CmaCh00G002520 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh00G002520
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic
Location	Cma_Chr00: 18316658 .. 18318361 (+)
RNA-Seq Expression	CmaCh00G002520
Synteny	CmaCh00G002520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAAAAGATCTTCTGCTTTATATGATTATCAATCAAATAAAAGATTCTTCTATGTAGCAATCCTTACATCTCCTACTACTAGTGGGGTGACAGCTAGTTTTGGTATCTTGGGGGATATCATTATTGCCGAACCCAATGCCTACATCGCATTTGCGGGTAAAAGAGTAATTTCTTGAACATTGATTGAATACGACAGTCCGTAGGGTTCCCAGGTGGCTGACGTTCAATAAGGGCTTATTCGATCTAAACCACGTAATCCTTTAAAAGGTGTTTGAGTGAGTTATTTCAGCTCCACGCTTTCGTTTCCTCGAATCAAAATTCAATCAAGTCAAACCTTACTTAAAACTCTTCCAAAATTCATTCTCAGTCTTTGTAACGAACAAGTAGTTATTTAGTTTATAGGAATCAAAGTCAAAATTCGCAGAATGGATTTTTCTTTGGTAACATAAGATGAAATTGTAGAAAGAATCATGCGGAGAAATGGGTTTGACCGATATTCCTGATTAGTAATTAGGAAGCCCCTATTAAATAAAAGAGCTAATTCTTTCTTCCGCTAAATTAGGCAAGAATAAAATGAATGAATTTCATGCTCCCTTCTTACATTACATGTGGATATATAATCCAACTATAGCAAATAGCGGCATAGAGTCTTGTATCTTTCTACATCTCTAGAGGATCTCTAGTTTGACTACGAGTCCCTGTTGTTGGATCGGATTGTAATGAACTTTTGGGTAACAAGTAGATATTACTTTGTGGAATTATATATGAATTAGTATAATTATCCGATACCTTTTATAAAAAGAAATAAATAACAGGTAAATTAATATAACAAGAAATAACAGGTATAAATATTAAGTCGAGGTATCCATTCTATGACAAACTTACTCTCTCTCTACTTTTGTGCCTTTAGTAGGCATAGTATTTCCGGCAATTGCAATGGCTTCTTTATCTCTTCATGTTCAAAAAAACAAAATTATTTATGCTACAAGTCTATTTGTTTTTTTCAAAACTTAGACTTTGACGATAACACAGCTATCTATTTAGTAGACGGCAGTCTAACATGTGGCTGACTCCAAACATAAGTGATTATACATGCGTAAACATGATATCTGAGGAAATGAATTAGAAAGTCTTTGAAAATCTCCAATAACAGATCGGGCGACGAATGGTTGAGATGTCAAATCAATATATCTATATGGATGTAGGTATCCATAGGGAATCATATAAAGGTGATGTTATTATTTGAGATCTAAGTAATTCGATGAGTTACTCCATTAGTCAAGGTTCACATCAAAATAGTGTTAGTTGATTAGAGTTACTTCGGAACAAAAAAAGTCAAATATCCACGTTATTCTATCAATTCCAATAAAATGCAACGAGATCTAGTATGAGTTGGCAATCAGAACGTACATGGATAGAATTTATAAGAACGAGGATCTCAAAAGCAATTTCCCATGGGCCTTTATCTATCCCCTTTTTTTAGGTTCATTAGGGTGTTGGTTGGAACTTCGAGTTGTCTTGCTTGGTAGGGATTTGATATCTTGATTTCCATCTCAACAAAGAATTTCTTTGTTTTCCACAGGGGATTGTAATGTCTTTCTATGAGATTGTAGGTCTCTTTATTAGCTCCTATTTATGGTGCACCATTTTGTGGAATGTAGGTAGTGGTTATGATCGATTCGATGGAAAAGAAGAAATAG

mRNA sequence

ATGTCAAAAAGATCTTCTGCTTTATATGATTATCAATCAAATAAAAGATTCTTCTATGTAGCAATCCTTACATCTCCTACTACTAGTGGGGTGACAGCTAGTTTTGGTATCTTGGGGGATATCATTATTGCCGAACCCAATGCCTACATCGCATTTGCGGTCCGTAGGGTTCCCAGGTGGCTGACGTTCAATAAGGGCTTATTCGATCTAAACCACGTAGTGGTTATGATCGATTCGATGGAAAAGAAGAAATAG

Coding sequence (CDS)

ATGTCAAAAAGATCTTCTGCTTTATATGATTATCAATCAAATAAAAGATTCTTCTATGTAGCAATCCTTACATCTCCTACTACTAGTGGGGTGACAGCTAGTTTTGGTATCTTGGGGGATATCATTATTGCCGAACCCAATGCCTACATCGCATTTGCGGTCCGTAGGGTTCCCAGGTGGCTGACGTTCAATAAGGGCTTATTCGATCTAAACCACGTAGTGGTTATGATCGATTCGATGGAAAAGAAGAAATAG

Protein sequence

MSKRSSALYDYQSNKRFFYVAILTSPTTSGVTASFGILGDIIIAEPNAYIAFAVRRVPRWLTFNKGLFDLNHVVVMIDSMEKKK

Homology

[Close]

BLAST of CmaCh00G002520 vs. ExPASy Swiss-Prot
Match: A0A344 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Coffea arabica OX=13443 GN=accD PE=3 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 3.6e-20
Identity = 55/84 (65.48%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 1   MSKRSSALYDYQSNKRFFYVAILTSPTTSGVTASFGILGDIIIAEPNAYIAFAVRRV--- 60
           M+K SSALYDYQSNK+ FYV+ILTSPTT GVTASFG+LGDIIIAEPNAYIAFA +RV   
Sbjct: 381 MAKISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQ 440

Query: 61  -----------PRWLTFNKGLFDL 71
                           F KGLFDL
Sbjct: 441 TLNTTVPEGSQAAEYLFQKGLFDL 464

[Close]

BLAST of CmaCh00G002520 vs. ExPASy Swiss-Prot
Match: Q0G9L0 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Liriodendron tulipifera OX=3415 GN=accD PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.6e-20
Identity = 54/83 (65.06%), Postives = 61/83 (73.49%), Query Frame = 0


Query: 1   MSKRSSALYDYQSNKRFFYVAILTSPTTSGVTASFGILGDIIIAEPNAYIAFAVRRV--- 60
           M+K SSALYDYQSNK+ FYV+ILTSPTT GVTASFG+LGDIIIAEPNAYIAFA +RV   
Sbjct: 379 MAKISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQ 438

Query: 61  -----------PRWLTFNKGLFD 70
                          +F+KGLFD
Sbjct: 439 TLNKTVPDGSQAAEYSFHKGLFD 461

[Close]

BLAST of CmaCh00G002520 vs. ExPASy Swiss-Prot
Match: Q09X08 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Morus indica OX=248361 GN=accD PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.6e-20
Identity = 54/83 (65.06%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 1   MSKRSSALYDYQSNKRFFYVAILTSPTTSGVTASFGILGDIIIAEPNAYIAFAVRRVPRW 60
           M+K SSALYDYQSNK+ FY+AILTSPTT GVTASFG+LGDIIIAEPNAYIAFA +RV   
Sbjct: 386 MAKISSALYDYQSNKKLFYIAILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQ 445

Query: 61  --------------LTFNKGLFD 70
                           F+KGLFD
Sbjct: 446 TLNKTVPEGSQVAEYLFHKGLFD 468

[Close]

BLAST of CmaCh00G002520 vs. ExPASy Swiss-Prot
Match: B1A944 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Carica papaya OX=3649 GN=accD PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 6.1e-20
Identity = 54/83 (65.06%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 1   MSKRSSALYDYQSNKRFFYVAILTSPTTSGVTASFGILGDIIIAEPNAYIAFAVRRV--- 60
           M+K SSALYDYQSNK+ FYV+ILTSPTT GVTASFG+LGDIIIAEPNAYIAFA +RV   
Sbjct: 385 MAKISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQ 444

Query: 61  -----------PRWLTFNKGLFD 70
                           F+KGLFD
Sbjct: 445 TLNKTVPEGSQAAEYLFHKGLFD 467

[Close]

BLAST of CmaCh00G002520 vs. ExPASy Swiss-Prot
Match: Q09MG9 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Citrus sinensis OX=2711 GN=accD PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 6.1e-20
Identity = 54/83 (65.06%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 1   MSKRSSALYDYQSNKRFFYVAILTSPTTSGVTASFGILGDIIIAEPNAYIAFAVRRV--- 60
           M+K SSALYDYQSNK+ FYV+ILTSPTT GVTASFG+LGDIIIAEPNAYIAFA +RV   
Sbjct: 383 MAKISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQ 442

Query: 61  -----------PRWLTFNKGLFD 70
                           F+KGLFD
Sbjct: 443 TLNKTVPEGSQEAEYLFDKGLFD 465

[Close]

BLAST of CmaCh00G002520 vs. ExPASy TrEMBL
Match: A0A411JX73 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Reaumuria trigyna OX=1091135 GN=accD PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 9.1e-19
Identity = 57/84 (67.86%), Postives = 62/84 (73.81%), Query Frame = 0


Query: 1   MSKRSSALYDYQSNKRFFYVAILTSPTTSGVTASFGILGDIIIAEPNAYIAFAVRRVPRW 60
           M+K SSALYDYQSNK+FFYVAILTSPTT GVTASFG+LGDIIIAEPNAYIAFA +RV   
Sbjct: 393 MAKISSALYDYQSNKKFFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQ 452

Query: 61  L--------------TFNKGLFDL 71
                           F+KGLFDL
Sbjct: 453 TLNKTVPEGSQTSEHLFHKGLFDL 476

[Close]

BLAST of CmaCh00G002520 vs. ExPASy TrEMBL
Match: A0A411JWZ8 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Hololachna songarica OX=194564 GN=accD PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 9.1e-19
Identity = 57/84 (67.86%), Postives = 62/84 (73.81%), Query Frame = 0


Query: 1   MSKRSSALYDYQSNKRFFYVAILTSPTTSGVTASFGILGDIIIAEPNAYIAFAVRRVPRW 60
           M+K SSALYDYQSNK+FFYVAILTSPTT GVTASFG+LGDIIIAEPNAYIAFA +RV   
Sbjct: 363 MAKISSALYDYQSNKKFFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQ 422

Query: 61  L--------------TFNKGLFDL 71
                           F+KGLFDL
Sbjct: 423 TLNKTVPEGSQTSEHLFHKGLFDL 446

[Close]

BLAST of CmaCh00G002520 vs. ExPASy TrEMBL
Match: A0A411JTP1 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Myricaria paniculata OX=426457 GN=accD PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.7e-18
Identity = 56/83 (67.47%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 1   MSKRSSALYDYQSNKRFFYVAILTSPTTSGVTASFGILGDIIIAEPNAYIAFAVRRVPRW 60
           M+K SSALYDYQSNK+ FYVAILTSPTT GVTASFG+LGDIIIAEPNAYIAFA +RV   
Sbjct: 402 MAKISSALYDYQSNKKLFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQ 461

Query: 61  L--------------TFNKGLFD 70
                           FNKGLFD
Sbjct: 462 TLNKTVPEGSQSAEHLFNKGLFD 484

[Close]

BLAST of CmaCh00G002520 vs. ExPASy TrEMBL
Match: A0A6M3RJ11 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Myricaria laxiflora OX=223224 GN=accD PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.7e-18
Identity = 56/83 (67.47%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 1   MSKRSSALYDYQSNKRFFYVAILTSPTTSGVTASFGILGDIIIAEPNAYIAFAVRRVPRW 60
           M+K SSALYDYQSNK+ FYVAILTSPTT GVTASFG+LGDIIIAEPNAYIAFA +RV   
Sbjct: 402 MAKISSALYDYQSNKKLFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQ 461

Query: 61  L--------------TFNKGLFD 70
                           FNKGLFD
Sbjct: 462 TLNKTVPEGSQSAEHLFNKGLFD 484

[Close]

BLAST of CmaCh00G002520 vs. ExPASy TrEMBL
Match: A0A6G9IEF0 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Cistanche salsa OX=161396 GN=accD PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.5e-18
Identity = 57/84 (67.86%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 1   MSKRSSALYDYQSNKRFFYVAILTSPTTSGVTASFGILGDIIIAEPNAYIAFAVRR---- 60
           M+K SSALYDYQSNKR FYV+ILTSPTT GVTASFG+LGDIIIAEPN+YIAFA +R    
Sbjct: 447 MAKISSALYDYQSNKRLFYVSILTSPTTGGVTASFGMLGDIIIAEPNSYIAFAGKRVIEQ 506

Query: 61  -----VPRWL-----TFNKGLFDL 71
                VP  L      F+KGLFDL
Sbjct: 507 TLNITVPEGLQVAENLFHKGLFDL 530

[Close]

BLAST of CmaCh00G002520 vs. NCBI nr
Match: YP_009569606.1 (acetyl-CoA carboxylase carboxyltransferase beta subunit [Reaumuria trigyna] >QBC69698.1 acetyl-CoA carboxylase carboxyltransferase beta subunit [Reaumuria trigyna])

HSP 1 Score: 102.4 bits (254), Expect = 1.9e-18
Identity = 57/84 (67.86%), Postives = 62/84 (73.81%), Query Frame = 0


Query: 1   MSKRSSALYDYQSNKRFFYVAILTSPTTSGVTASFGILGDIIIAEPNAYIAFAVRRVPRW 60
           M+K SSALYDYQSNK+FFYVAILTSPTT GVTASFG+LGDIIIAEPNAYIAFA +RV   
Sbjct: 393 MAKISSALYDYQSNKKFFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQ 452

Query: 61  L--------------TFNKGLFDL 71
                           F+KGLFDL
Sbjct: 453 TLNKTVPEGSQTSEHLFHKGLFDL 476

[Close]

BLAST of CmaCh00G002520 vs. NCBI nr
Match: YP_009570281.1 (acetyl-CoA carboxylase carboxyltransferase beta subunit [Hololachna songarica] >QBC69616.1 acetyl-CoA carboxylase carboxyltransferase beta subunit [Hololachna songarica])

HSP 1 Score: 102.4 bits (254), Expect = 1.9e-18
Identity = 57/84 (67.86%), Postives = 62/84 (73.81%), Query Frame = 0


Query: 1   MSKRSSALYDYQSNKRFFYVAILTSPTTSGVTASFGILGDIIIAEPNAYIAFAVRRVPRW 60
           M+K SSALYDYQSNK+FFYVAILTSPTT GVTASFG+LGDIIIAEPNAYIAFA +RV   
Sbjct: 363 MAKISSALYDYQSNKKFFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQ 422

Query: 61  L--------------TFNKGLFDL 71
                           F+KGLFDL
Sbjct: 423 TLNKTVPEGSQTSEHLFHKGLFDL 446

[Close]

BLAST of CmaCh00G002520 vs. NCBI nr
Match: QYC94160.1 (acetyl-CoA carboxylase beta subunit [Myricaria elegans])

HSP 1 Score: 100.9 bits (250), Expect = 5.5e-18
Identity = 56/83 (67.47%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 1   MSKRSSALYDYQSNKRFFYVAILTSPTTSGVTASFGILGDIIIAEPNAYIAFAVRRVPRW 60
           M+K SSALYDYQSNK+ FYVAILTSPTT GVTASFG+LGDIIIAEPNAYIAFA +RV   
Sbjct: 402 MAKISSALYDYQSNKKLFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQ 461

Query: 61  L--------------TFNKGLFD 70
                           FNKGLFD
Sbjct: 462 TLNKTVPEGSQSAEHLFNKGLFD 484

[Close]

BLAST of CmaCh00G002520 vs. NCBI nr
Match: QJD22475.1 (acetyl-CoA carboxylase carboxyltransferase beta subunit [Myricaria laxiflora])

HSP 1 Score: 100.9 bits (250), Expect = 5.5e-18
Identity = 56/83 (67.47%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 1   MSKRSSALYDYQSNKRFFYVAILTSPTTSGVTASFGILGDIIIAEPNAYIAFAVRRVPRW 60
           M+K SSALYDYQSNK+ FYVAILTSPTT GVTASFG+LGDIIIAEPNAYIAFA +RV   
Sbjct: 402 MAKISSALYDYQSNKKLFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQ 461

Query: 61  L--------------TFNKGLFD 70
                           FNKGLFD
Sbjct: 462 TLNKTVPEGSQSAEHLFNKGLFD 484

[Close]

BLAST of CmaCh00G002520 vs. NCBI nr
Match: YP_009570029.1 (acetyl-CoA carboxylase carboxyltransferase beta subunit [Myricaria paniculata] >QBC68452.1 acetyl-CoA carboxylase carboxyltransferase beta subunit [Myricaria paniculata])

HSP 1 Score: 100.9 bits (250), Expect = 5.5e-18
Identity = 56/83 (67.47%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 1   MSKRSSALYDYQSNKRFFYVAILTSPTTSGVTASFGILGDIIIAEPNAYIAFAVRRVPRW 60
           M+K SSALYDYQSNK+ FYVAILTSPTT GVTASFG+LGDIIIAEPNAYIAFA +RV   
Sbjct: 402 MAKISSALYDYQSNKKLFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQ 461

Query: 61  L--------------TFNKGLFD 70
                           FNKGLFD
Sbjct: 462 TLNKTVPEGSQSAEHLFNKGLFD 484

[Close]

BLAST of CmaCh00G002520 vs. TAIR 10
Match: ATCG00500.1 (acetyl-CoA carboxylase carboxyl transferase subunit beta )

HSP 1 Score: 85.9 bits (211), Expect = 1.7e-17
Identity = 43/57 (75.44%), Postives = 50/57 (87.72%), Query Frame = 0


Query: 1   MSKRSSALYDYQSNKRFFYVAILTSPTTSGVTASFGILGDIIIAEPNAYIAFAVRRV 58
           M+K SS L DYQS+K+ FY++ILTSPTT GVTASFG+LGDIIIAEP AYIAFA +RV
Sbjct: 379 MAKISSVLCDYQSSKKLFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRV 435

The following BLAST results are available for this feature:

BLAST of CmaCh00G002520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A344	3.6e-20	65.48	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
Q0G9L0	3.6e-20	65.06	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
Q09X08	3.6e-20	65.06	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
B1A944	6.1e-20	65.06	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
Q09MG9	6.1e-20	65.06	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]

BLAST of CmaCh00G002520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A411JX73	9.1e-19	67.86	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Reaumuria tri...	[more]
A0A411JWZ8	9.1e-19	67.86	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Hololachna so...	[more]
A0A411JTP1	2.7e-18	67.47	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Myricaria pan...	[more]
A0A6M3RJ11	2.7e-18	67.47	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
A0A6G9IEF0	3.5e-18	67.86	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]

BLAST of CmaCh00G002520 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009569606.1	1.9e-18	67.86	acetyl-CoA carboxylase carboxyltransferase beta subunit [Reaumuria trigyna] >QBC...	[more]
YP_009570281.1	1.9e-18	67.86	acetyl-CoA carboxylase carboxyltransferase beta subunit [Hololachna songarica] >...	[more]
QYC94160.1	5.5e-18	67.47	acetyl-CoA carboxylase beta subunit [Myricaria elegans]	[more]
QJD22475.1	5.5e-18	67.47	acetyl-CoA carboxylase carboxyltransferase beta subunit [Myricaria laxiflora]	[more]
YP_009570029.1	5.5e-18	67.47	acetyl-CoA carboxylase carboxyltransferase beta subunit [Myricaria paniculata] >...	[more]

BLAST of CmaCh00G002520 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00500.1	1.7e-17	75.44	acetyl-CoA carboxylase carboxyl transferase subunit beta	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.226.10		coord: 1..71 e-value: 6.9E-12 score: 47.0
None	No IPR available	PANTHER	PTHR42995:SF5	ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT BETA, CHLOROPLASTIC	coord: 1..57
None	No IPR available	PANTHER	PTHR42995	FAMILY NOT NAMED	coord: 1..57
IPR011762	Acetyl-coenzyme A carboxyltransferase, N-terminal	PROSITE	PS50980	COA_CT_NTER	coord: 1..84 score: 21.020552
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 4..57

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G002520.1	CmaCh00G002520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044249	cellular biosynthetic process
biological_process	GO:0006631	fatty acid metabolic process
biological_process	GO:1901576	organic substance biosynthetic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0016740	transferase activity