CmaCh00G001570 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh00G001570
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	PAP_fibrillin domain-containing protein
Location	Cma_Chr00: 10469542 .. 10471404 (-)
RNA-Seq Expression	CmaCh00G001570
Synteny	CmaCh00G001570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGATCACATAATTTTCTCATTATGGCCAAATCCCTCTCCCTTCCATCGCGTCCCTTCAATTCCCCTTCTTCTTCCATTGGAACCCATCTCTCTCAACCCCCCAAAATCTCTTGTTCTTCCATATCCATTCAATCTCAATCACCCAAAGACCAACTCCTCGCCCTCATCTCCGACCAAGAAAGAGGTCTCAAGACCCAGAAAAGCCCTCAGAAACTTGCTTCAATTGTGAAATCAATCGACGCCTTGGCGTCTCTGGCCCCGAATTCTGTCACAACGGACGATTCACTTTCTGCGACATGGCGTCTTCTATGGACCACTGAGAAAGAGCAGCTGTTCATCATTGAGAAGGCTCACTTGTTTGGTACTCAAGCTGGGGATGTTTTGCAGGTGATTGATGTCAAGAAAAAGAGTCTTAATAATGTCATCACTTTTCCTCCAGATGGGGTTTTCTTCGTTCGATCCAGCATTGAAGTTGCTTCCTCTCAGAGAGTGAATTTTAGGTATGTTCTCTCTGCCTCTGCTTTTAATCCATACCAATGTGCCTTTAATTTAGTGTTCATAGATGAATTGCTGTTTCAATTCAATGGTTGTATTTTAAAGCAATCAAATTAGCATATAATGTACATTTGATTTGATATTGAGTTTGAATCTGGGTGTTTAGATTTACAAGTGCTGTTCTGCGAGGAAAAAATTGGGAAATTCCTTTGCCACCATTCGGACAGGGCTGGTGAGTTAATTATCTTTATGAGTTCCCTTTTGTTCACTTTTTTATATATGGTTAATATTTATATGACATGTCTGAAATATTTGATATTAAACTCTGAGTTCACCATGTTCTTGCTGTAACAATTGATTTTGTTCGATCAATAATAGAATCAAAAGCTGGGACAAATTATAGACTGAGACTCATCAATGACTTCAATCCCTGATACATCAAAAACTCCACCTTCTGTCTCTACAAAAAGCTGATTCTCGGACAACATCATCCTTCATGTTAAAAACTCCTCCATTTTCTGTGACATGGTGTAATCCATATGAATCCAAGGGGGTTTGAAAAGTCAAAGAGAGAATTCTATTGAAGATATGTGAGATTCCACATCGGTTAGGGAGGAGAACGAAACCTTCTTTATAAAGGAGTGGAAACCTCTCCCTAGCAGACGCGTTTCAAACACCTTGAGGAGAAGCTCGAAAGGAAAAGTCCAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCCGTTACAAATGGTATCAGAGCCAGATACCAGGGGATGTGCCGAGGAGGCTGAGTCCCAAAGGACGTGGACACGAGGGGGTGTGCCAGCAAGGAGGCCGAGCCTTGAAGGGGATGGATTGTGAGATCCCACATCGGTTGGGGAGGAGCAGATACCAGGGAGAGGTTTTCATACTTGTTTCGTTTCCCTCTCCAACCAACGTGGGATCTCGCATTAATCCTCTTTCTTTTATATCGTACTTCTTTGTTTCTGATCTGACGGTACTGGCATTAGCTTGTTGAGGTTATTCCAAAAGAACCAATACTACTTACCAAGCAGCCCACAGCACCATTGTCTCTTTTATTCCTCCAAAGAATCACGGACATGTGAAAACTGGAGTTCGATTCTATTTACTGCATGTTGATAGATGTCTTATCCTCTTATGTCTCCGGTTATAATACGAGAGCTAAACGAGTTCTACTTCTGTTATAGTCCATCCATGCCGCTGGAATCTATGTCTATCCTTCTGGAATCTGTGTCCTTATTATGCAACAGATCTCAATGTTTAGGTATTGTTGTTGTAAACCTCGAATACTATTATTTGGGCTATCCCACCTATTGGTATCAAATCTTCATATTTAAAAGTTAAAA

mRNA sequence

TGATCACATAATTTTCTCATTATGGCCAAATCCCTCTCCCTTCCATCGCGTCCCTTCAATTCCCCTTCTTCTTCCATTGGAACCCATCTCTCTCAACCCCCCAAAATCTCTTGTTCTTCCATATCCATTCAATCTCAATCACCCAAAGACCAACTCCTCGCCCTCATCTCCGACCAAGAAAGAGGTCTCAAGACCCAGAAAAGCCCTCAGAAACTTGCTTCAATTGTGAAATCAATCGACGCCTTGGCGTCTCTGGCCCCGAATTCTGTCACAACGGACGATTCACTTTCTGCGACATGGCGTCTTCTATGGACCACTGAGAAAGAGCAGCTGTTCATCATTGAGAAGGCTCACTTGTTTGGTACTCAAGCTGGGGATGTTTTGCAGGTGATTGATGTCAAGAAAAAGAGTCTTAATAATGTCATCACTTTTCCTCCAGATGGGGTTTTCTTCGTTCGATCCAGCATTGAAGTTGCTTCCTCTCAGAGAGTGAATTTTAGATTTACAAGTGCTGTTCTGCGAGGAAAAAATTGGGAAATTCCTTTGCCACCATTCGGACAGGGCTGGTGAGTTAATTATCTTTATGAGTTCCCTTTTGTTCACTTTTTTATATATGGTTAATATTTATATGACATGTCTGAAATATTTGATATTAAACTCTGAGTTCACCATGTTCTTGCTGTAACAATTGATTTTGTTCGATCAATAATAGAATCAAAAGCTGGGACAAATTATAGACTGAGACTCATCAATGACTTCAATCCCTGATACATCAAAAACTCCACCTTCTGTCTCTACAAAAAGCTGATTCTCGGACAACATCATCCTTCATGTTAAAAACTCCTCCATTTTCTGTGACATGGTGTAATCCATATGAATCCAAGGGGGTTTGAAAAGTCAAAGAGAGAATTCTATTGAAGATATGTGAGATTCCACATCGGTTAGGGAGGAGAACGAAACCTTCTTTATAAAGGAGTGGAAACCTCTCCCTAGCAGACGCGTTTCAAACACCTTGAGGAGAAGCTCGAAAGGAAAAGTCCAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCCGTTACAAATGGTATCAGAGCCAGATACCAGGGGATGTGCCGAGGAGGCTGAGTCCCAAAGGACGTGGACACGAGGGGGTGTGCCAGCAAGGAGGCCGAGCCTTGAAGGGGATGGATTGTGAGATCCCACATCGGTTGGGGAGGAGCAGATACCAGGGAGAGGTTTTCATACTTGTTTCGTTTCCCTCTCCAACCAACGTGGGATCTCGCATTAATCCTCTTTCTTTTATATCGTACTTCTTTGTTTCTGATCTGACGGTACTGGCATTAGCTTGTTGAGGTTATTCCAAAAGAACCAATACTACTTACCAAGCAGCCCACAGCACCATTGTCTCTTTTATTCCTCCAAAGAATCACGGACATGTGAAAACTGGAGTTCGATTCTATTTACTGCATGTTGATAGATGTCTTATCCTCTTATGTCTCCGGTTATAATACGAGAGCTAAACGAGTTCTACTTCTGTTATAGTCCATCCATGCCGCTGGAATCTATGTCTATCCTTCTGGAATCTGTGTCCTTATTATGCAACAGATCTCAATGTTTAGGTATTGTTGTTGTAAACCTCGAATACTATTATTTGGGCTATCCCACCTATTGGTATCAAATCTTCATATTTAAAAGTTAAAA

Coding sequence (CDS)

ATGGCCAAATCCCTCTCCCTTCCATCGCGTCCCTTCAATTCCCCTTCTTCTTCCATTGGAACCCATCTCTCTCAACCCCCCAAAATCTCTTGTTCTTCCATATCCATTCAATCTCAATCACCCAAAGACCAACTCCTCGCCCTCATCTCCGACCAAGAAAGAGGTCTCAAGACCCAGAAAAGCCCTCAGAAACTTGCTTCAATTGTGAAATCAATCGACGCCTTGGCGTCTCTGGCCCCGAATTCTGTCACAACGGACGATTCACTTTCTGCGACATGGCGTCTTCTATGGACCACTGAGAAAGAGCAGCTGTTCATCATTGAGAAGGCTCACTTGTTTGGTACTCAAGCTGGGGATGTTTTGCAGGTGATTGATGTCAAGAAAAAGAGTCTTAATAATGTCATCACTTTTCCTCCAGATGGGGTTTTCTTCGTTCGATCCAGCATTGAAGTTGCTTCCTCTCAGAGAGTGAATTTTAGATTTACAAGTGCTGTTCTGCGAGGAAAAAATTGGGAAATTCCTTTGCCACCATTCGGACAGGGCTGGTGA

Protein sequence

MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGW

Homology

[Close]

BLAST of CmaCh00G001570 vs. ExPASy Swiss-Prot
Match: O81304 (Probable plastid-lipid-associated protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP11 PE=2 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.1e-57
Identity = 109/155 (70.32%), Postives = 130/155 (83.87%), Query Frame = 0


Query: 28  KISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLAPNSVTTDD 87
           + SCS  +  +Q  K +LL LIS+++RGL+TQK P+K   IV +I+++  +  +S+TTDD
Sbjct: 23  RTSCSIFANPAQRAKRKLLELISEEDRGLRTQKDPKKRDEIVNAIESMTVIGRSSITTDD 82

Query: 88  SLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRS 147
           SLSATWRLLWTTEKEQLFIIEKA LFGT AGDVLQVIDV K+ LNNVITFPPDGVFFVRS
Sbjct: 83  SLSATWRLLWTTEKEQLFIIEKAGLFGTTAGDVLQVIDVNKRILNNVITFPPDGVFFVRS 142

Query: 148 SIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGW 183
            I++AS QRVNFRF SAVLRGKNWE+PLPPFG+GW
Sbjct: 143 DIDIASPQRVNFRFNSAVLRGKNWELPLPPFGKGW 177

[Close]

BLAST of CmaCh00G001570 vs. ExPASy TrEMBL
Match: A0A6J1KYC9 (probable plastid-lipid-associated protein 11, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499315 PE=3 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.1e-93
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60
           MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK
Sbjct: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60

Query: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120
           SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV
Sbjct: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120

Query: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180
           LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ
Sbjct: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180

Query: 181 GW 183
           GW
Sbjct: 181 GW 182

[Close]

BLAST of CmaCh00G001570 vs. ExPASy TrEMBL
Match: A0A6J1KWG2 (probable plastid-lipid-associated protein 11, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499321 PE=3 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.2e-93
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60
           MAKSLSLPSRPFNSPSSSIGTHLSQPPKI CSSISIQSQSPKDQLLALISDQERGLKTQK
Sbjct: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKIPCSSISIQSQSPKDQLLALISDQERGLKTQK 60

Query: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120
           SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV
Sbjct: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120

Query: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180
           LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ
Sbjct: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180

Query: 181 GW 183
           GW
Sbjct: 181 GW 182

[Close]

BLAST of CmaCh00G001570 vs. ExPASy TrEMBL
Match: A0A6J1KWG1 (probable plastid-lipid-associated protein 11, chloroplastic isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111499315 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.6e-92
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60
           MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK
Sbjct: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60

Query: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120
           SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV
Sbjct: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120

Query: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180
           LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ
Sbjct: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180

Query: 181 G 182
           G
Sbjct: 181 G 181

[Close]

BLAST of CmaCh00G001570 vs. ExPASy TrEMBL
Match: A0A6J1IH64 (probable plastid-lipid-associated protein 11, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472924 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.6e-92
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60
           MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK
Sbjct: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60

Query: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120
           SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV
Sbjct: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120

Query: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180
           LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ
Sbjct: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180

Query: 181 G 182
           G
Sbjct: 181 G 181

[Close]

BLAST of CmaCh00G001570 vs. ExPASy TrEMBL
Match: A0A6J1L0R0 (probable plastid-lipid-associated protein 11, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499315 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.6e-92
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60
           MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK
Sbjct: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60

Query: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120
           SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV
Sbjct: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120

Query: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180
           LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ
Sbjct: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180

Query: 181 G 182
           G
Sbjct: 181 G 181

[Close]

BLAST of CmaCh00G001570 vs. NCBI nr
Match: XP_023006656.1 (probable plastid-lipid-associated protein 11, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 352.4 bits (903), Expect = 2.3e-93
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60
           MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK
Sbjct: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60

Query: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120
           SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV
Sbjct: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120

Query: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180
           LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ
Sbjct: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180

Query: 181 GW 183
           GW
Sbjct: 181 GW 182

[Close]

BLAST of CmaCh00G001570 vs. NCBI nr
Match: XP_023006662.1 (probable plastid-lipid-associated protein 11, chloroplastic isoform X1 [Cucurbita maxima] >XP_023006663.1 probable plastid-lipid-associated protein 11, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 350.5 bits (898), Expect = 8.6e-93
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60
           MAKSLSLPSRPFNSPSSSIGTHLSQPPKI CSSISIQSQSPKDQLLALISDQERGLKTQK
Sbjct: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKIPCSSISIQSQSPKDQLLALISDQERGLKTQK 60

Query: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120
           SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV
Sbjct: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120

Query: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180
           LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ
Sbjct: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180

Query: 181 GW 183
           GW
Sbjct: 181 GW 182

[Close]

BLAST of CmaCh00G001570 vs. NCBI nr
Match: XP_023006655.1 (probable plastid-lipid-associated protein 11, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 348.6 bits (893), Expect = 3.3e-92
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60
           MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK
Sbjct: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60

Query: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120
           SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV
Sbjct: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120

Query: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180
           LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ
Sbjct: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180

Query: 181 G 182
           G
Sbjct: 181 G 181

[Close]

BLAST of CmaCh00G001570 vs. NCBI nr
Match: XP_022974291.1 (probable plastid-lipid-associated protein 11, chloroplastic isoform X3 [Cucurbita maxima] >XP_023006657.1 probable plastid-lipid-associated protein 11, chloroplastic isoform X3 [Cucurbita maxima])

HSP 1 Score: 348.6 bits (893), Expect = 3.3e-92
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60
           MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK
Sbjct: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60

Query: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120
           SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV
Sbjct: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120

Query: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180
           LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ
Sbjct: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180

Query: 181 G 182
           G
Sbjct: 181 G 181

[Close]

BLAST of CmaCh00G001570 vs. NCBI nr
Match: XP_022974290.1 (probable plastid-lipid-associated protein 11, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 348.6 bits (893), Expect = 3.3e-92
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60
           MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK
Sbjct: 1   MAKSLSLPSRPFNSPSSSIGTHLSQPPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60

Query: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120
           SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV
Sbjct: 61  SPQKLASIVKSIDALASLAPNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120

Query: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180
           LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ
Sbjct: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180

Query: 181 G 182
           G
Sbjct: 181 G 181

[Close]

BLAST of CmaCh00G001570 vs. TAIR 10
Match: AT4G00030.1 (Plastid-lipid associated protein PAP / fibrillin family protein )

HSP 1 Score: 223.4 bits (568), Expect = 1.5e-58
Identity = 109/155 (70.32%), Postives = 130/155 (83.87%), Query Frame = 0


Query: 28  KISCSSISIQSQSPKDQLLALISDQERGLKTQKSPQKLASIVKSIDALASLAPNSVTTDD 87
           + SCS  +  +Q  K +LL LIS+++RGL+TQK P+K   IV +I+++  +  +S+TTDD
Sbjct: 23  RTSCSIFANPAQRAKRKLLELISEEDRGLRTQKDPKKRDEIVNAIESMTVIGRSSITTDD 82

Query: 88  SLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDVLQVIDVKKKSLNNVITFPPDGVFFVRS 147
           SLSATWRLLWTTEKEQLFIIEKA LFGT AGDVLQVIDV K+ LNNVITFPPDGVFFVRS
Sbjct: 83  SLSATWRLLWTTEKEQLFIIEKAGLFGTTAGDVLQVIDVNKRILNNVITFPPDGVFFVRS 142

Query: 148 SIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGW 183
            I++AS QRVNFRF SAVLRGKNWE+PLPPFG+GW
Sbjct: 143 DIDIASPQRVNFRFNSAVLRGKNWELPLPPFGKGW 177

The following BLAST results are available for this feature:

BLAST of CmaCh00G001570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81304	2.1e-57	70.32	Probable plastid-lipid-associated protein 11, chloroplastic OS=Arabidopsis thali...	[more]

BLAST of CmaCh00G001570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KYC9	1.1e-93	100.00	probable plastid-lipid-associated protein 11, chloroplastic isoform X2 OS=Cucurb...	[more]
A0A6J1KWG2	4.2e-93	99.45	probable plastid-lipid-associated protein 11, chloroplastic isoform X1 OS=Cucurb...	[more]
A0A6J1KWG1	1.6e-92	100.00	probable plastid-lipid-associated protein 11, chloroplastic isoform X3 OS=Cucurb...	[more]
A0A6J1IH64	1.6e-92	100.00	probable plastid-lipid-associated protein 11, chloroplastic isoform X1 OS=Cucurb...	[more]
A0A6J1L0R0	1.6e-92	100.00	probable plastid-lipid-associated protein 11, chloroplastic isoform X1 OS=Cucurb...	[more]

BLAST of CmaCh00G001570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023006656.1	2.3e-93	100.00	probable plastid-lipid-associated protein 11, chloroplastic isoform X2 [Cucurbit...	[more]
XP_023006662.1	8.6e-93	99.45	probable plastid-lipid-associated protein 11, chloroplastic isoform X1 [Cucurbit...	[more]
XP_023006655.1	3.3e-92	100.00	probable plastid-lipid-associated protein 11, chloroplastic isoform X1 [Cucurbit...	[more]
XP_022974291.1	3.3e-92	100.00	probable plastid-lipid-associated protein 11, chloroplastic isoform X3 [Cucurbit...	[more]
XP_022974290.1	3.3e-92	100.00	probable plastid-lipid-associated protein 11, chloroplastic isoform X2 [Cucurbit...	[more]

BLAST of CmaCh00G001570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00030.1	1.5e-58	70.32	Plastid-lipid associated protein PAP / fibrillin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006843	Plastid lipid-associated protein/fibrillin conserved domain	PFAM	PF04755	PAP_fibrillin	coord: 42..168 e-value: 7.4E-29 score: 101.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR31906:SF3	PLASTID-LIPID-ASSOCIATED PROTEIN 11, CHLOROPLASTIC-RELATED	coord: 18..182
IPR039633	Plastid-lipid-associated protein	PANTHER	PTHR31906	FAMILY NOT NAMED	coord: 18..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G001570.1	CmaCh00G001570.1	mRNA