CmaCh01G002110 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G002110
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	60S ribosomal protein L6
Location	Cma_Chr01: 964876 .. 966930 (+)
RNA-Seq Expression	CmaCh01G002110
Synteny	CmaCh01G002110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCACTTTAGGGCTCCATATTGAATATATATGTGCCTCCATCTCTTAAATCTCAGGGTTTCGGCGAAGAGGAGAGGAGACGATAACGAGATCTCAGAGAAGGAATTCATCAATGGCTCCGAAGGCAGCGAGAACTAGCAGGAACCCTGATCTCATTCGTGGGGTTGGGAAATATTCGAGGTCGAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGCGAAAAATGGAGGTGTCTTCCCTCGCCACGATGCCAAGCCTCAGGCCGACGCGCCGGCAGAGAAGCCGCCGAAGTTTTACCCTGCTGACGATGTCAAGAAGCCACTTGTCAACAAGCGCAAGGCTAAGCCCACCAAACTTAGGTCTATCTCTCTCAGTGTCTTTCTTTTGATGTTTACTGCAGTGCCTTGGAACGTATATTGTTTGGTGTATTTTGACTTTTTTATGGTTCCGAAACTGAGGAATTTGGAATCAACTAAGAAACAATTGCGTTAATTACATGAAATCACAAAATGAATGGGGCAGTGTCACTCCCTATTAGACTGAATAGAGTTCATGCTGTAGCTATGAAAAAGGGGGATTTGAAACTTTTAGGTTTCCAGATTTGAAATTTGTTGAAGTCTGAACTGCGTGTAGTGAAGTAATGTTGCTCATTTTCCAAATAATAAACATGGGGGTCAGTTCAAAGAAATGTGCGTCGGGTGATTTCATATAACATAGTTTGTCAATTTCATATCATTTGCAGGTCTAGCATTACTCCTGGAACCGTGCTTATCATTCTCGCTGGAAGGTTCAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTAGTCACTGGTGAGTATTGGCAATTTTCTCTAATCGCCTTCCTTTGTAATTTTTCTGTAATATCGCTATCTGTTCATGTGGTAATGAGCTTTTTTTTCCTACATTCATTTTGGATTTGCATTAGTTCTGCATTGTAAGCTTCGTTTATTGTATTTTTGTCATTTTAAAATCCGTCCGCCTTACGTTTACGTATTATCTTCAATGTGTTGTGTGCATTACTTTTTCTATTGACAAGTAAGAAGTATTGGGACGTCGTATGCCTCCATTTCTGTCTAATATACCCTGCAATTACATACCCCTTCAATGTCTCATGCCTCCTATTCTGACTATATGTTGTGCAAATTTTCTTTACATACCTTAGACCTTTAAGCTTCATTTGGTGTTGAAACAAAGAGAGTTTCTAAGCTTCATTTGGCGGTTGTGGGTTGGGGAGGTGTTGGTCTAGATGATGCAGACTGTAGTGATAGTGATAGATGTTTGGGAGAAAGGGTGCATATAAAGTAGTGATTGGCTAAGTCTTTGATTTTTGAATTTGCAATTTTCGAACCTACAAGGGATTATCTTAATGTAAAGTTTGCTTTTTTAGGACCATTCAAGGTCAATGGTGTTCCGTTGAGGCGTGTGAATCAGTCATATGTGATTGCAACCTCCACCAAGGTAGACATTGCCGGAGTCAACGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTTAAGATGAAGAAAAAGAAGGGAGAAGGAGAGTTCTTTGAGGCAGAGAAGGAGGTTCGTAGTTATTTTCTATAATGTTTTGTTTTTTCAAATACTTCAATTTTTCTCACTTTCTTGTCTTAATTTCTGGTCACCATTGCTTACATGTAGGAAAAAAGTGCTCTCCCACAGGACAAAAAGGATGATCAGAAGGCCGTGGACTCAGCTTTGCTCAAGTCGATCGAGGCTGTTTCAGATTTAAAGACATACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAACCGCATGAGCTTGTTTTCTAGATATTTGCAGTTTTCTTGTGGAATTGGTCGCTACAATTTTCTTGTTTTGTGTTTTGTTATGAGGATTCTAGATTTGAAATTATATCCCGTTATGAATTTTGACTGATAGTGATAAGATATGTAATATTTCTTCTATTCCCATCACTTTACTTACGCATACTTACAAAGTAATCGAGAGGAATCATTTGAAAA

mRNA sequence

TTCACTTTAGGGCTCCATATTGAATATATATGTGCCTCCATCTCTTAAATCTCAGGGTTTCGGCGAAGAGGAGAGGAGACGATAACGAGATCTCAGAGAAGGAATTCATCAATGGCTCCGAAGGCAGCGAGAACTAGCAGGAACCCTGATCTCATTCGTGGGGTTGGGAAATATTCGAGGTCGAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGCGAAAAATGGAGGTGTCTTCCCTCGCCACGATGCCAAGCCTCAGGCCGACGCGCCGGCAGAGAAGCCGCCGAAGTTTTACCCTGCTGACGATGTCAAGAAGCCACTTGTCAACAAGCGCAAGGCTAAGCCCACCAAACTTAGGTCTAGCATTACTCCTGGAACCGTGCTTATCATTCTCGCTGGAAGGTTCAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTAGTCACTGGACCATTCAAGGTCAATGGTGTTCCGTTGAGGCGTGTGAATCAGTCATATGTGATTGCAACCTCCACCAAGGTAGACATTGCCGGAGTCAACGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTTAAGATGAAGAAAAAGAAGGGAGAAGGAGAGTTCTTTGAGGCAGAGAAGGAGGAAAAAAGTGCTCTCCCACAGGACAAAAAGGATGATCAGAAGGCCGTGGACTCAGCTTTGCTCAAGTCGATCGAGGCTGTTTCAGATTTAAAGACATACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAACCGCATGAGCTTGTTTTCTAGATATTTGCAGTTTTCTTGTGGAATTGGTCGCTACAATTTTCTTGTTTTGTGTTTTGTTATGAGGATTCTAGATTTGAAATTATATCCCGTTATGAATTTTGACTGATAGTGATAAGATATGTAATATTTCTTCTATTCCCATCACTTTACTTACGCATACTTACAAAGTAATCGAGAGGAATCATTTGAAAA

Coding sequence (CDS)

ATGGCTCCGAAGGCAGCGAGAACTAGCAGGAACCCTGATCTCATTCGTGGGGTTGGGAAATATTCGAGGTCGAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGCGAAAAATGGAGGTGTCTTCCCTCGCCACGATGCCAAGCCTCAGGCCGACGCGCCGGCAGAGAAGCCGCCGAAGTTTTACCCTGCTGACGATGTCAAGAAGCCACTTGTCAACAAGCGCAAGGCTAAGCCCACCAAACTTAGGTCTAGCATTACTCCTGGAACCGTGCTTATCATTCTCGCTGGAAGGTTCAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTAGTCACTGGACCATTCAAGGTCAATGGTGTTCCGTTGAGGCGTGTGAATCAGTCATATGTGATTGCAACCTCCACCAAGGTAGACATTGCCGGAGTCAACGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTTAAGATGAAGAAAAAGAAGGGAGAAGGAGAGTTCTTTGAGGCAGAGAAGGAGGAAAAAAGTGCTCTCCCACAGGACAAAAAGGATGATCAGAAGGCCGTGGACTCAGCTTTGCTCAAGTCGATCGAGGCTGTTTCAGATTTAAAGACATACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAACCGCATGAGCTTGTTTTCTAG

Protein sequence

MAPKAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

Homology

[Close]

BLAST of CmaCh01G002110 vs. ExPASy Swiss-Prot
Match: Q9C9C6 (60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 1.7e-101
Identity = 187/228 (82.02%), Postives = 206/228 (90.35%), Query Frame = 0


Query: 4   KAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPPKFY 63
           + A+ +RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK + DAP EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKP KLR+SITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  + KKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of CmaCh01G002110 vs. ExPASy Swiss-Prot
Match: Q9C9C5 (60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 3.0e-101
Identity = 187/228 (82.02%), Postives = 206/228 (90.35%), Query Frame = 0


Query: 4   KAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPPKFY 63
           +  + +RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK + DAP EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKPTKLR+SITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  + KKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of CmaCh01G002110 vs. ExPASy Swiss-Prot
Match: Q9FZ76 (60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 3.9e-101
Identity = 185/230 (80.43%), Postives = 206/230 (89.57%), Query Frame = 0


Query: 2   APKAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPPK 61
           A +  + +RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+P+ DAP EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK KPTKL++SITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKEE 181
           FK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKFDDKYF K  + KKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           K  +PQ+KK+DQK VD+AL+KSIEAV +LK YL ARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

[Close]

BLAST of CmaCh01G002110 vs. ExPASy Swiss-Prot
Match: P34091 (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 5.6e-100
Identity = 186/223 (83.41%), Postives = 201/223 (90.13%), Query Frame = 0


Query: 9   SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPPKFYPADDV 68
           SRNP+L+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K       EKPPKFYPADDV
Sbjct: 12  SRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFYPADDV 71

Query: 69  KKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVP 128
           KKPL+NKRK KPTKLR+SITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFKVNGVP
Sbjct: 72  KKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGVP 131

Query: 129 LRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKEEKSALPQD 188
           LRRVNQ+YVIATSTKVDI+GVNVEKFDDKYF K+ + K KKGEGEFFEAEK+E + LPQ+
Sbjct: 132 LRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQE 191

Query: 189 KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           KKDDQKAVD ALLK+IE V +LK YL ARFSLKAGMKPHELVF
Sbjct: 192 KKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234

[Close]

BLAST of CmaCh01G002110 vs. ExPASy Swiss-Prot
Match: Q2YGT9 (60S ribosomal protein L6 OS=Sus scrofa OX=9823 GN=RPL6 PE=1 SV=3)

HSP 1 Score: 187.2 bits (474), Expect = 2.1e-46
Identity = 117/246 (47.56%), Postives = 154/246 (62.60%), Query Frame = 0


Query: 9   SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKP--------- 68
           SRNP L+RG+G+YSRS MY ++ L+  K            K +  A   KP         
Sbjct: 41  SRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKSKVEKKKKVRVLATVTKPVGGDKNGGT 100

Query: 69  --------PKFYPADDVKKPLVNKRKAKP-----TKLRSSITPGTVLIILAGRFKGKRVV 128
                   P++YP +DV + L++  K KP      KLR+SITPGT+LIIL GR +GKRV+
Sbjct: 101 RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSKHVRKLRASITPGTILIILTGRHRGKRVI 160

Query: 129 FLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNV-EKFDDKYFSKEVKM 188
           FLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTK+DI+GV + E   D YF K+   
Sbjct: 161 FLKQLSSGLLLVTGPLSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDAYFKKKKLR 220

Query: 189 KKKKGEGEFFEAEKEEKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMK 232
           K +  EGE F+ EK EK  + + +K DQKAVDS +L+ I+AV  L+ YL + F+L  G+ 
Sbjct: 221 KPRHQEGEIFDTEK-EKYEISEQRKVDQKAVDSQILRRIKAVPQLQGYLRSVFALTNGIY 280

[Close]

BLAST of CmaCh01G002110 vs. ExPASy TrEMBL
Match: A0A6J1KGX0 (60S ribosomal protein L6 OS=Cucurbita maxima OX=3661 GN=LOC111493107 PE=3 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.7e-121
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MAPKAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPP 60
           MAPKAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPP
Sbjct: 1   MAPKAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of CmaCh01G002110 vs. ExPASy TrEMBL
Match: A0A6J1GC93 (60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111452826 PE=3 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.9e-119
Identity = 228/231 (98.70%), Postives = 229/231 (99.13%), Query Frame = 0


Query: 1   MAPKAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPP 60
           MAPKAAR SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEK P
Sbjct: 1   MAPKAARASRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKAP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKS+LPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSSLPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of CmaCh01G002110 vs. ExPASy TrEMBL
Match: A0A6J1F5G0 (60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111442321 PE=3 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.2e-116
Identity = 221/231 (95.67%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MAPKAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPP 60
           MAPK AR SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+P+ DAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIIL GRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEV+ KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLK+GMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKSGMKPHELVF 231

[Close]

BLAST of CmaCh01G002110 vs. ExPASy TrEMBL
Match: A0A0A0L9J7 (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.0e-116
Identity = 221/231 (95.67%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MAPKAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPP 60
           MAPK AR SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKP+A+APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKP+VNKRKAKPTKLRSSITPGTVLIIL GRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKFDDKYFSKEV+ KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of CmaCh01G002110 vs. ExPASy TrEMBL
Match: A0A5D3CKB9 (60S ribosomal protein L6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00210 PE=3 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 7.6e-116
Identity = 220/231 (95.24%), Postives = 224/231 (96.97%), Query Frame = 0


Query: 1   MAPKAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPP 60
           MAPK AR SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKP+ +APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSKEV+ KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQK VDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKTVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of CmaCh01G002110 vs. NCBI nr
Match: XP_022998493.1 (60S ribosomal protein L6-2-like [Cucurbita maxima])

HSP 1 Score: 444.5 bits (1142), Expect = 5.6e-121
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MAPKAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPP 60
           MAPKAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPP
Sbjct: 1   MAPKAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of CmaCh01G002110 vs. NCBI nr
Match: XP_022949498.1 (60S ribosomal protein L6-2-like [Cucurbita moschata] >KAG7036570.1 60S ribosomal protein L6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 438.3 bits (1126), Expect = 4.0e-119
Identity = 228/231 (98.70%), Postives = 229/231 (99.13%), Query Frame = 0


Query: 1   MAPKAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPP 60
           MAPKAAR SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEK P
Sbjct: 1   MAPKAARASRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKAP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKS+LPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSSLPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of CmaCh01G002110 vs. NCBI nr
Match: XP_023525962.1 (60S ribosomal protein L6-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 434.5 bits (1116), Expect = 5.8e-118
Identity = 227/231 (98.27%), Postives = 228/231 (98.70%), Query Frame = 0


Query: 1   MAPKAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPP 60
           MAPKAAR SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAK QADAPAEK P
Sbjct: 1   MAPKAARASRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLQADAPAEKAP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKS+LPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSSLPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of CmaCh01G002110 vs. NCBI nr
Match: KAG6606864.1 (60S ribosomal protein L6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 433.3 bits (1113), Expect = 1.3e-117
Identity = 226/231 (97.84%), Postives = 228/231 (98.70%), Query Frame = 0


Query: 1   MAPKAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPP 60
           MAPKAAR SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQAD+ AEK P
Sbjct: 1   MAPKAARASRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADSLAEKAP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKS+LPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSSLPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of CmaCh01G002110 vs. NCBI nr
Match: XP_023528566.1 (60S ribosomal protein L6-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 430.6 bits (1106), Expect = 8.3e-117
Identity = 222/231 (96.10%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 1   MAPKAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPP 60
           MAPKAAR SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+P+ DAPAEKPP
Sbjct: 1   MAPKAARASRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIIL GRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEV+ KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLK+GMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKSGMKPHELVF 231

[Close]

BLAST of CmaCh01G002110 vs. TAIR 10
Match: AT1G74060.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 370.2 bits (949), Expect = 1.2e-102
Identity = 187/228 (82.02%), Postives = 206/228 (90.35%), Query Frame = 0


Query: 4   KAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPPKFY 63
           + A+ +RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK + DAP EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKP KLR+SITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  + KKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of CmaCh01G002110 vs. TAIR 10
Match: AT1G74050.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 369.4 bits (947), Expect = 2.1e-102
Identity = 187/228 (82.02%), Postives = 206/228 (90.35%), Query Frame = 0


Query: 4   KAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPPKFY 63
           +  + +RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK + DAP EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKPTKLR+SITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  + KKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of CmaCh01G002110 vs. TAIR 10
Match: AT1G18540.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 369.0 bits (946), Expect = 2.8e-102
Identity = 185/230 (80.43%), Postives = 206/230 (89.57%), Query Frame = 0


Query: 2   APKAARTSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPQADAPAEKPPK 61
           A +  + +RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+P+ DAP EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK KPTKL++SITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVKMKKKKGEGEFFEAEKEE 181
           FK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKFDDKYF K  + KKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           K  +PQ+KK+DQK VD+AL+KSIEAV +LK YL ARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

The following BLAST results are available for this feature:

BLAST of CmaCh01G002110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9C6	1.7e-101	82.02	60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1	[more]
Q9C9C5	3.0e-101	82.02	60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1	[more]
Q9FZ76	3.9e-101	80.43	60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1	[more]
P34091	5.6e-100	83.41	60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 S...	[more]
Q2YGT9	2.1e-46	47.56	60S ribosomal protein L6 OS=Sus scrofa OX=9823 GN=RPL6 PE=1 SV=3	[more]

BLAST of CmaCh01G002110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KGX0	2.7e-121	100.00	60S ribosomal protein L6 OS=Cucurbita maxima OX=3661 GN=LOC111493107 PE=3 SV=1	[more]
A0A6J1GC93	1.9e-119	98.70	60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111452826 PE=3 SV=1	[more]
A0A6J1F5G0	1.2e-116	95.67	60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111442321 PE=3 SV=1	[more]
A0A0A0L9J7	2.0e-116	95.67	60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1	[more]
A0A5D3CKB9	7.6e-116	95.24	60S ribosomal protein L6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of CmaCh01G002110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022998493.1	5.6e-121	100.00	60S ribosomal protein L6-2-like [Cucurbita maxima]	[more]
XP_022949498.1	4.0e-119	98.70	60S ribosomal protein L6-2-like [Cucurbita moschata] >KAG7036570.1 60S ribosomal...	[more]
XP_023525962.1	5.8e-118	98.27	60S ribosomal protein L6-2-like [Cucurbita pepo subsp. pepo]	[more]
KAG6606864.1	1.3e-117	97.84	60S ribosomal protein L6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023528566.1	8.3e-117	96.10	60S ribosomal protein L6-1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh01G002110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74060.1	1.2e-102	82.02	Ribosomal protein L6 family protein	[more]
AT1G74050.1	2.1e-102	82.02	Ribosomal protein L6 family protein	[more]
AT1G18540.1	2.8e-102	80.43	Ribosomal protein L6 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005568	Ribosomal protein L6, N-terminal	PFAM	PF03868	Ribosomal_L6e_N	coord: 7..59 e-value: 2.1E-15 score: 56.7
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 85..169 e-value: 3.0E-17 score: 64.4
IPR000915	60S ribosomal protein L6E	PFAM	PF01159	Ribosomal_L6e	coord: 124..231 e-value: 2.7E-39 score: 134.2
IPR000915	60S ribosomal protein L6E	PANTHER	PTHR10715	60S RIBOSOMAL PROTEIN L6	coord: 1..231
IPR000915	60S ribosomal protein L6E	PROSITE	PS01170	RIBOSOMAL_L6E	coord: 125..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..68
None	No IPR available	PANTHER	PTHR10715:SF9	60S RIBOSOMAL PROTEIN L6	coord: 1..231
IPR041997	Ribosomal Protein L6, KOW domain	CDD	cd13156	KOW_RPL6	coord: 79..231 e-value: 1.54585E-79 score: 233.594
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 84..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G002110.1	CmaCh01G002110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome