CmaCh00G002370 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh00G002370
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RING-type E3 ubiquitin transferase
Location	Cma_Chr00: 17008757 .. 17009875 (+)
RNA-Seq Expression	CmaCh00G002370
Synteny	CmaCh00G002370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGTAGAAACACCCATTGGTGTTACAGATGTGAGCAGCCAGTTCAACTCCGTGGGCGGGACATGGTTTGCGCTAGCTGTAATGGAGGATTTGTTCAAGAACTCGATGAAATGATGGAAAGAGGTCCCCTTGATTTCTTTGGAGCCTAATGGAGGATTTGTTCAAGAACTCGATGAAATGATGGAAAGAGGTCCCCTTGATTTCTTTGGAGCCCATGGTCATGAATACCACAATCGGAGGCTTGGACTCCTGGACCTTTTCTCAAACTTTATGAGGCAACGGTTGATAGACAGAAATGACATGAGGGGAAGGTTGGAATCTATTCCAGATCATGGTTCAGGGGCAACGGTTGATAGACAGAAATGACATGAGGGGAAGGTTGGAATCTATTCCAGATCATGGTTCAGGATTTGGTCCTTGGTTGATCTTTGGTGGCCAAATTCCTGTTAGGTTGTCTGGACATGGTGGGTTTGAAGCCTTTTTTAATGGGGTTCCTGGAATTGGTGTGAGTAGGAACAATGGTGGTGATTATTTTATTGGTCCTGGACTTGAAGAATTGTTTGAACAGCTTTCAGCAAACGACCGACGCGGACCACCCCCAGCATCTAGATCTTCAATCGATGCAATGCCTGTTGTTAAAATTACGCAAAGACACATCCGTTCCCCCAGCATCTAGATCTTCAATCGATGCAATGCCTGTTGTTAAAATTACGCAAAGACACATCCGTTCAAATTCACACTGCCCTGTTTGCCAAGATAAATTTGAATTAGGGTCTGAAGCTAGGAAAATGCCATGTGACCATATGTATCATTCGGATTGTATAGTTCCCTGGCTTGTCCAGCACAACTCCTGCCCTGTTTGCCGCCAAGAGCTGCCTGCACAAGGGTCAGGTGGTAGTCACAGCTCGTCTGGAAGCAACAATCTTAGTCGAAACAGCCGAGAGAGGGAGAATAGTAGGACAAATCAAGGAAGGAGGAACCCATTTTCAAGTTTATGGCCATTCCGAGCATCGAGTTCTGACTCAAACCATAGTGCGACCACTGGAAGCAGCTCACCAGCCCTACATGAGAGCACCCAACACCAAACAGGGTATTCTGGATGGCCTTTCGACTAG

mRNA sequence

ATGTCAAGTAGAAACACCCATTGGTGTTACAGATGTGAGCAGCCAGTTCAACTCCGTGGGCGGGACATGGTTTGCGCTAGCTGTAATGGAGGATTTGTTCAAGAACTCGATGAAATGATGGAAAGAGGTCCCCTTGATTTCTTTGGAGCCCATGGTCATGAATACCACAATCGGAGGCTTGGACTCCTGGACCTTTTCTCAAACTTTATGAGGCAACGGTTGATAGACAGAAATGACATGAGGGGAAGGTTGGAATCTATTCCAGATCATGATCATGGTTCAGGATTTGGTCCTTGGTTGATCTTTGGTGGCCAAATTCCTGTTAGGTTGTCTGGACATGGTGGGTTTGAAGCCTTTTTTAATGGGGTTCCTGGAATTGGTCAAACGACCGACGCGGACCACCCCCAGCATCTAGATCTTCAATCGATGCAATGCCTGTTGTTAAAATTACGCAAAGACACATCCGTTCCCCCAGCATCTAGATCTTCAATCGATGCAATGCCTGTTGTTAAAATTACGCAAAGACACATCCGTTCAAATTCACACTGCCCTGTTTGCCAAGATAAATTTGAATTAGGGTCTGAAGCTAGGAAAATGCCATGTGACCATATGTATCATTCGGATTGTATAGTTCCCTGGCTTGTCCAGCACAACTCCTGCCCTGTTTGCCGCCAAGAGCTGCCTGCACAAGGGTCAGGTGGTAGTCACAGCTCGTCTGGAAGCAACAATCTTAGTCGAAACAGCCGAGAGAGGGAGAATAGTAGGACAAATCAAGGAAGGAGGAACCCATTTTCAAGTTTATGGCCATTCCGAGCATCGAGTTCTGACTCAAACCATAGTGCGACCACTGGAAGCAGCTCACCAGCCCTACATGAGAGCACCCAACACCAAACAGGGTATTCTGGATGGCCTTTCGACTAG

Coding sequence (CDS)

ATGTCAAGTAGAAACACCCATTGGTGTTACAGATGTGAGCAGCCAGTTCAACTCCGTGGGCGGGACATGGTTTGCGCTAGCTGTAATGGAGGATTTGTTCAAGAACTCGATGAAATGATGGAAAGAGGTCCCCTTGATTTCTTTGGAGCCCATGGTCATGAATACCACAATCGGAGGCTTGGACTCCTGGACCTTTTCTCAAACTTTATGAGGCAACGGTTGATAGACAGAAATGACATGAGGGGAAGGTTGGAATCTATTCCAGATCATGATCATGGTTCAGGATTTGGTCCTTGGTTGATCTTTGGTGGCCAAATTCCTGTTAGGTTGTCTGGACATGGTGGGTTTGAAGCCTTTTTTAATGGGGTTCCTGGAATTGGTCAAACGACCGACGCGGACCACCCCCAGCATCTAGATCTTCAATCGATGCAATGCCTGTTGTTAAAATTACGCAAAGACACATCCGTTCCCCCAGCATCTAGATCTTCAATCGATGCAATGCCTGTTGTTAAAATTACGCAAAGACACATCCGTTCAAATTCACACTGCCCTGTTTGCCAAGATAAATTTGAATTAGGGTCTGAAGCTAGGAAAATGCCATGTGACCATATGTATCATTCGGATTGTATAGTTCCCTGGCTTGTCCAGCACAACTCCTGCCCTGTTTGCCGCCAAGAGCTGCCTGCACAAGGGTCAGGTGGTAGTCACAGCTCGTCTGGAAGCAACAATCTTAGTCGAAACAGCCGAGAGAGGGAGAATAGTAGGACAAATCAAGGAAGGAGGAACCCATTTTCAAGTTTATGGCCATTCCGAGCATCGAGTTCTGACTCAAACCATAGTGCGACCACTGGAAGCAGCTCACCAGCCCTACATGAGAGCACCCAACACCAAACAGGGTATTCTGGATGGCCTTTCGACTAG

Protein sequence

MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRLGLLDLFSNFMRQRLIDRNDMRGRLESIPDHDHGSGFGPWLIFGGQIPVRLSGHGGFEAFFNGVPGIGQTTDADHPQHLDLQSMQCLLLKLRKDTSVPPASRSSIDAMPVVKITQRHIRSNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSSSGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQTGYSGWPFD

Homology

[Close]

BLAST of CmaCh00G002370 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 8.6e-72
Identity = 163/329 (49.54%), Postives = 209/329 (63.53%), Query Frame = 0


Query: 2   SSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAH-GHEYHNRRL 61
           SSRNTHWC+RC++ V+L G++ VC  C GGFV+ELD M +  P D F +H G    ++  
Sbjct: 3   SSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEELD-MAQASPFDMFRSHRGVVERDQTF 62

Query: 62  GLLDLFSNFMRQRLIDRN---DMRGRLESIPDHDHGSGFGPWLIFGGQIPVRLSGHGGFE 121
            L+D FS FMR RL +R+   ++RGR  S    ++  G  P LIFGGQ+P RL+G    E
Sbjct: 63  DLMDAFSVFMRNRLAERSHDREIRGRTIS-SGPENFPGLAPLLIFGGQVPYRLTGDNAVE 122

Query: 122 AFFN-GVPGIGQTTDADHPQHLDLQSMQCLLLKLRKDTS---VPPASRSSIDAMPVVKIT 181
           A FN G PGIG  T  +   +     ++ L  +L   T+    PPA RS+IDA+P +KI 
Sbjct: 123 ALFNGGSPGIG-ITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 182

Query: 182 QRHIR-SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGS 241
           QRH+R S+S+CPVC+D+FELGSEA++MPC+H+YHSDCIVPWLVQHNSCPVCRQELP+  S
Sbjct: 183 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS-AS 242

Query: 242 GGSHSSSGS----NNLSRNSRERENSRTN-QGRRNPFSSLWPFRASSSDSNHSATTG--- 301
           G S S + +    N  S +S    NSR N   RRNPFSS WPFR+S S S+ +   G   
Sbjct: 243 GPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTR 302

Query: 302 ----SSSPALHESTQHQ---TGYSGWPFD 307
               S     +   QHQ    GYSGWPFD
Sbjct: 303 NSDTSDENHNYHQQQHQQSYMGYSGWPFD 327

[Close]

BLAST of CmaCh00G002370 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 5.2e-69
Identity = 157/333 (47.15%), Postives = 204/333 (61.26%), Query Frame = 0


Query: 2   SSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRLG 61
           S RNTHWC+RC++ V LR RD VC+ C GGFV+E+D    R       AH     +    
Sbjct: 3   SIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEIDIGPSR-------AHRDVERDPTFD 62

Query: 62  LLDLFSNFMRQRLIDRN---DMRGRLESIPDHDHGSGFGPWLIFGGQIPVRLSG--HGGF 121
           L++ FS FMR RL +R+   ++ GRL S       S   P LIFGGQ P RL+G  +   
Sbjct: 63  LMEAFSAFMRSRLAERSYDREISGRLGSAGSESF-SNLAPLLIFGGQAPFRLAGGDNSSV 122

Query: 122 EAFFNG-VPGIGQTTDADHPQHLDLQSMQCLLLKLRKDT---SVPPASRSSIDAMPVVKI 181
           EAF NG  PGIG     +   +     ++ L+ +L   T     PPA +SSIDA+P +KI
Sbjct: 123 EAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIKI 182

Query: 182 TQRHIR-SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQG 241
           TQ+H++ S+SHCPVC+D+FEL SEA++MPC H+YHSDCIVPWLVQHNSCPVCR+ELP++G
Sbjct: 183 TQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRG 242

Query: 242 SGGSHSSSGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSS-------DSNHSATTG 301
           S    SSS  ++ +R++  RENSR    RRN FS+LWPFR+SSS       D+N++AT  
Sbjct: 243 S----SSSTQSSQNRSTNGRENSR----RRNIFSNLWPFRSSSSSSTQNRRDTNNTATAE 302

Query: 302 SSSPALHESTQHQ-----------TGYSGWPFD 307
                 H+  Q Q            GYSGWPFD
Sbjct: 303 EGHYHHHQQQQQQHQHQHQQQQSHMGYSGWPFD 319

[Close]

BLAST of CmaCh00G002370 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 7.9e-25
Identity = 84/296 (28.38%), Postives = 132/296 (44.59%), Query Frame = 0


Query: 8   WCYRCEQPVQLR----GRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHE--YHNRRLG 67
           +CY+C + V +       D  C  CN GF++E D         F   + +   +H+  L 
Sbjct: 24  FCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHDLFLT 83

Query: 68  LLDLFSNFM-------------RQRLIDRNDMRGRLESIPDHDHGSGFGPWLIFGGQI-P 127
           L D F++ +                 ID N+      +         F P+      +  
Sbjct: 84  LSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTRSGRGDPFAFDPFTFIQNHLND 143

Query: 128 VRLSGHGGFEAFFNGVPGIGQTTDADHPQHLDLQSMQCLLLKLRKDT----SVPPASRSS 187
           +R SG        N     G    A+   +     ++ L+ +L ++       PPAS+S+
Sbjct: 144 LRSSGAQIEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSA 203

Query: 188 IDAMPVVKITQRHIRSN-SHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPV 247
           I+A+P+V IT+ ++ S  + C VC D FE G+EA++MPC H+YH DC++PWL  HNSCPV
Sbjct: 204 IEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPV 263

Query: 248 CRQELPAQGSG------GSHSSSGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRA 273
           CR ELP           G+  +SG N+   + +  +       R    S  WPF+A
Sbjct: 264 CRHELPTDDPDYERRVRGAQGTSGGNDGDNSGQRSDGDNRTVERSFRISLPWPFQA 319

[Close]

BLAST of CmaCh00G002370 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 7.9e-25
Identity = 83/304 (27.30%), Postives = 132/304 (43.42%), Query Frame = 0


Query: 8   WCYRCEQPVQL---RGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRLGLLD 67
           +CY+C Q V +      D  C  CN GF++E ++      L+F       +      + D
Sbjct: 22  FCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSF----FPMAD 81

Query: 68  LFSNF--------------MRQRLIDRNDMRGRLESIPDHDHGSGFGPWLIFGGQIPVRL 127
            FS                M    +    M+ +  S   +     F P+      +    
Sbjct: 82  PFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTLR 141

Query: 128 SGHGGFEAFFNGVPG-IGQTTDADHPQHLDLQSMQCLLLKLRKDT----SVPPASRSSID 187
           S    FE      P   G     +   +     ++ L+ +L ++       PPAS+S+ID
Sbjct: 142 SSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAID 201

Query: 188 AMPVVKITQRHIRSN-SHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCR 247
           A+P VK+T+  ++S  + C VC D+FE GS+ ++MPC H++H DC++PWL  HNSCPVCR
Sbjct: 202 ALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCR 261

Query: 248 QELPAQGSGGSHSSSGSNNLSRNSRERENSRTNQGRRNPFSSL---WPFRASSSDSNHSA 286
            ELP       + S GS          +   + +G++ P  S+   WPFR      + S 
Sbjct: 262 FELPTDDPDYENRSQGSQG------SGDGQGSVEGQQTPRFSIQLPWPFRRQDGSGSGSG 315

[Close]

BLAST of CmaCh00G002370 vs. ExPASy Swiss-Prot
Match: Q9BV68 (E3 ubiquitin-protein ligase RNF126 OS=Homo sapiens OX=9606 GN=RNF126 PE=1 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 6.2e-22
Identity = 51/118 (43.22%), Postives = 72/118 (61.02%), Query Frame = 0


Query: 147 LLKLRKDTSVPPASRSSIDAMPVVKITQRHIRSNSHCPVCQDKFELGSEARKMPCDHMYH 206
           LL   ++T  PPA +  I A+P V +T+ H+ S   CPVC+D + LG   R++PC+H++H
Sbjct: 193 LLNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFH 252

Query: 207 SDCIVPWLVQHNSCPVCRQELPAQ-------GSGGSHSSSGSNNLSRNSRERENSRTN 258
             CIVPWL QH+SCPVCR+ L  Q       G  G   SS S++ S +S   EN+ +N
Sbjct: 253 DGCIVPWLEQHDSCPVCRKSLTGQNTATNPPGLTGVSFSSSSSSSSSSSPSNENATSN 310

[Close]

BLAST of CmaCh00G002370 vs. ExPASy TrEMBL
Match: A0A6J1IB00 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111473444 PE=4 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 6.9e-157
Identity = 278/308 (90.26%), Postives = 282/308 (91.56%), Query Frame = 0


Query: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRL 60
           MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRL
Sbjct: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRL 60

Query: 61  GLLDLFSNFMRQRLIDRNDMRGRLESIPDHDHGSGFGPWLIFGGQIPVRLSGHGGFEAFF 120
           GLLDLFSNFMRQRLIDRNDMRGRLESIP  DHGSGFGPWLIFGGQIPVRLSGHGGFEAFF
Sbjct: 61  GLLDLFSNFMRQRLIDRNDMRGRLESIP--DHGSGFGPWLIFGGQIPVRLSGHGGFEAFF 120

Query: 121 NGVPGIG--QTTDADHPQHLDLQSMQCLLLKLRKDTSVPPASRSSIDAMPVVKITQRHIR 180
           NGVPGIG  +    D+     L+ +    L        PPASRSSIDAMPVVKITQRHIR
Sbjct: 121 NGVPGIGVSRNNGGDYFIGPGLEEL-FEQLSANDRRGPPPASRSSIDAMPVVKITQRHIR 180

Query: 181 SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSS 240
           SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSS
Sbjct: 181 SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSS 240

Query: 241 SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT 300
           SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT
Sbjct: 241 SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT 300

Query: 301 GYSGWPFD 307
           GYSGWPFD
Sbjct: 301 GYSGWPFD 305

[Close]

BLAST of CmaCh00G002370 vs. ExPASy TrEMBL
Match: A0A6J1FK80 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111446055 PE=4 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 7.1e-154
Identity = 273/308 (88.64%), Postives = 281/308 (91.23%), Query Frame = 0


Query: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRL 60
           MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMER PLDFFGA+GHEYHNRRL
Sbjct: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERDPLDFFGANGHEYHNRRL 60

Query: 61  GLLDLFSNFMRQRLIDRNDMRGRLESIPDHDHGSGFGPWLIFGGQIPVRLSGHGGFEAFF 120
           GLL+LFSNFMRQRLIDRNDMRGRLESIP  DHGSGFGPWLIFGGQIPVRLSGHGGFEAFF
Sbjct: 61  GLLELFSNFMRQRLIDRNDMRGRLESIP--DHGSGFGPWLIFGGQIPVRLSGHGGFEAFF 120

Query: 121 NGVPGIG--QTTDADHPQHLDLQSMQCLLLKLRKDTSVPPASRSSIDAMPVVKITQRHIR 180
           NGVPGIG  ++   D+     L+ +    L        PPASRSSIDAMPVVKITQRHIR
Sbjct: 121 NGVPGIGVSRSNGGDYFIGPGLEEL-FEQLSANDRRGPPPASRSSIDAMPVVKITQRHIR 180

Query: 181 SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSS 240
           SNSHCPVCQDKFELG+EARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGG HSS
Sbjct: 181 SNSHCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGIHSS 240

Query: 241 SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT 300
           SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT
Sbjct: 241 SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT 300

Query: 301 GYSGWPFD 307
           GYSGWPFD
Sbjct: 301 GYSGWPFD 305

[Close]

BLAST of CmaCh00G002370 vs. ExPASy TrEMBL
Match: A0A0A0LCH6 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G822250 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 1.1e-141
Identity = 250/308 (81.17%), Postives = 269/308 (87.34%), Query Frame = 0


Query: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRL 60
           MS+ NTHWCYRCEQPV+LRGRDM C SCNGGFVQELDEMMER PLD FGA G+EY NRRL
Sbjct: 1   MSTANTHWCYRCEQPVRLRGRDMTCLSCNGGFVQELDEMMERSPLDLFGASGNEYQNRRL 60

Query: 61  GLLDLFSNFMRQRLIDRNDMRGRLESIPDHDHGSGFGPWLIFGGQIPVRLSGHGGFEAFF 120
           GLL+LFSNFMRQRL+DRND+RGRL+SIP  DHG GFGPWLIFGGQIPVRLSGHGGFEAFF
Sbjct: 61  GLLELFSNFMRQRLVDRNDIRGRLDSIP--DHGPGFGPWLIFGGQIPVRLSGHGGFEAFF 120

Query: 121 NGVPGIG--QTTDADHPQHLDLQSMQCLLLKLRKDTSVPPASRSSIDAMPVVKITQRHIR 180
           NGVPGIG  ++   D+     L+ +    L        PPASRSSIDAMPVVKITQRHIR
Sbjct: 121 NGVPGIGVSRSNGGDYFIGPGLEEL-FEQLSANDRRGPPPASRSSIDAMPVVKITQRHIR 180

Query: 181 SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSS 240
           SNSHCPVCQDKFELGSEAR+MPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSG SHSS
Sbjct: 181 SNSHCPVCQDKFELGSEARQMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGSSHSS 240

Query: 241 SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT 300
           SGSNN SRNSR+REN RT QGRRNPF+SLWPFRASSS+SNHSATTGS+SPALHE+ QH+T
Sbjct: 241 SGSNNSSRNSRDRENGRTTQGRRNPFTSLWPFRASSSNSNHSATTGSNSPALHETNQHET 300

Query: 301 GYSGWPFD 307
           GY GWPFD
Sbjct: 301 GYYGWPFD 305

[Close]

BLAST of CmaCh00G002370 vs. ExPASy TrEMBL
Match: A0A5A7UFI3 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006970 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.2e-140
Identity = 248/308 (80.52%), Postives = 268/308 (87.01%), Query Frame = 0


Query: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRL 60
           MS+ NTHWCYRCEQPV+LRGRDM C SCNGGFVQELDEMMER PLD FGA G+EY NRRL
Sbjct: 1   MSTGNTHWCYRCEQPVRLRGRDMTCLSCNGGFVQELDEMMERSPLDLFGASGNEYQNRRL 60

Query: 61  GLLDLFSNFMRQRLIDRNDMRGRLESIPDHDHGSGFGPWLIFGGQIPVRLSGHGGFEAFF 120
           GLL+LFSNFMRQR++DRND+RGRL+SIP  DHG GFGPWLIFGGQIPVRLSGHGGFEAFF
Sbjct: 61  GLLELFSNFMRQRMVDRNDIRGRLDSIP--DHGPGFGPWLIFGGQIPVRLSGHGGFEAFF 120

Query: 121 NGVPGIG--QTTDADHPQHLDLQSMQCLLLKLRKDTSVPPASRSSIDAMPVVKITQRHIR 180
           NGVPGIG  ++   D+     L+ +    L        PPASRSSIDAMPVVKITQRHIR
Sbjct: 121 NGVPGIGVSRSNGGDYFIGPGLEEL-FEQLSANDRRGPPPASRSSIDAMPVVKITQRHIR 180

Query: 181 SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSS 240
           SNSHCPVCQDKFELGSEAR+MPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGS  SHSS
Sbjct: 181 SNSHCPVCQDKFELGSEARQMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSSSSHSS 240

Query: 241 SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT 300
           SGSNN SRNSR+RENSRT QGRRNPF+SLWPFRASSS+SNH ATTGS+SPALHE+ QH+T
Sbjct: 241 SGSNNSSRNSRDRENSRTTQGRRNPFTSLWPFRASSSNSNHGATTGSNSPALHETNQHET 300

Query: 301 GYSGWPFD 307
           GY GWPFD
Sbjct: 301 GYYGWPFD 305

[Close]

BLAST of CmaCh00G002370 vs. ExPASy TrEMBL
Match: A0A1S3B774 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103486912 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.2e-140
Identity = 248/308 (80.52%), Postives = 268/308 (87.01%), Query Frame = 0


Query: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRL 60
           MS+ NTHWCYRCEQPV+LRGRDM C SCNGGFVQELDEMMER PLD FGA G+EY NRRL
Sbjct: 1   MSTGNTHWCYRCEQPVRLRGRDMTCLSCNGGFVQELDEMMERSPLDLFGASGNEYQNRRL 60

Query: 61  GLLDLFSNFMRQRLIDRNDMRGRLESIPDHDHGSGFGPWLIFGGQIPVRLSGHGGFEAFF 120
           GLL+LFSNFMRQR++DRND+RGRL+SIP  DHG GFGPWLIFGGQIPVRLSGHGGFEAFF
Sbjct: 61  GLLELFSNFMRQRMVDRNDIRGRLDSIP--DHGPGFGPWLIFGGQIPVRLSGHGGFEAFF 120

Query: 121 NGVPGIG--QTTDADHPQHLDLQSMQCLLLKLRKDTSVPPASRSSIDAMPVVKITQRHIR 180
           NGVPGIG  ++   D+     L+ +    L        PPASRSSIDAMPVVKITQRHIR
Sbjct: 121 NGVPGIGVSRSNGGDYFIGPGLEEL-FEQLSANDRRGPPPASRSSIDAMPVVKITQRHIR 180

Query: 181 SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSS 240
           SNSHCPVCQDKFELGSEAR+MPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGS  SHSS
Sbjct: 181 SNSHCPVCQDKFELGSEARQMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSSSSHSS 240

Query: 241 SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT 300
           SGSNN SRNSR+RENSRT QGRRNPF+SLWPFRASSS+SNH ATTGS+SPALHE+ QH+T
Sbjct: 241 SGSNNSSRNSRDRENSRTTQGRRNPFTSLWPFRASSSNSNHGATTGSNSPALHETNQHET 300

Query: 301 GYSGWPFD 307
           GY GWPFD
Sbjct: 301 GYYGWPFD 305

[Close]

BLAST of CmaCh00G002370 vs. NCBI nr
Match: XP_022974705.1 (probable E3 ubiquitin-protein ligase RHC1A isoform X1 [Cucurbita maxima] >XP_022974706.1 probable E3 ubiquitin-protein ligase RHC1A isoform X2 [Cucurbita maxima] >XP_022974707.1 probable E3 ubiquitin-protein ligase RHC1A isoform X3 [Cucurbita maxima] >XP_022974708.1 probable E3 ubiquitin-protein ligase RHC1A isoform X4 [Cucurbita maxima] >XP_022975226.1 probable E3 ubiquitin-protein ligase RHC1A [Cucurbita maxima])

HSP 1 Score: 563.1 bits (1450), Expect = 1.4e-156
Identity = 278/308 (90.26%), Postives = 282/308 (91.56%), Query Frame = 0


Query: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRL 60
           MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRL
Sbjct: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRL 60

Query: 61  GLLDLFSNFMRQRLIDRNDMRGRLESIPDHDHGSGFGPWLIFGGQIPVRLSGHGGFEAFF 120
           GLLDLFSNFMRQRLIDRNDMRGRLESIP  DHGSGFGPWLIFGGQIPVRLSGHGGFEAFF
Sbjct: 61  GLLDLFSNFMRQRLIDRNDMRGRLESIP--DHGSGFGPWLIFGGQIPVRLSGHGGFEAFF 120

Query: 121 NGVPGIG--QTTDADHPQHLDLQSMQCLLLKLRKDTSVPPASRSSIDAMPVVKITQRHIR 180
           NGVPGIG  +    D+     L+ +    L        PPASRSSIDAMPVVKITQRHIR
Sbjct: 121 NGVPGIGVSRNNGGDYFIGPGLEEL-FEQLSANDRRGPPPASRSSIDAMPVVKITQRHIR 180

Query: 181 SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSS 240
           SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSS
Sbjct: 181 SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSS 240

Query: 241 SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT 300
           SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT
Sbjct: 241 SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT 300

Query: 301 GYSGWPFD 307
           GYSGWPFD
Sbjct: 301 GYSGWPFD 305

[Close]

BLAST of CmaCh00G002370 vs. NCBI nr
Match: XP_023539608.1 (probable E3 ubiquitin-protein ligase RHC1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 557.0 bits (1434), Expect = 1.0e-154
Identity = 274/308 (88.96%), Postives = 283/308 (91.88%), Query Frame = 0


Query: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRL 60
           MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGA+GHEYHNRRL
Sbjct: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGANGHEYHNRRL 60

Query: 61  GLLDLFSNFMRQRLIDRNDMRGRLESIPDHDHGSGFGPWLIFGGQIPVRLSGHGGFEAFF 120
           GLL+LFSNFMRQRLIDRNDMRGRLESIP  DHGSGFGPWLIFGGQIPVRLSGHGGFEAFF
Sbjct: 61  GLLELFSNFMRQRLIDRNDMRGRLESIP--DHGSGFGPWLIFGGQIPVRLSGHGGFEAFF 120

Query: 121 NGVPGIG--QTTDADHPQHLDLQSMQCLLLKLRKDTSVPPASRSSIDAMPVVKITQRHIR 180
           NGVPGIG  ++   D+     L+ +    L        PPASRSSIDAMPVVKITQRHIR
Sbjct: 121 NGVPGIGVSRSNGGDYFIGPGLEEL-FEQLSANDRRGPPPASRSSIDAMPVVKITQRHIR 180

Query: 181 SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSS 240
           SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSS
Sbjct: 181 SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSS 240

Query: 241 SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT 300
           SGSNNL+RNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPA+HESTQHQT
Sbjct: 241 SGSNNLNRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPAVHESTQHQT 300

Query: 301 GYSGWPFD 307
           GYSGWPFD
Sbjct: 301 GYSGWPFD 305

[Close]

BLAST of CmaCh00G002370 vs. NCBI nr
Match: KAG7028452.1 (putative E3 ubiquitin-protein ligase RHC1A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 556.6 bits (1433), Expect = 1.3e-154
Identity = 275/308 (89.29%), Postives = 282/308 (91.56%), Query Frame = 0


Query: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRL 60
           MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMER PLDFFGA+GHEYHNRRL
Sbjct: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERDPLDFFGANGHEYHNRRL 60

Query: 61  GLLDLFSNFMRQRLIDRNDMRGRLESIPDHDHGSGFGPWLIFGGQIPVRLSGHGGFEAFF 120
           GLL+LFSNFMRQRLIDRNDMRGRLESIP  DHGSGFGPWLIFGGQIPVRLSGHGGFEAFF
Sbjct: 61  GLLELFSNFMRQRLIDRNDMRGRLESIP--DHGSGFGPWLIFGGQIPVRLSGHGGFEAFF 120

Query: 121 NGVPGIG--QTTDADHPQHLDLQSMQCLLLKLRKDTSVPPASRSSIDAMPVVKITQRHIR 180
           NGVPGIG  ++   D+     L+ +    L        PPASRSSIDAMPVVKITQRHIR
Sbjct: 121 NGVPGIGVSRSNGGDYFIGPGLEEL-FEQLSANDRRGPPPASRSSIDAMPVVKITQRHIR 180

Query: 181 SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSS 240
           SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSS
Sbjct: 181 SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSS 240

Query: 241 SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT 300
           SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT
Sbjct: 241 SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT 300

Query: 301 GYSGWPFD 307
           GYSGWPFD
Sbjct: 301 GYSGWPFD 305

[Close]

BLAST of CmaCh00G002370 vs. NCBI nr
Match: XP_022940469.1 (probable E3 ubiquitin-protein ligase RHC1A [Cucurbita moschata])

HSP 1 Score: 553.1 bits (1424), Expect = 1.5e-153
Identity = 273/308 (88.64%), Postives = 281/308 (91.23%), Query Frame = 0


Query: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRL 60
           MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMER PLDFFGA+GHEYHNRRL
Sbjct: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERDPLDFFGANGHEYHNRRL 60

Query: 61  GLLDLFSNFMRQRLIDRNDMRGRLESIPDHDHGSGFGPWLIFGGQIPVRLSGHGGFEAFF 120
           GLL+LFSNFMRQRLIDRNDMRGRLESIP  DHGSGFGPWLIFGGQIPVRLSGHGGFEAFF
Sbjct: 61  GLLELFSNFMRQRLIDRNDMRGRLESIP--DHGSGFGPWLIFGGQIPVRLSGHGGFEAFF 120

Query: 121 NGVPGIG--QTTDADHPQHLDLQSMQCLLLKLRKDTSVPPASRSSIDAMPVVKITQRHIR 180
           NGVPGIG  ++   D+     L+ +    L        PPASRSSIDAMPVVKITQRHIR
Sbjct: 121 NGVPGIGVSRSNGGDYFIGPGLEEL-FEQLSANDRRGPPPASRSSIDAMPVVKITQRHIR 180

Query: 181 SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSS 240
           SNSHCPVCQDKFELG+EARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGG HSS
Sbjct: 181 SNSHCPVCQDKFELGTEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGIHSS 240

Query: 241 SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT 300
           SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT
Sbjct: 241 SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT 300

Query: 301 GYSGWPFD 307
           GYSGWPFD
Sbjct: 301 GYSGWPFD 305

[Close]

BLAST of CmaCh00G002370 vs. NCBI nr
Match: XP_004136656.1 (probable E3 ubiquitin-protein ligase RHC1A [Cucumis sativus] >KGN59473.1 hypothetical protein Csa_001982 [Cucumis sativus])

HSP 1 Score: 512.7 bits (1319), Expect = 2.2e-141
Identity = 250/308 (81.17%), Postives = 269/308 (87.34%), Query Frame = 0


Query: 1   MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRL 60
           MS+ NTHWCYRCEQPV+LRGRDM C SCNGGFVQELDEMMER PLD FGA G+EY NRRL
Sbjct: 1   MSTANTHWCYRCEQPVRLRGRDMTCLSCNGGFVQELDEMMERSPLDLFGASGNEYQNRRL 60

Query: 61  GLLDLFSNFMRQRLIDRNDMRGRLESIPDHDHGSGFGPWLIFGGQIPVRLSGHGGFEAFF 120
           GLL+LFSNFMRQRL+DRND+RGRL+SIP  DHG GFGPWLIFGGQIPVRLSGHGGFEAFF
Sbjct: 61  GLLELFSNFMRQRLVDRNDIRGRLDSIP--DHGPGFGPWLIFGGQIPVRLSGHGGFEAFF 120

Query: 121 NGVPGIG--QTTDADHPQHLDLQSMQCLLLKLRKDTSVPPASRSSIDAMPVVKITQRHIR 180
           NGVPGIG  ++   D+     L+ +    L        PPASRSSIDAMPVVKITQRHIR
Sbjct: 121 NGVPGIGVSRSNGGDYFIGPGLEEL-FEQLSANDRRGPPPASRSSIDAMPVVKITQRHIR 180

Query: 181 SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSS 240
           SNSHCPVCQDKFELGSEAR+MPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSG SHSS
Sbjct: 181 SNSHCPVCQDKFELGSEARQMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGSSHSS 240

Query: 241 SGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQT 300
           SGSNN SRNSR+REN RT QGRRNPF+SLWPFRASSS+SNHSATTGS+SPALHE+ QH+T
Sbjct: 241 SGSNNSSRNSRDRENGRTTQGRRNPFTSLWPFRASSSNSNHSATTGSNSPALHETNQHET 300

Query: 301 GYSGWPFD 307
           GY GWPFD
Sbjct: 301 GYYGWPFD 305

[Close]

BLAST of CmaCh00G002370 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 271.9 bits (694), Expect = 6.1e-73
Identity = 163/329 (49.54%), Postives = 209/329 (63.53%), Query Frame = 0


Query: 2   SSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAH-GHEYHNRRL 61
           SSRNTHWC+RC++ V+L G++ VC  C GGFV+ELD M +  P D F +H G    ++  
Sbjct: 3   SSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEELD-MAQASPFDMFRSHRGVVERDQTF 62

Query: 62  GLLDLFSNFMRQRLIDRN---DMRGRLESIPDHDHGSGFGPWLIFGGQIPVRLSGHGGFE 121
            L+D FS FMR RL +R+   ++RGR  S    ++  G  P LIFGGQ+P RL+G    E
Sbjct: 63  DLMDAFSVFMRNRLAERSHDREIRGRTIS-SGPENFPGLAPLLIFGGQVPYRLTGDNAVE 122

Query: 122 AFFN-GVPGIGQTTDADHPQHLDLQSMQCLLLKLRKDTS---VPPASRSSIDAMPVVKIT 181
           A FN G PGIG  T  +   +     ++ L  +L   T+    PPA RS+IDA+P +KI 
Sbjct: 123 ALFNGGSPGIG-ITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 182

Query: 182 QRHIR-SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGS 241
           QRH+R S+S+CPVC+D+FELGSEA++MPC+H+YHSDCIVPWLVQHNSCPVCRQELP+  S
Sbjct: 183 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS-AS 242

Query: 242 GGSHSSSGS----NNLSRNSRERENSRTN-QGRRNPFSSLWPFRASSSDSNHSATTG--- 301
           G S S + +    N  S +S    NSR N   RRNPFSS WPFR+S S S+ +   G   
Sbjct: 243 GPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTR 302

Query: 302 ----SSSPALHESTQHQ---TGYSGWPFD 307
               S     +   QHQ    GYSGWPFD
Sbjct: 303 NSDTSDENHNYHQQQHQQSYMGYSGWPFD 327

[Close]

BLAST of CmaCh00G002370 vs. TAIR 10
Match: AT2G40830.1 (RING-H2 finger C1A )

HSP 1 Score: 271.9 bits (694), Expect = 6.1e-73
Identity = 163/329 (49.54%), Postives = 209/329 (63.53%), Query Frame = 0


Query: 2   SSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAH-GHEYHNRRL 61
           SSRNTHWC+RC++ V+L G++ VC  C GGFV+ELD M +  P D F +H G    ++  
Sbjct: 3   SSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEELD-MAQASPFDMFRSHRGVVERDQTF 62

Query: 62  GLLDLFSNFMRQRLIDRN---DMRGRLESIPDHDHGSGFGPWLIFGGQIPVRLSGHGGFE 121
            L+D FS FMR RL +R+   ++RGR  S    ++  G  P LIFGGQ+P RL+G    E
Sbjct: 63  DLMDAFSVFMRNRLAERSHDREIRGRTIS-SGPENFPGLAPLLIFGGQVPYRLTGDNAVE 122

Query: 122 AFFN-GVPGIGQTTDADHPQHLDLQSMQCLLLKLRKDTS---VPPASRSSIDAMPVVKIT 181
           A FN G PGIG  T  +   +     ++ L  +L   T+    PPA RS+IDA+P +KI 
Sbjct: 123 ALFNGGSPGIG-ITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 182

Query: 182 QRHIR-SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGS 241
           QRH+R S+S+CPVC+D+FELGSEA++MPC+H+YHSDCIVPWLVQHNSCPVCRQELP+  S
Sbjct: 183 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS-AS 242

Query: 242 GGSHSSSGS----NNLSRNSRERENSRTN-QGRRNPFSSLWPFRASSSDSNHSATTG--- 301
           G S S + +    N  S +S    NSR N   RRNPFSS WPFR+S S S+ +   G   
Sbjct: 243 GPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTR 302

Query: 302 ----SSSPALHESTQHQ---TGYSGWPFD 307
               S     +   QHQ    GYSGWPFD
Sbjct: 303 NSDTSDENHNYHQQQHQQSYMGYSGWPFD 327

[Close]

BLAST of CmaCh00G002370 vs. TAIR 10
Match: AT2G40830.3 (RING-H2 finger C1A )

HSP 1 Score: 271.9 bits (694), Expect = 6.1e-73
Identity = 163/329 (49.54%), Postives = 209/329 (63.53%), Query Frame = 0


Query: 2   SSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAH-GHEYHNRRL 61
           SSRNTHWC+RC++ V+L G++ VC  C GGFV+ELD M +  P D F +H G    ++  
Sbjct: 3   SSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEELD-MAQASPFDMFRSHRGVVERDQTF 62

Query: 62  GLLDLFSNFMRQRLIDRN---DMRGRLESIPDHDHGSGFGPWLIFGGQIPVRLSGHGGFE 121
            L+D FS FMR RL +R+   ++RGR  S    ++  G  P LIFGGQ+P RL+G    E
Sbjct: 63  DLMDAFSVFMRNRLAERSHDREIRGRTIS-SGPENFPGLAPLLIFGGQVPYRLTGDNAVE 122

Query: 122 AFFN-GVPGIGQTTDADHPQHLDLQSMQCLLLKLRKDTS---VPPASRSSIDAMPVVKIT 181
           A FN G PGIG  T  +   +     ++ L  +L   T+    PPA RS+IDA+P +KI 
Sbjct: 123 ALFNGGSPGIG-ITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 182

Query: 182 QRHIR-SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGS 241
           QRH+R S+S+CPVC+D+FELGSEA++MPC+H+YHSDCIVPWLVQHNSCPVCRQELP+  S
Sbjct: 183 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS-AS 242

Query: 242 GGSHSSSGS----NNLSRNSRERENSRTN-QGRRNPFSSLWPFRASSSDSNHSATTG--- 301
           G S S + +    N  S +S    NSR N   RRNPFSS WPFR+S S S+ +   G   
Sbjct: 243 GPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTR 302

Query: 302 ----SSSPALHESTQHQ---TGYSGWPFD 307
               S     +   QHQ    GYSGWPFD
Sbjct: 303 NSDTSDENHNYHQQQHQQSYMGYSGWPFD 327

[Close]

BLAST of CmaCh00G002370 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein )

HSP 1 Score: 262.7 bits (670), Expect = 3.7e-70
Identity = 157/333 (47.15%), Postives = 204/333 (61.26%), Query Frame = 0


Query: 2   SSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRLG 61
           S RNTHWC+RC++ V LR RD VC+ C GGFV+E+D    R       AH     +    
Sbjct: 3   SIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEIDIGPSR-------AHRDVERDPTFD 62

Query: 62  LLDLFSNFMRQRLIDRN---DMRGRLESIPDHDHGSGFGPWLIFGGQIPVRLSG--HGGF 121
           L++ FS FMR RL +R+   ++ GRL S       S   P LIFGGQ P RL+G  +   
Sbjct: 63  LMEAFSAFMRSRLAERSYDREISGRLGSAGSESF-SNLAPLLIFGGQAPFRLAGGDNSSV 122

Query: 122 EAFFNG-VPGIGQTTDADHPQHLDLQSMQCLLLKLRKDT---SVPPASRSSIDAMPVVKI 181
           EAF NG  PGIG     +   +     ++ L+ +L   T     PPA +SSIDA+P +KI
Sbjct: 123 EAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIKI 182

Query: 182 TQRHIR-SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQG 241
           TQ+H++ S+SHCPVC+D+FEL SEA++MPC H+YHSDCIVPWLVQHNSCPVCR+ELP++G
Sbjct: 183 TQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRG 242

Query: 242 SGGSHSSSGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSS-------DSNHSATTG 301
           S    SSS  ++ +R++  RENSR    RRN FS+LWPFR+SSS       D+N++AT  
Sbjct: 243 S----SSSTQSSQNRSTNGRENSR----RRNIFSNLWPFRSSSSSSTQNRRDTNNTATAE 302

Query: 302 SSSPALHESTQHQ-----------TGYSGWPFD 307
                 H+  Q Q            GYSGWPFD
Sbjct: 303 EGHYHHHQQQQQQHQHQHQQQQSHMGYSGWPFD 319

[Close]

BLAST of CmaCh00G002370 vs. TAIR 10
Match: AT3G56580.1 (RING/U-box superfamily protein )

HSP 1 Score: 262.7 bits (670), Expect = 3.7e-70
Identity = 157/333 (47.15%), Postives = 204/333 (61.26%), Query Frame = 0


Query: 2   SSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRLG 61
           S RNTHWC+RC++ V LR RD VC+ C GGFV+E+D    R       AH     +    
Sbjct: 3   SIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEIDIGPSR-------AHRDVERDPTFD 62

Query: 62  LLDLFSNFMRQRLIDRN---DMRGRLESIPDHDHGSGFGPWLIFGGQIPVRLSG--HGGF 121
           L++ FS FMR RL +R+   ++ GRL S       S   P LIFGGQ P RL+G  +   
Sbjct: 63  LMEAFSAFMRSRLAERSYDREISGRLGSAGSESF-SNLAPLLIFGGQAPFRLAGGDNSSV 122

Query: 122 EAFFNG-VPGIGQTTDADHPQHLDLQSMQCLLLKLRKDT---SVPPASRSSIDAMPVVKI 181
           EAF NG  PGIG     +   +     ++ L+ +L   T     PPA +SSIDA+P +KI
Sbjct: 123 EAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIKI 182

Query: 182 TQRHIR-SNSHCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQG 241
           TQ+H++ S+SHCPVC+D+FEL SEA++MPC H+YHSDCIVPWLVQHNSCPVCR+ELP++G
Sbjct: 183 TQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRG 242

Query: 242 SGGSHSSSGSNNLSRNSRERENSRTNQGRRNPFSSLWPFRASSS-------DSNHSATTG 301
           S    SSS  ++ +R++  RENSR    RRN FS+LWPFR+SSS       D+N++AT  
Sbjct: 243 S----SSSTQSSQNRSTNGRENSR----RRNIFSNLWPFRSSSSSSTQNRRDTNNTATAE 302

Query: 302 SSSPALHESTQHQ-----------TGYSGWPFD 307
                 H+  Q Q            GYSGWPFD
Sbjct: 303 EGHYHHHQQQQQQHQHQHQQQQSHMGYSGWPFD 319

The following BLAST results are available for this feature:

BLAST of CmaCh00G002370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22197	8.6e-72	49.54	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q94AK4	5.2e-69	47.15	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]
P0CH30	7.9e-25	28.38	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q8LPN7	7.9e-25	27.30	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q9BV68	6.2e-22	43.22	E3 ubiquitin-protein ligase RNF126 OS=Homo sapiens OX=9606 GN=RNF126 PE=1 SV=2	[more]

BLAST of CmaCh00G002370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IB00	6.9e-157	90.26	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111473444 P...	[more]
A0A6J1FK80	7.1e-154	88.64	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111446055...	[more]
A0A0A0LCH6	1.1e-141	81.17	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G822250 PE...	[more]
A0A5A7UFI3	1.2e-140	80.52	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3B774	1.2e-140	80.52	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103486912 PE=4 ...	[more]

BLAST of CmaCh00G002370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022974705.1	1.4e-156	90.26	probable E3 ubiquitin-protein ligase RHC1A isoform X1 [Cucurbita maxima] >XP_022...	[more]
XP_023539608.1	1.0e-154	88.96	probable E3 ubiquitin-protein ligase RHC1A [Cucurbita pepo subsp. pepo]	[more]
KAG7028452.1	1.3e-154	89.29	putative E3 ubiquitin-protein ligase RHC1A, partial [Cucurbita argyrosperma subs...	[more]
XP_022940469.1	1.5e-153	88.64	probable E3 ubiquitin-protein ligase RHC1A [Cucurbita moschata]	[more]
XP_004136656.1	2.2e-141	81.17	probable E3 ubiquitin-protein ligase RHC1A [Cucumis sativus] >KGN59473.1 hypothe...	[more]

BLAST of CmaCh00G002370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40830.2	6.1e-73	49.54	RING-H2 finger C1A	[more]
AT2G40830.1	6.1e-73	49.54	RING-H2 finger C1A	[more]
AT2G40830.3	6.1e-73	49.54	RING-H2 finger C1A	[more]
AT3G56580.2	3.7e-70	47.15	RING/U-box superfamily protein	[more]
AT3G56580.1	3.7e-70	47.15	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 183..223 e-value: 2.4E-6 score: 37.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 182..224 e-value: 1.0E-11 score: 45.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 183..224 score: 12.061441
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 5..36 e-value: 6.9E-9 score: 35.8
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 148..230 e-value: 6.9E-22 score: 78.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..306
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..306
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..247
None	No IPR available	PANTHER	PTHR15710:SF83	E3 UBIQUITIN-PROTEIN LIGASE RHC1A-RELATED	coord: 2..302
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 2..302
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 183..224 e-value: 1.40647E-22 score: 86.2176
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 163..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G002370.1	CmaCh00G002370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0061630	ubiquitin protein ligase activity