CmaCh01G000690 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G000690
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	PRA1 family protein
Location	Cma_Chr01: 297073 .. 299349 (+)
RNA-Seq Expression	CmaCh01G000690
Synteny	CmaCh01G000690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGACGGTAACTTCGAGCGTGCCGTGGAAGAACGTATGCTCTCCCTGAACTGTCATAACTTGAAACAATTTTGTAGCAGAGTGAGTGAAAGGAAGAAGGGAGAATATGAGAAGTTCTATTCAGGAATTTGACGTGTGTCTTAAATAAGAAATGATAAGGTAGGTGCTGGAATTAGATAAGCAAGAAAGGAGGAGAGTTAGCTTGGAATTGAATGCAAAGGGTCTGAATGGAAGTTGGAAAAACTTGTGGAATTTTCCATGTCAATCTTAGAGGTAACCTATTGGCCACTATTTTATGCTTCAAGCCCAATTCTGTTCAACTCCAATCACATTTTTCATTTCTTCCCTTCAACACCATACCTCTCTTCTTTTTCCCAACGGAATTAAACCCTATCTGATTACGTGATTAATCCCGTATTAACCTACTAGGAAGAACAATAATTTGGTATGACCGTTCATTTGTGACCATATACTAAAGAAGTAATTAGGCTTCTTATGATATCACATTACCCCAATTGGTCTTTGTGTGAACAAGAAGTCGTTTTGTCTTTTAGGTTAATAATATTAAGTAGAATAATAATAGATTAAAAATTAATGAAAGTTAAGATTTGAAATAAACAAAAGAAGGCCCAAGCCCAAGCCCAAGCCCAAGCCCTTAGGTCCAATTGAACCGAGGTTGGTCAAGTAACATGTCATTATTTAAGAGAAATTATTCAAATAAGAAAGAGTATAAATATGTCGAAAATAAATAATAATTGAAAGGAAACAATAAGAATGCAACATGGGGAATTGGGGAAGTTGTTCGTTTCCATTTGGTATTTTCCTTCTATGATATATTTGATTATTTATTTATTTATTGAAAAACAAAGCAAGAAGGACTATATTGCCGAAAGCATGTGCTTGTTGGTACAAGTGGCACTTCACCAGGTATACCCTACATCCACGTGGCTCTTTCCCATTCGCTCCCTTATACTAGTTTAAGTCATAATTATTGTAATGCTTAGATTTGCATCATAAAATAAGTCACTAGAATTGTAAGTCATAATCGTTTAATTTCAACCTATCTATCTCACGTCAACCGATCTCACATCTTTGCTGGCTTTCTTGGGCTCTTCTACGCCGTCCTGTTATTATAATTGCCTTTGTTGTCCCCACGAAGCTTAGTGTGGTCTTGTCCACACTAGAGTCCAACCCATATCTTGTTTCAAATAGTGGTTGAATGTGTTGGATTTAATTTCTTTATTCAAGGAGGATGGAATCACCTATGCTCACTCCCATGCACATTTTTCATTTTCTTTCTAAAAAGTTAGTTTTTGTGATGGTTCAATTATACTCACTAAAACCAGAATTATTTTCAATGGTTTAGATGGTTTTAAAGTGGGCTCAAAAAGACTCTTTCAAAACTATTATAATTGAGCGACCGTGTAACTTTTTTAAGGGTTTAAAAACAAATTTAAGAGTGTTTTTATGCCTTTTTCTTCTTTTTTTTTTTTTTTATTTAAGAAAATTAAATAAGCTCCAGAAATGGAGGAATAGAAAGTATAATTGCATAATTTAATATATAAATTAAATTTGAATAAAATAAAATAAAATGAATAAATGGGTCAATTTATTGGCGTAGTAATCAGTGTTGATTTCAGATCCCTCATCATTTTCTTCATCTCTGTCAATCTCCAATTCTCCCAAAACCCAGTCAAAACCAAACCCCCTTCCTTCTCCGGCGGCATAATCATGACCTACGGCACCATTCCGACCTCCTCCGCCACTGCCGCCGCAAACCTCGAATACATTTCCCGCGCTAAACAGCGCTTCAAAGACGGCCTTGGCCACCGCCGTCCATGGCGTCTAATCGCCGACTACCGCTCCTTCACTCTCCCTTCCAACCTCCACGACACTCTCGCTCGCATCAAAGTCAACCTCGCTTACTTCCGTATGAACTACGCCATCGTCGTACTCGTAATCCTCTTCCTCGCCCTCCTCTGGCATCCGATTTCCCTCATCGTCCTCATCGTCATGATGACCCTCTGGCTCTTCCTCTACTTCCTCCGCGATCAGCCTCTCATTCTCGCCGGCCGCGTCGTCGAGGACTGGGTGATTCTCCTCATTCTCTCGATTTTCACTATCGGCTTCTTGTTCTTGACCAACGCCACGCTCAACATTGTCATCGCGCTTCTGATTGGCGCCATCGTCGTTGTGGCGCACGCCGCCGTGAGGAAAACAGAGAATCTCTACTTGGATGAAGAAGCTGCTGGATTGATGGCTCCTGGATCGTGA

mRNA sequence

ATGGAAGACGGTAACTTCGAGCGTGCCGTGGAAGAACTAATCAGTGTTGATTTCAGATCCCTCATCATTTTCTTCATCTCTGTCAATCTCCAATTCTCCCAAAACCCAGTCAAAACCAAACCCCCTTCCTTCTCCGGCGGCATAATCATGACCTACGGCACCATTCCGACCTCCTCCGCCACTGCCGCCGCAAACCTCGAATACATTTCCCGCGCTAAACAGCGCTTCAAAGACGGCCTTGGCCACCGCCGTCCATGGCGTCTAATCGCCGACTACCGCTCCTTCACTCTCCCTTCCAACCTCCACGACACTCTCGCTCGCATCAAAGTCAACCTCGCTTACTTCCGTATGAACTACGCCATCGTCGTACTCGTAATCCTCTTCCTCGCCCTCCTCTGGCATCCGATTTCCCTCATCGTCCTCATCGTCATGATGACCCTCTGGCTCTTCCTCTACTTCCTCCGCGATCAGCCTCTCATTCTCGCCGGCCGCGTCGTCGAGGACTGGGTGATTCTCCTCATTCTCTCGATTTTCACTATCGGCTTCTTGTTCTTGACCAACGCCACGCTCAACATTGTCATCGCGCTTCTGATTGGCGCCATCGTCGTTGTGGCGCACGCCGCCGTGAGGAAAACAGAGAATCTCTACTTGGATGAAGAAGCTGCTGGATTGATGGCTCCTGGATCGTGA

Coding sequence (CDS)

ATGGAAGACGGTAACTTCGAGCGTGCCGTGGAAGAACTAATCAGTGTTGATTTCAGATCCCTCATCATTTTCTTCATCTCTGTCAATCTCCAATTCTCCCAAAACCCAGTCAAAACCAAACCCCCTTCCTTCTCCGGCGGCATAATCATGACCTACGGCACCATTCCGACCTCCTCCGCCACTGCCGCCGCAAACCTCGAATACATTTCCCGCGCTAAACAGCGCTTCAAAGACGGCCTTGGCCACCGCCGTCCATGGCGTCTAATCGCCGACTACCGCTCCTTCACTCTCCCTTCCAACCTCCACGACACTCTCGCTCGCATCAAAGTCAACCTCGCTTACTTCCGTATGAACTACGCCATCGTCGTACTCGTAATCCTCTTCCTCGCCCTCCTCTGGCATCCGATTTCCCTCATCGTCCTCATCGTCATGATGACCCTCTGGCTCTTCCTCTACTTCCTCCGCGATCAGCCTCTCATTCTCGCCGGCCGCGTCGTCGAGGACTGGGTGATTCTCCTCATTCTCTCGATTTTCACTATCGGCTTCTTGTTCTTGACCAACGCCACGCTCAACATTGTCATCGCGCTTCTGATTGGCGCCATCGTCGTTGTGGCGCACGCCGCCGTGAGGAAAACAGAGAATCTCTACTTGGATGAAGAAGCTGCTGGATTGATGGCTCCTGGATCGTGA

Protein sequence

MEDGNFERAVEELISVDFRSLIIFFISVNLQFSQNPVKTKPPSFSGGIIMTYGTIPTSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKVNLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDWVILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS

Homology

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BLAST of CmaCh01G000690 vs. ExPASy Swiss-Prot
Match: Q9C889 (PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.1e-42
Identity = 97/174 (55.75%), Postives = 130/174 (74.71%), Query Frame = 0


Query: 52  YGTIPTSS-ATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKV 111
           YG IPTSS  + A +LEYISRAK R K GL  RRPW+ + D+ S TLP    D ++RIK 
Sbjct: 4   YGAIPTSSHPSPAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKT 63

Query: 112 NLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDWV 171
           NL YFR NYAI VL ILFL+LL+HP SLIVL +++  W+FLYFLRD+PL++ G  ++D  
Sbjct: 64  NLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRT 123

Query: 172 ILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGL 225
           +L+ LS+ T+  L LT+AT NI+ +LL  A++V+ HAAVR+++NL+LDEEAA +
Sbjct: 124 VLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAV 177

[Close]

BLAST of CmaCh01G000690 vs. ExPASy Swiss-Prot
Match: Q9LIC6 (PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.1e-42
Identity = 95/172 (55.23%), Postives = 128/172 (74.42%), Query Frame = 0


Query: 52  YGTIPTSS-ATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKV 111
           YG IPTSS A+   ++E +SRAK R K GL  RR WR++ D+ S  LP  + D   RIK 
Sbjct: 4   YGAIPTSSHASPLVDVESLSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKT 63

Query: 112 NLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDWV 171
           NLAYFRMNYAIVVL+++F +L+WHP SLIV  V++ +W+FLYFLRD+P+ L    ++D  
Sbjct: 64  NLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDRT 123

Query: 172 ILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAA 223
           +L++LS+ T+  L LTNAT NIV AL+ GA++V+ H+ VRKTE+L+LDEEAA
Sbjct: 124 VLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEEAA 175

[Close]

BLAST of CmaCh01G000690 vs. ExPASy Swiss-Prot
Match: Q9LIC7 (PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.2e-38
Identity = 92/166 (55.42%), Postives = 120/166 (72.29%), Query Frame = 0


Query: 57  TSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKVNLAYFR 116
           +S A+ A N E ISRAKQR KDGL  RR WR++ D  S  LP  + D  +RIK NLAYFR
Sbjct: 10  SSHASPAVNHESISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNLAYFR 69

Query: 117 MNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDWVILLILS 176
            NYAIV+L ++F +L+WHP SLIV   ++ LW+FLYFLRD PL +    ++D  +L+ LS
Sbjct: 70  SNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVLIGLS 129

Query: 177 IFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAA 223
           + TI  L LTNAT NIV AL+ GA++V+ HA +RKT++L+LDEEAA
Sbjct: 130 VITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEEAA 175

[Close]

BLAST of CmaCh01G000690 vs. ExPASy Swiss-Prot
Match: Q9FZ63 (PRA1 family protein F1 OS=Arabidopsis thaliana OX=3702 GN=PRA1F1 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.7e-35
Identity = 84/178 (47.19%), Postives = 120/178 (67.42%), Query Frame = 0


Query: 51  TYGTIPTSSATAAANLEYISRA-KQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIK 110
           TYGT   SS   A  LEYI+R   Q  + GL  RRPW+ + D  SF  P  L   + RI+
Sbjct: 3   TYGTNQKSSNDLAPKLEYITRGINQHKRSGLATRRPWKQMLDLGSFNFPRKLATVITRIR 62

Query: 111 VNLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDW 170
            N  YF+ NY IVVL  +FL+L+W+P SL+VL+ ++  WLFLYFLRD+PL +  R ++  
Sbjct: 63  ANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLRDEPLTVFDREIDHR 122

Query: 171 VILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAP 228
           ++L+I+S+ T+  LFLT+A LNI +A++ GA+ V++HAAVRKTE+L+  +E   L+ P
Sbjct: 123 IVLIIMSVITLSILFLTDAKLNIAVAIVAGALAVLSHAAVRKTEDLFQTDEETSLLNP 180

[Close]

BLAST of CmaCh01G000690 vs. ExPASy Swiss-Prot
Match: Q9FRR1 (PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-26
Identity = 75/195 (38.46%), Postives = 123/195 (63.08%), Query Frame = 0


Query: 40  KPPSFSGGIIMTYGTIPTSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPS 99
           KPP +  G     G  P+S++         +RAKQ  +  +   RPWR I D  + +LP 
Sbjct: 4   KPPPYGYGGAGGGGVGPSSTSNTTIIGTLSARAKQTTQSMITTLRPWREILDLSALSLPR 63

Query: 100 NLHDTLARIKVNLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRD--Q 159
              + +A +K N++YFR NYA+ VL I+FL L++HP+S+I  IV+   W+ LYF RD   
Sbjct: 64  GYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDAND 123

Query: 160 PLILAGRVVEDWVILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYL 219
            ++++G+ V+D ++L++LS+ T+  L  T+   N++++L+IG ++V AH A R T++L+L
Sbjct: 124 SIVISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFL 183

Query: 220 DEEAA---GLMAPGS 230
           DEE+A   GL++ GS
Sbjct: 184 DEESARRGGLVSAGS 198

[Close]

BLAST of CmaCh01G000690 vs. ExPASy TrEMBL
Match: A0A6J1K8D2 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111492618 PE=3 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 3.7e-107
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 13  LISVDFRSLIIFFISVNLQFSQNPVKTKPPSFSGGIIMTYGTIPTSSATAAANLEYISRA 72
           +ISVDFRSLIIFFISVNLQFSQNPVKTKPPSFSGGIIMTYGTIPTSSATAAANLEYISRA
Sbjct: 8   VISVDFRSLIIFFISVNLQFSQNPVKTKPPSFSGGIIMTYGTIPTSSATAAANLEYISRA 67

Query: 73  KQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKVNLAYFRMNYAIVVLVILFLALL 132
           KQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKVNLAYFRMNYAIVVLVILFLALL
Sbjct: 68  KQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKVNLAYFRMNYAIVVLVILFLALL 127

Query: 133 WHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDWVILLILSIFTIGFLFLTNATLNI 192
           WHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDWVILLILSIFTIGFLFLTNATLNI
Sbjct: 128 WHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDWVILLILSIFTIGFLFLTNATLNI 187

Query: 193 VIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS 230
           VIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS
Sbjct: 188 VIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS 224

[Close]

BLAST of CmaCh01G000690 vs. ExPASy TrEMBL
Match: A0A6J1GBU7 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111452555 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.6e-86
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 50  MTYGTIPTSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIK 109
           MTYGTIPTSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTL+RIK
Sbjct: 1   MTYGTIPTSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLSRIK 60

Query: 110 VNLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDW 169
           VNLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDW
Sbjct: 61  VNLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDW 120

Query: 170 VILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS 229
           VILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS
Sbjct: 121 VILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS 180

[Close]

BLAST of CmaCh01G000690 vs. ExPASy TrEMBL
Match: A0A6J1GW95 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111458066 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.7e-75
Identity = 154/180 (85.56%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 52  YGTIPTS--SATA-AANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARI 111
           YGTIPTS  +ATA AANLEYISRAKQRFKDGLGHRRPWRL+ADYRSFTLPSNLHDTLARI
Sbjct: 4   YGTIPTSYGAATATAANLEYISRAKQRFKDGLGHRRPWRLMADYRSFTLPSNLHDTLARI 63

Query: 112 KVNLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVED 171
           K+NLAYFRMNYAIV+L+ILFLALLWHPISLIV ++MM+LWLFLYFLRDQPL++AGRV++D
Sbjct: 64  KINLAYFRMNYAIVILIILFLALLWHPISLIVFVLMMSLWLFLYFLRDQPLVIAGRVLQD 123

Query: 172 WVILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPG 229
           W+ILL+LS+ TIGFLFLTNA+LNI+IAL+IGA+VV+AHAAVRKTENLYLDEEA GLMAPG
Sbjct: 124 WIILLVLSVLTIGFLFLTNASLNILIALIIGAVVVLAHAAVRKTENLYLDEEATGLMAPG 183

[Close]

BLAST of CmaCh01G000690 vs. ExPASy TrEMBL
Match: A0A6J1D4U6 (PRA1 family protein OS=Momordica charantia OX=3673 GN=LOC111016960 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 6.4e-75
Identity = 154/182 (84.62%), Postives = 170/182 (93.41%), Query Frame = 0


Query: 52  YGTIPTSSATA----AANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLAR 111
           YGTIPTSS+++    AANLEYISRAKQRFKDGLGHRRPWRL+ADYRSFTLPSNLHDTLAR
Sbjct: 4   YGTIPTSSSSSSPGVAANLEYISRAKQRFKDGLGHRRPWRLMADYRSFTLPSNLHDTLAR 63

Query: 112 IKVNLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVE 171
           I+ NL+YFRMNYAIV LVILF +LLWHPISLIVL +MM LWLFLYFLRD+PLIL GRV+E
Sbjct: 64  IRTNLSYFRMNYAIVFLVILFFSLLWHPISLIVLAIMMALWLFLYFLRDEPLILVGRVIE 123

Query: 172 DWVILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAP 230
           DW++LLILS+ TIGFLFLTNATLNIVIALLIGA++VVAHAAVRKTENLYLDEEAAGL+ P
Sbjct: 124 DWIVLLILSLLTIGFLFLTNATLNIVIALLIGAVLVVAHAAVRKTENLYLDEEAAGLIVP 183

[Close]

BLAST of CmaCh01G000690 vs. ExPASy TrEMBL
Match: A0A0A0LDF6 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_3G848860 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.9e-74
Identity = 154/179 (86.03%), Postives = 172/179 (96.09%), Query Frame = 0


Query: 52  YGTIPTSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKVN 111
           YGTIPTSSA AAANLEYISRAKQRFKDGLGHRRPWRLIADY SFTLPSNLHDTL+RIK+N
Sbjct: 4   YGTIPTSSA-AAANLEYISRAKQRFKDGLGHRRPWRLIADYHSFTLPSNLHDTLSRIKIN 63

Query: 112 LAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDWVI 171
           L YFRMNYAIVVLV+LFLALLWHPISL+VL +M++LWLFLYFLRDQPLILAGRV+EDW+I
Sbjct: 64  LTYFRMNYAIVVLVVLFLALLWHPISLLVLFLMLSLWLFLYFLRDQPLILAGRVLEDWII 123

Query: 172 LLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLD-EEAAGLMAPGS 230
           LL+LS+FT+GFLFLTNATLNI+IALL+GA +V+AHAAVRKT+NLYLD EEA GL+APGS
Sbjct: 124 LLLLSLFTLGFLFLTNATLNILIALLVGAALVLAHAAVRKTDNLYLDEEEATGLIAPGS 181

[Close]

BLAST of CmaCh01G000690 vs. NCBI nr
Match: XP_022997756.1 (PRA1 family protein F3-like [Cucurbita maxima])

HSP 1 Score: 397.5 bits (1020), Expect = 7.7e-107
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 13  LISVDFRSLIIFFISVNLQFSQNPVKTKPPSFSGGIIMTYGTIPTSSATAAANLEYISRA 72
           +ISVDFRSLIIFFISVNLQFSQNPVKTKPPSFSGGIIMTYGTIPTSSATAAANLEYISRA
Sbjct: 8   VISVDFRSLIIFFISVNLQFSQNPVKTKPPSFSGGIIMTYGTIPTSSATAAANLEYISRA 67

Query: 73  KQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKVNLAYFRMNYAIVVLVILFLALL 132
           KQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKVNLAYFRMNYAIVVLVILFLALL
Sbjct: 68  KQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKVNLAYFRMNYAIVVLVILFLALL 127

Query: 133 WHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDWVILLILSIFTIGFLFLTNATLNI 192
           WHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDWVILLILSIFTIGFLFLTNATLNI
Sbjct: 128 WHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDWVILLILSIFTIGFLFLTNATLNI 187

Query: 193 VIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS 230
           VIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS
Sbjct: 188 VIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS 224

[Close]

BLAST of CmaCh01G000690 vs. NCBI nr
Match: XP_023525376.1 (PRA1 family protein F3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.9 bits (842), Expect = 3.4e-86
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 50  MTYGTIPTSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIK 109
           MTYGTIPTSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIK
Sbjct: 1   MTYGTIPTSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIK 60

Query: 110 VNLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDW 169
           VNLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDW
Sbjct: 61  VNLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDW 120

Query: 170 VILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS 229
           VILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS
Sbjct: 121 VILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS 180

[Close]

BLAST of CmaCh01G000690 vs. NCBI nr
Match: XP_022949100.1 (PRA1 family protein F2-like [Cucurbita moschata] >KAG6606723.1 PRA1 family protein F2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 327.8 bits (839), Expect = 7.5e-86
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 50  MTYGTIPTSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIK 109
           MTYGTIPTSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTL+RIK
Sbjct: 1   MTYGTIPTSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLSRIK 60

Query: 110 VNLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDW 169
           VNLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDW
Sbjct: 61  VNLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDW 120

Query: 170 VILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS 229
           VILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS
Sbjct: 121 VILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS 180

[Close]

BLAST of CmaCh01G000690 vs. NCBI nr
Match: KAG7036438.1 (PRA1 family protein F2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 326.6 bits (836), Expect = 1.7e-85
Identity = 178/180 (98.89%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 50  MTYGTIPTSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIK 109
           MTYGTIPTSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTL+RIK
Sbjct: 1   MTYGTIPTSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLSRIK 60

Query: 110 VNLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDW 169
           VNLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDW
Sbjct: 61  VNLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDW 120

Query: 170 VILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS 229
           VILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAA+RKTENLYLDEEAAGLMAPGS
Sbjct: 121 VILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAMRKTENLYLDEEAAGLMAPGS 180

[Close]

BLAST of CmaCh01G000690 vs. NCBI nr
Match: XP_038899674.1 (PRA1 family protein F2 [Benincasa hispida])

HSP 1 Score: 298.1 bits (762), Expect = 6.4e-77
Identity = 159/178 (89.33%), Postives = 173/178 (97.19%), Query Frame = 0


Query: 52  YGTIPTSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKVN 111
           YGTIPTSSA AAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTL+RIK+N
Sbjct: 4   YGTIPTSSA-AAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLSRIKIN 63

Query: 112 LAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDWVI 171
           LAYFRMNYAIVVLVILFLALLWHPISL+VL +M++LWLFLYFLRDQPLILAGR++EDW+I
Sbjct: 64  LAYFRMNYAIVVLVILFLALLWHPISLLVLFLMLSLWLFLYFLRDQPLILAGRILEDWII 123

Query: 172 LLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAPGS 230
           LLILSI TIGFLFLTNATLNI+IALL+GA VV+AHAAVRKT+NLYLDEEA GL+APGS
Sbjct: 124 LLILSILTIGFLFLTNATLNILIALLVGAAVVLAHAAVRKTDNLYLDEEATGLIAPGS 180

[Close]

BLAST of CmaCh01G000690 vs. TAIR 10
Match: AT1G55190.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 173.3 bits (438), Expect = 2.2e-43
Identity = 97/174 (55.75%), Postives = 130/174 (74.71%), Query Frame = 0


Query: 52  YGTIPTSS-ATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKV 111
           YG IPTSS  + A +LEYISRAK R K GL  RRPW+ + D+ S TLP    D ++RIK 
Sbjct: 4   YGAIPTSSHPSPAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKT 63

Query: 112 NLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDWV 171
           NL YFR NYAI VL ILFL+LL+HP SLIVL +++  W+FLYFLRD+PL++ G  ++D  
Sbjct: 64  NLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRT 123

Query: 172 ILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGL 225
           +L+ LS+ T+  L LT+AT NI+ +LL  A++V+ HAAVR+++NL+LDEEAA +
Sbjct: 124 VLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAV 177

[Close]

BLAST of CmaCh01G000690 vs. TAIR 10
Match: AT3G13720.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 173.3 bits (438), Expect = 2.2e-43
Identity = 95/172 (55.23%), Postives = 128/172 (74.42%), Query Frame = 0


Query: 52  YGTIPTSS-ATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKV 111
           YG IPTSS A+   ++E +SRAK R K GL  RR WR++ D+ S  LP  + D   RIK 
Sbjct: 4   YGAIPTSSHASPLVDVESLSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKT 63

Query: 112 NLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDWV 171
           NLAYFRMNYAIVVL+++F +L+WHP SLIV  V++ +W+FLYFLRD+P+ L    ++D  
Sbjct: 64  NLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDRT 123

Query: 172 ILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAA 223
           +L++LS+ T+  L LTNAT NIV AL+ GA++V+ H+ VRKTE+L+LDEEAA
Sbjct: 124 VLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEEAA 175

[Close]

BLAST of CmaCh01G000690 vs. TAIR 10
Match: AT3G13710.1 (prenylated RAB acceptor 1.F4 )

HSP 1 Score: 161.4 bits (407), Expect = 8.7e-40
Identity = 92/166 (55.42%), Postives = 120/166 (72.29%), Query Frame = 0


Query: 57  TSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIKVNLAYFR 116
           +S A+ A N E ISRAKQR KDGL  RR WR++ D  S  LP  + D  +RIK NLAYFR
Sbjct: 10  SSHASPAVNHESISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNLAYFR 69

Query: 117 MNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDWVILLILS 176
            NYAIV+L ++F +L+WHP SLIV   ++ LW+FLYFLRD PL +    ++D  +L+ LS
Sbjct: 70  SNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVLIGLS 129

Query: 177 IFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAA 223
           + TI  L LTNAT NIV AL+ GA++V+ HA +RKT++L+LDEEAA
Sbjct: 130 VITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEEAA 175

[Close]

BLAST of CmaCh01G000690 vs. TAIR 10
Match: AT1G17700.1 (prenylated RAB acceptor 1.F1 )

HSP 1 Score: 151.0 bits (380), Expect = 1.2e-36
Identity = 84/178 (47.19%), Postives = 120/178 (67.42%), Query Frame = 0


Query: 51  TYGTIPTSSATAAANLEYISRA-KQRFKDGLGHRRPWRLIADYRSFTLPSNLHDTLARIK 110
           TYGT   SS   A  LEYI+R   Q  + GL  RRPW+ + D  SF  P  L   + RI+
Sbjct: 3   TYGTNQKSSNDLAPKLEYITRGINQHKRSGLATRRPWKQMLDLGSFNFPRKLATVITRIR 62

Query: 111 VNLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRDQPLILAGRVVEDW 170
            N  YF+ NY IVVL  +FL+L+W+P SL+VL+ ++  WLFLYFLRD+PL +  R ++  
Sbjct: 63  ANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLRDEPLTVFDREIDHR 122

Query: 171 VILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYLDEEAAGLMAP 228
           ++L+I+S+ T+  LFLT+A LNI +A++ GA+ V++HAAVRKTE+L+  +E   L+ P
Sbjct: 123 IVLIIMSVITLSILFLTDAKLNIAVAIVAGALAVLSHAAVRKTEDLFQTDEETSLLNP 180

[Close]

BLAST of CmaCh01G000690 vs. TAIR 10
Match: AT1G08770.1 (prenylated RAB acceptor 1.E )

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-27
Identity = 75/195 (38.46%), Postives = 123/195 (63.08%), Query Frame = 0


Query: 40  KPPSFSGGIIMTYGTIPTSSATAAANLEYISRAKQRFKDGLGHRRPWRLIADYRSFTLPS 99
           KPP +  G     G  P+S++         +RAKQ  +  +   RPWR I D  + +LP 
Sbjct: 4   KPPPYGYGGAGGGGVGPSSTSNTTIIGTLSARAKQTTQSMITTLRPWREILDLSALSLPR 63

Query: 100 NLHDTLARIKVNLAYFRMNYAIVVLVILFLALLWHPISLIVLIVMMTLWLFLYFLRD--Q 159
              + +A +K N++YFR NYA+ VL I+FL L++HP+S+I  IV+   W+ LYF RD   
Sbjct: 64  GYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDAND 123

Query: 160 PLILAGRVVEDWVILLILSIFTIGFLFLTNATLNIVIALLIGAIVVVAHAAVRKTENLYL 219
            ++++G+ V+D ++L++LS+ T+  L  T+   N++++L+IG ++V AH A R T++L+L
Sbjct: 124 SIVISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFL 183

Query: 220 DEEAA---GLMAPGS 230
           DEE+A   GL++ GS
Sbjct: 184 DEESARRGGLVSAGS 198

The following BLAST results are available for this feature:

BLAST of CmaCh01G000690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C889	3.1e-42	55.75	PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1	[more]
Q9LIC6	3.1e-42	55.23	PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1	[more]
Q9LIC7	1.2e-38	55.42	PRA1 family protein F4 OS=Arabidopsis thaliana OX=3702 GN=PRA1F4 PE=2 SV=1	[more]
Q9FZ63	1.7e-35	47.19	PRA1 family protein F1 OS=Arabidopsis thaliana OX=3702 GN=PRA1F1 PE=1 SV=1	[more]
Q9FRR1	1.8e-26	38.46	PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1	[more]

BLAST of CmaCh01G000690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K8D2	3.7e-107	99.54	PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111492618 PE=3 SV=1	[more]
A0A6J1GBU7	3.6e-86	99.44	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111452555 PE=3 SV=1	[more]
A0A6J1GW95	1.7e-75	85.56	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111458066 PE=3 SV=1	[more]
A0A6J1D4U6	6.4e-75	84.62	PRA1 family protein OS=Momordica charantia OX=3673 GN=LOC111016960 PE=3 SV=1	[more]
A0A0A0LDF6	1.9e-74	86.03	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_3G848860 PE=3 SV=1	[more]

BLAST of CmaCh01G000690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997756.1	7.7e-107	99.54	PRA1 family protein F3-like [Cucurbita maxima]	[more]
XP_023525376.1	3.4e-86	100.00	PRA1 family protein F3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949100.1	7.5e-86	99.44	PRA1 family protein F2-like [Cucurbita moschata] >KAG6606723.1 PRA1 family prote...	[more]
KAG7036438.1	1.7e-85	98.89	PRA1 family protein F2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038899674.1	6.4e-77	89.33	PRA1 family protein F2 [Benincasa hispida]	[more]

BLAST of CmaCh01G000690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55190.1	2.2e-43	55.75	PRA1 (Prenylated rab acceptor) family protein	[more]
AT3G13720.1	2.2e-43	55.23	PRA1 (Prenylated rab acceptor) family protein	[more]
AT3G13710.1	8.7e-40	55.42	prenylated RAB acceptor 1.F4	[more]
AT1G17700.1	1.2e-36	47.19	prenylated RAB acceptor 1.F1	[more]
AT1G08770.1	1.3e-27	38.46	prenylated RAB acceptor 1.E	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 80..220 e-value: 5.6E-43 score: 146.0
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 50..225
None	No IPR available	PANTHER	PTHR19317:SF2	PRA1 FAMILY PROTEIN F2	coord: 50..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G000690.1	CmaCh01G000690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane