CmaCh01G000920 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G000920
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Oxidative stress 3, putative isoform 2
Location	Cma_Chr01: 423896 .. 425000 (+)
RNA-Seq Expression	CmaCh01G000920
Synteny	CmaCh01G000920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATTTTTAATTTTATTTATTTAAAATAAAAAAAATAAAAAGCAACAGCTTGGAATTTTCTCTTGCTGCCTATAAATGTTCCACAAGAAATGTGATAAGACTCAAATGCTGTTTATGTTGAAGGGGTTATAATATAAATACATCAAAAGCTTATCCCATCAAAGCATCCTCTATCAATTTCTGGTTTTTTTTCTCTGTTTCTCTCTATTTGTGTTGCTGCTGTTCTTCATCTTTCTGCTTGAATATGGGTGGATTCCTTCATCAACCTTGTTCTGTTGCTCTGTGCCAAGGGTTCCATGAAGAGTCGGAAGATCAATGGGGCAAGGGCGGTGAGTATCACTACAACCTTGCCTCTTCCACATCTTCCTTCGAAGATTCAAGCAATTCGTCGGATGATGCGTGTTCATCCACTTCAAATTCTTCATCTCCATCCATTGGAGCGTTGGAGGATTTTACAGAGCTTTTTGCCCAACTCCCGATCAAGTAAGTGTTGTCGTGTTGATGCGATGCTTCCAATTCCCTTTCCCTCCATAAAAGAGTTCAAATTTGTAACGCCAACCACTGTTTGTTTGTGTAGGAGAGGACTGTCCATGTTCTATGAAGGGAAATCCCAGTCGTTTACATCGCTATCAAGCGTAAGAAGCATAGAAGACCTTCCGAAGAAGAGAAGCCCTTACAGCAGTAGATTGAGCGGATGTAAGAGCTATGCAGGAGGGTTGGACACCCACAAATGTGCTGCTTATACTCTTCCCAAGGCTCCCAGTTTTAAGAAGGCATCATCGTCATCCAAGAAGATCTCTGTCTCTTGTCCCGGTTATGAGAGGCAGTGATTTGGTTGGTTGGTTGGTTGTGATAGCTTTCCATTTCTGTATATGATGTCTGAGTAGTAGGTTTACAGCATTAAATTGGCCCATTTTTGTTGGGAATTTTGGTTGTACAATAGGGGAATGATTGATATTGATCTAAACTATTATGGAGTTCAGATGTTAGTTGTAAGAGGAGGAATGAATGTTAATAACACAACTGGGTACAGAATTCATACGCGTAGAAACTGGAAAATTAGTACTCTTCTTCTACATCATAAATGAATTGATGAGCAATGGG

mRNA sequence

TTTATTTTTAATTTTATTTATTTAAAATAAAAAAAATAAAAAGCAACAGCTTGGAATTTTCTCTTGCTGCCTATAAATGTTCCACAAGAAATGTGATAAGACTCAAATGCTGTTTATGTTGAAGGGGTTATAATATAAATACATCAAAAGCTTATCCCATCAAAGCATCCTCTATCAATTTCTGGTTTTTTTTCTCTGTTTCTCTCTATTTGTGTTGCTGCTGTTCTTCATCTTTCTGCTTGAATATGGGTGGATTCCTTCATCAACCTTGTTCTGTTGCTCTGTGCCAAGGGTTCCATGAAGAGTCGGAAGATCAATGGGGCAAGGGCGGTGAGTATCACTACAACCTTGCCTCTTCCACATCTTCCTTCGAAGATTCAAGCAATTCGTCGGATGATGCGTGTTCATCCACTTCAAATTCTTCATCTCCATCCATTGGAGCGTTGGAGGATTTTACAGAGCTTTTTGCCCAACTCCCGATCAAGAGAGGACTGTCCATGTTCTATGAAGGGAAATCCCAGTCGTTTACATCGCTATCAAGCGTAAGAAGCATAGAAGACCTTCCGAAGAAGAGAAGCCCTTACAGCAGTAGATTGAGCGGATGTAAGAGCTATGCAGGAGGGTTGGACACCCACAAATGTGCTGCTTATACTCTTCCCAAGGCTCCCAGTTTTAAGAAGGCATCATCGTCATCCAAGAAGATCTCTGTCTCTTGTCCCGGTTATGAGAGGCAGTGATTTGGTTGGTTGGTTGGTTGTGATAGCTTTCCATTTCTGTATATGATGTCTGAGTAGTAGGTTTACAGCATTAAATTGGCCCATTTTTGTTGGGAATTTTGGTTGTACAATAGGGGAATGATTGATATTGATCTAAACTATTATGGAGTTCAGATGTTAGTTGTAAGAGGAGGAATGAATGTTAATAACACAACTGGGTACAGAATTCATACGCGTAGAAACTGGAAAATTAGTACTCTTCTTCTACATCATAAATGAATTGATGAGCAATGGG

Coding sequence (CDS)

ATGGGTGGATTCCTTCATCAACCTTGTTCTGTTGCTCTGTGCCAAGGGTTCCATGAAGAGTCGGAAGATCAATGGGGCAAGGGCGGTGAGTATCACTACAACCTTGCCTCTTCCACATCTTCCTTCGAAGATTCAAGCAATTCGTCGGATGATGCGTGTTCATCCACTTCAAATTCTTCATCTCCATCCATTGGAGCGTTGGAGGATTTTACAGAGCTTTTTGCCCAACTCCCGATCAAGAGAGGACTGTCCATGTTCTATGAAGGGAAATCCCAGTCGTTTACATCGCTATCAAGCGTAAGAAGCATAGAAGACCTTCCGAAGAAGAGAAGCCCTTACAGCAGTAGATTGAGCGGATGTAAGAGCTATGCAGGAGGGTTGGACACCCACAAATGTGCTGCTTATACTCTTCCCAAGGCTCCCAGTTTTAAGAAGGCATCATCGTCATCCAAGAAGATCTCTGTCTCTTGTCCCGGTTATGAGAGGCAGTGA

Protein sequence

MGGFLHQPCSVALCQGFHEESEDQWGKGGEYHYNLASSTSSFEDSSNSSDDACSSTSNSSSPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGCKSYAGGLDTHKCAAYTLPKAPSFKKASSSSKKISVSCPGYERQ

Homology

[Close]

BLAST of CmaCh01G000920 vs. ExPASy TrEMBL
Match: A0A6J1KCR8 (uncharacterized protein LOC111492699 OS=Cucurbita maxima OX=3661 GN=LOC111492699 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.4e-84
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MGGFLHQPCSVALCQGFHEESEDQWGKGGEYHYNLASSTSSFEDSSNSSDDACSSTSNSS 60
           MGGFLHQPCSVALCQGFHEESEDQWGKGGEYHYNLASSTSSFEDSSNSSDDACSSTSNSS
Sbjct: 1   MGGFLHQPCSVALCQGFHEESEDQWGKGGEYHYNLASSTSSFEDSSNSSDDACSSTSNSS 60

Query: 61  SPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC 120
           SPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC
Sbjct: 61  SPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC 120

Query: 121 KSYAGGLDTHKCAAYTLPKAPSFKKASSSSKKISVSCPGYERQ 164
           KSYAGGLDTHKCAAYTLPKAPSFKKASSSSKKISVSCPGYERQ
Sbjct: 121 KSYAGGLDTHKCAAYTLPKAPSFKKASSSSKKISVSCPGYERQ 163

[Close]

BLAST of CmaCh01G000920 vs. ExPASy TrEMBL
Match: A0A6J1GAT2 (uncharacterized protein LOC111452482 OS=Cucurbita moschata OX=3662 GN=LOC111452482 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.2e-72
Identity = 152/164 (92.68%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 1   MGGFLHQPCSVALCQGFHEESEDQWGKGGEYHYNLASSTSSFEDSSNSSDDACSSTSNSS 60
           MGG LHQPCSVALC+GFH   ED WGKGGEY YNLASSTSSFEDSSNSSDDACSSTSNSS
Sbjct: 1   MGGLLHQPCSVALCKGFH---EDDWGKGGEYDYNLASSTSSFEDSSNSSDDACSSTSNSS 60

Query: 61  SPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC 120
           SPS GALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC
Sbjct: 61  SPSNGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC 120

Query: 121 KSYAGGLDTHKCAAYTLPKAPSFKKA-SSSSKKISVSCPGYERQ 164
           KSYAGGLDTHK +AYTLPKAP+FKKA SSSSKKISVSCPGYERQ
Sbjct: 121 KSYAGGLDTHK-SAYTLPKAPTFKKASSSSSKKISVSCPGYERQ 160

[Close]

BLAST of CmaCh01G000920 vs. ExPASy TrEMBL
Match: A0A5D3CBD2 (Oxidative stress 3, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00260 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.4e-47
Identity = 114/157 (72.61%), Postives = 128/157 (81.53%), Query Frame = 0


Query: 5   LHQPCSVALCQGFHEESEDQW--GKGGEYHYNLASSTSSFEDSSNSS---------DDAC 64
           LHQPCS  L Q FHE+ ED W   KGG+  YN+ASSTSSFEDS+ SS         DDAC
Sbjct: 9   LHQPCSATLHQDFHEDLEDHWRITKGGD-QYNVASSTSSFEDSTISSESLSSSDLADDAC 68

Query: 65  SSTSNSSSPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPY 124
           SSTSNSSS S G LEDFT+LFAQLPIKRGLSMFY+GKS+SFTSLSSV+SIED+PKK +PY
Sbjct: 69  SSTSNSSSQSNGPLEDFTDLFAQLPIKRGLSMFYQGKSRSFTSLSSVKSIEDIPKKPNPY 128

Query: 125 SSRLSGCKSYAGGLDTHKCAAYTLPKAPSFKKASSSS 151
           S RL+ CKSYAGGLDTHK ++YTLPKAP+FKKAS SS
Sbjct: 129 SRRLNTCKSYAGGLDTHK-SSYTLPKAPTFKKASKSS 163

[Close]

BLAST of CmaCh01G000920 vs. ExPASy TrEMBL
Match: A0A1S3BH50 (uncharacterized protein LOC103489976 OS=Cucumis melo OX=3656 GN=LOC103489976 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.4e-47
Identity = 114/157 (72.61%), Postives = 128/157 (81.53%), Query Frame = 0


Query: 5   LHQPCSVALCQGFHEESEDQW--GKGGEYHYNLASSTSSFEDSSNSS---------DDAC 64
           LHQPCS  L Q FHE+ ED W   KGG+  YN+ASSTSSFEDS+ SS         DDAC
Sbjct: 9   LHQPCSATLHQDFHEDLEDHWRITKGGD-QYNVASSTSSFEDSTISSESLSSSDLADDAC 68

Query: 65  SSTSNSSSPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPY 124
           SSTSNSSS S G LEDFT+LFAQLPIKRGLSMFY+GKS+SFTSLSSV+SIED+PKK +PY
Sbjct: 69  SSTSNSSSQSNGPLEDFTDLFAQLPIKRGLSMFYQGKSRSFTSLSSVKSIEDIPKKPNPY 128

Query: 125 SSRLSGCKSYAGGLDTHKCAAYTLPKAPSFKKASSSS 151
           S RL+ CKSYAGGLDTHK ++YTLPKAP+FKKAS SS
Sbjct: 129 SRRLNTCKSYAGGLDTHK-SSYTLPKAPTFKKASKSS 163

[Close]

BLAST of CmaCh01G000920 vs. ExPASy TrEMBL
Match: A0A6J1DLD1 (uncharacterized protein LOC111021114 OS=Momordica charantia OX=3673 GN=LOC111021114 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.6e-46
Identity = 113/160 (70.62%), Postives = 126/160 (78.75%), Query Frame = 0


Query: 1   MGGF----LHQPCSVALCQGFHEESEDQWGKGGEYHYNLASSTSSFEDSSNSS------D 60
           MGG     L +  SVA+CQ FHE  E+ W      HYN+ASSTSSFEDSS SS      +
Sbjct: 1   MGGIQRQTLRESRSVAVCQEFHENLEEHWVSKRSDHYNVASSTSSFEDSSVSSGSLSSIE 60

Query: 61  DACSSTSNSSSPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKR 120
           DACSSTSN+SS S G LEDFTEL AQLPIKRGLSMFY+GKSQSFTSLSSV+SIEDLPKK 
Sbjct: 61  DACSSTSNTSSESSGPLEDFTELLAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDLPKKE 120

Query: 121 SPYSSRLSGCKSYAGGLDTHKCAAYTLPKAPSFKKASSSS 151
           +PYS RL+G KSYAGGLDTHK ++YTLPKAP+FKKAS SS
Sbjct: 121 NPYSRRLNGYKSYAGGLDTHK-SSYTLPKAPTFKKASRSS 159

[Close]

BLAST of CmaCh01G000920 vs. NCBI nr
Match: XP_022997869.1 (uncharacterized protein LOC111492699 [Cucurbita maxima])

HSP 1 Score: 320.1 bits (819), Expect = 1.1e-83
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MGGFLHQPCSVALCQGFHEESEDQWGKGGEYHYNLASSTSSFEDSSNSSDDACSSTSNSS 60
           MGGFLHQPCSVALCQGFHEESEDQWGKGGEYHYNLASSTSSFEDSSNSSDDACSSTSNSS
Sbjct: 1   MGGFLHQPCSVALCQGFHEESEDQWGKGGEYHYNLASSTSSFEDSSNSSDDACSSTSNSS 60

Query: 61  SPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC 120
           SPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC
Sbjct: 61  SPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC 120

Query: 121 KSYAGGLDTHKCAAYTLPKAPSFKKASSSSKKISVSCPGYERQ 164
           KSYAGGLDTHKCAAYTLPKAPSFKKASSSSKKISVSCPGYERQ
Sbjct: 121 KSYAGGLDTHKCAAYTLPKAPSFKKASSSSKKISVSCPGYERQ 163

[Close]

BLAST of CmaCh01G000920 vs. NCBI nr
Match: XP_023524906.1 (uncharacterized protein LOC111788696 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.9 bits (764), Expect = 2.7e-77
Identity = 158/168 (94.05%), Postives = 159/168 (94.64%), Query Frame = 0


Query: 1   MGGFLHQPCSVALCQGFHEESEDQWGKGGEY-HYNLASSTSSFEDSSNSSDDACSSTSNS 60
           MGG LHQPCSVALC+GFHEE ED WGKGGEY HYNLASSTSSFEDSSNSSDDACSSTSNS
Sbjct: 1   MGGLLHQPCSVALCKGFHEELEDDWGKGGEYHHYNLASSTSSFEDSSNSSDDACSSTSNS 60

Query: 61  SSPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSG 120
           SSPS GALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSG
Sbjct: 61  SSPSNGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSG 120

Query: 121 CKSYAGGLDTHKCAAYTLPKAPSFKKA----SSSSKKISVSCPGYERQ 164
           CKSYAGGLDTHKCAAYTLPKAPSFKKA    SSSSKKISVSCPGYERQ
Sbjct: 121 CKSYAGGLDTHKCAAYTLPKAPSFKKASSSSSSSSKKISVSCPGYERQ 168

[Close]

BLAST of CmaCh01G000920 vs. NCBI nr
Match: KAG7036459.1 (hypothetical protein SDJN02_00076 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 292.0 bits (746), Expect = 3.3e-75
Identity = 155/166 (93.37%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 1   MGGFLHQPCSVALCQGFHEESEDQWGKGGEYHYNLASSTSSFEDSSNSSDDACSSTSNSS 60
           MGG LHQPCSVALC+GFH   ED WGKGGEY YNLASSTSSFEDSSNSSDDACSSTSNSS
Sbjct: 1   MGGLLHQPCSVALCKGFH---EDDWGKGGEYDYNLASSTSSFEDSSNSSDDACSSTSNSS 60

Query: 61  SPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC 120
           SPS GALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC
Sbjct: 61  SPSNGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC 120

Query: 121 KSYAGGLDTHKCAAYTLPKAPSFKKA---SSSSKKISVSCPGYERQ 164
           KSYAGGLDTHKCAAYTLPKAPSFKKA   SSSSKKISVSCPGYERQ
Sbjct: 121 KSYAGGLDTHKCAAYTLPKAPSFKKASSSSSSSKKISVSCPGYERQ 163

[Close]

BLAST of CmaCh01G000920 vs. NCBI nr
Match: KAG6606744.1 (hypothetical protein SDJN03_00086, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 291.2 bits (744), Expect = 5.6e-75
Identity = 154/165 (93.33%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 1   MGGFLHQPCSVALCQGFHEESEDQWGKGGEYHYNLASSTSSFEDSSNSSDDACSSTSNSS 60
           MGG LHQPCSVALC+GFH   ED WGKGGEY YNLASSTSSFEDSSNSSDDACSSTSNSS
Sbjct: 1   MGGLLHQPCSVALCKGFH---EDDWGKGGEYDYNLASSTSSFEDSSNSSDDACSSTSNSS 60

Query: 61  SPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC 120
           SPS GALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC
Sbjct: 61  SPSNGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC 120

Query: 121 KSYAGGLDTHKCAAYTLPKAPSFKKA--SSSSKKISVSCPGYERQ 164
           KSYAGGLDTHKCA+YTLPKAPSFKKA  SSSSKKISVSCPGYERQ
Sbjct: 121 KSYAGGLDTHKCASYTLPKAPSFKKASSSSSSKKISVSCPGYERQ 162

[Close]

BLAST of CmaCh01G000920 vs. NCBI nr
Match: XP_022949011.1 (uncharacterized protein LOC111452482 [Cucurbita moschata])

HSP 1 Score: 282.3 bits (721), Expect = 2.6e-72
Identity = 152/164 (92.68%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 1   MGGFLHQPCSVALCQGFHEESEDQWGKGGEYHYNLASSTSSFEDSSNSSDDACSSTSNSS 60
           MGG LHQPCSVALC+GFH   ED WGKGGEY YNLASSTSSFEDSSNSSDDACSSTSNSS
Sbjct: 1   MGGLLHQPCSVALCKGFH---EDDWGKGGEYDYNLASSTSSFEDSSNSSDDACSSTSNSS 60

Query: 61  SPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC 120
           SPS GALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC
Sbjct: 61  SPSNGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRSIEDLPKKRSPYSSRLSGC 120

Query: 121 KSYAGGLDTHKCAAYTLPKAPSFKKA-SSSSKKISVSCPGYERQ 164
           KSYAGGLDTHK +AYTLPKAP+FKKA SSSSKKISVSCPGYERQ
Sbjct: 121 KSYAGGLDTHK-SAYTLPKAPTFKKASSSSSKKISVSCPGYERQ 160

[Close]

BLAST of CmaCh01G000920 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 )

HSP 1 Score: 70.1 bits (170), Expect = 1.9e-12
Identity = 54/127 (42.52%), Postives = 73/127 (57.48%), Query Frame = 0


Query: 34  NLASSTSSFEDSSNSSDDACSSTSNSSSPSIGALEDFTELFAQLPIKRGLSMFYEGKSQS 93
           +L+SS  S     +  DD  SS+SN      G LED ++L + LPIKRGLS FYEGKSQS
Sbjct: 48  SLSSSMCSDFTEDDDDDDVSSSSSN------GPLEDLSDLMSHLPIKRGLSKFYEGKSQS 107

Query: 94  FTSLSSVRSIEDLPK---KRSPYSSRLSGCKSYAGGLDTHKCAAYTLPKAPSFKKASSSS 153
           FTSL +V+S+EDL K   K   Y ++    +S  G LD      ++ PKA   KK + + 
Sbjct: 108 FTSLGNVKSLEDLMKRGFKSRNYGAKRKSSRSTGGILDQSYKRVFS-PKATISKKPNRTP 166

Query: 154 KKISVSC 158
             + +SC
Sbjct: 168 SSV-LSC 166

[Close]

BLAST of CmaCh01G000920 vs. TAIR 10
Match: AT4G26288.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 (TAIR:AT5G56550.1); Has 289 Blast hits to 232 proteins in 41 species: Archae - 0; Bacteria - 12; Metazoa - 36; Fungi - 21; Plants - 151; Viruses - 2; Other Eukaryotes - 67 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 3.9e-10
Identity = 54/128 (42.19%), Postives = 76/128 (59.38%), Query Frame = 0


Query: 35  LASSTSSFEDSSNSSDDACSSTSNSSSPSIGALEDFTELFAQLPI----KRGLSMFYEGK 94
           ++SS+S    SS+ ++DA SS+S+SSS S G  +D ++L +QLPI    K GLS +Y+GK
Sbjct: 28  VSSSSSISMCSSDLTEDASSSSSSSSSSSNGPFDDLSDLISQLPIIQVKKGGLSKYYKGK 87

Query: 95  SQSFTSLSSVRSIEDLPKKRSPYSSRLSGC--KSYAGGLDTHKCAAYTLPKAPSFKKASS 154
           SQSFTSL++V S++DL K+     SR   C  + Y  G           PKA    KA+ 
Sbjct: 88  SQSFTSLANVTSLQDLVKR----GSRTKSCCKRDYFYG-----------PKATISMKATR 140

Query: 155 SSKKISVS 157
           +S K S S
Sbjct: 148 TSSKHSNS 140

[Close]

BLAST of CmaCh01G000920 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 2.2e-05
Identity = 38/84 (45.24%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 35  LASSTSSFEDSSNSSDDACSSTSNSSSPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSF 94
           L+SSTSS     NS DD        SS + G L+    L   LPIKR +S FY+GKS+SF
Sbjct: 21  LSSSTSSDSIGENSDDDEGGENEIESSYN-GPLDMMESLEEALPIKRAISKFYKGKSKSF 80

Query: 95  TSLSSVRS--IEDLPKKRSPYSSR 117
            SLS   S  ++DL K  + YS R
Sbjct: 81  MSLSETSSLPVKDLTKPENLYSRR 103

[Close]

BLAST of CmaCh01G000920 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 2.5e-04
Identity = 31/84 (36.90%), Postives = 45/84 (53.57%), Query Frame = 0


Query: 43  EDSSNSSDDACSSTSNS--SSPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSFT----- 102
           +D   SS+D       +   SP  G LE    L   LP+++G+S +Y GKS+SFT     
Sbjct: 49  DDGEKSSEDGGDDAGENEVESPYKGPLEMMESLEQVLPVRKGISKYYSGKSKSFTNLTAE 108

Query: 103 ---SLSSVRSIEDLPKKRSPYSSR 117
              +L+S  S++DL K  +PYS R
Sbjct: 109 AASALTSSSSMKDLAKPENPYSRR 132

[Close]

BLAST of CmaCh01G000920 vs. TAIR 10
Match: AT5G24890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 3.2e-04
Identity = 26/74 (35.14%), Postives = 42/74 (56.76%), Query Frame = 0


Query: 43  EDSSNSSDDACSSTSNSSSPSIGALEDFTELFAQLPIKRGLSMFYEGKSQSFTSLSSVRS 102
           E+S N +DD      +S    +  L   + L   LP KRGLS  Y+GKS+SF +L  + S
Sbjct: 76  EESENENDDV-----SSKELGLRGLASMSSLEDSLPSKRGLSNHYKGKSKSFGNLGEIGS 135

Query: 103 IEDLPKKRSPYSSR 117
           ++++ K+ +P + R
Sbjct: 136 VKEVAKQENPLNKR 144

The following BLAST results are available for this feature:

BLAST of CmaCh01G000920 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh01G000920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KCR8	5.4e-84	100.00	uncharacterized protein LOC111492699 OS=Cucurbita maxima OX=3661 GN=LOC111492699...	[more]
A0A6J1GAT2	1.2e-72	92.68	uncharacterized protein LOC111452482 OS=Cucurbita moschata OX=3662 GN=LOC1114524...	[more]
A0A5D3CBD2	1.4e-47	72.61	Oxidative stress 3, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BH50	1.4e-47	72.61	uncharacterized protein LOC103489976 OS=Cucumis melo OX=3656 GN=LOC103489976 PE=...	[more]
A0A6J1DLD1	2.6e-46	70.63	uncharacterized protein LOC111021114 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]

BLAST of CmaCh01G000920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997869.1	1.1e-83	100.00	uncharacterized protein LOC111492699 [Cucurbita maxima]	[more]
XP_023524906.1	2.7e-77	94.05	uncharacterized protein LOC111788696 [Cucurbita pepo subsp. pepo]	[more]
KAG7036459.1	3.3e-75	93.37	hypothetical protein SDJN02_00076 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6606744.1	5.6e-75	93.33	hypothetical protein SDJN03_00086, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022949011.1	2.6e-72	92.68	uncharacterized protein LOC111452482 [Cucurbita moschata]	[more]

BLAST of CmaCh01G000920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56550.1	1.9e-12	42.52	oxidative stress 3	[more]
AT4G26288.1	3.9e-10	42.19	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT3G43850.1	2.2e-05	45.24	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G21940.1	2.5e-04	36.90	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G24890.1	3.2e-04	35.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 160..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..163
None	No IPR available	PANTHER	PTHR33172	OS08G0516900 PROTEIN	coord: 33..155
None	No IPR available	PANTHER	PTHR33172:SF45	EMB\|CAB83157.1	coord: 33..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G000920.1	CmaCh01G000920.1	mRNA