATALHGVRVILTMNNIRFSQLRVEKLGRDSFFTLTESFPYDEKSFGELPDKVT 960

Query: 961  TKKAMLTSRSISYVFVLQPPSAVQFGNYRMTLHRCLQDIE-RSNKEISLVRP 1012
            TKKAML SR ISYVFVLQPPSAVQFGNYRMTLHRCLQ+IE RSNKEIS VRP
Sbjct: 961  TKKAMLMSRPISYVFVLQPPSAVQFGNYRMTLHRCLQNIEGRSNKEISPVRP 1012

[Close]

BLAST of CmaCh01G003130 vs. NCBI nr
Match: XP_023525192.1 (DExH-box ATP-dependent RNA helicase DExH8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1959.5 bits (5075), Expect = 0.0e+00
Identity = 987/1005 (98.21%), Postives = 994/1005 (98.91%), Query Frame = 0


Query: 8    SSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIPQFLLDED 67
            +SSSSST LSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIPQFLLDED
Sbjct: 2    ASSSSSTLLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIPQFLLDED 61

Query: 68   MGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKTAGVLLEE 127
            MGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKTAGVLLEE
Sbjct: 62   MGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKTAGVLLEE 121

Query: 128  MRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATADIGRYRDY 187
            MRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATADIGRYRDY
Sbjct: 122  MRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATADIGRYRDY 181

Query: 188  FKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSSTSSVEIK 247
            FKE+GRGERVEVLAIPSSSQKTFFE KVSYLEEVNELLGIESDLQSSNGFS STSSVEIK
Sbjct: 182  FKEIGRGERVEVLAIPSSSQKTFFERKVSYLEEVNELLGIESDLQSSNGFSPSTSSVEIK 241

Query: 248  PEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYILHSSIDIE 307
            PEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYILHSSIDIE
Sbjct: 242  PEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKSLSSFKVYILHSSIDIE 301

Query: 308  QALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDSAQVVWIS 367
            QALTAMRIWKSHRKVILATNIAESSVTIPKVAYVID+CRSLQVFWDNNQKKDSAQVVWIS
Sbjct: 302  QALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDNNQKKDSAQVVWIS 361

Query: 368  KSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICSTESKAIN 427
            KSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICSTESKAIN
Sbjct: 362  KSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLICSTESKAIN 421

Query: 428  DPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSLSFDSSVL 487
            DPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSLSFDSSVL
Sbjct: 422  DPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASFSLSFDSSVL 481

Query: 488  ILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTIPLGFKEM 547
            ILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTIPLGFKEM
Sbjct: 482  ILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESIDTIPLGFKEM 541

Query: 548  ALIGNLHAFQFWERVYKDKIRVEYLNKLVKSDKIQATTSTPSKDEEEWCSFHSLVHSSLN 607
            ALIGNLHAFQFWERVYKDKIRVEYLNKLVKSD+IQATTSTPSKDEEEWCSFHSLVHSSLN
Sbjct: 542  ALIGNLHAFQFWERVYKDKIRVEYLNKLVKSDEIQATTSTPSKDEEEWCSFHSLVHSSLN 601

Query: 608  HVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHENGVDQSSESRTCASL 667
            HVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHENGVDQSSESRTCASL
Sbjct: 602  HVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTPQFQHSCILKCHENGVDQSSESRTCASL 661

Query: 668  PYVASSYPRTNHVAGKLADVIKQMKVIYGKEPNNQSLSSLNNGFDVHDGTALCVYFVNGS 727
            PYVASSYPRTNHVAGKLADVIKQMKVIYG+EPNNQSLSSLNN FDVHDGTALCVYFVNGS
Sbjct: 662  PYVASSYPRTNHVAGKLADVIKQMKVIYGEEPNNQSLSSLNNDFDVHDGTALCVYFVNGS 721

Query: 728  CNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGVSCFFSHDQSPSNSPSFKSTLCLPEDEK 787
            CNRGDQCLFSHSLQSRRATCKFFFSLQGCRNG SCFFSHDQSPSNSPSF+STLCLPEDEK
Sbjct: 722  CNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGDSCFFSHDQSPSNSPSFESTLCLPEDEK 781

Query: 788  AHALTLEKYFPKSGGSILVMDDAGFHFSSNLARHCDPSKIICTTNLSRSDVYDAALKDAR 847
            AHALTLEKYFPKSGG ILVMDDAGFHFSSNLARHCDPSKIICTTN+SRSDVYDAALKDAR
Sbjct: 782  AHALTLEKYFPKSGGYILVMDDAGFHFSSNLARHCDPSKIICTTNISRSDVYDAALKDAR 841

Query: 848  KFWELSHPDETIISSGKNQIPWFDVKCILWFPRFASLKENLVIEKLLLHNFFDLLAVRML 907
            KFWELSHPDETIISSGKNQIPWFDVKCILWFPRFAS KENLVIEKLLL NFFDLLAVRML
Sbjct: 842  KFWELSHPDETIISSGKNQIPWFDVKCILWFPRFASSKENLVIEKLLLQNFFDLLAVRML 901

Query: 908  ATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGELPDKVTTKKAMLT 967
            ATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGELPDKVTTKKAML 
Sbjct: 902  ATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLTESFPYDEKSFGELPDKVTTKKAMLM 961

Query: 968  SRSISYVFVLQPPSAVQFGNYRMTLHRCLQDIE-RSNKEISLVRP 1012
            SR ISYVFVLQPPSAVQFGNYRMTLHRCLQDIE RSNKEISLVRP
Sbjct: 962  SRPISYVFVLQPPSAVQFGNYRMTLHRCLQDIEGRSNKEISLVRP 1006

[Close]

BLAST of CmaCh01G003130 vs. TAIR 10
Match: AT2G47680.1 (zinc finger (CCCH type) helicase family protein )

HSP 1 Score: 1105.1 bits (2857), Expect = 0.0e+00
Identity = 576/1016 (56.69%), Postives = 746/1016 (73.43%), Query Frame = 0


Query: 1    MASSSSSSSSSSSTSLSSSPFDFSALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIP 60
            MA SS +SSSSSS SL     +F++LP+M++K RI++KI +NR+TLIVGE GCGKSSQ+P
Sbjct: 1    MAVSSPTSSSSSSESLPLPSSNFASLPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVP 60

Query: 61   QFLLDEDMGPILCTQPRRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKT 120
            QFLL+ +M PILCTQPRRFAVVA+A MVA++RN ++G E+GYHIGHSK  +E SKI+FKT
Sbjct: 61   QFLLEANMAPILCTQPRRFAVVAVAKMVAKSRNSDLGGEIGYHIGHSKILTEGSKILFKT 120

Query: 121  AGVLLEEMRDRGLKALDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATAD 180
            AGVLL+EM D+GL AL YKVI+LDEVHERSVESDLVLVCVKQFL+KN+DLRVVLMSATAD
Sbjct: 121  AGVLLDEMLDKGLNALKYKVIILDEVHERSVESDLVLVCVKQFLMKNNDLRVVLMSATAD 180

Query: 181  IGRYRDYFKELGRGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQS-SNGFSS 240
            I RYRDYFKELGRGERVEV+AIPS  Q+T F+ +V YLE+V  LLG+ SDL +   G S 
Sbjct: 181  ITRYRDYFKELGRGERVEVVAIPSPDQRTIFQRRVLYLEQVAGLLGVSSDLSAYCPGPSP 240

Query: 241  STSSVEIKPEVHKLIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQWHLLKS-LSSFKVY 300
            S++  EIKPE+  LIH+L+L+IH+ E DIEKSIL+FLPTYYSLEQQ+H L+   +SF+V+
Sbjct: 241  SSADTEIKPELQNLIHDLILYIHEKEPDIEKSILVFLPTYYSLEQQYHQLEPFFASFEVH 300

Query: 301  ILHSSIDIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVIDTCRSLQVFWDNNQKK 360
            ILH SID EQAL AM+I +S RKVILATNIAESSVTIPKVAYVID+CRSLQVFWD ++K+
Sbjct: 301  ILHRSIDTEQALAAMKICRSRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKR 360

Query: 361  DSAQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFERPAILRLSLRQQVLLI 420
            D+ Q+VW+S+SQAEQRRGRTGRTCDG+VYRLVP +F++K E+ E P+IL+LSLRQQVL I
Sbjct: 361  DAVQLVWVSRSQAEQRRGRTGRTCDGEVYRLVPSAFFNKLEEHEPPSILKLSLRQQVLHI 420

Query: 421  CSTESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKALKKTPRGRYEPTYYGSLLASF 480
            C TES+AIND   LL KA+DPPD +VV+DAL +L+ ++AL+K+PRGRYEPT+YG LLASF
Sbjct: 421  CCTESRAINDANALLAKAMDPPDPDVVDDALRMLLSIQALRKSPRGRYEPTFYGRLLASF 480

Query: 481  SLSFDSSVLILKFGDIGMLHEGILLGILMDTQPLPVLRPFGENNLYAEYIKSYFDGESID 540
             LSFD+S+L++KFG++GML +GILLG+LMDT PLP+  PFG+++L+ EY+  YF G    
Sbjct: 481  PLSFDASILVVKFGEMGMLRQGILLGVLMDTLPLPIHHPFGDDSLFLEYVDHYFGGSK-- 540

Query: 541  TIPLGFKEMALIGNLHAFQFWERVYKDKIRVEYLNKLVKSDKIQATTSTPSKDEEEWCSF 600
            TI  G +EM L+ N  AFQFW+RV+KDK R+E L +L+  +K +       + E+EWC F
Sbjct: 541  TISGGRREMVLMANFCAFQFWQRVFKDKHRLENLKQLLSKEKDKDLKLMFPEIEKEWCDF 600

Query: 601  HSLVHSSLNHVSEMYEDIIHTLHQFRPRFLGMCDILRSSNTP-QFQHSCILKC------- 660
            H++  SS  HVSE+YED + + H+FRP+F+   D   +   P +F H+C ++C       
Sbjct: 601  HNIAQSSFYHVSELYEDTLSSFHRFRPQFISSSDSQPTYYNPYEFDHTCYIECQPSEDKY 660

Query: 661  -HENGVDQSS---ESRTCASLPYVASSYPRTNHVAGKLADVIKQMKVIYGKEPNNQSLSS 720
             H   VD +    E R C S+P+V  +  + N +A  +A +IK+++       ++    +
Sbjct: 661  LHSEDVDNNQPPPEVRKCVSVPFVPPNAFQANAIAENMASIIKEIRTQCTPSESDNGHGA 720

Query: 721  LNNGFDVHDGTA-LCVYFVNGSCNRGDQCLFSHSLQSRRATCKFFFSLQGCRNGVSCFFS 780
            L     V  G A +CVYF+NG CNRG QC F+H+LQS R  CKFF S QGCRNG SC FS
Sbjct: 721  LEPEDYVEYGEAPVCVYFLNGYCNRGGQCTFTHTLQSTRPACKFFASSQGCRNGESCLFS 780

Query: 781  HDQSPSNSPSFKSTLCLPEDEKAHALTLEKYFPKSG-GSILVMDDAGFHFSSNLARHCDP 840
            H      +       CLPE++ +    L   FP S  G ILV DD+  HF+S++A     
Sbjct: 781  HAMRRRTTSYLPPPQCLPEEDGSSTSPLLDLFPTSSEGCILVFDDSDMHFTSSIANRYPS 840

Query: 841  SKIICTTNLSRSDVYDAALKDARKFWELSHPDETIISSG--KNQIPWFDVKCILWFPRFA 900
             +I+ T++ S +   D++L D R FW L+HP +TIIS    +N IPW +VKC+LWF    
Sbjct: 841  WRILSTSSSSETLFCDSSLADTRIFWGLNHPYQTIISKAGRENPIPWNEVKCVLWFLNPD 900

Query: 901  SLKENLVIEKLLLHNFFDLLAVRMLATALHGVRVILTMNNIRFSQLQVEKLGRDSFFTLT 960
            S  +    +K +L NFF+ +A+R+L   L+ +RV+LTMNN+RFS LQVEKL R+SFF L 
Sbjct: 901  SYADTPEKQKTILQNFFEHMAIRLLGDKLYKIRVVLTMNNVRFSLLQVEKLARESFFFLG 960

Query: 961  ESFPYDEKSFGELPDKVTTKKAMLTSRSISYVFVLQPPSAVQFGNYRMTLHRCLQD 999
            ESFP+D +SFG   D +T +K ML SR ISYVF L PPS +QFGNY   L + L +
Sbjct: 961  ESFPHDSESFGAFQDTLTIQKPMLVSRPISYVFNLHPPSDIQFGNYTSLLRKSLHN 1014

[Close]

BLAST of CmaCh01G003130 vs. TAIR 10
Match: AT2G35920.1 (RNA helicase family protein )

HSP 1 Score: 213.0 bits (541), Expect = 1.1e-54
Identity = 152/488 (31.15%), Postives = 248/488 (50.82%), Query Frame = 0


Query: 26  LPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIPQFLLDEDMGP-------ILCTQPRR 85
           LP   +KE  +  + +N++ ++ GETGCGK++Q+PQF+L+E++         I+CTQPRR
Sbjct: 228 LPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQPRR 287

Query: 86  FAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKTAGVLLEEM-RDRGLKALD 145
            + +++A+ ++  R  ++GE VGY I      S++++++F T GVLL  +  D  L  + 
Sbjct: 288 ISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLTNVS 347

Query: 146 YKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATADIGRYRDYFKEL------ 205
           +  +++DE+HER +  D +L+ ++  L +  DLR++LMSAT +   +  YF         
Sbjct: 348 H--LLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIP 407

Query: 206 GRGERVEVLAIPSSSQKTFFECKVS---------------YLEEVNELLGIESDLQSSNG 265
           G    V  L +    +K+ +  K S                  + ++L  +  D+  ++ 
Sbjct: 408 GFTFPVAELFLEDVLEKSRYNIKSSDSGNYQGSSRGRRRESESKKDDLTTLFEDIDINSH 467

Query: 266 FSSSTSSVEIKPEVHK-------LIHNLLLHIHKNESDIEKSILIFLPTYYSLEQ----- 325
           + S +S+     E          L+   + HI + E     +IL+FL  +  + +     
Sbjct: 468 YKSYSSATRNSLEAWSGAQIDVDLVEATIEHICRLEGG--GAILVFLTGWDEISKLLEKI 527

Query: 326 -QWHLLKSLSSFKVYILHSSI-DIEQALTAMRIWKSHRKVILATNIAESSVTIPKVAYVI 385
              + L   S F V  LH S+  + Q     R   + RK++LATNIAESS+TI  V YV+
Sbjct: 528 NMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVV 587

Query: 386 DTCRSLQVFWDNNQKKDSAQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKFEDFE 445
           D  ++ +  +D   K       WISK+ A QRRGR GR   G  YRL P+  Y  F  ++
Sbjct: 588 DCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQ 647

Query: 446 RPAILRLSLRQQVLLICSTESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKAL---- 467
            P I+R  L++  L I S +  +I      L KAL PPD   VE+A+ LL  + AL    
Sbjct: 648 LPEIIRTPLQELCLHIKSLQVGSIGS---FLAKALQPPDALAVENAIELLKTIGALNDVE 707

[Close]

BLAST of CmaCh01G003130 vs. TAIR 10
Match: AT1G48650.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 199.1 bits (505), Expect = 1.7e-50
Identity = 149/491 (30.35%), Postives = 241/491 (49.08%), Query Frame = 0


Query: 26  LPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIPQFLLDEDMG-------PILCTQPRR 85
           LP    K+ +++ I  N++ ++ GETGCGK++Q+PQ++L+ ++         I+CTQPRR
Sbjct: 299 LPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRR 358

Query: 86  FAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKTAGVLLEEMR-DRGLKALD 145
            + ++++  VA  R   +GE VGY +         ++++F T GVLL  +  DR LK + 
Sbjct: 359 ISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVT 418

Query: 146 YKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATADIGRYRDYFKELG----- 205
           +  +V+DE+HER +  D +L+ +K  L +  DL+++LMSAT +   +  YF         
Sbjct: 419 H--VVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIP 478

Query: 206 ------RGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSSTSSVEI 265
                 R   +E     S  + T +     Y EE    +  ++  +      SS     +
Sbjct: 479 GFTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQAQFKKRKSLISSAVEDAL 538

Query: 266 KPEVHK---------------------LIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQ 325
           +    K                     LI N+L HI K E     ++L+F+  +  +   
Sbjct: 539 EAADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGER--PGAVLVFMTGWDDINSL 598

Query: 326 WHLLKSLSSF----KVYIL--HSSI-DIEQALTAMRIWKSHRKVILATNIAESSVTIPKV 385
            + L++ S      KV +L  H S+   EQ L   R  +  RK++LATN+AE+S+TI  V
Sbjct: 599 KNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDV 658

Query: 386 AYVIDTCRSLQVFWDNNQKKDSAQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKF 445
            YVID  ++ +  +D           WISK+ A QRRGR GR   G+ Y L PR  Y  F
Sbjct: 659 VYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAF 718

Query: 446 EDFERPAILRLSLRQQVLLICSTESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKAL 466
            D+++P +LR  L+   L I S    +I++    L +AL PP+   V++A+  L  + AL
Sbjct: 719 ADYQQPELLRTPLQSLCLQIKSLGLGSISE---FLSRALQPPEALSVQNAVEYLKIIGAL 778

[Close]

BLAST of CmaCh01G003130 vs. TAIR 10
Match: AT1G48650.2 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 199.1 bits (505), Expect = 1.7e-50
Identity = 149/491 (30.35%), Postives = 241/491 (49.08%), Query Frame = 0


Query: 26  LPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIPQFLLDEDMG-------PILCTQPRR 85
           LP    K+ +++ I  N++ ++ GETGCGK++Q+PQ++L+ ++         I+CTQPRR
Sbjct: 299 LPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRR 358

Query: 86  FAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKTAGVLLEEMR-DRGLKALD 145
            + ++++  VA  R   +GE VGY +         ++++F T GVLL  +  DR LK + 
Sbjct: 359 ISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVT 418

Query: 146 YKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATADIGRYRDYFKELG----- 205
           +  +V+DE+HER +  D +L+ +K  L +  DL+++LMSAT +   +  YF         
Sbjct: 419 H--VVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIP 478

Query: 206 ------RGERVEVLAIPSSSQKTFFECKVSYLEEVNELLGIESDLQSSNGFSSSTSSVEI 265
                 R   +E     S  + T +     Y EE    +  ++  +      SS     +
Sbjct: 479 GFTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQAQFKKRKSLISSAVEDAL 538

Query: 266 KPEVHK---------------------LIHNLLLHIHKNESDIEKSILIFLPTYYSLEQQ 325
           +    K                     LI N+L HI K E     ++L+F+  +  +   
Sbjct: 539 EAADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGER--PGAVLVFMTGWDDINSL 598

Query: 326 WHLLKSLSSF----KVYIL--HSSI-DIEQALTAMRIWKSHRKVILATNIAESSVTIPKV 385
            + L++ S      KV +L  H S+   EQ L   R  +  RK++LATN+AE+S+TI  V
Sbjct: 599 KNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDV 658

Query: 386 AYVIDTCRSLQVFWDNNQKKDSAQVVWISKSQAEQRRGRTGRTCDGQVYRLVPRSFYHKF 445
            YVID  ++ +  +D           WISK+ A QRRGR GR   G+ Y L PR  Y  F
Sbjct: 659 VYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAF 718

Query: 446 EDFERPAILRLSLRQQVLLICSTESKAINDPTVLLQKALDPPDGNVVEDALNLLVRMKAL 466
            D+++P +LR  L+   L I S    +I++    L +AL PP+   V++A+  L  + AL
Sbjct: 719 ADYQQPELLRTPLQSLCLQIKSLGLGSISE---FLSRALQPPEALSVQNAVEYLKIIGAL 778

[Close]

BLAST of CmaCh01G003130 vs. TAIR 10
Match: AT2G01130.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 195.3 bits (495), Expect = 2.4e-49
Identity = 166/604 (27.48%), Postives = 281/604 (46.52%), Query Frame = 0


Query: 24  SALPVMSLKERIVEKIRKNRITLIVGETGCGKSSQIPQFLLDEDM-------GPILCTQP 83
           ++LP    +  ++  I +N++ +I GETGCGK++QIPQF+L+ ++         I+CTQP
Sbjct: 218 TSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQP 277

Query: 84  RRFAVVAIANMVARARNCNVGEEVGYHIGHSKHSSERSKIVFKTAGVLLEEMR-DRGLKA 143
           RR + ++++  VA  R   +GE VGY +         ++++F T G+LL  +  DR L+ 
Sbjct: 278 RRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLRG 337

Query: 144 LDYKVIVLDEVHERSVESDLVLVCVKQFLLKNHDLRVVLMSATADIGRYRDYFKELGRGE 203
           + +  +++DE+HER +  D +L+ +K  L +  +L+++LMSAT D   +  YF   G   
Sbjct: 338 VTH--VIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGGAG--- 397

Query: 204 RVEVLAIPSSSQKTFFECKVSYLEEVNEL-------------LGIESDLQSSNGFSSSTS 263
              V+ IP  +    +  +  +LE++ E+              G E   + +        
Sbjct: 398 ---VIYIPGFT----YPVRSHFLEDILEMTRYRLTPYNQIDDYGQERTWKMNKQIPKKRK 457

Query: 264 S---------------VEIKPEVHK-------------LIHNLLLHIHKNESDIEKSILI 323
           S                E  PE  +             LI  LL +I +NE      ILI
Sbjct: 458 SQITFVVEDALRAADFKEFSPETRESLSCWYPDCIGFNLIEFLLCNICENEG--PGGILI 517

Query: 324 FLPTY---YSLEQQWHLLKSLSSFKVYIL---HSSID-IEQALTAMRIWKSHRKVILATN 383
           FL  +    SL+++  +     +  + +L   H S++  EQ L         RK++LATN
Sbjct: 518 FLTGWDDISSLKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEPASGVRKIVLATN 577

Query: 384 IAESSVTIPKVAYVIDTCRSLQVFWDNNQKKDSAQVVWISKSQAEQRRGRTGRTCDGQVY 443
           IAE+S+TI  VA+VID  ++ +  +D           WISK  A+QRRGR GR   GQ Y
Sbjct: 578 IAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVRPGQCY 637

Query: 444 RLVPRSFYHKFEDFERPAILRLSLRQQVLLICSTESKAINDPTVLLQKALDPPDGNVVED 503
            L P+  Y  F +++ P ILR  L    L I S    +I++    L +AL  P+   V+ 
Sbjct: 638 HLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKSLNLGSISE---FLSRALQSPELLAVQK 697

Query: 504 ALNLLVRMKALKKTPRGRYEPTYYGSLLASFSLSFDSSVLILKFGDIGMLHEGILLGILM 563
           A+  L  + AL +      + T  G  L+   +      +++    +G L   + +   +
Sbjct: 698 AIAFLKIIGALDENE----DLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILTVAAGL 757

Query: 564 DTQPLPVLRPFGENNLYAEYIKSYFDGESIDTIPLGFKEMALIGNLHAFQFWERVYKDKI 572
             +  P L P  + +L AE  KS F  +  D + L          + A++ W++  ++  
Sbjct: 758 SVRD-PFLTPQDKKDL-AEAAKSQFSRDHSDHLAL----------VRAYEGWKKAEEESA 788

The following BLAST results are available for this feature:

BLAST of CmaCh01G003130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22243	0.0e+00	56.69	DExH-box ATP-dependent RNA helicase DExH8 OS=Arabidopsis thaliana OX=3702 GN=At2...	[more]
Q1EHT7	1.2e-282	51.75	Zinc finger CCCH domain-containing protein 4 OS=Oryza sativa subsp. japonica OX=...	[more]
Q6PGC1	5.4e-62	30.53	ATP-dependent RNA helicase DHX29 OS=Mus musculus OX=10090 GN=Dhx29 PE=1 SV=1	[more]
Q16JS8	1.2e-61	31.56	Probable ATP-dependent RNA helicase spindle-E OS=Aedes aegypti OX=7159 GN=spn-E ...	[more]
Q7Z478	3.3e-59	31.55	ATP-dependent RNA helicase DHX29 OS=Homo sapiens OX=9606 GN=DHX29 PE=1 SV=2	[more]

BLAST of CmaCh01G003130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KAE9	0.0e+00	100.00	DExH-box ATP-dependent RNA helicase DExH8 isoform X2 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1KEJ9	0.0e+00	97.31	DExH-box ATP-dependent RNA helicase DExH8 isoform X1 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1GBX6	0.0e+00	98.31	LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH8 OS=Cucurbita mosc...	[more]
A0A1S3BZ58	0.0e+00	87.86	DExH-box ATP-dependent RNA helicase DExH8 isoform X1 OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0KV69	0.0e+00	87.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001760 PE=4 SV=1	[more]

BLAST of CmaCh01G003130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022998526.1	0.0e+00	100.00	DExH-box ATP-dependent RNA helicase DExH8 isoform X2 [Cucurbita maxima]	[more]
XP_022998523.1	0.0e+00	97.31	DExH-box ATP-dependent RNA helicase DExH8 isoform X1 [Cucurbita maxima] >XP_0229...	[more]
XP_022949129.1	0.0e+00	98.31	LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH8 [Cucurbita moscha...	[more]
KAG7036665.1	0.0e+00	98.22	DExH-box ATP-dependent RNA helicase DExH8 [Cucurbita argyrosperma subsp. argyros...	[more]
XP_023525192.1	0.0e+00	98.21	DExH-box ATP-dependent RNA helicase DExH8 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh01G003130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47680.1	0.0e+00	56.69	zinc finger (CCCH type) helicase family protein	[more]
AT2G35920.1	1.1e-54	31.15	RNA helicase family protein	[more]
AT1G48650.1	1.7e-50	30.35	DEA(D/H)-box RNA helicase family protein	[more]
AT1G48650.2	1.7e-50	30.35	DEA(D/H)-box RNA helicase family protein	[more]
AT2G01130.1	2.4e-49	27.48	DEA(D/H)-box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 24..211 e-value: 2.8E-19 score: 80.0
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 36..197 score: 19.355455
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 714..740 e-value: 4.5E-7 score: 39.5 coord: 742..768 e-value: 0.21 score: 20.7
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 716..739 e-value: 8.3E-5 score: 22.4
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 715..741 score: 14.548975
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 742..769 score: 11.957583
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 283..382 e-value: 1.6E-15 score: 67.6
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 258..381 e-value: 6.8E-15 score: 55.4
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 253..438 score: 13.855086
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 34..180 e-value: 2.9E-6 score: 27.2
None	No IPR available	GENE3D	4.10.1000.10		coord: 712..779 e-value: 1.0E-11 score: 46.5
None	No IPR available	PANTHER	PTHR18934:SF238	SUBFAMILY NOT NAMED	coord: 24..987
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 24..987
None	No IPR available	CDD	cd18791	SF2_C_RHA	coord: 211..390 e-value: 3.23028E-45 score: 158.466
None	No IPR available	CDD	cd17917	DEXHc_RHA-like	coord: 42..188 e-value: 1.10949E-61 score: 205.005
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 241..400 e-value: 8.4E-38 score: 131.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 2..204 e-value: 2.2E-59 score: 202.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 39..393
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 716..739

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G003130.1	CmaCh01G003130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding