CmaCh01G001200 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G001200
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Auxin-responsive protein
Location	Cma_Chr01: 539825 .. 542091 (+)
RNA-Seq Expression	CmaCh01G001200
Synteny	CmaCh01G001200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAATAACACCGCCTCTCATTCTTCTTCAAAATTAAACATCATCATCATCAAATTTTGTAACCCAGATGGCAACTGAGGGATTAGGCCTCGAAATCACCGAGCTCCGTCTAGGACCAATTCCGGCGAGCAAAAACAATGAGAAGAAAAGGGTCTTCTCGGAGGTGGAAGTGGAAGACAAGAGTGACGGTGGAGGGCGGAAGCAGGTGGTGGGGTGGCCGCCGGTGTGCTCGTACCGGCGGAGGAACAGCTTGAGGGAGAAGGAAGAAAGTGAAGGAATAATGGAGGGGAGGAAAAAGATGTACGTGAAAGTGAGGGTTGAAGGAGAGGCCTTTGTGAGGAAAGTTGATTTGGGAATGGTGAAGGGATATGGGGAACTTGTTGATGCAATGGAGAAGCTCTTTGGGACCCCAATTGGGTGTTCTGAGTGTACTATCACTTACGAAGATAGAGATGGAGATTGGATGCTGGTTGGTGATGTGCCTTGGAAGTATGTTCTCTTTTTTTCTAAAACCCTAAACCCTAAACTCTTTCATATTTGATTATATTTCTTGTAATCATGATTTAGGATCTAATGTATCTGCAGGATGTTCATTGAATCATGCAAGAGATTGAGGATAATCAAGAAATCTAGCTCATAAGCCAAGAGAGAGGTTCTTGAAGGGAGCTATATCAAAACATATAGAATAACTAAGTATCAAGGGATCAGGAGCTCATCGATCACCAACATTTGTTTAGATCCAATCTTCCCTTTTATCTTGTTCTTGTTTTCATATGATTTTATTTTCATAGAAATATTTCAGATATTTAAGTTGCTATAATATATTAGTAAAGTTGATGACTATTGTAATGAAATAGAATTGGGAAGTTTTTCTTTTTCAAGTCATTCCGACCATCATTTAATTTGTTGCCATTTTACTCGATGAATATTATATATTTGTCACAATTCAAGTGTACTACGGGTGAATATTGTCTTTTTTAGGTTTTTTCTTTCAAATTTTCCTCTAAGATTTTACGAGCAAACATGTCAACTAAGGAGAGGTTTCCACACTCTTACATACAAGGAATGCTCCGTTCCCTATTGATGTGATATCTCACAATCCCACCCTCTTTGATGTCTGGTTCTAATATCATTTGTAATAGACAAAATCTACCACTACCCGATATTGTCTTATTTGAGCTTTCCCTTCTAAGCTTTCATTCAAAGTTTTAAAACGTATCCACCGAGTAGATGTCGTTTTTATATAAAGTCTTTTTCTTTTAATATCGGTTTCAATAATTTTTTTAATGGATAGTTTTTATTTATTAATATAATTTCTATTAAAAAGGTAAATGACCTAATATATTTATTTATTAACAACAGAGGAGAGGCAAGGATTTGGACAAGGTCAAGAATATGGAATATAGTCTTCAATTTAACTGATAGAAAAAAATATCTCCTTATTTCTGGTTTAAATGGAAATTCTCCATCTGATTTGGAGCATGTTCCTATGTGGTTGGACATCTCTAAATATTTAGAAATAGTGTTAACCTTACATAATTTTGTAGGCCTAGAAACGCTACTAAACTAATGTACAAGTTATTTGGTTGAAATGATAAGAAATATGATAATGATTCAAGTATTTGGGTCAATAAATCTGAACAGCCACTTATAAAGTCTCTGTTCCAAAAATGTACGAAAGGGTGAAAACCTCACACAGTGAGTTGAGGTAGATAGTAGTTGAGCATTAAAGAGGGCATTCAATAATGGGTTACCAGAAATTATTAAGCCAAATGGGCCACGATGATACATAGCTGGGGATAGTAGCCTACCAAAATACAAACCCATTTGAGACCAATACAATTCCAGCAATGGCGGAAAAGGCAGCAGCTGCAGCAGCACCTCAAGAACAAAAGATGTCGAACGATGATCATGTTATCAAGAGCAGGGAAGACAAAGCCTGTTTCTGTGCTTGGTATGTTTCATAATTATGATTAAATTTTTAATTCCAACCTTTAATTTGCTCTTTTTTTTTTTTCTTTGATTCACATAGTTTGCTTACATTATGTTGCTGTTCTTGCTGCTATGAGACTTGGGACTGTTTTTTGGCTGTCTTATTATGCTGCTGCAGCTGATCGCAAGTTTGGAGCTCATTTCATACCCTAATTGCTATGGCTTCTTATATGTTCTTGACTTGAATTGACCATCTATATATTTTGTATGTTTTTTCCAATTAACTAGTTTTTGTTTTAGAAATTCGTTATGAAAATTATGGTAATCAAATTCAAA

mRNA sequence

TAAATAACACCGCCTCTCATTCTTCTTCAAAATTAAACATCATCATCATCAAATTTTGTAACCCAGATGGCAACTGAGGGATTAGGCCTCGAAATCACCGAGCTCCGTCTAGGACCAATTCCGGCGAGCAAAAACAATGAGAAGAAAAGGGTCTTCTCGGAGGTGGAAGTGGAAGACAAGAGTGACGGTGGAGGGCGGAAGCAGGTGGTGGGGTGGCCGCCGGTGTGCTCGTACCGGCGGAGGAACAGCTTGAGGGAGAAGGAAGAAAGTGAAGGAATAATGGAGGGGAGGAAAAAGATGTACGTGAAAGTGAGGGTTGAAGGAGAGGCCTTTGTGAGGAAAGTTGATTTGGGAATGGTGAAGGGATATGGGGAACTTGTTGATGCAATGGAGAAGCTCTTTGGGACCCCAATTGGGTGTTCTGAGTGTACTATCACTTACGAAGATAGAGATGGAGATTGGATGCTGGTTGGTGATGTGCCTTGGAAGCAGCAGCTGCAGCAGCACCTCAAGAACAAAAGATGTCGAACGATGATCATGTTATCAAGAGCAGGGAAGACAAAGCCTGTTTCTGTGCTTGTTTGCTTACATTATGTTGCTGTTCTTGCTGCTATGAGACTTGGGACTGTTTTTTGGCTGTCTTATTATGCTGCTGCAGCTGATCGCAAGTTTGGAGCTCATTTCATACCCTAATTGCTATGGCTTCTTATATGTTCTTGACTTGAATTGACCATCTATATATTTTGTATGTTTTTTCCAATTAACTAGTTTTTGTTTTAGAAATTCGTTATGAAAATTATGGTAATCAAATTCAAA

Coding sequence (CDS)

ATGGCAACTGAGGGATTAGGCCTCGAAATCACCGAGCTCCGTCTAGGACCAATTCCGGCGAGCAAAAACAATGAGAAGAAAAGGGTCTTCTCGGAGGTGGAAGTGGAAGACAAGAGTGACGGTGGAGGGCGGAAGCAGGTGGTGGGGTGGCCGCCGGTGTGCTCGTACCGGCGGAGGAACAGCTTGAGGGAGAAGGAAGAAAGTGAAGGAATAATGGAGGGGAGGAAAAAGATGTACGTGAAAGTGAGGGTTGAAGGAGAGGCCTTTGTGAGGAAAGTTGATTTGGGAATGGTGAAGGGATATGGGGAACTTGTTGATGCAATGGAGAAGCTCTTTGGGACCCCAATTGGGTGTTCTGAGTGTACTATCACTTACGAAGATAGAGATGGAGATTGGATGCTGGTTGGTGATGTGCCTTGGAAGCAGCAGCTGCAGCAGCACCTCAAGAACAAAAGATGTCGAACGATGATCATGTTATCAAGAGCAGGGAAGACAAAGCCTGTTTCTGTGCTTGTTTGCTTACATTATGTTGCTGTTCTTGCTGCTATGAGACTTGGGACTGTTTTTTGGCTGTCTTATTATGCTGCTGCAGCTGATCGCAAGTTTGGAGCTCATTTCATACCCTAA

Protein sequence

MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRNSLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSECTITYEDRDGDWMLVGDVPWKQQLQQHLKNKRCRTMIMLSRAGKTKPVSVLVCLHYVAVLAAMRLGTVFWLSYYAAAADRKFGAHFIP

Homology

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BLAST of CmaCh01G001200 vs. ExPASy Swiss-Prot
Match: P13088 (Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.8e-34
Identity = 89/182 (48.90%), Postives = 109/182 (59.89%), Query Frame = 0


Query: 1   MATEGLGLEITELRLGPIPA-------SKNNEKKRVFSEVE----VEDKSDGGG------ 60
           MA EGLGLEITELRLG   A       +K NEKKR FSE++     E+ S GGG      
Sbjct: 1   MAKEGLGLEITELRLGLPDAEHQVSVVNKKNEKKRAFSEIDDGVGDENSSSGGGDRKMET 60

Query: 61  -RKQVVGWPPVCSYRRRNSLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYG 120
            + QVVGWPPVCSYR++NS+          EG  KMYVKV ++G  F+RK+DLG+ KGY 
Sbjct: 61  NKSQVVGWPPVCSYRKKNSMN---------EGASKMYVKVSMDGAPFLRKIDLGLHKGYS 120

Query: 121 ELVDAMEKLFG--------TPIGCSECTITYEDRDGDWMLVGDVPWKQQLQQHLKNKRCR 157
           +L  A++KLFG             SE    YED+DGDWMLVGDVPW+  ++     KR R
Sbjct: 121 DLALALDKLFGCYGMVEALKNADNSEHVPIYEDKDGDWMLVGDVPWEMFME---SCKRLR 170

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BLAST of CmaCh01G001200 vs. ExPASy Swiss-Prot
Match: P32293 (Auxin-induced protein 22A OS=Vigna radiata var. radiata OX=3916 GN=AUX22A PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.4e-33
Identity = 90/189 (47.62%), Postives = 114/189 (60.32%), Query Frame = 0


Query: 1   MATEGLGLEITELRLGPIP-------ASKNNEK--KRVFSEVE---VEDKSDGGG----- 60
           MA EGLGLEITELRLG +P       A+KN EK  KRVFSE++    E+ S GGG     
Sbjct: 1   MAKEGLGLEITELRLG-LPDAEHVAVANKNGEKKNKRVFSEIDDVGDENSSSGGGGDRKM 60

Query: 61  --RKQVVGWPPVCSYRRRNSLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGY 120
             + QVVGWPPVCSYR++NS+ E            KMYVKV ++G  F+RK+DLGM KGY
Sbjct: 61  ENKNQVVGWPPVCSYRKKNSVNE----------ASKMYVKVSMDGAPFLRKMDLGMHKGY 120

Query: 121 GELVDAMEKLFG--------TPIGCSECTITYEDRDGDWMLVGDVPWKQQLQQHLKNKRC 163
            +L  A+EKLFG          +   E    YED+DGDWMLVGDVPW+  ++       C
Sbjct: 121 SDLAFALEKLFGCYGMVEALKNVENGEHVPIYEDKDGDWMLVGDVPWEMFMES------C 172

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BLAST of CmaCh01G001200 vs. ExPASy Swiss-Prot
Match: P49680 (Auxin-induced protein IAA6 OS=Pisum sativum OX=3888 GN=IAA6 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.5e-30
Identity = 84/174 (48.28%), Postives = 102/174 (58.62%), Query Frame = 0


Query: 1   MATEGLGLEITELRLG-PIPASKNNEKKRVFSEVE--VEDKSDGGGRK------QVVGWP 60
           MA EGLGLEITELRLG      K NEKKR+FSE++  VE+    G RK      QVVGWP
Sbjct: 1   MAREGLGLEITELRLGLSCGEPKKNEKKRMFSEIDGGVEENGGSGDRKSVDKKNQVVGWP 60

Query: 61  PVCSYRRRNSLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKL 120
           PVCSYR++N           M    KMY+KV ++G  ++RK+DL + KGY EL  A+EKL
Sbjct: 61  PVCSYRKKN-----------MNEGSKMYMKVSMDGAPYLRKIDLCLHKGYLELALALEKL 120

Query: 121 FG---------TPIGCSECTITYEDRDGDWMLVGDVPWKQQLQQHLKNKRCRTM 157
           F              C    I YED+DGDWMLVGDVPW+  ++     KR R M
Sbjct: 121 FDCCGIEEALKDAENCEHVPI-YEDKDGDWMLVGDVPWEMFIE---SCKRLRIM 159

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BLAST of CmaCh01G001200 vs. ExPASy Swiss-Prot
Match: O24541 (Auxin-induced protein 22C OS=Vigna radiata var. radiata OX=3916 GN=AUX22C PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.2e-30
Identity = 78/163 (47.85%), Postives = 100/163 (61.35%), Query Frame = 0


Query: 1   MATEGLGLEITELRLGPIPAS---------KNNEKKRVFSEVEVED-KSDGGGRK----Q 60
           M  E LGLEITELRLG +P +         KN  KKRVFS++E E+  S+  G+K    Q
Sbjct: 1   MEKEDLGLEITELRLG-LPGAGGENNTDKDKNKNKKRVFSDIEGENSSSEEDGKKETKNQ 60

Query: 61  VVGWPPVCSYRRRNSLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVD 120
           VVGWPPVCSYR++N++ E            K+YVKV ++G  F+RK+DL M KGY +L  
Sbjct: 61  VVGWPPVCSYRKKNTVNE-----------PKLYVKVSMDGAPFLRKIDLAMHKGYSDLAF 120

Query: 121 AMEKLFGTPIGC--------SECTITYEDRDGDWMLVGDVPWK 142
           A++K FG    C        +E    YED+DGDWMLVGDVPW+
Sbjct: 121 ALDKFFGCYGICEALKDAENAEHVPIYEDKDGDWMLVGDVPWE 151

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BLAST of CmaCh01G001200 vs. ExPASy Swiss-Prot
Match: P33078 (Auxin-responsive protein IAA5 OS=Arabidopsis thaliana OX=3702 GN=IAA5 PE=1 SV=3)

HSP 1 Score: 132.9 bits (333), Expect = 4.2e-30
Identity = 75/153 (49.02%), Postives = 91/153 (59.48%), Query Frame = 0


Query: 3   TEGLGLEITELRLG-----PIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYR 62
           +  LGLEITELRLG      +     + KKR   EVE++ K +   + QVVGWPPVCSYR
Sbjct: 5   SNNLGLEITELRLGLPGDIVVSGESISGKKRASPEVEIDLKCEPAKKSQVVGWPPVCSYR 64

Query: 63  RRNSLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIG 122
           R+NSL          E  K  YVKV V+G AF+RK+DL M K Y +L  A++ LFG  I 
Sbjct: 65  RKNSL----------ERTKSSYVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYIN 124

Query: 123 C------SECTITYEDRDGDWMLVGDVPWKQQL 145
                  SEC   YED+DGDWML GDVPW+  L
Sbjct: 125 FDDTLKESECVPIYEDKDGDWMLAGDVPWEMFL 147

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BLAST of CmaCh01G001200 vs. ExPASy TrEMBL
Match: A0A6J1KF83 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111492708 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.5e-75
Identity = 141/145 (97.24%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60
           MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN
Sbjct: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60

Query: 61  SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE 120
           SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE
Sbjct: 61  SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE 120

Query: 121 CTITYEDRDGDWMLVGDVPWKQQLQ 146
           CTITYEDRDGDWMLVGDVPWK  ++
Sbjct: 121 CTITYEDRDGDWMLVGDVPWKMFIE 145

[Close]

BLAST of CmaCh01G001200 vs. ExPASy TrEMBL
Match: A0A6J1KCT2 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111492708 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.0e-75
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60
           MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN
Sbjct: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60

Query: 61  SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE 120
           SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE
Sbjct: 61  SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE 120

Query: 121 CTITYEDRDGDWMLVGDVPWK 142
           CTITYEDRDGDWMLVGDVPWK
Sbjct: 121 CTITYEDRDGDWMLVGDVPWK 141

[Close]

BLAST of CmaCh01G001200 vs. ExPASy TrEMBL
Match: A0A6J1GBF3 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111452634 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.4e-73
Identity = 137/145 (94.48%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60
           MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN
Sbjct: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60

Query: 61  SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE 120
           SLREKEESEG+M GRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDA+EKLFGTPIGCS 
Sbjct: 61  SLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIGCSH 120

Query: 121 CTITYEDRDGDWMLVGDVPWKQQLQ 146
           CTITYEDRDGDWMLVGDVPWK  ++
Sbjct: 121 CTITYEDRDGDWMLVGDVPWKMFIE 145

[Close]

BLAST of CmaCh01G001200 vs. ExPASy TrEMBL
Match: A0A6J1GBF6 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111452634 PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.9e-73
Identity = 137/141 (97.16%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60
           MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN
Sbjct: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60

Query: 61  SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE 120
           SLREKEESEG+M GRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDA+EKLFGTPIGCS 
Sbjct: 61  SLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIGCSH 120

Query: 121 CTITYEDRDGDWMLVGDVPWK 142
           CTITYEDRDGDWMLVGDVPWK
Sbjct: 121 CTITYEDRDGDWMLVGDVPWK 141

[Close]

BLAST of CmaCh01G001200 vs. ExPASy TrEMBL
Match: A0A5D3DA37 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00040 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 8.5e-50
Identity = 116/172 (67.44%), Postives = 128/172 (74.42%), Query Frame = 0


Query: 1   MATEGLGLEITELRLG-------PIPASKNNEKKRVFSEVEVEDKS-----DGGGRKQVV 60
           MA +GL LEITELRLG        I  SKNNEKKRVFSEVEVEDKS     D G RKQVV
Sbjct: 4   MAAKGLDLEITELRLGLPGDCGSLISTSKNNEKKRVFSEVEVEDKSRAKGEDEGRRKQVV 63

Query: 61  GWPPVCSYRRRNSLREKE--ESEGIME--GRKKMYVKVRVEGEAFVRKVDLGMVKGYGEL 120
           GWPPVCSYR+R+S + K   ESEGIM    +K+MYVKV  EG  F+RKVDLGMVKGYG+L
Sbjct: 64  GWPPVCSYRQRSSFKGKGECESEGIMNMGMKKQMYVKVSFEGTPFLRKVDLGMVKGYGDL 123

Query: 121 VDAMEKLFGTPIGCSECTITYEDRDGDWMLVGDVPWKQQLQQHLKNKRCRTM 157
           V AMEKLFG+PIGC E T+TYEDRDGDWMLVGDVPWK  ++     KR R M
Sbjct: 124 VGAMEKLFGSPIGCYEYTVTYEDRDGDWMLVGDVPWKMFIE---SCKRLRIM 172

[Close]

BLAST of CmaCh01G001200 vs. NCBI nr
Match: XP_022997883.1 (auxin-induced protein AUX22-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 292.4 bits (747), Expect = 3.2e-75
Identity = 141/145 (97.24%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60
           MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN
Sbjct: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60

Query: 61  SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE 120
           SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE
Sbjct: 61  SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE 120

Query: 121 CTITYEDRDGDWMLVGDVPWKQQLQ 146
           CTITYEDRDGDWMLVGDVPWK  ++
Sbjct: 121 CTITYEDRDGDWMLVGDVPWKMFIE 145

[Close]

BLAST of CmaCh01G001200 vs. NCBI nr
Match: XP_022997884.1 (auxin-induced protein AUX22-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 292.0 bits (746), Expect = 4.2e-75
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60
           MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN
Sbjct: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60

Query: 61  SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE 120
           SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE
Sbjct: 61  SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE 120

Query: 121 CTITYEDRDGDWMLVGDVPWK 142
           CTITYEDRDGDWMLVGDVPWK
Sbjct: 121 CTITYEDRDGDWMLVGDVPWK 141

[Close]

BLAST of CmaCh01G001200 vs. NCBI nr
Match: KAG7036487.1 (Auxin-induced protein 22A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 287.7 bits (735), Expect = 7.8e-74
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60
           MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN
Sbjct: 177 MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 236

Query: 61  SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE 120
           SLREKEESEGIM GRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCS 
Sbjct: 237 SLREKEESEGIMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSH 296

Query: 121 CTITYEDRDGDWMLVGDVPWKQQLQ 146
           CTITYEDRDGDWMLVGDVPWK  ++
Sbjct: 297 CTITYEDRDGDWMLVGDVPWKMFIE 321

[Close]

BLAST of CmaCh01G001200 vs. NCBI nr
Match: KAG6606774.1 (Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 287.7 bits (735), Expect = 7.8e-74
Identity = 139/145 (95.86%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60
           MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN
Sbjct: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60

Query: 61  SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE 120
           SLREKEESEGIM GRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCS 
Sbjct: 61  SLREKEESEGIMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSH 120

Query: 121 CTITYEDRDGDWMLVGDVPWKQQLQ 146
           CTITYEDRDGDWMLVGDVPWK  ++
Sbjct: 121 CTITYEDRDGDWMLVGDVPWKMFIE 145

[Close]

BLAST of CmaCh01G001200 vs. NCBI nr
Match: XP_022949217.1 (auxin-induced protein AUX22-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 285.8 bits (730), Expect = 3.0e-73
Identity = 137/145 (94.48%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60
           MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN
Sbjct: 1   MATEGLGLEITELRLGPIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYRRRN 60

Query: 61  SLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIGCSE 120
           SLREKEESEG+M GRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDA+EKLFGTPIGCS 
Sbjct: 61  SLREKEESEGVMGGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAVEKLFGTPIGCSH 120

Query: 121 CTITYEDRDGDWMLVGDVPWKQQLQ 146
           CTITYEDRDGDWMLVGDVPWK  ++
Sbjct: 121 CTITYEDRDGDWMLVGDVPWKMFIE 145

[Close]

BLAST of CmaCh01G001200 vs. TAIR 10
Match: AT1G15580.1 (indole-3-acetic acid inducible 5 )

HSP 1 Score: 132.9 bits (333), Expect = 3.0e-31
Identity = 75/153 (49.02%), Postives = 91/153 (59.48%), Query Frame = 0


Query: 3   TEGLGLEITELRLG-----PIPASKNNEKKRVFSEVEVEDKSDGGGRKQVVGWPPVCSYR 62
           +  LGLEITELRLG      +     + KKR   EVE++ K +   + QVVGWPPVCSYR
Sbjct: 5   SNNLGLEITELRLGLPGDIVVSGESISGKKRASPEVEIDLKCEPAKKSQVVGWPPVCSYR 64

Query: 63  RRNSLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLFGTPIG 122
           R+NSL          E  K  YVKV V+G AF+RK+DL M K Y +L  A++ LFG  I 
Sbjct: 65  RKNSL----------ERTKSSYVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYIN 124

Query: 123 C------SECTITYEDRDGDWMLVGDVPWKQQL 145
                  SEC   YED+DGDWML GDVPW+  L
Sbjct: 125 FDDTLKESECVPIYEDKDGDWMLAGDVPWEMFL 147

[Close]

BLAST of CmaCh01G001200 vs. TAIR 10
Match: AT3G15540.1 (indole-3-acetic acid inducible 19 )

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-26
Identity = 79/199 (39.70%), Postives = 108/199 (54.27%), Query Frame = 0


Query: 1   MATEGLGLEITELRLGPIP---ASKNNEKKRVFSEVEVEDK------------SDGG--- 60
           M  EGLGLEITELRLG +P    ++   KKR F+E+ +               S GG   
Sbjct: 1   MEKEGLGLEITELRLG-LPGRDVAEKMMKKRAFTEMNMTSSGSNSDQCESGVVSSGGDAE 60

Query: 61  -------GRKQVVGWPPVCSYRRRNSLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDL 120
                   + QVVGWPPVCSYR++NS +E   ++  +      YVKV ++G  ++RK+DL
Sbjct: 61  KVNDSPAAKSQVVGWPPVCSYRKKNSCKEASTTKVGLG-----YVKVSMDGVPYLRKMDL 120

Query: 121 GMVKGYGELVDAMEKLFG-TPIG--------CSECTITYEDRDGDWMLVGDVPWKQQLQQ 166
           G  +GY +L  A++KLFG   IG        C   TI YED+DGDWML GDVPW   L+ 
Sbjct: 121 GSSQGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTI-YEDKDGDWMLAGDVPWGMFLES 180

[Close]

BLAST of CmaCh01G001200 vs. TAIR 10
Match: AT1G52830.1 (indole-3-acetic acid 6 )

HSP 1 Score: 113.2 bits (282), Expect = 2.5e-25
Identity = 77/197 (39.09%), Postives = 103/197 (52.28%), Query Frame = 0


Query: 1   MATEGLGLEITELRLGPIPASKNNE---------KKRVFSEV----------------EV 60
           MA EGL LEITELRLG +P    +E         KKRV S++                 V
Sbjct: 1   MAKEGLALEITELRLG-LPGDNYSEISVCGSSKKKKRVLSDMMTSSALDTENENSVVSSV 60

Query: 61  EDKSDGGGRKQVVGWPPVCSYRRRNSLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDL 120
           ED+S    + Q VGWPPVCSYRR+ +  E  ++ G        YVKV ++G  ++RK+DL
Sbjct: 61  EDESLPVVKSQAVGWPPVCSYRRKKNNEEASKAIG--------YVKVSMDGVPYMRKIDL 120

Query: 121 GMVKGYGELVDAMEKLFG-TPIGCS------ECTITYEDRDGDWMLVGDVPWKQQLQQHL 166
           G    Y  LV  +E LFG   IG +      E  I YED+D DWMLVGDVPW+      +
Sbjct: 121 GSSNSYINLVTVLENLFGCLGIGVAKEGKKCEYIIIYEDKDRDWMLVGDVPWQ------M 180

[Close]

BLAST of CmaCh01G001200 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 109.8 bits (273), Expect = 2.7e-24
Identity = 69/167 (41.32%), Postives = 93/167 (55.69%), Query Frame = 0


Query: 4   EGLGLEITELRLGPIPASK------------NNEKKRVFS---EVEVEDKS-----DGGG 63
           E + L+ TELRLG +P +             NN  KRV S   E E+E  S         
Sbjct: 3   EFVNLKETELRLG-LPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPR 62

Query: 64  RKQVVGWPPVCSYRRRNSLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGE 123
           + Q+VGWPPV SYR+ N   +K ESE   +G   +YVKV ++G  ++RK+DL   KGY E
Sbjct: 63  KAQIVGWPPVRSYRKNNIQSKKNESEHEGQG---IYVKVSMDGAPYLRKIDLSCYKGYSE 122

Query: 124 LVDAMEKLFGTPIG---------CSECTITYEDRDGDWMLVGDVPWK 142
           L+ A+E +F   +G          S+   TYED+DGDWML+GDVPW+
Sbjct: 123 LLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWE 165

[Close]

BLAST of CmaCh01G001200 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 105.5 bits (262), Expect = 5.1e-23
Identity = 63/158 (39.87%), Postives = 91/158 (57.59%), Query Frame = 0


Query: 4   EGLGLEITELRLG------PIPASKNNEK---KRVFSEVEVEDKSDGGG--RKQVVGWPP 63
           E + L+ TELRLG       +   K+N++   +    E+E   K++     + Q+VGWPP
Sbjct: 9   ELVNLKATELRLGLPGTEETVSCGKSNKRVLPEATEKEIESTGKTETASPPKAQIVGWPP 68

Query: 64  VCSYRRRNSLREKEESEGIMEGRKKMYVKVRVEGEAFVRKVDLGMVKGYGELVDAMEKLF 123
           V SYR+ N   +K ESEG     +  YVKV ++G  ++RK+DL M K Y EL+ ++E +F
Sbjct: 69  VRSYRKNNVQTKKSESEG-----QGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMF 128

Query: 124 GTPIG---------CSECTITYEDRDGDWMLVGDVPWK 142
              +G          S+   TYED+DGDWMLVGDVPW+
Sbjct: 129 KFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWE 161

The following BLAST results are available for this feature:

BLAST of CmaCh01G001200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P13088	2.8e-34	48.90	Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1	[more]
P32293	1.4e-33	47.62	Auxin-induced protein 22A OS=Vigna radiata var. radiata OX=3916 GN=AUX22A PE=2 S...	[more]
P49680	2.5e-30	48.28	Auxin-induced protein IAA6 OS=Pisum sativum OX=3888 GN=IAA6 PE=2 SV=1	[more]
O24541	4.2e-30	47.85	Auxin-induced protein 22C OS=Vigna radiata var. radiata OX=3916 GN=AUX22C PE=2 S...	[more]
P33078	4.2e-30	49.02	Auxin-responsive protein IAA5 OS=Arabidopsis thaliana OX=3702 GN=IAA5 PE=1 SV=3	[more]

BLAST of CmaCh01G001200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KF83	1.5e-75	97.24	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111492708 PE=3 SV=1	[more]
A0A6J1KCT2	2.0e-75	100.00	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111492708 PE=3 SV=1	[more]
A0A6J1GBF3	1.4e-73	94.48	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111452634 PE=3 SV=1	[more]
A0A6J1GBF6	1.9e-73	97.16	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111452634 PE=3 SV=1	[more]
A0A5D3DA37	8.5e-50	67.44	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of CmaCh01G001200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997883.1	3.2e-75	97.24	auxin-induced protein AUX22-like isoform X1 [Cucurbita maxima]	[more]
XP_022997884.1	4.2e-75	100.00	auxin-induced protein AUX22-like isoform X2 [Cucurbita maxima]	[more]
KAG7036487.1	7.8e-74	95.86	Auxin-induced protein 22A, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6606774.1	7.8e-74	95.86	Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022949217.1	3.0e-73	94.48	auxin-induced protein AUX22-like isoform X1 [Cucurbita moschata]	[more]

BLAST of CmaCh01G001200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15580.1	3.0e-31	49.02	indole-3-acetic acid inducible 5	[more]
AT3G15540.1	1.3e-26	39.70	indole-3-acetic acid inducible 19	[more]
AT1G52830.1	2.5e-25	39.09	indole-3-acetic acid 6	[more]
AT1G04240.1	2.7e-24	41.32	AUX/IAA transcriptional regulator family protein	[more]
AT5G43700.1	5.1e-23	39.87	AUX/IAA transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 119..142 e-value: 4.5E-10 score: 39.8 coord: 29..115 e-value: 3.1E-18 score: 66.5
None	No IPR available	GENE3D	3.10.20.90		coord: 72..163 e-value: 1.0E-22 score: 82.0
None	No IPR available	PANTHER	PTHR31734:SF87	AUXIN-RESPONSIVE PROTEIN IAA6	coord: 4..144
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 76..147
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 4..144
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 77..163 score: 16.214804

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G001200.1	CmaCh01G001200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding