CmaCh00G001190 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh00G001190
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionrho GDP-dissociation inhibitor 1-like
LocationCma_Chr00: 5330292 .. 5331985 (-)
RNA-Seq ExpressionCmaCh00G001190
SyntenyCmaCh00G001190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTCACACCCATTTCCCTCTTATTTTCCTTTTCATCCTTCTCCCACTTCTCTCTCTCTCTCTCTCTCTCTCACACACACACAACTTTCTTCTTCTCTCTTCCCCAGGTATTTCACTCTTTAGGGTTTTCTGTCTCTTCTTCACCAATATTGGTGGGTGTGACTCTTCCTTCTCTGTACCATTAGGCGTGGTACCATTTCCCCTCTGTTCATGGCCTGTTGATGTCTCTGGCCCTTCAAATCGCTTCCACTTCAAAACGGACAATGGGGTTCGACGACAACGACAATGACGCCAAACAAGACGATTCGACCAAACTTTCAGACCCCAAAAAAGCTGGGGATGAAACACCCGGCGTTGATGCGTCTTCTGGGCTGACTCGTAAAATGAGTGAGACCTCAATCTGTGCCACTGAAGAGGACGACGACGAAGAGGGAAGGAAAATCGAGTTGGGTCCTCAGTACACTTTGAAAGAACTCAACGAGAAGGACAAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCCTCCTTTTACTTTCTTCGATTTCTTCTCCTTACCTTTTTAATCTCTCACTCTCAGGATGATGAAAGCCTCAGAAGATGGAAGGAACAGCTTCTGGGTGATGTCGATTTTGAAGCTGTTGGAGGTAATCCCACCACTACAACAGAACACAACAGAATAGAATGGGATACTCTTGTTTTTTTGTTTTTTTGTTTTTGTTACGTTTTGTTTATAAGAACCTTGTGCATTTGAGTTTTGGTTGTGTATTAGAAACTCTTGAGCCGGATGTGAAGATTGTAAGCCTTGCAATTAAGTCAGCAGAGCGGCCTGACATTGTTCTTCCAGTTCCTGAAAGTGGAAACCCCAAAGGCCTCTGGTTTACTTTGAAGGAAGGCAGTCGTTATAGCCTCTTGTTTACATTTCAGGTCAGCAATAACATTGTATCTGGTCTCAAATACACCAATACCGTGTGGAAAACTGGCGTCAAAGGTAAACACAAAAACAAAAACAAAGCAGAACAATCTCTGTTTCTCTCTCTGCCATTAACGGATTTCTTCTTCTTTTTGAATGTCACAGTTGACAGTACAAAAGAGATGATCGGAACCTTTAGCCCTCAGCCTGAACCTTATTATCATGAGATGCAGGAAGAAACGACTCCATCAGGCATCTTTGCGAGGGGATCCTATTCAGCCAGAAGCAGGGTGAGTTGGTTGATGCAAAGAAAATGCTCTGTTTTGCTCTGTTTTGCTCTGTTTTGCACATCATGGGTGCTTGTTTGTTTGTTTATTTGTTTGTTTGAGCTCAGTTCGTCGATGATGATAACAAGTGCTATTTGGAGATCAATTACACATTTGATATCAGGAAAGACTGGAAGGAGGAACAGCCTGCTTAATCATATCCTCGAGCTCCATCATTCGATCATTCGGTGCCCGATTTGCCCCGAACCCGCTGCTGCTCCATCGTTAATTTTGCTTCTGTTCTTATTTATTCTTAATCTTCTCAAAGTTGGTGTTTATTTTTCTTTTGTTTCCTTTATTTTTTTGAGAATGAGGATGAAGGATGTGTTTGAACTAACAATAGAAAAAGAAAAACAGAGATGGGTTCGATCTGTATTGTCAATAAAAAAAGCTCAGCTTTGGTTTTTCCTTAAATGTTCAACTCGATCCTTTTTCCCCACTCTTATACTTCCT

mRNA sequence

CTCTCACACCCATTTCCCTCTTATTTTCCTTTTCATCCTTCTCCCACTTCTCTCTCTCTCTCTCTCTCTCTCACACACACACAACTTTCTTCTTCTCTCTTCCCCAGGTATTTCACTCTTTAGGGTTTTCTGTCTCTTCTTCACCAATATTGGTGGGTGTGACTCTTCCTTCTCTGTACCATTAGGCGTGGTACCATTTCCCCTCTGTTCATGGCCTGTTGATGTCTCTGGCCCTTCAAATCGCTTCCACTTCAAAACGGACAATGGGGTTCGACGACAACGACAATGACGCCAAACAAGACGATTCGACCAAACTTTCAGACCCCAAAAAAGCTGGGGATGAAACACCCGGCGTTGATGCGTCTTCTGGGCTGACTCGTAAAATGAGTGAGACCTCAATCTGTGCCACTGAAGAGGACGACGACGAAGAGGGAAGGAAAATCGAGTTGGGTCCTCAGTACACTTTGAAAGAACTCAACGAGAAGGACAAGGATGATGAAAGCCTCAGAAGATGGAAGGAACAGCTTCTGGGTGATGTCGATTTTGAAGCTGTTGGAGAAACTCTTGAGCCGGATGTGAAGATTGTAAGCCTTGCAATTAAGTCAGCAGAGCGGCCTGACATTGTTCTTCCAGTTCCTGAAAGTGGAAACCCCAAAGGCCTCTGGTTTACTTTGAAGGAAGGCAGTCGTTATAGCCTCTTGTTTACATTTCAGGTCAGCAATAACATTGTATCTGGTCTCAAATACACCAATACCGTGTGGAAAACTGGCGTCAAAGTTGACAGTACAAAAGAGATGATCGGAACCTTTAGCCCTCAGCCTGAACCTTATTATCATGAGATGCAGGAAGAAACGACTCCATCAGGCATCTTTGCGAGGGGATCCTATTCAGCCAGAAGCAGGTTCGTCGATGATGATAACAAGTGCTATTTGGAGATCAATTACACATTTGATATCAGGAAAGACTGGAAGGAGGAACAGCCTGCTTAATCATATCCTCGAGCTCCATCATTCGATCATTCGGTGCCCGATTTGCCCCGAACCCGCTGCTGCTCCATCGTTAATTTTGCTTCTGTTCTTATTTATTCTTAATCTTCTCAAAGTTGGTGTTTATTTTTCTTTTGTTTCCTTTATTTTTTTGAGAATGAGGATGAAGGATGTGTTTGAACTAACAATAGAAAAAGAAAAACAGAGATGGGTTCGATCTGTATTGTCAATAAAAAAAGCTCAGCTTTGGTTTTTCCTTAAATGTTCAACTCGATCCTTTTTCCCCACTCTTATACTTCCT

Coding sequence (CDS)

ATGTCTCTGGCCCTTCAAATCGCTTCCACTTCAAAACGGACAATGGGGTTCGACGACAACGACAATGACGCCAAACAAGACGATTCGACCAAACTTTCAGACCCCAAAAAAGCTGGGGATGAAACACCCGGCGTTGATGCGTCTTCTGGGCTGACTCGTAAAATGAGTGAGACCTCAATCTGTGCCACTGAAGAGGACGACGACGAAGAGGGAAGGAAAATCGAGTTGGGTCCTCAGTACACTTTGAAAGAACTCAACGAGAAGGACAAGGATGATGAAAGCCTCAGAAGATGGAAGGAACAGCTTCTGGGTGATGTCGATTTTGAAGCTGTTGGAGAAACTCTTGAGCCGGATGTGAAGATTGTAAGCCTTGCAATTAAGTCAGCAGAGCGGCCTGACATTGTTCTTCCAGTTCCTGAAAGTGGAAACCCCAAAGGCCTCTGGTTTACTTTGAAGGAAGGCAGTCGTTATAGCCTCTTGTTTACATTTCAGGTCAGCAATAACATTGTATCTGGTCTCAAATACACCAATACCGTGTGGAAAACTGGCGTCAAAGTTGACAGTACAAAAGAGATGATCGGAACCTTTAGCCCTCAGCCTGAACCTTATTATCATGAGATGCAGGAAGAAACGACTCCATCAGGCATCTTTGCGAGGGGATCCTATTCAGCCAGAAGCAGGTTCGTCGATGATGATAACAAGTGCTATTTGGAGATCAATTACACATTTGATATCAGGAAAGACTGGAAGGAGGAACAGCCTGCTTAA

Protein sequence

MSLALQIASTSKRTMGFDDNDNDAKQDDSTKLSDPKKAGDETPGVDASSGLTRKMSETSICATEEDDDEEGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFEAVGETLEPDVKIVSLAIKSAERPDIVLPVPESGNPKGLWFTLKEGSRYSLLFTFQVSNNIVSGLKYTNTVWKTGVKVDSTKEMIGTFSPQPEPYYHEMQEETTPSGIFARGSYSARSRFVDDDNKCYLEINYTFDIRKDWKEEQPA
Homology
[Close]
BLAST of CmaCh00G001190 vs. ExPASy Swiss-Prot
Match: Q9SFC6 (Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=GDI1 PE=1 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 1.8e-86
Identity = 161/237 (67.93%), Postives = 194/237 (81.86%), Query Frame = 0 

Query: 13  RTMGFDDNDNDAKQDDSTKLSDPKKAGDETPGVDASSGLTRKMSETSICATEEDDDEEGR 72
           R MGFDDN+N+    D     D + +   T   D    L+R+MSE+S+CATEE++D++  
Sbjct: 8   RDMGFDDNNNNKNNKD----GDDENSSSRTRADD--DALSRQMSESSLCATEEEEDDDS- 67

Query: 73  KIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFEAVGETLEPDVKIVSLAIKSAERP 132
           K++LGPQYT+KE  EKDKDDESLR+WKEQLLG VD   +GETL+P+V+I SLAI S  RP
Sbjct: 68  KLQLGPQYTIKEHLEKDKDDESLRKWKEQLLGSVDVTNIGETLDPEVRIDSLAIISPGRP 127

Query: 133 DIVLPVPESGNPKGLWFTLKEGSRYSLLFTFQVSNNIVSGLKYTNTVWKTGVKVDSTKEM 192
           DIVL VPE+GNPKG+WFTLKEGS+Y+L FTF V+NNIVSGL+YTNTVWKTGVKVD  KEM
Sbjct: 128 DIVLLVPENGNPKGMWFTLKEGSKYNLKFTFHVNNNIVSGLRYTNTVWKTGVKVDRAKEM 187

Query: 193 IGTFSPQPEPYYHEMQEETTPSGIFARGSYSARSRFVDDDNKCYLEINYTFDIRKDW 250
           +GTFSPQ EPY H M EETTPSG+FARGSYSAR++F+DDDNKCYLEINY+FDIRK+W
Sbjct: 188 LGTFSPQLEPYNHVMPEETTPSGMFARGSYSARTKFLDDDNKCYLEINYSFDIRKEW 237

[Close]
BLAST of CmaCh00G001190 vs. ExPASy Swiss-Prot
Match: Q9TU03 (Rho GDP-dissociation inhibitor 2 OS=Bos taurus OX=9913 GN=ARHGDIB PE=2 SV=3)

HSP 1 Score: 130.6 bits (327), Expect = 2.6e-29
Identity = 82/205 (40.00%), Postives = 113/205 (55.12%), Query Frame = 0 

Query: 51  LTRKMSETSICATEEDDDEEGRKIEL--GPQYTLKELNEKDKDDESLRRWKEQLLGDVDF 110
           +T K  E  +   EEDDDE   K+     PQ +LKEL E DKDDESL ++K+ LLG  D 
Sbjct: 1   MTEKAPEPHV---EEDDDELDGKLNYKPPPQKSLKELQEMDKDDESLTKYKKTLLG--DG 60

Query: 111 EAVGETLEPDVKI--VSLAIKSAERPDIVLPVPESGNPKGLWFTLKEGSRYSLLFTFQVS 170
             V +   P+V +  ++L  +SA  P  +    +    K   F LKEG  Y +   F+V+
Sbjct: 61  PVVADPTAPNVTVTRLTLVCESAPGPITMDLTGDLEALKKETFVLKEGVEYRVKINFKVN 120

Query: 171 NNIVSGLKYTNTVWKTGVKVDSTKEMIGTFSPQPEPYYHEMQEETTPSGIFARGSYSARS 230
            +IVSGLKY    ++TGVKVD    M+G++ P+PE Y      E  P G+ ARG+Y  +S
Sbjct: 121 KDIVSGLKYVQHTYRTGVKVDKATFMVGSYGPRPEEYEFLTPIEEAPKGMLARGTYHNKS 180

Query: 231 RFVDDDNKCYLEINYTFDIRKDWKE 252
            F DDD   +L   +   I+KDW E
Sbjct: 181 FFTDDDKHDHLTWEWNLSIKKDWTE 200

[Close]
BLAST of CmaCh00G001190 vs. ExPASy Swiss-Prot
Match: P52565 (Rho GDP-dissociation inhibitor 1 OS=Homo sapiens OX=9606 GN=ARHGDIA PE=1 SV=3)

HSP 1 Score: 127.5 bits (319), Expect = 2.2e-28
Identity = 73/190 (38.42%), Postives = 105/190 (55.26%), Query Frame = 0 

Query: 62  ATEEDDDEEGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFEAVGETLEPDVKI 121
           A E ++DE     +   Q +++E+ E DKDDESLR++KE LLG V   A        V  
Sbjct: 15  AAENEEDEHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSADPNVPNVVVTG 74

Query: 122 VSLAIKSAERPDIVLPVPESGNPKGLWFTLKEGSRYSLLFTFQVSNNIVSGLKYTNTVWK 181
           ++L   SA  P  +    +  + K   F LKEG  Y +  +F+V+  IVSG+KY    ++
Sbjct: 75  LTLVCSSAPGPLELDLTGDLESFKKQSFVLKEGVEYRIKISFRVNREIVSGMKYIQHTYR 134

Query: 182 TGVKVDSTKEMIGTFSPQPEPYYHEMQEETTPSGIFARGSYSARSRFVDDDNKCYLEINY 241
            GVK+D T  M+G++ P+ E Y      E  P G+ ARGSYS +SRF DDD   +L   +
Sbjct: 135 KGVKIDKTDYMVGSYGPRAEEYEFLTPVEEAPKGMLARGSYSIKSRFTDDDKTDHLSWEW 194

Query: 242 TFDIRKDWKE 252
              I+KDWK+
Sbjct: 195 NLTIKKDWKD 204

[Close]
BLAST of CmaCh00G001190 vs. ExPASy Swiss-Prot
Match: Q4R4J0 (Rho GDP-dissociation inhibitor 1 OS=Macaca fascicularis OX=9541 GN=ARHGDIA PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.2e-28
Identity = 73/190 (38.42%), Postives = 105/190 (55.26%), Query Frame = 0 

Query: 62  ATEEDDDEEGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFEAVGETLEPDVKI 121
           A E ++DE     +   Q +++E+ E DKDDESLR++KE LLG V   A        V  
Sbjct: 15  AAENEEDEHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSADPNVPNVVVTG 74

Query: 122 VSLAIKSAERPDIVLPVPESGNPKGLWFTLKEGSRYSLLFTFQVSNNIVSGLKYTNTVWK 181
           ++L   SA  P  +    +  + K   F LKEG  Y +  +F+V+  IVSG+KY    ++
Sbjct: 75  LTLVCSSAPGPLELDLTGDLESFKKQSFVLKEGVEYRIKISFRVNREIVSGMKYIQHTYR 134

Query: 182 TGVKVDSTKEMIGTFSPQPEPYYHEMQEETTPSGIFARGSYSARSRFVDDDNKCYLEINY 241
            GVK+D T  M+G++ P+ E Y      E  P G+ ARGSYS +SRF DDD   +L   +
Sbjct: 135 KGVKIDKTDYMVGSYGPRAEEYEFLTPVEEAPKGMLARGSYSIKSRFTDDDKTDHLSWEW 194

Query: 242 TFDIRKDWKE 252
              I+KDWK+
Sbjct: 195 NLTIKKDWKD 204

[Close]
BLAST of CmaCh00G001190 vs. ExPASy Swiss-Prot
Match: P52566 (Rho GDP-dissociation inhibitor 2 OS=Homo sapiens OX=9606 GN=ARHGDIB PE=1 SV=3)

HSP 1 Score: 126.7 bits (317), Expect = 3.7e-28
Identity = 80/205 (39.02%), Postives = 114/205 (55.61%), Query Frame = 0 

Query: 51  LTRKMSETSICATEEDDDEEGRKIEL--GPQYTLKELNEKDKDDESLRRWKEQLLGDVDF 110
           +T K  E  +   E+DDDE   K+     PQ +LKEL E DKDDESL ++K+ LLG  D 
Sbjct: 1   MTEKAPEPHV--EEDDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLG--DG 60

Query: 111 EAVGETLEPDVKI--VSLAIKSAERPDIVLPVPESGNPKGLWFTLKEGSRYSLLFTFQVS 170
             V +   P+V +  ++L  +SA  P  +    +    K     LKEGS Y +   F+V+
Sbjct: 61  PVVTDPKAPNVVVTRLTLVCESAPGPITMDLTGDLEALKKETIVLKEGSEYRVKIHFKVN 120

Query: 171 NNIVSGLKYTNTVWKTGVKVDSTKEMIGTFSPQPEPYYHEMQEETTPSGIFARGSYSARS 230
            +IVSGLKY    ++TGVKVD    M+G++ P+PE Y      E  P G+ ARG+Y  +S
Sbjct: 121 RDIVSGLKYVQHTYRTGVKVDKATFMVGSYGPRPEEYEFLTPVEEAPKGMLARGTYHNKS 180

Query: 231 RFVDDDNKCYLEINYTFDIRKDWKE 252
            F DDD + +L   +   I+K+W E
Sbjct: 181 FFTDDDKQDHLSWEWNLSIKKEWTE 201

[Close]
BLAST of CmaCh00G001190 vs. TAIR 10
Match: AT3G07880.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 320.5 bits (820), Expect = 1.2e-87
Identity = 161/237 (67.93%), Postives = 194/237 (81.86%), Query Frame = 0 

Query: 13  RTMGFDDNDNDAKQDDSTKLSDPKKAGDETPGVDASSGLTRKMSETSICATEEDDDEEGR 72
           R MGFDDN+N+    D     D + +   T   D    L+R+MSE+S+CATEE++D++  
Sbjct: 8   RDMGFDDNNNNKNNKD----GDDENSSSRTRADD--DALSRQMSESSLCATEEEEDDDS- 67

Query: 73  KIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFEAVGETLEPDVKIVSLAIKSAERP 132
           K++LGPQYT+KE  EKDKDDESLR+WKEQLLG VD   +GETL+P+V+I SLAI S  RP
Sbjct: 68  KLQLGPQYTIKEHLEKDKDDESLRKWKEQLLGSVDVTNIGETLDPEVRIDSLAIISPGRP 127

Query: 133 DIVLPVPESGNPKGLWFTLKEGSRYSLLFTFQVSNNIVSGLKYTNTVWKTGVKVDSTKEM 192
           DIVL VPE+GNPKG+WFTLKEGS+Y+L FTF V+NNIVSGL+YTNTVWKTGVKVD  KEM
Sbjct: 128 DIVLLVPENGNPKGMWFTLKEGSKYNLKFTFHVNNNIVSGLRYTNTVWKTGVKVDRAKEM 187

Query: 193 IGTFSPQPEPYYHEMQEETTPSGIFARGSYSARSRFVDDDNKCYLEINYTFDIRKDW 250
           +GTFSPQ EPY H M EETTPSG+FARGSYSAR++F+DDDNKCYLEINY+FDIRK+W
Sbjct: 188 LGTFSPQLEPYNHVMPEETTPSGMFARGSYSARTKFLDDDNKCYLEINYSFDIRKEW 237

[Close]
BLAST of CmaCh00G001190 vs. TAIR 10
Match: AT1G62450.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 292.4 bits (747), Expect = 3.6e-79
Identity = 143/221 (64.71%), Postives = 175/221 (79.19%), Query Frame = 0 

Query: 32  LSDPKKAGDETPGVDASSGLTRKMSETSICATEEDDDEEGRKIELGPQYTLKELNEKDKD 91
           L D  K G+ +       GL+RK S +S+  TE+D+++E +K+ELGP   LKE  E+DKD
Sbjct: 3   LEDEMKKGEASGETSEKMGLSRKNSGSSLSPTEDDEEDEDKKLELGPMIALKEQLERDKD 62

Query: 92  DESLRRWKEQLLGDVDFEAVGETLEPDVKIVSLAIKSAERPDIVLPVPESG--NPKGLWF 151
           DESLRRWKEQLLG VD E VGET +P VKI+ L I+S +R ++VL +PE G  NPKG WF
Sbjct: 63  DESLRRWKEQLLGVVDLEDVGETPDPVVKILDLTIRSPDREEMVLTIPEDGLPNPKGPWF 122

Query: 152 TLKEGSRYSLLFTFQVSNNIVSGLKYTNTVWKTGVKVDSTKEMIGTFSPQPEPYYHEMQE 211
           T+KEGS+Y+L+F F+V+NNIVSGL+Y NTVWKTGVKVDSTK M+GTFSPQ E Y H M E
Sbjct: 123 TIKEGSKYTLVFNFRVTNNIVSGLRYNNTVWKTGVKVDSTKAMLGTFSPQAESYQHVMPE 182

Query: 212 ETTPSGIFARGSYSARSRFVDDDNKCYLEINYTFDIRKDWK 251
           E TPSG+FARGSYSAR++F+DDDNKCYLEINYTFDIRK W+
Sbjct: 183 EMTPSGMFARGSYSARTKFIDDDNKCYLEINYTFDIRKSWQ 223

[Close]
BLAST of CmaCh00G001190 vs. TAIR 10
Match: AT1G12070.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 288.9 bits (738), Expect = 4.0e-78
Identity = 141/220 (64.09%), Postives = 175/220 (79.55%), Query Frame = 0 

Query: 32  LSDPKKAGDETPGVDASSGLTRKMSETSICATEEDDDEEGRKIELGPQYTLKELNEKDKD 91
           L+D +    E+       GL+RK S +S+C T++D++EE +K+ELGP   LKE  EKDKD
Sbjct: 3   LNDEEMKAGESSEEPKGQGLSRKNSHSSMCPTDDDEEEEDKKLELGPMIALKEQLEKDKD 62

Query: 92  DESLRRWKEQLLGDVDFEAVGETLEPDVKIVSLAIKSAERPDIVLPVPESGNP--KGLWF 151
           DESLRRWKEQLLG VD E VGET +P VKI++L I+S +R D+VL +PE+G P  KG WF
Sbjct: 63  DESLRRWKEQLLGSVDLEEVGETPDPLVKILTLTIRSPDREDMVLTIPENGKPASKGPWF 122

Query: 152 TLKEGSRYSLLFTFQVSNNIVSGLKYTNTVWKTGVKVDSTKEMIGTFSPQPEPYYHEMQE 211
           TLKEGS+Y+L+FTF+V+NNIVSGL+Y+NTVWKTG+KV S KEM+GTFSPQ EPY H M E
Sbjct: 123 TLKEGSKYTLIFTFRVTNNIVSGLQYSNTVWKTGIKVYSRKEMLGTFSPQAEPYTHVMFE 182

Query: 212 ETTPSGIFARGSYSARSRFVDDDNKCYLEINYTFDIRKDW 250
           ET PSG+  RGSYS +S+FVDDDN+CYLE NYTFDIRK+W
Sbjct: 183 ETAPSGLLVRGSYSVKSKFVDDDNQCYLENNYTFDIRKNW 222

The following BLAST results are available for this feature:
BLAST of CmaCh00G001190 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SFC61.8e-8667.93Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=GDI1 PE=1 SV... [more]
Q9TU032.6e-2940.00Rho GDP-dissociation inhibitor 2 OS=Bos taurus OX=9913 GN=ARHGDIB PE=2 SV=3[more]
P525652.2e-2838.42Rho GDP-dissociation inhibitor 1 OS=Homo sapiens OX=9606 GN=ARHGDIA PE=1 SV=3[more]
Q4R4J02.2e-2838.42Rho GDP-dissociation inhibitor 1 OS=Macaca fascicularis OX=9541 GN=ARHGDIA PE=2 ... [more]
P525663.7e-2839.02Rho GDP-dissociation inhibitor 2 OS=Homo sapiens OX=9606 GN=ARHGDIB PE=1 SV=3[more]
BLAST of CmaCh00G001190 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G07880.11.2e-8767.93Immunoglobulin E-set superfamily protein [more]
AT1G62450.13.6e-7964.71Immunoglobulin E-set superfamily protein [more]
AT1G12070.14.0e-7864.09Immunoglobulin E-set superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000406Rho protein GDP-dissociation inhibitorPRINTSPR00492RHOGDIcoord: 228..245
score: 32.41
coord: 169..185
score: 50.98
coord: 186..201
score: 38.54
IPR000406Rho protein GDP-dissociation inhibitorPFAMPF02115Rho_GDIcoord: 63..248
e-value: 1.4E-81
score: 272.9
IPR000406Rho protein GDP-dissociation inhibitorPANTHERPTHR10980RHO GDP-DISSOCIATION INHIBITORcoord: 22..250
IPR024792Rho GDP-dissociation inhibitor domain superfamilyGENE3D2.70.50.30Coagulation Factor XIII, subunit A, domain 1coord: 72..251
e-value: 1.4E-69
score: 235.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availablePANTHERPTHR10980:SF50RHO GDP-DISSOCIATION INHIBITOR 1coord: 22..250
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 61..250

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh00G001190.1CmaCh00G001190.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050790 regulation of catalytic activity
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005094 Rho GDP-dissociation inhibitor activity