CmaCh00G001710 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh00G001710
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	NADH dehydrogenase subunit 7
Location	Cma_Chr00: 10536572 .. 10537306 (+)
RNA-Seq Expression	CmaCh00G001710
Synteny	CmaCh00G001710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGCTTCAACCGCAGTTTCAACTACCAAAAAGCTAAGTTGGCTTGACGAGCCCAGATGTGATGAGGAAGCAGGAGCAATGAAACAACAAATCTCTCGCTTAAGGTTTTCATCGTAAGGGGCAAAAAGAAGAGCTTTTTCTACTGAGAAAGCGAACGGTCAGCGCGAAGGTTCAAGACTTAGCCGAGCATTAGCGAAGCGCTGTAGTAGTGTTGAAGCCCTATGTGCTATAATGCTGAGCCAAGGACGGACGCTCCGCTTTATCTATAGAAGCAGTCAACTGAGTTCTGAACGAATTAGCTGCTCCTTGGTAATGCCTCAATCTATAGATAGAAAGCCCTATGATGGGAAACTACCACGTTAGGTTTGGAGAGAGATGGGACCGGTATATTCTCATAGGGGGAGCAGATGCAAGCTTTTTCTTTCAATAGCCGGTCAAATGACTACAGGATCATCATCGGTCTACTCTACCTCATTTCACCATTTCGAACTTTATACAGAAGGTTTTTCCGTACCAGCTTCTTCTACCTATACCGTAGTGGAAGCACCTAAAAGTGAATTTGGTGTCTTTCTGGTCAGTAATGGAAGCAATCGTCCCTACCGTTGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGGACAAACATCACATGCCAGCAGATGTAGTCACCATCATTGGTACTCAAGATATTGTGTCTGGAGAGGTAGATAGATAG

mRNA sequence

ATGTCCGCTTCAACCGCAGTTTCAACTACCAAAAAGCTAAGTTGGCTTGACGAGCCCAGATGTGATGAGGAAGCAGGAGCAATGAAACAACAAATCTCTCGCTTAAGGTTTTCATCGGGGAGCAGATGCAAGCTTTTTCTTTCAATAGCCGGTCAAATGACTACAGGATCATCATCGGTCTACTCTACCTCATTTCACCATTTCGAACTTTATACAGAAGGTTTTTCCGTACCAGCTTCTTCTACCTATACCGTAGTGGAAGCACCTAAAAGTGAATTTGGTGTCTTTCTGGTCAGTAATGGAAGCAATCGTCCCTACCGTTGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGGACAAACATCACATGCCAGCAGATGTAGTCACCATCATTGGTACTCAAGATATTGTGTCTGGAGAGGTAGATAGATAG

Coding sequence (CDS)

ATGTCCGCTTCAACCGCAGTTTCAACTACCAAAAAGCTAAGTTGGCTTGACGAGCCCAGATGTGATGAGGAAGCAGGAGCAATGAAACAACAAATCTCTCGCTTAAGGTTTTCATCGGGGAGCAGATGCAAGCTTTTTCTTTCAATAGCCGGTCAAATGACTACAGGATCATCATCGGTCTACTCTACCTCATTTCACCATTTCGAACTTTATACAGAAGGTTTTTCCGTACCAGCTTCTTCTACCTATACCGTAGTGGAAGCACCTAAAAGTGAATTTGGTGTCTTTCTGGTCAGTAATGGAAGCAATCGTCCCTACCGTTGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGGACAAACATCACATGCCAGCAGATGTAGTCACCATCATTGGTACTCAAGATATTGTGTCTGGAGAGGTAGATAGATAG

Protein sequence

MSASTAVSTTKKLSWLDEPRCDEEAGAMKQQISRLRFSSGSRCKLFLSIAGQMTTGSSSVYSTSFHHFELYTEGFSVPASSTYTVVEAPKSEFGVFLVSNGSNRPYRCKIRAPGSAHSQGLDSMDKHHMPADVVTIIGTQDIVSGEVDR

Homology

[Close]

BLAST of CmaCh00G001710 vs. ExPASy Swiss-Prot
Match: P93306 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana OX=3702 GN=NAD7 PE=1 SV=2)

HSP 1 Score: 159.5 bits (402), Expect = 3.0e-38
Identity = 82/109 (75.23%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 41  SRCKLFLSIAGQMTTGSSSVYSTSFHHFELYTEGFSVPASSTYTVVEAPKSEFGVFLVSN 100
           SRC++ LS+             +S HHFELYTEGFSVPASSTYT VEAPK EFGVFLVSN
Sbjct: 298 SRCRMKLSM------------ESSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSN 357

Query: 101 GSNRPYRCKIRAPGSAHSQGLDSMDKHHMPADVVTIIGTQDIVSGEVDR 150
           GSNRPYRCKIRAPG AH QGLD M KHHM ADVVTIIGTQDIV GEVDR
Sbjct: 358 GSNRPYRCKIRAPGFAHLQGLDFMSKHHMLADVVTIIGTQDIVFGEVDR 394

[Close]

BLAST of CmaCh00G001710 vs. ExPASy Swiss-Prot
Match: Q36450 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris OX=4096 GN=NAD7 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.6e-37
Identity = 77/87 (88.51%), Postives = 78/87 (89.66%), Query Frame = 0


Query: 63  TSFHHFELYTEGFSVPASSTYTVVEAPKSEFGVFLVSNGSNRPYRCKIRAPGSAHSQGLD 122
           +S HHFE YTEGFSVPA STYT VEAPK EFGVFLVSNGSNRPYR KIRAP  AHSQGLD
Sbjct: 308 SSIHHFEPYTEGFSVPAPSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPCFAHSQGLD 367

Query: 123 SMDKHHMPADVVTIIGTQDIVSGEVDR 150
           SM KHHMPADVVTIIGTQDIVSGEVDR
Sbjct: 368 SMSKHHMPADVVTIIGTQDIVSGEVDR 394

[Close]

BLAST of CmaCh00G001710 vs. ExPASy Swiss-Prot
Match: Q9TC96 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nephroselmis olivacea OX=31312 GN=NAD7 PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.9e-32
Identity = 66/84 (78.57%), Postives = 73/84 (86.90%), Query Frame = 0


Query: 66  HHFELYTEGFSVPASSTYTVVEAPKSEFGVFLVSNGSNRPYRCKIRAPGSAHSQGLDSMD 125
           HHF+L+TEG++VP S TYT VEAPK EFGV+LVSNG+NRPYRCKIRAPG  H QGLD M 
Sbjct: 315 HHFKLFTEGYTVPNSETYTSVEAPKGEFGVYLVSNGTNRPYRCKIRAPGFLHLQGLDMMS 374

Query: 126 KHHMPADVVTIIGTQDIVSGEVDR 150
           K+HM ADVVTIIGTQDIV GEVDR
Sbjct: 375 KNHMLADVVTIIGTQDIVFGEVDR 398

[Close]

BLAST of CmaCh00G001710 vs. ExPASy Swiss-Prot
Match: Q37619 (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Prototheca wickerhamii OX=3111 GN=NAD7 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.7e-31
Identity = 64/84 (76.19%), Postives = 71/84 (84.52%), Query Frame = 0


Query: 66  HHFELYTEGFSVPASSTYTVVEAPKSEFGVFLVSNGSNRPYRCKIRAPGSAHSQGLDSMD 125
           HHF+ YT GF VPA  TYT VEAPK EFGV+LVSNG+++PYRCKIRAPG AH QGLD M 
Sbjct: 317 HHFKFYTGGFVVPAGETYTAVEAPKGEFGVYLVSNGTSKPYRCKIRAPGFAHLQGLDFMA 376

Query: 126 KHHMPADVVTIIGTQDIVSGEVDR 150
           ++HM ADVVTIIGTQDIV GEVDR
Sbjct: 377 RNHMLADVVTIIGTQDIVFGEVDR 400

[Close]

BLAST of CmaCh00G001710 vs. ExPASy Swiss-Prot
Match: O21270 (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Reclinomonas americana OX=48483 GN=NAD7 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.0e-31
Identity = 63/84 (75.00%), Postives = 72/84 (85.71%), Query Frame = 0


Query: 66  HHFELYTEGFSVPASSTYTVVEAPKSEFGVFLVSNGSNRPYRCKIRAPGSAHSQGLDSMD 125
           HHF+LYTEG+SVP   TYT VEAPK EFGV+LVS+GS++PYRCKI+APG +H QGL+ M 
Sbjct: 313 HHFKLYTEGYSVPIGETYTAVEAPKGEFGVYLVSDGSSKPYRCKIKAPGFSHLQGLNFMS 372

Query: 126 KHHMPADVVTIIGTQDIVSGEVDR 150
           K HM ADVVTIIGTQDIV GEVDR
Sbjct: 373 KGHMIADVVTIIGTQDIVFGEVDR 396

[Close]

BLAST of CmaCh00G001710 vs. ExPASy TrEMBL
Match: A0A1Y3BVB1 (Putative niFe hydrogenase-like protein OS=Helianthus annuus OX=4232 GN=HannXRQ_MTg0579581 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 8.8e-49
Identity = 108/133 (81.20%), Postives = 110/133 (82.71%), Query Frame = 0


Query: 17  DEPRCDEEAGAMKQQISRLRFSSGSRCKLFLSIAGQMTTGSSSVYSTSFHHFELYTEGFS 76
           D   C      MK  +S    + GSRCKLFLSIAGQMTTG SSVYSTS HHFE YTEGFS
Sbjct: 346 DRKLCPPSRSRMK--LSMESCAVGSRCKLFLSIAGQMTTG-SSVYSTSIHHFEPYTEGFS 405

Query: 77  VPASSTYTVVEAPKSEFGVFLVSNGSNRPYRCKIRAPGSAHSQGLDSMDKHHMPADVVTI 136
           VPASSTYT VEAPK EFGVFLVSNGSNRPYR KIRAPGSAHSQGLDSM KHHMPADVVTI
Sbjct: 406 VPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTI 465

Query: 137 IGTQDIVSGEVDR 150
           IGTQDIVSGEVDR
Sbjct: 466 IGTQDIVSGEVDR 475

[Close]

BLAST of CmaCh00G001710 vs. ExPASy TrEMBL
Match: A0A151UDY3 (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Cajanus cajan OX=3821 GN=KK1_046510 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 9.7e-48
Identity = 103/117 (88.03%), Postives = 105/117 (89.74%), Query Frame = 0


Query: 33  SRLRFSSGSRCKLFLSIAGQMTTGSSSVYSTSFHHFELYTEGFSVPASSTYTVVEAPKSE 92
           S L  +  SRCKLFLSIAG+MTTG SSVYSTS HHFELYTEGFSVPA STYT VEAPK E
Sbjct: 12  SDLLLNRESRCKLFLSIAGKMTTG-SSVYSTSIHHFELYTEGFSVPAPSTYTAVEAPKGE 71

Query: 93  FGVFLVSNGSNRPYRCKIRAPGSAHSQGLDSMDKHHMPADVVTIIGTQDIVSGEVDR 150
           FGVFLVSNGSNRPYR KIRAPGSAHSQGLDSM KHHMPADVVTIIGTQDIVSGEVDR
Sbjct: 72  FGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 127

[Close]

BLAST of CmaCh00G001710 vs. ExPASy TrEMBL
Match: A0A7J6DV61 (Complex1_49kDa domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_002328 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 9.7e-48
Identity = 102/113 (90.27%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 34  RLRFSSGSRCKLFLSIAGQMTTGSSSVYSTSFHHFELYTEGFSVPASSTYTVVEAPKSEF 93
           +L   SGSRCKLFLSIAGQMTTG SSVYSTS HHFE YTEGFSVPASSTYT VEAPK EF
Sbjct: 228 KLSMESGSRCKLFLSIAGQMTTG-SSVYSTSIHHFEPYTEGFSVPASSTYTAVEAPKGEF 287

Query: 94  GVFLVSNGSNRPYRCKIRAPGSAHSQGLDSMDKHHMPADVVTIIGTQDIVSGE 147
           GVFLVSNGSNRPYR KIRAPGSAHSQGLDSM KHHMPADVVTIIGTQDIVSGE
Sbjct: 288 GVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 339

[Close]

BLAST of CmaCh00G001710 vs. ExPASy TrEMBL
Match: D7TKS7 (Complex1_49kDa domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_00s0246g00010 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.3e-47
Identity = 101/113 (89.38%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 37  FSSGSRCKLFLSIAGQMTTGSSSVYSTSFHHFELYTEGFSVPASSTYTVVEAPKSEFGVF 96
           ++ GSRCKLFLSIAGQMTTG SSVYSTS HHFE YTEGF VPA STYT VEAPK EFGVF
Sbjct: 274 YNRGSRCKLFLSIAGQMTTG-SSVYSTSIHHFEPYTEGFFVPAPSTYTAVEAPKGEFGVF 333

Query: 97  LVSNGSNRPYRCKIRAPGSAHSQGLDSMDKHHMPADVVTIIGTQDIVSGEVDR 150
           LVSNGSNRPYR KIRAPGSAHSQGLDSM KHHMPADVVTIIGTQDIVSGEVDR
Sbjct: 334 LVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 385

[Close]

BLAST of CmaCh00G001710 vs. ExPASy TrEMBL
Match: A0A1S3X6J4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like OS=Nicotiana tabacum OX=4097 GN=LOC107761612 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.3e-47
Identity = 101/113 (89.38%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 37  FSSGSRCKLFLSIAGQMTTGSSSVYSTSFHHFELYTEGFSVPASSTYTVVEAPKSEFGVF 96
           ++ GSRCKLFLSIAGQMTTG SSVYSTS HHFE YTEGFSVPA STYT VEAPK EFGVF
Sbjct: 90  YNRGSRCKLFLSIAGQMTTG-SSVYSTSIHHFEPYTEGFSVPAPSTYTAVEAPKGEFGVF 149

Query: 97  LVSNGSNRPYRCKIRAPGSAHSQGLDSMDKHHMPADVVTIIGTQDIVSGEVDR 150
           LVSNGSNRPYR KIRAPG AHSQGLDSM KHHMPADVVTIIGTQDIVSGEVDR
Sbjct: 150 LVSNGSNRPYRRKIRAPGFAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 201

[Close]

BLAST of CmaCh00G001710 vs. NCBI nr
Match: KAF8364950.1 (hypothetical protein HHK36_033029 [Tetracentron sinense] >KAF8376884.1 hypothetical protein HHK36_031389 [Tetracentron sinense])

HSP 1 Score: 201.4 bits (511), Expect = 5.3e-48
Identity = 102/113 (90.27%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 37  FSSGSRCKLFLSIAGQMTTGSSSVYSTSFHHFELYTEGFSVPASSTYTVVEAPKSEFGVF 96
           ++ GSRCKLFLSIAGQMTTG SSVYSTS HHFE YTEGFSVPA STYT VEAPK EFGVF
Sbjct: 465 YNRGSRCKLFLSIAGQMTTG-SSVYSTSIHHFEPYTEGFSVPAPSTYTAVEAPKGEFGVF 524

Query: 97  LVSNGSNRPYRCKIRAPGSAHSQGLDSMDKHHMPADVVTIIGTQDIVSGEVDR 150
           LVSNGSNRPYR KIRAPGSAHSQGLDSM KHHMPADVVTIIGTQDIVSGEVDR
Sbjct: 525 LVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 576

[Close]

BLAST of CmaCh00G001710 vs. NCBI nr
Match: KAG8362771.1 (hypothetical protein BUALT_BualtUnG0042100 [Buddleja alternifolia] >KAG8363164.1 hypothetical protein BUALT_BualtMtG0003100 [Buddleja alternifolia])

HSP 1 Score: 201.1 bits (510), Expect = 6.9e-48
Identity = 102/113 (90.27%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 37  FSSGSRCKLFLSIAGQMTTGSSSVYSTSFHHFELYTEGFSVPASSTYTVVEAPKSEFGVF 96
           ++ GSRCKLFLSIAGQMTTG SSVYSTS HHFE YTEGFSVPASSTYT VEAPK EFGVF
Sbjct: 456 YNRGSRCKLFLSIAGQMTTG-SSVYSTSIHHFEPYTEGFSVPASSTYTAVEAPKGEFGVF 515

Query: 97  LVSNGSNRPYRCKIRAPGSAHSQGLDSMDKHHMPADVVTIIGTQDIVSGEVDR 150
           LVSNGSNRPYR KIRAPG AHSQGLDSM KHHMPADVVTIIGTQDIVSGEVDR
Sbjct: 516 LVSNGSNRPYRRKIRAPGFAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 567

[Close]

BLAST of CmaCh00G001710 vs. NCBI nr
Match: KAG6467658.1 (hypothetical protein ZIOFF_074501 [Zingiber officinale])

HSP 1 Score: 199.9 bits (507), Expect = 1.5e-47
Identity = 101/110 (91.82%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 40  GSRCKLFLSIAGQMTTGSSSVYSTSFHHFELYTEGFSVPASSTYTVVEAPKSEFGVFLVS 99
           GSRCKLFLSIAGQMTTG SSVYSTS HHFE YTEGFSVPA STYT VEAPK EFGVFLVS
Sbjct: 7   GSRCKLFLSIAGQMTTG-SSVYSTSIHHFEPYTEGFSVPAPSTYTAVEAPKGEFGVFLVS 66

Query: 100 NGSNRPYRCKIRAPGSAHSQGLDSMDKHHMPADVVTIIGTQDIVSGEVDR 150
           N SNRPYRC+IRAPGSAHSQGLDSM KHHMPADVVTIIGTQDIVSGEVDR
Sbjct: 67  NYSNRPYRCQIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 115

[Close]

BLAST of CmaCh00G001710 vs. NCBI nr
Match: KYP77515.1 (NADH-ubiquinone oxidoreductase 49 kDa subunit [Cajanus cajan])

HSP 1 Score: 199.5 bits (506), Expect = 2.0e-47
Identity = 103/117 (88.03%), Postives = 105/117 (89.74%), Query Frame = 0


Query: 33  SRLRFSSGSRCKLFLSIAGQMTTGSSSVYSTSFHHFELYTEGFSVPASSTYTVVEAPKSE 92
           S L  +  SRCKLFLSIAG+MTTG SSVYSTS HHFELYTEGFSVPA STYT VEAPK E
Sbjct: 12  SDLLLNRESRCKLFLSIAGKMTTG-SSVYSTSIHHFELYTEGFSVPAPSTYTAVEAPKGE 71

Query: 93  FGVFLVSNGSNRPYRCKIRAPGSAHSQGLDSMDKHHMPADVVTIIGTQDIVSGEVDR 150
           FGVFLVSNGSNRPYR KIRAPGSAHSQGLDSM KHHMPADVVTIIGTQDIVSGEVDR
Sbjct: 72  FGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEVDR 127

[Close]

BLAST of CmaCh00G001710 vs. NCBI nr
Match: KAF4349906.1 (hypothetical protein G4B88_002328 [Cannabis sativa])

HSP 1 Score: 199.5 bits (506), Expect = 2.0e-47
Identity = 102/113 (90.27%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 34  RLRFSSGSRCKLFLSIAGQMTTGSSSVYSTSFHHFELYTEGFSVPASSTYTVVEAPKSEF 93
           +L   SGSRCKLFLSIAGQMTTG SSVYSTS HHFE YTEGFSVPASSTYT VEAPK EF
Sbjct: 228 KLSMESGSRCKLFLSIAGQMTTG-SSVYSTSIHHFEPYTEGFSVPASSTYTAVEAPKGEF 287

Query: 94  GVFLVSNGSNRPYRCKIRAPGSAHSQGLDSMDKHHMPADVVTIIGTQDIVSGE 147
           GVFLVSNGSNRPYR KIRAPGSAHSQGLDSM KHHMPADVVTIIGTQDIVSGE
Sbjct: 288 GVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGE 339

[Close]

BLAST of CmaCh00G001710 vs. TAIR 10
Match: ATMG00510.1 (NADH dehydrogenase subunit 7 )

HSP 1 Score: 165.6 bits (418), Expect = 3.0e-41
Identity = 85/109 (77.98%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 41  SRCKLFLSIAGQMTTGSSSVYSTSFHHFELYTEGFSVPASSTYTVVEAPKSEFGVFLVSN 100
           SRC++ LS+             +S HHFELYTEGFSVPASSTYT VEAPK EFGVFLVSN
Sbjct: 298 SRCRMKLSM------------ESSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSN 357

Query: 101 GSNRPYRCKIRAPGSAHSQGLDSMDKHHMPADVVTIIGTQDIVSGEVDR 150
           GSNRPYR KIRAPGSAHSQGLDSM KHHMPADVVTIIGTQDIV GEVDR
Sbjct: 358 GSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVFGEVDR 394

[Close]

BLAST of CmaCh00G001710 vs. TAIR 10
Match: ATCG01110.1 (NAD(P)H dehydrogenase subunit H )

HSP 1 Score: 68.2 bits (165), Expect = 6.5e-12
Identity = 34/75 (45.33%), Postives = 46/75 (61.33%), Query Frame = 0


Query: 75  FSVPASSTYTVVEAPKSEFGVFLVSNGSNRPYRCKIRAPGSAHSQGLDSMDKHHMPADVV 134
           F +     Y  VEAPK E G+FL+ + S  P+R KIR PG  + Q L  + K    AD++
Sbjct: 319 FELSKQELYVRVEAPKGELGIFLIGDQSGFPWRWKIRPPGFINLQILPELVKRMKLADIM 378

Query: 135 TIIGTQDIVSGEVDR 150
           TI+G+ DI+ GEVDR
Sbjct: 379 TILGSIDIIMGEVDR 393

The following BLAST results are available for this feature:

BLAST of CmaCh00G001710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93306	3.0e-38	75.23	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana OX...	[more]
Q36450	2.6e-37	88.51	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris OX...	[more]
Q9TC96	1.9e-32	78.57	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nephroselmis olivacea O...	[more]
Q37619	4.7e-31	76.19	NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Prototheca wickerhamii OX=3111 ...	[more]
O21270	8.0e-31	75.00	NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Reclinomonas americana OX=48483...	[more]

BLAST of CmaCh00G001710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1Y3BVB1	8.8e-49	81.20	Putative niFe hydrogenase-like protein OS=Helianthus annuus OX=4232 GN=HannXRQ_M...	[more]
A0A151UDY3	9.7e-48	88.03	NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Cajanus cajan OX=3821 GN=KK1_04...	[more]
A0A7J6DV61	9.7e-48	90.27	Complex1_49kDa domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_002...	[more]
D7TKS7	1.3e-47	89.38	Complex1_49kDa domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_00s02...	[more]
A0A1S3X6J4	1.3e-47	89.38	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like OS=Nicotiana tabacum ...	[more]

BLAST of CmaCh00G001710 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF8364950.1	5.3e-48	90.27	hypothetical protein HHK36_033029 [Tetracentron sinense] >KAF8376884.1 hypotheti...	[more]
KAG8362771.1	6.9e-48	90.27	hypothetical protein BUALT_BualtUnG0042100 [Buddleja alternifolia] >KAG8363164.1...	[more]
KAG6467658.1	1.5e-47	91.82	hypothetical protein ZIOFF_074501 [Zingiber officinale]	[more]
KYP77515.1	2.0e-47	88.03	NADH-ubiquinone oxidoreductase 49 kDa subunit [Cajanus cajan]	[more]
KAF4349906.1	2.0e-47	90.27	hypothetical protein G4B88_002328 [Cannabis sativa]	[more]

BLAST of CmaCh00G001710 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00510.1	3.0e-41	77.98	NADH dehydrogenase subunit 7	[more]
ATCG01110.1	6.5e-12	45.33	NAD(P)H dehydrogenase subunit H	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029014	[NiFe]-hydrogenase, large subunit	GENE3D	1.10.645.10		coord: 17..149 e-value: 4.8E-31 score: 109.8
IPR029014	[NiFe]-hydrogenase, large subunit	SUPERFAMILY	56762	HydB/Nqo4-like	coord: 62..149
IPR001135	NADH-quinone oxidoreductase, subunit D	PFAM	PF00346	Complex1_49kDa	coord: 61..149 e-value: 6.8E-28 score: 97.5
None	No IPR available	PANTHER	PTHR11993:SF10	NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 2, MITOCHONDRIAL	coord: 50..149
IPR022885	NAD(P)H-quinone oxidoreductase subunit D/H	PANTHER	PTHR11993	NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT	coord: 50..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G001710.1	CmaCh00G001710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H