CmaCh01G002400 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGAGGCTTTGGATTTTGATTTGGATTTGGATTTGGAAATGGGTCTCTCTATCCATGGAATGTGGAGATGATAAGAAGTGGAAATGGTGACACAAATTTGTTTGGATTGCTACAAATTTTGTGGCCATTAATTTTGCTCTTTATTTTTTTTCTCTCTTTTTTTTTTTAATAAATATTATTTATATTGTTGTCTAAATAAAATTTTATTTGAAGATAAATTTATTGTCTTGTTCATTTATTATATTTAAATTTTAAAATATAAAAAATAATACAATATTTGTATGAATATTAAGTTATATTTAAATTTTAAAAATAGGATAATACCGAAGTTTTATTTGAATATAAATTGTGGTGGAAATATAAATTTTAGTCCACATTCTAGTGGGTTCCTCTTTAAATTATTTTATTTTATTTTATTTTAGGGGAAAAAAATACAAATAGAAGTCTATTTCTCTCAATATTACTTTGAATAATTTTAGTAAATAAAAATCAATAAAAAAATATATTTTAATGCATTAGTGTTGGTTTATTTAGCATTGGAATTTCTTAAATTTAATAAAATCTTTATTTTGTGACAAGACAGGTGTACAACAACTAGTGGTGCATATCGAATCGAATATACACGTGTGTGGCCTAGATATCTCGAAGGTGACGTGGATTGCTGTCGTGTCGTGCCAACCTTTTATTTTTTCTTTTACGTTTTTAGTAATTTTAGAATGGCCAAATTATAAAATATTACATTCAAATATTCGCCTTTGCCAGATTTCAAGTTTGTGGGCTAGAGATTTGGGCTTGACTTTGGGCTGGGCTTTTAGCTAAAATAGGCTTGGTTGGTATATGGGCCGGCCCAATTTGGTAAACTATTAAATTATATAAAATTAATTTTCAAGCTTTGGCAAAACACACACTATATAAAGGATTATGTGACATTTTAGGATATCATTTTGCTTACATTTTATAAAATTAAATGGATTGAATATTTAAAATAAGCTTCTTTTAAACTTAGTTCGTTATGATTCATTCGATATGCATTTTGTTCGGTCCTTGATCATCAAAGATAATACTTCTCTTTTACTGTATTTCTTTGAATTTATATTTAGGTGTCGTTATGTGAGATCCCACGTCGGTTGGAGAGAGAAACTAAGTATTCCTTATAAGTGTGTGAAAATTTCTCCTCAGTTTACACGTTTTTTAAATTTTGGAGCTGATGACTATATGTAATGAGGCAAAGCAGACAATATTTATTAGCAAGGGACTTCACTGTTACAAAAGATAGACTTAAGTTGTTACAAATGACATCAGAGAGAGATAGATACTACACAATGTGCCAACAAGAACGTTGGTCCCAAGAAAGAGTATATTGTGAGATCTCACATCAGTTGGAAAGGGAACTAAACATTCTTATAAAGGTGGGAAAATAAAAATCGTGAGACTGACAATGAAACGTAACGTGCCAAAGAAAACAACCGCTTGAGCTGTTACATGTTATGAGTGTATCGGAGGCTCGTAAAGCTAAAAGAAAGTTGAACGTCCGTTTACAATGGAGTTAGTACCACTTTCCAAAGGTACTTTTATTAGGGAATTAAAAAAAAAGACTTATCTTTTCAAAAGGATAAGCAATTAGTTGGACCTATCCATCCACCTATGTTATTAAAGCTGTTGTTAGGTTTAGCTTCTTAATTAATTATTTAATTTGTTAATAATAATTTTGATAATTATAATTGCTAGTTAATAATATCCATTATGTGAAATTTCATAAAATTCAGTGCATTAAAATCCACCGAATCTTTTATCGTTTTTGGAAGAGAGTTGTTGAGTATTAATCTGTTTGAACTGAACACGTTGTTTGATCTTCCATTGTAAGCTTCCGATCGCAGAAAAATCTCTGTTCATATCCCGTTGATGCTTTCTTTCTCGTGACAGCTTCACAAGCTCACGCAAGATCGTTCCCACTTGGGCTGGCCCAGTTGCTCAAATTCTGTGAATTCCTAATTTAGATAACCCCATTTGACCGTTGATTCAGAGTCACAAGCCCTCCAGATTTGATCTGCGAAGTTTGCTTCGGCAAATCGCCTTTTAAAGTTCTTCCCTAGCTGGTCAATTCAATCGCGGAGTTCTGTTCTTGATCTTTTGATGCTCATTTCTGTTCATCAATTGGCAGATTATTCTCCAAACTGGAAGATCTTCACGACCACCGCCATCATGAATCGGAAACGGCGTTATCGGCGGCGATTCAGGGATTTCTCTCTGCAATCTCGATTTCCTTGAGCGATTTGGGGTTTGATTCGAACAAATCCACATCCGAAATTCTCTCATTTCCATGGATCAATCGGTGTTTCCAACTGCTTCGTATTCAACACAGAGCTTTTGCCAAGTTGATCGCAGAAATTGACTATCCAGTTCGCAAACTCGAGGCTTCTTCAGGGGAGGGGTTTTTTCAATACACCTTGCGATTACTTGAGCTTTTGAATTCGATTAGCTCGTGTATAGCTGATCTGAGTCAAGCTCGGTTAGGGCTTTCTCATGCGTTAACCTTAGTGGAACCTTCTCCTTCTTCTGCAATCGATCGTTTGAAGCCTATAGGAACAAGCAGTTTCAAGAACAGCTCGATCAAAGGCGAAATCGGAGAGATTTCTGTGGAAGTCAAGAATTCAGAGAAAGAATCCGTGGTTAATCGTGCTTTGACGATTATGAAACAGATTGGTTCATGGGTTTGCGGGCTTGTAATTTCTGGATTGAGCGGAGAAGTTGAAGTATTCATGGAGATGAGAAGATCAACAGGGAAATTAGGGGTTTCTGCTTTGGATCGATTGGATTTTACTGTTCATAAAGCAATTTGTGAATCTGGCGCGAGGTTGAAGGAAGTTCAAGAGGTGAATGATGCAGTTGAGCTTCTAGCTGCTTCCATGGCGGATCAGAAAAGCAGCGGTGAAGCCGCTGAGAATTTGCAGAAGAAATTAGCGGTTCTTGAGAAGGAGACAGATGATTTCAAGAAGGAAGTTGATTCTCTCTTCTCTGATGTTTTGGAAGAGAGAACCAAACTGCTTAATTCCCTGAGACGAACATATCAATAG ATGCAGAGGCTTTGGATTTTGATTTGGATTTGGATTTGGAAATGGGTCTCTCTATCCATGGAATGTGGAGATGATAAGAAGTGGAAATGCTTCACAAGCTCACGCAAGATCGTTCCCACTTGGGCTGGCCCAGTTGCTCAAATTCTATTATTCTCCAAACTGGAAGATCTTCACGACCACCGCCATCATGAATCGGAAACGGCGTTATCGGCGGCGATTCAGGGATTTCTCTCTGCAATCTCGATTTCCTTGAGCGATTTGGGGTTTGATTCGAACAAATCCACATCCGAAATTCTCTCATTTCCATGGATCAATCGGTGTTTCCAACTGCTTCGTATTCAACACAGAGCTTTTGCCAAGTTGATCGCAGAAATTGACTATCCAGTTCGCAAACTCGAGGCTTCTTCAGGGGAGGGGTTTTTTCAATACACCTTGCGATTACTTGAGCTTTTGAATTCGATTAGCTCGTGTATAGCTGATCTGAGTCAAGCTCGGTTAGGGCTTTCTCATGCGTTAACCTTAGTGGAACCTTCTCCTTCTTCTGCAATCGATCGTTTGAAGCCTATAGGAACAAGCAGTTTCAAGAACAGCTCGATCAAAGGCGAAATCGGAGAGATTTCTGTGGAAGTCAAGAATTCAGAGAAAGAATCCGTGGTTAATCGTGCTTTGACGATTATGAAACAGATTGGTTCATGGGTTTGCGGGCTTGTAATTTCTGGATTGAGCGGAGAAGTTGAAGTATTCATGGAGATGAGAAGATCAACAGGGAAATTAGGGGTTTCTGCTTTGGATCGATTGGATTTTACTGTTCATAAAGCAATTTGTGAATCTGGCGCGAGGTTGAAGGAAGTTCAAGAGGTGAATGATGCAGTTGAGCTTCTAGCTGCTTCCATGGCGGATCAGAAAAGCAGCGGTGAAGCCGCTGAGAATTTGCAGAAGAAATTAGCGGTTCTTGAGAAGGAGACAGATGATTTCAAGAAGGAAGTTGATTCTCTCTTCTCTGATGTTTTGGAAGAGAGAACCAAACTGCTTAATTCCCTGAGACGAACATATCAATAG ATGCAGAGGCTTTGGATTTTGATTTGGATTTGGATTTGGAAATGGGTCTCTCTATCCATGGAATGTGGAGATGATAAGAAGTGGAAATGCTTCACAAGCTCACGCAAGATCGTTCCCACTTGGGCTGGCCCAGTTGCTCAAATTCTATTATTCTCCAAACTGGAAGATCTTCACGACCACCGCCATCATGAATCGGAAACGGCGTTATCGGCGGCGATTCAGGGATTTCTCTCTGCAATCTCGATTTCCTTGAGCGATTTGGGGTTTGATTCGAACAAATCCACATCCGAAATTCTCTCATTTCCATGGATCAATCGGTGTTTCCAACTGCTTCGTATTCAACACAGAGCTTTTGCCAAGTTGATCGCAGAAATTGACTATCCAGTTCGCAAACTCGAGGCTTCTTCAGGGGAGGGGTTTTTTCAATACACCTTGCGATTACTTGAGCTTTTGAATTCGATTAGCTCGTGTATAGCTGATCTGAGTCAAGCTCGGTTAGGGCTTTCTCATGCGTTAACCTTAGTGGAACCTTCTCCTTCTTCTGCAATCGATCGTTTGAAGCCTATAGGAACAAGCAGTTTCAAGAACAGCTCGATCAAAGGCGAAATCGGAGAGATTTCTGTGGAAGTCAAGAATTCAGAGAAAGAATCCGTGGTTAATCGTGCTTTGACGATTATGAAACAGATTGGTTCATGGGTTTGCGGGCTTGTAATTTCTGGATTGAGCGGAGAAGTTGAAGTATTCATGGAGATGAGAAGATCAACAGGGAAATTAGGGGTTTCTGCTTTGGATCGATTGGATTTTACTGTTCATAAAGCAATTTGTGAATCTGGCGCGAGGTTGAAGGAAGTTCAAGAGGTGAATGATGCAGTTGAGCTTCTAGCTGCTTCCATGGCGGATCAGAAAAGCAGCGGTGAAGCCGCTGAGAATTTGCAGAAGAAATTAGCGGTTCTTGAGAAGGAGACAGATGATTTCAAGAAGGAAGTTGATTCTCTCTTCTCTGATGTTTTGGAAGAGAGAACCAAACTGCTTAATTCCCTGAGACGAACATATCAATAG MQRLWILIWIWIWKWVSLSMECGDDKKWKCFTSSRKIVPTWAGPVAQILLFSKLEDLHDHRHHESETALSAAIQGFLSAISISLSDLGFDSNKSTSEILSFPWINRCFQLLRIQHRAFAKLIAEIDYPVRKLEASSGEGFFQYTLRLLELLNSISSCIADLSQARLGLSHALTLVEPSPSSAIDRLKPIGTSSFKNSSIKGEIGEISVEVKNSEKESVVNRALTIMKQIGSWVCGLVISGLSGEVEVFMEMRRSTGKLGVSALDRLDFTVHKAICESGARLKEVQEVNDAVELLAASMADQKSSGEAAENLQKKLAVLEKETDDFKKEVDSLFSDVLEERTKLLNSLRRTYQ Homology
BLAST of CmaCh01G002400 vs. ExPASy Swiss-Prot
Match: Q9LMM6 (Protein BPS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BPS1 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 2.2e-07 Identity = 70/276 (25.36%), Postives = 118/276 (42.75%), Query Frame = 0
BLAST of CmaCh01G002400 vs. ExPASy TrEMBL
Match: A0A5D3BNK7 (Protein BPS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold474G00170 PE=4 SV=1) HSP 1 Score: 380.9 bits (977), Expect = 5.6e-102 Identity = 208/279 (74.55%), Postives = 235/279 (84.23%), Query Frame = 0
BLAST of CmaCh01G002400 vs. ExPASy TrEMBL
Match: A0A0A0LD05 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G686210 PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 1.1e-97 Identity = 203/281 (72.24%), Postives = 233/281 (82.92%), Query Frame = 0
BLAST of CmaCh01G002400 vs. ExPASy TrEMBL
Match: A0A6J1DI81 (uncharacterized protein LOC111020287 OS=Momordica charantia OX=3673 GN=LOC111020287 PE=4 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 2.4e-97 Identity = 205/303 (67.66%), Postives = 241/303 (79.54%), Query Frame = 0
BLAST of CmaCh01G002400 vs. ExPASy TrEMBL
Match: A0A7J7HIQ8 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_010399 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 5.8e-59 Identity = 140/299 (46.82%), Postives = 199/299 (66.56%), Query Frame = 0
BLAST of CmaCh01G002400 vs. ExPASy TrEMBL
Match: A0A7N2LBL5 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 5.8e-59 Identity = 143/309 (46.28%), Postives = 201/309 (65.05%), Query Frame = 0
BLAST of CmaCh01G002400 vs. NCBI nr
Match: KAG6606891.1 (Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 562.4 bits (1448), Expect = 2.8e-156 Identity = 310/352 (88.07%), Postives = 315/352 (89.49%), Query Frame = 0
BLAST of CmaCh01G002400 vs. NCBI nr
Match: KAG7036596.1 (Protein BPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 528.9 bits (1361), Expect = 3.4e-146 Identity = 285/303 (94.06%), Postives = 290/303 (95.71%), Query Frame = 0
BLAST of CmaCh01G002400 vs. NCBI nr
Match: XP_038905091.1 (uncharacterized protein LOC120091232 [Benincasa hispida] >XP_038905092.1 uncharacterized protein LOC120091232 [Benincasa hispida] >XP_038905093.1 uncharacterized protein LOC120091232 [Benincasa hispida] >XP_038905094.1 uncharacterized protein LOC120091232 [Benincasa hispida] >XP_038905095.1 uncharacterized protein LOC120091232 [Benincasa hispida]) HSP 1 Score: 402.1 bits (1032), Expect = 4.8e-108 Identity = 224/304 (73.68%), Postives = 249/304 (81.91%), Query Frame = 0
BLAST of CmaCh01G002400 vs. NCBI nr
Match: KAA0048399.1 (protein BPS1 [Cucumis melo var. makuwa] >TYJ99875.1 protein BPS1 [Cucumis melo var. makuwa]) HSP 1 Score: 380.9 bits (977), Expect = 1.2e-101 Identity = 208/279 (74.55%), Postives = 235/279 (84.23%), Query Frame = 0
BLAST of CmaCh01G002400 vs. NCBI nr
Match: XP_022152601.1 (uncharacterized protein LOC111020287 [Momordica charantia]) HSP 1 Score: 365.5 bits (937), Expect = 5.0e-97 Identity = 205/303 (67.66%), Postives = 241/303 (79.54%), Query Frame = 0
BLAST of CmaCh01G002400 vs. TAIR 10
Match: AT1G01550.1 (Protein of unknown function (DUF793) ) HSP 1 Score: 58.2 bits (139), Expect = 1.6e-08 Identity = 70/276 (25.36%), Postives = 118/276 (42.75%), Query Frame = 0
BLAST of CmaCh01G002400 vs. TAIR 10
Match: AT1G01550.2 (Protein of unknown function (DUF793) ) HSP 1 Score: 58.2 bits (139), Expect = 1.6e-08 Identity = 70/276 (25.36%), Postives = 118/276 (42.75%), Query Frame = 0
BLAST of CmaCh01G002400 vs. TAIR 10
Match: AT2G46080.1 (CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.9 bits (115), Expect = 9.7e-06 Identity = 66/280 (23.57%), Postives = 117/280 (41.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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