CmaCh00G002420 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCATAAACCTCTCCTCTCCCTCACCTTCCTCCTCCTCTTTCTGGCTTTCGCCTTTCTCACTTCTTCCACCGCTGCTCCCACCACACGTAAGTAAGTCCCCTTTTTTCTTTCACTTTCTACTGATTTTCTCTAATCAATCTCTCAATTTTCTCGTCTTCCAGCAATCCTGCAATCAAATTTTGACGACCCATCTGCCCAACCTTCCGTTTTCCAGGTCTCTCTCTCCCTCTCTGTTTTTTCTCGAGAAAATTTGAAACAATTTTCTCAGCACCCAAACAGGTGTGATTGAGAAATTGAAGCGTGTTTTTGGTGTACAAATTTTGTAGGATTCGAGAGATTTGGAGATGAGGTTGGTGGGAAGATTGTCTGAAGGAAGAGTGGTTGTGGAGAACAATGACTATCCTGGCACAGGAGCAAACAATCACCACGATCCAAAGTCCCCTGCGGCCAAACCGTAGTGAATTGTCCTTCTGTTTATTACATATGCATTACCAAATTCTAGAAATGGAAAAACTTGTTTGGAGTTTTTTGTTCCTAATATATGTAACTTTATTGGGGCTTAATTATTGTAGTTCTAATAAATGAACTTTATGATATAATAATTTATATAATTTATATTGACTGGCTTTGTAAATGAACTTGAG ATGGGTCATAAACCTCTCCTCTCCCTCACCTTCCTCCTCCTCTTTCTGGCTTTCGCCTTTCTCACTTCTTCCACCGCTGCTCCCACCACACCAATCCTGCAATCAAATTTTGACGACCCATCTGCCCAACCTTCCGTTTTCCAGGATTCGAGAGATTTGGAGATGAGGTTGGTGGGAAGATTGTCTGAAGGAAGAGTGGTTGTGGAGAACAATGACTATCCTGGCACAGGAGCAAACAATCACCACGATCCAAAGTCCCCTGCGGCCAAACCGTAGTGAATTGTCCTTCTGTTTATTACATATGCATTACCAAATTCTAGAAATGGAAAAACTTGTTTGGAGTTTTTTGTTCCTAATATATGTAACTTTATTGGGGCTTAATTATTGTAGTTCTAATAAATGAACTTTATGATATAATAATTTATATAATTTATATTGACTGGCTTTGTAAATGAACTTGAG ATGGGTCATAAACCTCTCCTCTCCCTCACCTTCCTCCTCCTCTTTCTGGCTTTCGCCTTTCTCACTTCTTCCACCGCTGCTCCCACCACACCAATCCTGCAATCAAATTTTGACGACCCATCTGCCCAACCTTCCGTTTTCCAGGATTCGAGAGATTTGGAGATGAGGTTGGTGGGAAGATTGTCTGAAGGAAGAGTGGTTGTGGAGAACAATGACTATCCTGGCACAGGAGCAAACAATCACCACGATCCAAAGTCCCCTGCGGCCAAACCGTAG MGHKPLLSLTFLLLFLAFAFLTSSTAAPTTPILQSNFDDPSAQPSVFQDSRDLEMRLVGRLSEGRVVVENNDYPGTGANNHHDPKSPAAKP Homology
BLAST of CmaCh00G002420 vs. ExPASy TrEMBL
Match: A0A0A0LHJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822320 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 5.4e-17 Identity = 55/85 (64.71%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of CmaCh00G002420 vs. ExPASy TrEMBL
Match: A0A5A7UDI6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G002430 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.9e-15 Identity = 54/86 (62.79%), Postives = 63/86 (73.26%), Query Frame = 0
BLAST of CmaCh00G002420 vs. ExPASy TrEMBL
Match: A0A6A6KJS2 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_004666 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 7.6e-11 Identity = 48/94 (51.06%), Postives = 62/94 (65.96%), Query Frame = 0
BLAST of CmaCh00G002420 vs. ExPASy TrEMBL
Match: A0A2R6Q481 (Protein Rev like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc23042 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.3e-10 Identity = 46/94 (48.94%), Postives = 60/94 (63.83%), Query Frame = 0
BLAST of CmaCh00G002420 vs. ExPASy TrEMBL
Match: A0A5B6ZB32 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_010781 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.7e-10 Identity = 46/90 (51.11%), Postives = 56/90 (62.22%), Query Frame = 0
BLAST of CmaCh00G002420 vs. NCBI nr
Match: KAG6596972.1 (hypothetical protein SDJN03_10152, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028446.1 hypothetical protein SDJN02_09627 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 146.7 bits (369), Expect = 9.5e-32 Identity = 78/98 (79.59%), Postives = 82/98 (83.67%), Query Frame = 0
BLAST of CmaCh00G002420 vs. NCBI nr
Match: KAG7017658.1 (hypothetical protein SDJN02_19524 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 96.7 bits (239), Expect = 1.1e-16 Identity = 57/89 (64.04%), Postives = 62/89 (69.66%), Query Frame = 0
BLAST of CmaCh00G002420 vs. NCBI nr
Match: KGN59481.1 (hypothetical protein Csa_001422 [Cucumis sativus]) HSP 1 Score: 96.7 bits (239), Expect = 1.1e-16 Identity = 55/85 (64.71%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of CmaCh00G002420 vs. NCBI nr
Match: KAG6580910.1 (hypothetical protein SDJN03_20912, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 95.9 bits (237), Expect = 1.9e-16 Identity = 57/89 (64.04%), Postives = 61/89 (68.54%), Query Frame = 0
BLAST of CmaCh00G002420 vs. NCBI nr
Match: KAA0053852.1 (hypothetical protein E6C27_scaffold135G002430 [Cucumis melo var. makuwa]) HSP 1 Score: 90.5 bits (223), Expect = 8.0e-15 Identity = 54/86 (62.79%), Postives = 63/86 (73.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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