CmaCh00G004990 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh00G004990
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Alba domain-containing protein
Location	Cma_Chr00: 36116446 .. 36117382 (-)
RNA-Seq Expression	CmaCh00G004990
Synteny	CmaCh00G004990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATAAACTACTCCTGCAATTCGATTCCATTCTGCCAAACTTCTTCTCAATTTGTGTAGTAGAAATACAGTTTTCTTTCAGCGATTCGGCAATGGAGTCCGGCATGGTCATCTTAGAAGCTACTACTGAGGTTAAGAATGCAATCCGTAATGAGGACGAAAAGCTCCTCGTCGTTTGTCCCCGATGGTGAGGTTAAGGAGATTGCTGTATTGACCGAGTTTAAGAAGAAGAAGAAGAACCAAATTCAGGTTTCCAATGTCAAGAAGCCGTTCTTCTACTACTACAATCTTTCTAAGGTATTCTTTTGTTGCTTCCGTAAGATCTTGTTTGTCCAAACCACGATATGGAAACACCGTTGAACGACTTCTCTATTTAGCTTCATCTTTAGAAAATCAAAATCTGGATTGATTTTACGTTTCGTTTTGTTGCAGAGGTACATTAAGCAGTTCAACGAAGTTGAGCTCTCAGCCTTGGGGATGGGTACAAGTTCTTGAATCCTTTCTTTTTTTCACTACTAGTTCACAATTCGATTTAAATAACTGGTACGACTTCCATTGATTCATGGAATACAGCTATACCAACTGTAGTGATGATTTCTGAGATTCTGAAGAAGAATGGATTGGCATTGGAAAAGAGTAAGAAAATTTATCGAATCCGTTGCCATTAAATCTCTGGGAATTTGGCACTCTCTAAACACTTGTTTGGAAAATAATCTGTAGACTTGACGATATCTTCTGTCAGTTTGAAGAATGGGGAAAACGAAAGGCTGGTAATGAAACCTAAGGTTAGTGCTAAGATTTTTGATCCACTGTTCAATTTTTTGGGTCTTTCGTTGGAGTTATGCGTTCTTTAACTTCTGATCTAGATTGAGATTTCACTAGTAAATGCAGAGAAGATCAAAAACATTACGACTGCTACAACGAGTAAAGATTGTTGA

mRNA sequence

TTATAAACTACTCCTGCAATTCGATTCCATTCTGCCAAACTTCTTCTCAATTTGTGTAGTAGAAATACAGTTTTCTTTCAGCGATTCGGCAATGGAGTCCGGCATGGTCATCTTAGAAGCTACTACTGAGGTTAAGAATGCAATCCGTAATGAGGACGAAAAGCTCCTCGTCGTTTGTCCCCGATGGTGAGGTTAAGGAGATTGCTGTATTGACCGAGTTTAAGAAGAAGAAGAAGAACCAAATTCAGGTTTCCAATGTCAAGAAGCCGTTCTTCTACTACTACAATCTTTCTAAGAGGTACATTAAGCAGTTCAACGAAGTTGAGCTCTCAGCCTTGGGGATGGCTATACCAACTGTAGTGATGATTTCTGAGATTCTGAAGAAGAATGGATTGGCATTGGAAAAGAACTTGACGATATCTTCTGTCAGTTTGAAGAATGGGGAAAACGAAAGGCTGGTAATGAAACCTAAGATTGAGATTTCACTAGTAAATGCAGAGAAGATCAAAAACATTACGACTGCTACAACGAGTAAAGATTGTTGA

Coding sequence (CDS)

ATGCAATCCGTAATGAGGACGAAAAGCTCCTCGTCGTTTGTCCCCGATGGTGAGGTTAAGGAGATTGCTGTATTGACCGAGTTTAAGAAGAAGAAGAAGAACCAAATTCAGGTTTCCAATGTCAAGAAGCCGTTCTTCTACTACTACAATCTTTCTAAGAGGTACATTAAGCAGTTCAACGAAGTTGAGCTCTCAGCCTTGGGGATGGCTATACCAACTGTAGTGATGATTTCTGAGATTCTGAAGAAGAATGGATTGGCATTGGAAAAGAACTTGACGATATCTTCTGTCAGTTTGAAGAATGGGGAAAACGAAAGGCTGGTAATGAAACCTAAGATTGAGATTTCACTAGTAAATGCAGAGAAGATCAAAAACATTACGACTGCTACAACGAGTAAAGATTGTTGA

Protein sequence

MQSVMRTKSSSSFVPDGEVKEIAVLTEFKKKKKNQIQVSNVKKPFFYYYNLSKRYIKQFNEVELSALGMAIPTVVMISEILKKNGLALEKNLTISSVSLKNGENERLVMKPKIEISLVNAEKIKNITTATTSKDC

Homology

[Close]

BLAST of CmaCh00G004990 vs. ExPASy Swiss-Prot
Match: O22969 (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.2e-23
Identity = 57/103 (55.34%), Postives = 76/103 (73.79%), Query Frame = 0


Query: 31  KKKNQIQVSNVKKPFFYYYNLSKRYIKQFNEVELSALGMAIPTVVMISEILKKNGLALEK 90
           +KKN+IQVSN KKP F+Y NL+KRY++Q+N+VELSALGMAI TVV ++EILK NG A+EK
Sbjct: 18  QKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEK 77

Query: 91  NLTISSVSLKNGENERLVMKPKIEISLVNAEKIKNITTATTSK 134
            +  S+V +K+    R V K KIEI+LV +EK   +  A   +
Sbjct: 78  KIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEE 120

[Close]

BLAST of CmaCh00G004990 vs. ExPASy TrEMBL
Match: A0A6J1D0Y9 (uncharacterized protein At2g34160-like OS=Momordica charantia OX=3673 GN=LOC111016353 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.6e-49
Identity = 113/137 (82.48%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 1   MQSVMRTKSSSSFV--PDGEVKEIAVLTEFKKKKKNQIQVSNVKKPFFYYYNLSKRYIKQ 60
           ++S +R ++    V  PDG+VKEIAVLTEF KKKKNQIQVSNVKKPFFYYYNLSKRYIKQ
Sbjct: 13  VKSEIRNENEKLLVVAPDGKVKEIAVLTEF-KKKKNQIQVSNVKKPFFYYYNLSKRYIKQ 72

Query: 61  FNEVELSALGMAIPTVVMISEILKKNGLALEKNLTISSVSLKNGENERLVMKPKIEISLV 120
           +NEVELSALGMAIPTVV I+EILKKNGLA EKNLTISSVSLKNGEN+RLVMKPKIEI+LV
Sbjct: 73  YNEVELSALGMAIPTVVTIAEILKKNGLASEKNLTISSVSLKNGENDRLVMKPKIEIALV 132

Query: 121 NAEKIKNITTATTSKDC 136
           NAEK KNI TATTS+DC
Sbjct: 133 NAEKTKNIMTATTSEDC 148

[Close]

BLAST of CmaCh00G004990 vs. ExPASy TrEMBL
Match: A0A6J1EFH1 (uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC111432040 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.8e-46
Identity = 104/120 (86.67%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 15  PDGEVKEIAVLTEFKKKKKNQIQVSNVKKPFFYYYNLSKRYIKQFNEVELSALGMAIPTV 74
           PDGEVKEIAVLTE  KKK+NQIQVSNVKKPFFYYYNLSKRYIKQ+NEVELSALGMAIPTV
Sbjct: 30  PDGEVKEIAVLTEI-KKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTV 89

Query: 75  VMISEILKKNGLALEKNLTISSVSLKNGENERLVMKPKIEISLVNAEKIKNITTATTSKD 134
           V I+EILKKNGLA +K LTISSVSLKNGEN+RLVMKPKIEI+L+NAEK+K I+TATTS+D
Sbjct: 90  VTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSED 148

[Close]

BLAST of CmaCh00G004990 vs. ExPASy TrEMBL
Match: A0A5D3CZ81 (Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001140 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.3e-46
Identity = 104/120 (86.67%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 15  PDGEVKEIAVLTEFKKKKKNQIQVSNVKKPFFYYYNLSKRYIKQFNEVELSALGMAIPTV 74
           PD EVKEIAVLTEF KKK+NQIQVSNVKKPFFYYYNLSKR+IKQ+NEVELSALGMAIPTV
Sbjct: 30  PDSEVKEIAVLTEF-KKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTV 89

Query: 75  VMISEILKKNGLALEKNLTISSVSLKNGENERLVMKPKIEISLVNAEKIKNITTATTSKD 134
           V I+EILK+NGLA +KNLTISSVSLKNGEN +LVMKPKIEI+LVNAEKIKNI+TA TS+D
Sbjct: 90  VTIAEILKRNGLAFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSED 148

[Close]

BLAST of CmaCh00G004990 vs. ExPASy TrEMBL
Match: A0A1S3AXD3 (uncharacterized protein At2g34160-like OS=Cucumis melo OX=3656 GN=LOC103483640 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.3e-46
Identity = 104/120 (86.67%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 15  PDGEVKEIAVLTEFKKKKKNQIQVSNVKKPFFYYYNLSKRYIKQFNEVELSALGMAIPTV 74
           PD EVKEIAVLTEF KKK+NQIQVSNVKKPFFYYYNLSKR+IKQ+NEVELSALGMAIPTV
Sbjct: 30  PDSEVKEIAVLTEF-KKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTV 89

Query: 75  VMISEILKKNGLALEKNLTISSVSLKNGENERLVMKPKIEISLVNAEKIKNITTATTSKD 134
           V I+EILK+NGLA +KNLTISSVSLKNGEN +LVMKPKIEI+LVNAEKIKNI+TA TS+D
Sbjct: 90  VTIAEILKRNGLAFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSED 148

[Close]

BLAST of CmaCh00G004990 vs. ExPASy TrEMBL
Match: A0A6J1IXN8 (uncharacterized protein At2g34160-like OS=Cucurbita maxima OX=3661 GN=LOC111480105 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.1e-45
Identity = 103/120 (85.83%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 15  PDGEVKEIAVLTEFKKKKKNQIQVSNVKKPFFYYYNLSKRYIKQFNEVELSALGMAIPTV 74
           PD EVKEIAVLTE  KKK+NQIQVSNVKKPFFYYYNLSKRYIKQ+NEVELSALGMAIPTV
Sbjct: 30  PDVEVKEIAVLTEI-KKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTV 89

Query: 75  VMISEILKKNGLALEKNLTISSVSLKNGENERLVMKPKIEISLVNAEKIKNITTATTSKD 134
           V I+EILKKNGLA +K LTISSVSLKNGEN+RLVMKPKIEI+L+NAEK+K I+TATTS+D
Sbjct: 90  VTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSED 148

[Close]

BLAST of CmaCh00G004990 vs. NCBI nr
Match: XP_022147424.1 (uncharacterized protein At2g34160-like [Momordica charantia])

HSP 1 Score: 204.1 bits (518), Expect = 7.4e-49
Identity = 113/137 (82.48%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 1   MQSVMRTKSSSSFV--PDGEVKEIAVLTEFKKKKKNQIQVSNVKKPFFYYYNLSKRYIKQ 60
           ++S +R ++    V  PDG+VKEIAVLTEF KKKKNQIQVSNVKKPFFYYYNLSKRYIKQ
Sbjct: 13  VKSEIRNENEKLLVVAPDGKVKEIAVLTEF-KKKKNQIQVSNVKKPFFYYYNLSKRYIKQ 72

Query: 61  FNEVELSALGMAIPTVVMISEILKKNGLALEKNLTISSVSLKNGENERLVMKPKIEISLV 120
           +NEVELSALGMAIPTVV I+EILKKNGLA EKNLTISSVSLKNGEN+RLVMKPKIEI+LV
Sbjct: 73  YNEVELSALGMAIPTVVTIAEILKKNGLASEKNLTISSVSLKNGENDRLVMKPKIEIALV 132

Query: 121 NAEKIKNITTATTSKDC 136
           NAEK KNI TATTS+DC
Sbjct: 133 NAEKTKNIMTATTSEDC 148

[Close]

BLAST of CmaCh00G004990 vs. NCBI nr
Match: XP_022924600.1 (uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023528324.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.5 bits (493), Expect = 5.9e-46
Identity = 104/120 (86.67%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 15  PDGEVKEIAVLTEFKKKKKNQIQVSNVKKPFFYYYNLSKRYIKQFNEVELSALGMAIPTV 74
           PDGEVKEIAVLTE  KKK+NQIQVSNVKKPFFYYYNLSKRYIKQ+NEVELSALGMAIPTV
Sbjct: 30  PDGEVKEIAVLTEI-KKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTV 89

Query: 75  VMISEILKKNGLALEKNLTISSVSLKNGENERLVMKPKIEISLVNAEKIKNITTATTSKD 134
           V I+EILKKNGLA +K LTISSVSLKNGEN+RLVMKPKIEI+L+NAEK+K I+TATTS+D
Sbjct: 90  VTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSED 148

[Close]

BLAST of CmaCh00G004990 vs. NCBI nr
Match: XP_008438573.1 (PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo] >KAA0049297.1 alba DNA/RNA-binding protein [Cucumis melo var. makuwa] >TYK17261.1 alba DNA/RNA-binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 193.4 bits (490), Expect = 1.3e-45
Identity = 104/120 (86.67%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 15  PDGEVKEIAVLTEFKKKKKNQIQVSNVKKPFFYYYNLSKRYIKQFNEVELSALGMAIPTV 74
           PD EVKEIAVLTEF KKK+NQIQVSNVKKPFFYYYNLSKR+IKQ+NEVELSALGMAIPTV
Sbjct: 30  PDSEVKEIAVLTEF-KKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTV 89

Query: 75  VMISEILKKNGLALEKNLTISSVSLKNGENERLVMKPKIEISLVNAEKIKNITTATTSKD 134
           V I+EILK+NGLA +KNLTISSVSLKNGEN +LVMKPKIEI+LVNAEKIKNI+TA TS+D
Sbjct: 90  VTIAEILKRNGLAFQKNLTISSVSLKNGENGKLVMKPKIEIALVNAEKIKNISTAPTSED 148

[Close]

BLAST of CmaCh00G004990 vs. NCBI nr
Match: XP_022980835.1 (uncharacterized protein At2g34160-like [Cucurbita maxima])

HSP 1 Score: 191.0 bits (484), Expect = 6.5e-45
Identity = 103/120 (85.83%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 15  PDGEVKEIAVLTEFKKKKKNQIQVSNVKKPFFYYYNLSKRYIKQFNEVELSALGMAIPTV 74
           PD EVKEIAVLTE  KKK+NQIQVSNVKKPFFYYYNLSKRYIKQ+NEVELSALGMAIPTV
Sbjct: 30  PDVEVKEIAVLTEI-KKKRNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTV 89

Query: 75  VMISEILKKNGLALEKNLTISSVSLKNGENERLVMKPKIEISLVNAEKIKNITTATTSKD 134
           V I+EILKKNGLA +K LTISSVSLKNGEN+RLVMKPKIEI+L+NAEK+K I+TATTS+D
Sbjct: 90  VTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMKPKIEIALINAEKMKKISTATTSED 148

[Close]

BLAST of CmaCh00G004990 vs. NCBI nr
Match: XP_038877187.1 (uncharacterized protein At2g34160-like [Benincasa hispida])

HSP 1 Score: 189.5 bits (480), Expect = 1.9e-44
Identity = 102/119 (85.71%), Postives = 113/119 (94.96%), Query Frame = 0


Query: 16  DGEVKEIAVLTEFKKKKKNQIQVSNVKKPFFYYYNLSKRYIKQFNEVELSALGMAIPTVV 75
           DGEVKEIAVLTEF KKK+NQIQVSNVKKPFFYYYNLSKR+IKQ+NEVELSALGMAIPTVV
Sbjct: 31  DGEVKEIAVLTEF-KKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVV 90

Query: 76  MISEILKKNGLALEKNLTISSVSLKNGENERLVMKPKIEISLVNAEKIKNITTATTSKD 135
            I+EILK+NGLA +K LTISSVSLK GEN++LVMKPKIEI+LVNAEKIKNI+TA TS+D
Sbjct: 91  TIAEILKRNGLAFQKTLTISSVSLKKGENDKLVMKPKIEIALVNAEKIKNISTAPTSED 148

[Close]

BLAST of CmaCh00G004990 vs. TAIR 10
Match: AT2G34160.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-24
Identity = 57/103 (55.34%), Postives = 76/103 (73.79%), Query Frame = 0


Query: 31  KKKNQIQVSNVKKPFFYYYNLSKRYIKQFNEVELSALGMAIPTVVMISEILKKNGLALEK 90
           +KKN+IQVSN KKP F+Y NL+KRY++Q+N+VELSALGMAI TVV ++EILK NG A+EK
Sbjct: 18  QKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEK 77

Query: 91  NLTISSVSLKNGENERLVMKPKIEISLVNAEKIKNITTATTSK 134
            +  S+V +K+    R V K KIEI+LV +EK   +  A   +
Sbjct: 78  KIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEE 120

[Close]

BLAST of CmaCh00G004990 vs. TAIR 10
Match: AT3G04620.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 107.5 bits (267), Expect = 8.8e-24
Identity = 59/101 (58.42%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 32  KKNQIQVSNVKKPFFYYYNLSKRYIKQFNEVELSALGMAIPTVVMISEILKKNGLALEKN 91
           KKN+IQVSN KKP F+Y NL+KRYI+Q NEVELSALGMAI TVV ISEILK NGLA EK 
Sbjct: 36  KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTISEILKNNGLATEKK 95

Query: 92  LTISSVSLKNGENERLVMKPKIEISLVNAEKIKNITTATTS 133
           +  S+V +K+    ++V K KIEI L  ++K  ++    T+
Sbjct: 96  VLTSTVGMKDETKGKMVQKAKIEIVLGKSDKFDSLVPPVTN 136

[Close]

BLAST of CmaCh00G004990 vs. TAIR 10
Match: AT1G29250.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 105.5 bits (262), Expect = 3.3e-23
Identity = 55/103 (53.40%), Postives = 74/103 (71.84%), Query Frame = 0


Query: 31  KKKNQIQVSNVKKPFFYYYNLSKRYIKQFNEVELSALGMAIPTVVMISEILKKNGLALEK 90
           +KKN+IQVSN KKP F+Y NL+KRY++Q+ +VELSALGMAI TVV ++EILK NG A+EK
Sbjct: 18  QKKNRIQVSNTKKPLFFYVNLAKRYMQQYTDVELSALGMAIATVVTVAEILKNNGFAVEK 77

Query: 91  NLTISSVSLKNGENERLVMKPKIEISLVNAEKIKNITTATTSK 134
            +  S+V +K+    R V K KIEI+L  +EK   +  A   +
Sbjct: 78  KIMTSTVDIKDDSRGRPVQKAKIEITLAKSEKFDELMAAANEE 120

The following BLAST results are available for this feature:

BLAST of CmaCh00G004990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22969	4.2e-23	55.34	Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 P...	[more]

BLAST of CmaCh00G004990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D0Y9	3.6e-49	82.48	uncharacterized protein At2g34160-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1EFH1	2.8e-46	86.67	uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A5D3CZ81	6.3e-46	86.67	Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3AXD3	6.3e-46	86.67	uncharacterized protein At2g34160-like OS=Cucumis melo OX=3656 GN=LOC103483640 P...	[more]
A0A6J1IXN8	3.1e-45	85.83	uncharacterized protein At2g34160-like OS=Cucurbita maxima OX=3661 GN=LOC1114801...	[more]

BLAST of CmaCh00G004990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147424.1	7.4e-49	82.48	uncharacterized protein At2g34160-like [Momordica charantia]	[more]
XP_022924600.1	5.9e-46	86.67	uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023528324.1 unch...	[more]
XP_008438573.1	1.3e-45	86.67	PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo] >KAA0049297.1 a...	[more]
XP_022980835.1	6.5e-45	85.83	uncharacterized protein At2g34160-like [Cucurbita maxima]	[more]
XP_038877187.1	1.9e-44	85.71	uncharacterized protein At2g34160-like [Benincasa hispida]	[more]

BLAST of CmaCh00G004990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34160.1	3.0e-24	55.34	Alba DNA/RNA-binding protein	[more]
AT3G04620.1	8.8e-24	58.42	Alba DNA/RNA-binding protein	[more]
AT1G29250.1	3.3e-23	53.40	Alba DNA/RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 32..134 e-value: 3.8E-36 score: 125.5
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 33..125
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 34..86 e-value: 6.0E-9 score: 35.6
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PANTHER	PTHR31947	DNA/RNA-BINDING PROTEIN ALBA 3	coord: 26..132
None	No IPR available	PANTHER	PTHR31947:SF19	ALBA DNA/RNA-BINDING PROTEIN	coord: 26..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G004990.1	CmaCh00G004990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding