CmaCh00G001530 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh00G001530
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Gag/pol protein
Location	Cma_Chr00: 10230228 .. 10231490 (+)
RNA-Seq Expression	CmaCh00G001530
Synteny	CmaCh00G001530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGGTCTTGCGTCGCCTTGGAAGCGTCCTCCATTCGGAAGGTATTTGCATGAGTCAATAACAAGGTGAATAAAGAAAGTATTTATAGTAAGTGGGAGAAGGAAGTATGTCAACACCTCCTATGGTCTCTACCACTAGGTTGCACCGTGAGATTCCCATGTTCCATTTGCATGTTGCCCTAGAGCAACTATCCATTCGGAGGGTCGTAACATGGGAGTCGAAACAACGCAAACTCCATAAATGGATAGGATTTCTTAGGTCCGTTTCCAACTTTGGCTTTTTCATTCGATAGAGTTGTTGGGACCGATCTCTGAGGTTTAAAATGGCGGGTCACACTTACAAAGAATTACTAAGAGTTAGTATATTCTTGACCAAAATAGCGATAACTAAAAACACTATAGGAACAAGAGTTATTATGGGATTAGTGTTTAAAGTCAAAAATGTTTTGGTTTAGTGAATGAGTGATTGACTGCCCCTCGGTAGCAGTTGCTCTAACTCACTAAAGTATTGTTGCAAATTAATAATTTTTTGGTACATCATTACATTTGCTAAAACTGATTGGATTAAACAGGATTAAGTCAAATCACTAATAGAATTTTCTTTGTATCACACAGCATGACAAACTCAATAGTACAATAACTCGCTTCTGAGAAATTAAACGGCGACAATTACGTAACTTGGAAATCAAACCTAAACACAATACTGGTTATTGATGATTTAAGGTTTGTTTTAATTGAGGAATGTCCTCCAAACACCAGCTCAAATGCAAACCGAACAGTTCGGGATGCGTATGACAAATGGATAAAGGAAAATGACAAAGCCCGAGTGTACATTCTAGCCAGCATATCTGATGTTTTGGCTAAGAAACACGATGTTATGAGTACTGCTAAAGAGATTATGGAATCTCTAAAAGGGATGTTTGGACAACCATCCTTCTCCCTTAGACATGAAGCCATAAAATACATTTACAACTGTCGTATGAAAGAAGGGACCTCAGTTAGAGAACTTGTCCTGGACATGATGGTCCATTTCAATGTGGCAGAAGAAAATGAAGTTGTCATTGATGAGAAGAGTCAAGTCAGTTTTATCATGATGTCTCTTCCGAAGAGCTTCTTCCAGTTCCGCACAAATGTGGTAATGAACAAAATAGAATATAACTTGACTGCTCTTCTCAATGAGCTACAGACTTATCAATCCCTCTTAACGAACAAGAGACAAACAGGAGAAGCAAATGTTGTTATCTCCAAGAAATTACTATGA

mRNA sequence

ATGCTCGGTCTTGCGTCGCCTTGGAAGCGTCCTCCATTCGGAAGGTTGCACCGTGAGATTCCCATGTTCCATTTGCATGTTGCCCTAGAGCAACTATCCATTCGGAGGGTCGTAACATGGGAGTCGAAACAACGCAAACTCCATAAATGGATAGGATTTCTTAGGTTTGTTTTAATTGAGGAATGTCCTCCAAACACCAGCTCAAATGCAAACCGAACAGTTCGGGATGCGTATGACAAATGGATAAAGGAAAATGACAAAGCCCGAGTGTACATTCTAGCCAGCATATCTGATGTTTTGGCTAAGAAACACGATGTTATGAGTACTGCTAAAGAGATTATGGAATCTCTAAAAGGGATGTTTGGACAACCATCCTTCTCCCTTAGACATGAAGCCATAAAATACATTTACAACTGTCGTATGAAAGAAGGGACCTCAGTTAGAGAACTTGTCCTGGACATGATGGTCCATTTCAATGTGGCAGAAGAAAATGAAGTTGTCATTGATGAGAAGAGTCAAGTCAGTTTTATCATGATGTCTCTTCCGAAGAGCTTCTTCCAGTTCCGCACAAATGTGGTAATGAACAAAATAGAATATAACTTGACTGCTCTTCTCAATGAGCTACAGACTTATCAATCCCTCTTAACGAACAAGAGACAAACAGGAGAAGCAAATGTTGTTATCTCCAAGAAATTACTATGA

Coding sequence (CDS)

ATGCTCGGTCTTGCGTCGCCTTGGAAGCGTCCTCCATTCGGAAGGTTGCACCGTGAGATTCCCATGTTCCATTTGCATGTTGCCCTAGAGCAACTATCCATTCGGAGGGTCGTAACATGGGAGTCGAAACAACGCAAACTCCATAAATGGATAGGATTTCTTAGGTTTGTTTTAATTGAGGAATGTCCTCCAAACACCAGCTCAAATGCAAACCGAACAGTTCGGGATGCGTATGACAAATGGATAAAGGAAAATGACAAAGCCCGAGTGTACATTCTAGCCAGCATATCTGATGTTTTGGCTAAGAAACACGATGTTATGAGTACTGCTAAAGAGATTATGGAATCTCTAAAAGGGATGTTTGGACAACCATCCTTCTCCCTTAGACATGAAGCCATAAAATACATTTACAACTGTCGTATGAAAGAAGGGACCTCAGTTAGAGAACTTGTCCTGGACATGATGGTCCATTTCAATGTGGCAGAAGAAAATGAAGTTGTCATTGATGAGAAGAGTCAAGTCAGTTTTATCATGATGTCTCTTCCGAAGAGCTTCTTCCAGTTCCGCACAAATGTGGTAATGAACAAAATAGAATATAACTTGACTGCTCTTCTCAATGAGCTACAGACTTATCAATCCCTCTTAACGAACAAGAGACAAACAGGAGAAGCAAATGTTGTTATCTCCAAGAAATTACTATGA

Protein sequence

MLGLASPWKRPPFGRLHREIPMFHLHVALEQLSIRRVVTWESKQRKLHKWIGFLRFVLIEECPPNTSSNANRTVRDAYDKWIKENDKARVYILASISDVLAKKHDVMSTAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVRELVLDMMVHFNVAEENEVVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKRQTGEANVVISKKLL

Homology

[Close]

BLAST of CmaCh00G001530 vs. ExPASy TrEMBL
Match: A0A6J1DWG6 (uncharacterized protein LOC111025021 OS=Momordica charantia OX=3673 GN=LOC111025021 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 9.8e-63
Identity = 122/178 (68.54%), Postives = 150/178 (84.27%), Query Frame = 0


Query: 54  LRFVLIEECPPNTSSNANRTVRDAYDKWIKENDKARVYILASISDVLAKKHDVMSTAKEI 113
           LRFVL EECPP  + NANRTVRDAYD+W+K N+KARVYILASIS+VL+KKH+ ++T +EI
Sbjct: 41  LRFVLTEECPPAPAPNANRTVRDAYDRWVKANEKARVYILASISEVLSKKHERLATTREI 100

Query: 114 MESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVRELVLDMMVHFNVAEENEVVIDEKSQ 173
           M+SL+ +FGQPS +L H+A+KY+YNCRMKEG+SVRE VL+MMVHFNVAE N+ V++E SQ
Sbjct: 101 MDSLQALFGQPSTTLMHDAVKYVYNCRMKEGSSVREHVLNMMVHFNVAEVNDTVMNEISQ 160

Query: 174 VSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKRQTGEANVVISKK 232
           V FIM SLPKS+FQF+ N +MNKIEY+LT LLNELQ Y+SLL NK    EANV  + K
Sbjct: 161 VGFIMQSLPKSYFQFKINAMMNKIEYSLTTLLNELQLYESLLKNKGFEAEANVATTSK 218

[Close]

BLAST of CmaCh00G001530 vs. ExPASy TrEMBL
Match: A0A5A7TWX1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001820 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 8.3e-62
Identity = 128/204 (62.75%), Postives = 158/204 (77.45%), Query Frame = 0


Query: 27  VALEQLSIRRVVTWESKQRKLHKWIGFLRFVLIEECPPNTSSNANRTVRDAYDKWIKEND 86
           +A E+L+     TW+S    +   +  LRFVL EECP   +SNANRT R+AYD+WIK N+
Sbjct: 9   LASEKLNRDNYTTWKSNLNTI-LVVDDLRFVLTEECPQTPASNANRTSREAYDRWIKANE 68

Query: 87  KARVYILASISDVLAKKHDVMSTAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTS 146
           KARVYILAS+SDVLAKKH+ ++TAKEIM+SLKGMFGQP +SLRH+AIKYIY  RMKEGTS
Sbjct: 69  KARVYILASMSDVLAKKHESLATAKEIMDSLKGMFGQPKWSLRHKAIKYIYTKRMKEGTS 128

Query: 147 VRELVLDMMVHFNVAEENEVVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLN 206
           +RE VL MM+HFN+AE N   IDE +QVSFI+ SLPKSF  F+TNV +NKIE+NLT LLN
Sbjct: 129 IREHVLYMMIHFNIAEVNGGAIDEANQVSFILESLPKSFIPFQTNVSLNKIEFNLTTLLN 188

Query: 207 ELQTYQSLLTNKRQTGEANVVISK 231
           ELQ +Q+L   K +  EAN+  +K
Sbjct: 189 ELQRFQNLTMGKAKEMEANIATTK 211

[Close]

BLAST of CmaCh00G001530 vs. ExPASy TrEMBL
Match: A0A5D3BBF3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00820 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 5.4e-61
Identity = 126/204 (61.76%), Postives = 158/204 (77.45%), Query Frame = 0


Query: 27  VALEQLSIRRVVTWESKQRKLHKWIGFLRFVLIEECPPNTSSNANRTVRDAYDKWIKEND 86
           +A E+L+     TW+S    +   +  LRFVL EECP   +SNANRT R+AYD+WIK N+
Sbjct: 9   LASEKLNRDNYTTWKSNLNTI-LVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANE 68

Query: 87  KARVYILASISDVLAKKHDVMSTAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTS 146
           KARVYIL+S+SDVLAKKH+ ++TAKEIM+SLKGMFGQP +SLRH+AIKYIY  +MKEGTS
Sbjct: 69  KARVYILSSMSDVLAKKHESLATAKEIMDSLKGMFGQPKWSLRHKAIKYIYTKQMKEGTS 128

Query: 147 VRELVLDMMVHFNVAEENEVVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLN 206
           +RE VL MM+HFN+AE N   IDE +QVSFI+ SLPKSF  FRTNV +NKI++NLT LLN
Sbjct: 129 IREHVLYMMIHFNIAEVNGGAIDEANQVSFILESLPKSFIPFRTNVSLNKIKFNLTTLLN 188

Query: 207 ELQTYQSLLTNKRQTGEANVVISK 231
           ELQ +Q+L   K +  EAN+  +K
Sbjct: 189 ELQRFQNLTMGKAKEVEANIATTK 211

[Close]

BLAST of CmaCh00G001530 vs. ExPASy TrEMBL
Match: A0A5A7TTD5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00620 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.6e-60
Identity = 124/205 (60.49%), Postives = 157/205 (76.59%), Query Frame = 0


Query: 27  VALEQLSIRRVVTWESKQRKLHKWIGFLRFVLIEECPPNTSSNANRTVRDAYDKWIKEND 86
           +A E+ +     TW+S    +   +  LRF+L EECP  ++SN NRT R+AYD+WIK N+
Sbjct: 9   LASEKQNSDNYATWKSNLNTILVVVD-LRFILTEECPQTSASNINRTSREAYDRWIKANE 68

Query: 87  KARVYILASISDVLAKKHDVMSTAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTS 146
           KARVYILAS+SDVLAKKH+ ++T KEIM SLKG+FGQP +SLRHEAIKYIY  RMKEGTS
Sbjct: 69  KARVYILASMSDVLAKKHESLATTKEIMNSLKGIFGQPKWSLRHEAIKYIYTKRMKEGTS 128

Query: 147 VRELVLDMMVHFNVAEENEVVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLN 206
           VRE VLDMM+HFN+A+ N  VIDE +Q+SFI+ SLPKSF  F+TN  +NKIE+NLT L+N
Sbjct: 129 VREYVLDMMMHFNIAKVNGGVIDEANQISFILESLPKSFITFQTNASLNKIEFNLTTLIN 188

Query: 207 ELQTYQSLLTNKRQTGEANVVISKK 232
           ELQ +Q+L   K +  EANV  +K+
Sbjct: 189 ELQRFQNLTKGKGKEVEANVATTKR 212

[Close]

BLAST of CmaCh00G001530 vs. ExPASy TrEMBL
Match: E2GK51 (Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 2.7e-60
Identity = 127/205 (61.95%), Postives = 159/205 (77.56%), Query Frame = 0


Query: 27  VALEQLSIRRVVTWESKQRKLHKWIGFLRFVLIEECPPNTSSNANRTVRDAYDKWIKEND 86
           +A E+L+      W+S    +   +  LRFVL EECP   + NANRTVR+AYD+W+K ND
Sbjct: 9   LASEKLNGDNYSAWKSNLNTI-LVVDDLRFVLTEECPQAPALNANRTVREAYDRWVKAND 68

Query: 87  KARVYILASISDVLAKKHDVMSTAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTS 146
           KARVYILAS++DVLAKKHD ++TAK IM+SL+ MFGQPS+SLRHEAIK+IY  RMKEGTS
Sbjct: 69  KARVYILASMTDVLAKKHDSIATAKGIMDSLREMFGQPSWSLRHEAIKHIYTKRMKEGTS 128

Query: 147 VRELVLDMMVHFNVAEENEVVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLN 206
           VRE VLDMM+HFN+AE N   IDE +QVSFI+ SLPKSF  F+TN  +NKIE+NLT LLN
Sbjct: 129 VREHVLDMMMHFNIAEVNGGPIDEANQVSFILQSLPKSFVPFQTNASLNKIEFNLTTLLN 188

Query: 207 ELQTYQSLLTNKRQTGEANVVISKK 232
           ELQ +Q+L  +K +  EANV ++K+
Sbjct: 189 ELQRFQNLTLSKGKEVEANVAVTKR 212

[Close]

BLAST of CmaCh00G001530 vs. NCBI nr
Match: XP_022158568.1 (uncharacterized protein LOC111025021 [Momordica charantia])

HSP 1 Score: 250.0 bits (637), Expect = 2.0e-62
Identity = 122/178 (68.54%), Postives = 150/178 (84.27%), Query Frame = 0


Query: 54  LRFVLIEECPPNTSSNANRTVRDAYDKWIKENDKARVYILASISDVLAKKHDVMSTAKEI 113
           LRFVL EECPP  + NANRTVRDAYD+W+K N+KARVYILASIS+VL+KKH+ ++T +EI
Sbjct: 41  LRFVLTEECPPAPAPNANRTVRDAYDRWVKANEKARVYILASISEVLSKKHERLATTREI 100

Query: 114 MESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVRELVLDMMVHFNVAEENEVVIDEKSQ 173
           M+SL+ +FGQPS +L H+A+KY+YNCRMKEG+SVRE VL+MMVHFNVAE N+ V++E SQ
Sbjct: 101 MDSLQALFGQPSTTLMHDAVKYVYNCRMKEGSSVREHVLNMMVHFNVAEVNDTVMNEISQ 160

Query: 174 VSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKRQTGEANVVISKK 232
           V FIM SLPKS+FQF+ N +MNKIEY+LT LLNELQ Y+SLL NK    EANV  + K
Sbjct: 161 VGFIMQSLPKSYFQFKINAMMNKIEYSLTTLLNELQLYESLLKNKGFEAEANVATTSK 218

[Close]

BLAST of CmaCh00G001530 vs. NCBI nr
Match: KAA0048103.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 246.9 bits (629), Expect = 1.7e-61
Identity = 128/204 (62.75%), Postives = 158/204 (77.45%), Query Frame = 0


Query: 27  VALEQLSIRRVVTWESKQRKLHKWIGFLRFVLIEECPPNTSSNANRTVRDAYDKWIKEND 86
           +A E+L+     TW+S    +   +  LRFVL EECP   +SNANRT R+AYD+WIK N+
Sbjct: 9   LASEKLNRDNYTTWKSNLNTI-LVVDDLRFVLTEECPQTPASNANRTSREAYDRWIKANE 68

Query: 87  KARVYILASISDVLAKKHDVMSTAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTS 146
           KARVYILAS+SDVLAKKH+ ++TAKEIM+SLKGMFGQP +SLRH+AIKYIY  RMKEGTS
Sbjct: 69  KARVYILASMSDVLAKKHESLATAKEIMDSLKGMFGQPKWSLRHKAIKYIYTKRMKEGTS 128

Query: 147 VRELVLDMMVHFNVAEENEVVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLN 206
           +RE VL MM+HFN+AE N   IDE +QVSFI+ SLPKSF  F+TNV +NKIE+NLT LLN
Sbjct: 129 IREHVLYMMIHFNIAEVNGGAIDEANQVSFILESLPKSFIPFQTNVSLNKIEFNLTTLLN 188

Query: 207 ELQTYQSLLTNKRQTGEANVVISK 231
           ELQ +Q+L   K +  EAN+  +K
Sbjct: 189 ELQRFQNLTMGKAKEMEANIATTK 211

[Close]

BLAST of CmaCh00G001530 vs. NCBI nr
Match: TYJ96447.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 244.2 bits (622), Expect = 1.1e-60
Identity = 126/204 (61.76%), Postives = 158/204 (77.45%), Query Frame = 0


Query: 27  VALEQLSIRRVVTWESKQRKLHKWIGFLRFVLIEECPPNTSSNANRTVRDAYDKWIKEND 86
           +A E+L+     TW+S    +   +  LRFVL EECP   +SNANRT R+AYD+WIK N+
Sbjct: 9   LASEKLNRDNYTTWKSNLNTI-LVVDDLRFVLTEECPQTLASNANRTSREAYDRWIKANE 68

Query: 87  KARVYILASISDVLAKKHDVMSTAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTS 146
           KARVYIL+S+SDVLAKKH+ ++TAKEIM+SLKGMFGQP +SLRH+AIKYIY  +MKEGTS
Sbjct: 69  KARVYILSSMSDVLAKKHESLATAKEIMDSLKGMFGQPKWSLRHKAIKYIYTKQMKEGTS 128

Query: 147 VRELVLDMMVHFNVAEENEVVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLN 206
           +RE VL MM+HFN+AE N   IDE +QVSFI+ SLPKSF  FRTNV +NKI++NLT LLN
Sbjct: 129 IREHVLYMMIHFNIAEVNGGAIDEANQVSFILESLPKSFIPFRTNVSLNKIKFNLTTLLN 188

Query: 207 ELQTYQSLLTNKRQTGEANVVISK 231
           ELQ +Q+L   K +  EAN+  +K
Sbjct: 189 ELQRFQNLTMGKAKEVEANIATTK 211

[Close]

BLAST of CmaCh00G001530 vs. NCBI nr
Match: XP_038885834.1 (uncharacterized protein LOC120076130 [Benincasa hispida])

HSP 1 Score: 243.4 bits (620), Expect = 1.9e-60
Identity = 123/182 (67.58%), Postives = 145/182 (79.67%), Query Frame = 0


Query: 27  VALEQLSIRRVVTWESKQRKLHKWIGFLRFVLIEECPPNTSSNANRTVRDAYDKWIKEND 86
           +A ++L      TW++    +   I  L+F+L EECPP  SSNANRTVRDAY++WI+ ND
Sbjct: 9   LAFDKLIGNNYATWKTNLNTI-LVIDDLQFILTEECPPIPSSNANRTVRDAYNRWIRVND 68

Query: 87  KARVYILASISDVLAKKHDVMSTAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTS 146
           K   YILA+ISDVLAKKH+ M T K+IME L+GMFGQPSFSLRH++IKYIYNC MKEG S
Sbjct: 69  KVHAYILANISDVLAKKHESMGTTKKIMEFLRGMFGQPSFSLRHDSIKYIYNCSMKEGAS 128

Query: 147 VRELVLDMMVHFNVAEENEVVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLN 206
           VRE VL+MMVHFNVAE NEVV+DEKSQ+ FI+ SLPKSF QF TN +MNKIEYNLT LLN
Sbjct: 129 VREHVLNMMVHFNVAEVNEVVVDEKSQIGFILESLPKSFLQFCTNALMNKIEYNLTTLLN 188

Query: 207 EL 209
           EL
Sbjct: 189 EL 189

[Close]

BLAST of CmaCh00G001530 vs. NCBI nr
Match: KAA0046128.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 242.7 bits (618), Expect = 3.2e-60
Identity = 124/205 (60.49%), Postives = 157/205 (76.59%), Query Frame = 0


Query: 27  VALEQLSIRRVVTWESKQRKLHKWIGFLRFVLIEECPPNTSSNANRTVRDAYDKWIKEND 86
           +A E+ +     TW+S    +   +  LRF+L EECP  ++SN NRT R+AYD+WIK N+
Sbjct: 9   LASEKQNSDNYATWKSNLNTILVVVD-LRFILTEECPQTSASNINRTSREAYDRWIKANE 68

Query: 87  KARVYILASISDVLAKKHDVMSTAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTS 146
           KARVYILAS+SDVLAKKH+ ++T KEIM SLKG+FGQP +SLRHEAIKYIY  RMKEGTS
Sbjct: 69  KARVYILASMSDVLAKKHESLATTKEIMNSLKGIFGQPKWSLRHEAIKYIYTKRMKEGTS 128

Query: 147 VRELVLDMMVHFNVAEENEVVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLN 206
           VRE VLDMM+HFN+A+ N  VIDE +Q+SFI+ SLPKSF  F+TN  +NKIE+NLT L+N
Sbjct: 129 VREYVLDMMMHFNIAKVNGGVIDEANQISFILESLPKSFITFQTNASLNKIEFNLTTLIN 188

Query: 207 ELQTYQSLLTNKRQTGEANVVISKK 232
           ELQ +Q+L   K +  EANV  +K+
Sbjct: 189 ELQRFQNLTKGKGKEVEANVATTKR 212

The following BLAST results are available for this feature:

BLAST of CmaCh00G001530 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh00G001530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWG6	9.8e-63	68.54	uncharacterized protein LOC111025021 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A5A7TWX1	8.3e-62	62.75	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G0018...	[more]
A0A5D3BBF3	5.4e-61	61.76	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G0082...	[more]
A0A5A7TTD5	1.6e-60	60.49	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G0062...	[more]
E2GK51	2.7e-60	61.95	Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1	[more]

BLAST of CmaCh00G001530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158568.1	2.0e-62	68.54	uncharacterized protein LOC111025021 [Momordica charantia]	[more]
KAA0048103.1	1.7e-61	62.75	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYJ96447.1	1.1e-60	61.76	gag/pol protein [Cucumis melo var. makuwa]	[more]
XP_038885834.1	1.9e-60	67.58	uncharacterized protein LOC120076130 [Benincasa hispida]	[more]
KAA0046128.1	3.2e-60	60.49	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of CmaCh00G001530 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 81..211 e-value: 1.0E-16 score: 60.9
None	No IPR available	PANTHER	PTHR35317:SF8	POLYPROTEIN-LIKE PROTEIN	coord: 57..226
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 57..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G001530.1	CmaCh00G001530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding