CmaCh00G005470 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTTTGGCAAGCAGGGGAGATGGGACAGTTGGAGCGACGAATATGAGCACCAAAAGGACGAGGAGTTGGATAATGATAGCACAAAACGGCCTTATGAGTGCACATTTTGTAAGCGTGGGTTCACCAACGCACAAGCTCTTGGTGGCCATATGAACATCCACCGCAAAGACAGAGCCAAAGCCAAACACCGCACCTCTTCCTCCCATTCTAACCACCAAATTTTCCCTCATCTGTCAACCCAACCCACTGCCCCTCTACCACCCTCTTACCGGATGTATTTCGACACGACGGCGGCGGCCATGGCGTCGAACTTCCCGATTCACCAACAGAGATCGGAGAGTGTGAGTGAAGAGCTGCTGCTGGGGGCAAATCTTAGCCTCCAAGTTGATCAAAACAGGGGTGTGTGGAAAAATGAAGAGGTTGATTTGGAGCTGCGATTAGGGCATGAATATCGCTGA ATGGATTTTGGCAAGCAGGGGAGATGGGACAGTTGGAGCGACGAATATGAGCACCAAAAGGACGAGGAGTTGGATAATGATAGCACAAAACGGCCTTATGAGTGCACATTTTGTAAGCGTGGGTTCACCAACGCACAAGCTCTTGGTGGCCATATGAACATCCACCGCAAAGACAGAGCCAAAGCCAAACACCGCACCTCTTCCTCCCATTCTAACCACCAAATTTTCCCTCATCTGTCAACCCAACCCACTGCCCCTCTACCACCCTCTTACCGGATGTATTTCGACACGACGGCGGCGGCCATGGCGTCGAACTTCCCGATTCACCAACAGAGATCGGAGAGTGTGAGTGAAGAGCTGCTGCTGGGGGCAAATCTTAGCCTCCAAGTTGATCAAAACAGGGGTGTGTGGAAAAATGAAGAGGTTGATTTGGAGCTGCGATTAGGGCATGAATATCGCTGA ATGGATTTTGGCAAGCAGGGGAGATGGGACAGTTGGAGCGACGAATATGAGCACCAAAAGGACGAGGAGTTGGATAATGATAGCACAAAACGGCCTTATGAGTGCACATTTTGTAAGCGTGGGTTCACCAACGCACAAGCTCTTGGTGGCCATATGAACATCCACCGCAAAGACAGAGCCAAAGCCAAACACCGCACCTCTTCCTCCCATTCTAACCACCAAATTTTCCCTCATCTGTCAACCCAACCCACTGCCCCTCTACCACCCTCTTACCGGATGTATTTCGACACGACGGCGGCGGCCATGGCGTCGAACTTCCCGATTCACCAACAGAGATCGGAGAGTGTGAGTGAAGAGCTGCTGCTGGGGGCAAATCTTAGCCTCCAAGTTGATCAAAACAGGGGTGTGTGGAAAAATGAAGAGGTTGATTTGGAGCTGCGATTAGGGCATGAATATCGCTGA MDFGKQGRWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRTSSSHSNHQIFPHLSTQPTAPLPPSYRMYFDTTAAAMASNFPIHQQRSESVSEELLLGANLSLQVDQNRGVWKNEEVDLELRLGHEYR Homology
BLAST of CmaCh00G005470 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 5.7e-08 Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = 0
BLAST of CmaCh00G005470 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2) HSP 1 Score: 58.2 bits (139), Expect = 9.7e-08 Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 0
BLAST of CmaCh00G005470 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.2e-07 Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 0
BLAST of CmaCh00G005470 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.8e-07 Identity = 41/112 (36.61%), Postives = 57/112 (50.89%), Query Frame = 0
BLAST of CmaCh00G005470 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.1e-06 Identity = 49/165 (29.70%), Postives = 73/165 (44.24%), Query Frame = 0
BLAST of CmaCh00G005470 vs. ExPASy TrEMBL
Match: A0A6J1IGJ1 (zinc finger protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111474605 PE=4 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 7.3e-83 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of CmaCh00G005470 vs. ExPASy TrEMBL
Match: A0A6J1GCF2 (transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC111452897 PE=4 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 1.1e-78 Identity = 145/153 (94.77%), Postives = 150/153 (98.04%), Query Frame = 0
BLAST of CmaCh00G005470 vs. ExPASy TrEMBL
Match: A0A1S3AZA2 (zinc finger protein 7 OS=Cucumis melo OX=3656 GN=LOC103484178 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 1.3e-52 Identity = 119/173 (68.79%), Postives = 130/173 (75.14%), Query Frame = 0
BLAST of CmaCh00G005470 vs. ExPASy TrEMBL
Match: A0A6J1DD81 (zinc finger protein 8-like OS=Momordica charantia OX=3673 GN=LOC111019412 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 6.3e-50 Identity = 114/168 (67.86%), Postives = 130/168 (77.38%), Query Frame = 0
BLAST of CmaCh00G005470 vs. ExPASy TrEMBL
Match: A0A6J1E9V2 (transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC111432102 PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 2.4e-49 Identity = 115/174 (66.09%), Postives = 124/174 (71.26%), Query Frame = 0
BLAST of CmaCh00G005470 vs. NCBI nr
Match: XP_022975340.1 (zinc finger protein 11-like [Cucurbita maxima] >XP_022975370.1 zinc finger protein 11-like [Cucurbita maxima]) HSP 1 Score: 316.2 bits (809), Expect = 1.5e-82 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of CmaCh00G005470 vs. NCBI nr
Match: XP_023539405.1 (zinc finger protein 11-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 307.0 bits (785), Expect = 9.2e-80 Identity = 147/153 (96.08%), Postives = 151/153 (98.69%), Query Frame = 0
BLAST of CmaCh00G005470 vs. NCBI nr
Match: KAG7028842.1 (Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 306.6 bits (784), Expect = 1.2e-79 Identity = 147/153 (96.08%), Postives = 151/153 (98.69%), Query Frame = 0
BLAST of CmaCh00G005470 vs. NCBI nr
Match: KAG6597383.1 (Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 305.4 bits (781), Expect = 2.7e-79 Identity = 146/153 (95.42%), Postives = 151/153 (98.69%), Query Frame = 0
BLAST of CmaCh00G005470 vs. NCBI nr
Match: XP_022949591.1 (transcriptional regulator SUPERMAN-like [Cucurbita moschata]) HSP 1 Score: 302.4 bits (773), Expect = 2.3e-78 Identity = 145/153 (94.77%), Postives = 150/153 (98.04%), Query Frame = 0
BLAST of CmaCh00G005470 vs. TAIR 10
Match: AT5G43540.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 68.6 bits (166), Expect = 5.1e-12 Identity = 50/125 (40.00%), Postives = 64/125 (51.20%), Query Frame = 0
BLAST of CmaCh00G005470 vs. TAIR 10
Match: AT3G23140.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 4.8e-10 Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 0
BLAST of CmaCh00G005470 vs. TAIR 10
Match: AT3G53820.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 61.6 bits (148), Expect = 6.3e-10 Identity = 43/124 (34.68%), Postives = 57/124 (45.97%), Query Frame = 0
BLAST of CmaCh00G005470 vs. TAIR 10
Match: AT3G09290.1 (telomerase activator1 ) HSP 1 Score: 58.9 bits (141), Expect = 4.1e-09 Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = 0
BLAST of CmaCh00G005470 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 58.2 bits (139), Expect = 6.9e-09 Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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