CmaCh00G000790 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh00G000790
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	NADH dehydrogenase subunit 9
Location	Cma_Chr00: 4267879 .. 4268389 (+)
RNA-Seq Expression	CmaCh00G000790
Synteny	CmaCh00G000790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATAGATCGGATACCAATACGGACTACCTATTTCAATTGTTGTGCTTTCTCAAATTGCATACCTATACAAGGGTTCAAGTTTCGATCGATATTTGCGGAGTTGATTATCCCTCTCAAAAACGCAGATTTTCAGTGGTCTATATAATTTACTGAGTACTCGGTATAACTCACGCATTCGTGTACAAACCTGTGCAAATGAAGTAACACGAATATCTCCGGTAATCAGTCTATTTCCATCAGCCGGCCGGTGGGAGCGAGAAGTTTGGGATATGTTTGGTGTTTCTTCGATCAATCATCCGGATCTACGCCGTATATCAACAGATTATGGTTTCGAAGGGCATCCATTACGAAAAGACCTTCCTCTGAGTGGATATGTGGAAGTACGCTATGATGATCCAGAGAAACGTGTGGTTACTAAACCCATTGAGATGACCCAGAATTTCGCTATTTCGATTTTGCTAGTCCTTGGGAACAGCGTAGCGACGGATAATTTAGAATCAGAATAG

mRNA sequence

ATGGGAATAGATCGGATACCAATACGGACTACCTATTTCAATTGTTGTGCTTTCTCAAATTGCATACCTATACAAGGGTTCAAGTTTCGATCGATATTTGCGGATGGTCTATATAATTTACTGAGTACTCGGTATAACTCACGCATTCGTGTACAAACCTGTGCAAATGAAGTAACACGAATATCTCCGGTAATCAGTCTATTTCCATCAGCCGGCCGGTGGGAGCGAGAAGTTTGGGATATGTTTGGTGTTTCTTCGATCAATCATCCGGATCTACGCCGTATATCAACAGATTATGGTTTCGAAGGGCATCCATTACGAAAAGACCTTCCTCTGAGTGGATATGTGGAAGTACGCTATGATGATCCAGAGAAACGTGTGGTTACTAAACCCATTGAGATGACCCAGAATTTCGCTATTTCGATTTTGCTAGTCCTTGGGAACAGCGTAGCGACGGATAATTTAGAATCAGAATAG

Coding sequence (CDS)

ATGGGAATAGATCGGATACCAATACGGACTACCTATTTCAATTGTTGTGCTTTCTCAAATTGCATACCTATACAAGGGTTCAAGTTTCGATCGATATTTGCGGATGGTCTATATAATTTACTGAGTACTCGGTATAACTCACGCATTCGTGTACAAACCTGTGCAAATGAAGTAACACGAATATCTCCGGTAATCAGTCTATTTCCATCAGCCGGCCGGTGGGAGCGAGAAGTTTGGGATATGTTTGGTGTTTCTTCGATCAATCATCCGGATCTACGCCGTATATCAACAGATTATGGTTTCGAAGGGCATCCATTACGAAAAGACCTTCCTCTGAGTGGATATGTGGAAGTACGCTATGATGATCCAGAGAAACGTGTGGTTACTAAACCCATTGAGATGACCCAGAATTTCGCTATTTCGATTTTGCTAGTCCTTGGGAACAGCGTAGCGACGGATAATTTAGAATCAGAATAG

Protein sequence

MGIDRIPIRTTYFNCCAFSNCIPIQGFKFRSIFADGLYNLLSTRYNSRIRVQTCANEVTRISPVISLFPSAGRWEREVWDMFGVSSINHPDLRRISTDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVTKPIEMTQNFAISILLVLGNSVATDNLESE

Homology

[Close]

BLAST of CmaCh00G000790 vs. ExPASy Swiss-Prot
Match: Q37787 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Beta vulgaris OX=161934 GN=NAD9 PE=2 SV=3)

HSP 1 Score: 193.4 bits (490), Expect = 2.0e-48
Identity = 90/102 (88.24%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 37  LYNLLSTRYNSRIRVQTCANEVTRISPVISLFPSAGRWEREVWDMFGVSSINHPDLRRIS 96
           +YNLLSTRYNSRIR+QTCA+EVTRIS V+SLFPSAG WEREVWDMFGVS INHPDLRRI 
Sbjct: 74  VYNLLSTRYNSRIRLQTCADEVTRISLVVSLFPSAGWWEREVWDMFGVSFINHPDLRRIL 133

Query: 97  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVTKPIEMTQNF 139
           TDYGFEGHPLRKD PLSGYVEVRYDDPEKRVV++PIEMTQ F
Sbjct: 134 TDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEF 175

[Close]

BLAST of CmaCh00G000790 vs. ExPASy Swiss-Prot
Match: Q35322 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=NAD9 PE=2 SV=2)

HSP 1 Score: 191.4 bits (485), Expect = 7.6e-48
Identity = 90/102 (88.24%), Postives = 95/102 (93.14%), Query Frame = 0


Query: 37  LYNLLSTRYNSRIRVQTCANEVTRISPVISLFPSAGRWEREVWDMFGVSSINHPDLRRIS 96
           +YNLLSTRYNSRIRVQT A+EVTRIS V+SLFPSAG WEREVWDMFGVS INHPDLRRI 
Sbjct: 74  VYNLLSTRYNSRIRVQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVSFINHPDLRRIL 133

Query: 97  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVTKPIEMTQNF 139
           TDYGFEGHPLRKD PLSGYVEVRYDDPEKRVV++PIEMTQ F
Sbjct: 134 TDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEF 175

[Close]

BLAST of CmaCh00G000790 vs. ExPASy Swiss-Prot
Match: Q95748 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Arabidopsis thaliana OX=3702 GN=NAD9 PE=1 SV=2)

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-47
Identity = 89/102 (87.25%), Postives = 95/102 (93.14%), Query Frame = 0


Query: 37  LYNLLSTRYNSRIRVQTCANEVTRISPVISLFPSAGRWEREVWDMFGVSSINHPDLRRIS 96
           +YNLLSTRYNSRIRVQT A+EVTRIS V+SLFPSAG WEREVWDMFGVS INHPDLRRI 
Sbjct: 74  VYNLLSTRYNSRIRVQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVSFINHPDLRRIL 133

Query: 97  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVTKPIEMTQNF 139
           TDYGFEGHPLRKD PLSGYV+VRYDDPEKRVV++PIEMTQ F
Sbjct: 134 TDYGFEGHPLRKDFPLSGYVQVRYDDPEKRVVSEPIEMTQEF 175

[Close]

BLAST of CmaCh00G000790 vs. ExPASy Swiss-Prot
Match: Q33994 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Beta trigyna OX=19769 GN=NAD9 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-47
Identity = 89/102 (87.25%), Postives = 95/102 (93.14%), Query Frame = 0


Query: 37  LYNLLSTRYNSRIRVQTCANEVTRISPVISLFPSAGRWEREVWDMFGVSSINHPDLRRIS 96
           +YNLLSTRYNSRIR+QT A+EVTRIS V+SLFPSAG WEREVWDMFGVS INHPDLRRI 
Sbjct: 74  VYNLLSTRYNSRIRLQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVSFINHPDLRRIL 133

Query: 97  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVTKPIEMTQNF 139
           TDYGFEGHPLRKD PLSGYVEVRYDDPEKRVV++PIEMTQ F
Sbjct: 134 TDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEF 175

[Close]

BLAST of CmaCh00G000790 vs. ExPASy Swiss-Prot
Match: P80261 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Solanum tuberosum OX=4113 GN=NAD9 PE=1 SV=3)

HSP 1 Score: 189.1 bits (479), Expect = 3.8e-47
Identity = 89/102 (87.25%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 37  LYNLLSTRYNSRIRVQTCANEVTRISPVISLFPSAGRWEREVWDMFGVSSINHPDLRRIS 96
           +YNLLS RYNSRIRVQT A+EVTRIS V+SLFPSAG WEREVWDMFGV SINHPDLRRI 
Sbjct: 74  VYNLLSIRYNSRIRVQTSADEVTRISSVVSLFPSAGWWEREVWDMFGVFSINHPDLRRIL 133

Query: 97  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVTKPIEMTQNF 139
           TDYGFEGHPLRKD PLSGYVEVRYDDPEKRVV++PIEMTQ F
Sbjct: 134 TDYGFEGHPLRKDFPLSGYVEVRYDDPEKRVVSEPIEMTQEF 175

[Close]

BLAST of CmaCh00G000790 vs. ExPASy TrEMBL
Match: A0A6N2MXL1 (Complex1_30kDa domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS379137 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 7.1e-57
Identity = 111/122 (90.98%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 37  LYNLLSTRYNSRIRVQTCANEVTRISPVISLFPSAGRWEREVWDMFGVSSINHPDLRRIS 96
           +YNLLSTRYNSRIRVQT A+EVTRI PV+SLFPSAGRWEREVWDMFGVS INHPDLRRI 
Sbjct: 53  VYNLLSTRYNSRIRVQTSADEVTRIFPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRIL 112

Query: 97  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVTKPIEMTQNFAISILLVLGNSVATDNLE 156
           TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV++PIEMT+NFAISILLVLGNSVATDN E
Sbjct: 113 TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTKNFAISILLVLGNSVATDNSE 172

Query: 157 SE 159
           SE
Sbjct: 173 SE 174

[Close]

BLAST of CmaCh00G000790 vs. ExPASy TrEMBL
Match: A0A3S5HWW4 (NADH dehydrogenase subunit 9 OS=Acacia ligulata OX=138025 GN=nad9 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.8e-50
Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 37  LYNLLSTRYNSRIRVQTCANEVTRISPVISLFPSAGRWEREVWDMFGVSSINHPDLRRIS 96
           +YNLLSTRYNSRIRVQTCA+EVTRISPV+SLFPSAGRWEREVWDMFGVSSINHPDLRRIS
Sbjct: 74  VYNLLSTRYNSRIRVQTCADEVTRISPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRIS 133

Query: 97  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVTKPIEMTQNF 139
           TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV++PIEMTQ F
Sbjct: 134 TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEF 175

[Close]

BLAST of CmaCh00G000790 vs. ExPASy TrEMBL
Match: A0A386JNG2 (NADH dehydrogenase subunit 9 OS=Glycine soja OX=3848 GN=nad9 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.8e-50
Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 37  LYNLLSTRYNSRIRVQTCANEVTRISPVISLFPSAGRWEREVWDMFGVSSINHPDLRRIS 96
           +YNLLSTRYNSRIRVQTCA+EVTRISPV+SLFPSAGRWEREVWDMFGVSSINHPDLRRIS
Sbjct: 74  VYNLLSTRYNSRIRVQTCADEVTRISPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRIS 133

Query: 97  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVTKPIEMTQNF 139
           TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV++PIEMTQ F
Sbjct: 134 TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEF 175

[Close]

BLAST of CmaCh00G000790 vs. ExPASy TrEMBL
Match: A0A4D6FRG7 (NADH dehydrogenase subunit 9 OS=Actinidia chinensis OX=3625 GN=nad9 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.8e-50
Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 37  LYNLLSTRYNSRIRVQTCANEVTRISPVISLFPSAGRWEREVWDMFGVSSINHPDLRRIS 96
           +YNLLSTRYNSRIRVQTCA+EVTRISPV+SLFPSAGRWEREVWDMFGVSSINHPDLRRIS
Sbjct: 74  VYNLLSTRYNSRIRVQTCADEVTRISPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRIS 133

Query: 97  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVTKPIEMTQNF 139
           TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV++PIEMTQ F
Sbjct: 134 TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEF 175

[Close]

BLAST of CmaCh00G000790 vs. ExPASy TrEMBL
Match: I1LNM2 (NADH dehydrogenase subunit 9 OS=Glycine max OX=3847 GN=nad9 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.8e-50
Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 37  LYNLLSTRYNSRIRVQTCANEVTRISPVISLFPSAGRWEREVWDMFGVSSINHPDLRRIS 96
           +YNLLSTRYNSRIRVQTCA+EVTRISPV+SLFPSAGRWEREVWDMFGVSSINHPDLRRIS
Sbjct: 74  VYNLLSTRYNSRIRVQTCADEVTRISPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRIS 133

Query: 97  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVTKPIEMTQNF 139
           TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV++PIEMTQ F
Sbjct: 134 TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEF 175

[Close]

BLAST of CmaCh00G000790 vs. NCBI nr
Match: QCB20448.1 (NADH dehydrogenase subunit 9 [Actinidia chinensis] >QCD14080.1 NADH dehydrogenase subunit 9 [Actinidia arguta] >QCD14107.1 NADH dehydrogenase subunit 9 [Actinidia eriantha])

HSP 1 Score: 207.6 bits (527), Expect = 7.8e-50
Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 37  LYNLLSTRYNSRIRVQTCANEVTRISPVISLFPSAGRWEREVWDMFGVSSINHPDLRRIS 96
           +YNLLSTRYNSRIRVQTCA+EVTRISPV+SLFPSAGRWEREVWDMFGVSSINHPDLRRIS
Sbjct: 74  VYNLLSTRYNSRIRVQTCADEVTRISPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRIS 133

Query: 97  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVTKPIEMTQNF 139
           TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV++PIEMTQ F
Sbjct: 134 TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEF 175

[Close]

BLAST of CmaCh00G000790 vs. NCBI nr
Match: YP_009531170.1 (NADH dehydrogenase subunit 9 [Leucaena trichandra] >YP_009559980.1 NADH dehydrogenase subunit 9 [Acacia ligulata] >AXY63884.1 NADH dehydrogenase subunit 9 [Leucaena trichandra] >AZZ06857.1 NADH dehydrogenase subunit 9 [Acacia ligulata])

HSP 1 Score: 207.6 bits (527), Expect = 7.8e-50
Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 37  LYNLLSTRYNSRIRVQTCANEVTRISPVISLFPSAGRWEREVWDMFGVSSINHPDLRRIS 96
           +YNLLSTRYNSRIRVQTCA+EVTRISPV+SLFPSAGRWEREVWDMFGVSSINHPDLRRIS
Sbjct: 74  VYNLLSTRYNSRIRVQTCADEVTRISPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRIS 133

Query: 97  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVTKPIEMTQNF 139
           TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV++PIEMTQ F
Sbjct: 134 TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEF 175

[Close]

BLAST of CmaCh00G000790 vs. NCBI nr
Match: KAG4943576.1 (hypothetical protein JHK85_048222 [Glycine max])

HSP 1 Score: 207.6 bits (527), Expect = 7.8e-50
Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 37  LYNLLSTRYNSRIRVQTCANEVTRISPVISLFPSAGRWEREVWDMFGVSSINHPDLRRIS 96
           +YNLLSTRYNSRIRVQTCA+EVTRISPV+SLFPSAGRWEREVWDMFGVSSINHPDLRRIS
Sbjct: 53  VYNLLSTRYNSRIRVQTCADEVTRISPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRIS 112

Query: 97  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVTKPIEMTQNF 139
           TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV++PIEMTQ F
Sbjct: 113 TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEF 154

[Close]

BLAST of CmaCh00G000790 vs. NCBI nr
Match: QWX88084.1 (NADH dehydrogenase subunit 9 [Arachis hypogaea])

HSP 1 Score: 207.6 bits (527), Expect = 7.8e-50
Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 37  LYNLLSTRYNSRIRVQTCANEVTRISPVISLFPSAGRWEREVWDMFGVSSINHPDLRRIS 96
           +YNLLSTRYNSRIRVQTCA+EVTRISPV+SLFPSAGRWEREVWDMFGVSSINHPDLRRIS
Sbjct: 74  VYNLLSTRYNSRIRVQTCADEVTRISPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRIS 133

Query: 97  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVTKPIEMTQNF 139
           TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV++PIEMTQ F
Sbjct: 134 TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEF 175

[Close]

BLAST of CmaCh00G000790 vs. NCBI nr
Match: YP_009940652.1 (NADH dehydrogenase subunit 9 [Passiflora edulis] >QNZ92478.1 NADH dehydrogenase subunit 9 [Passiflora edulis])

HSP 1 Score: 207.6 bits (527), Expect = 7.8e-50
Identity = 96/102 (94.12%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 37  LYNLLSTRYNSRIRVQTCANEVTRISPVISLFPSAGRWEREVWDMFGVSSINHPDLRRIS 96
           +YNLLSTRYNSRIRVQTCA+EVTRISPV+SLFPSAGRWEREVWDMFGVSSINHPDLRRIS
Sbjct: 74  VYNLLSTRYNSRIRVQTCADEVTRISPVVSLFPSAGRWEREVWDMFGVSSINHPDLRRIS 133

Query: 97  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVTKPIEMTQNF 139
           TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVV++PIEMTQ F
Sbjct: 134 TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVSEPIEMTQEF 175

[Close]

BLAST of CmaCh00G000790 vs. TAIR 10
Match: ATMG00070.1 (NADH dehydrogenase subunit 9 )

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-51
Identity = 93/102 (91.18%), Postives = 99/102 (97.06%), Query Frame = 0


Query: 37  LYNLLSTRYNSRIRVQTCANEVTRISPVISLFPSAGRWEREVWDMFGVSSINHPDLRRIS 96
           +YNLLSTRYNSRIRVQT A+EVTRISPV+SLFPSAGRWEREVWDMFGVS INHPDLRRIS
Sbjct: 74  VYNLLSTRYNSRIRVQTSADEVTRISPVVSLFPSAGRWEREVWDMFGVSFINHPDLRRIS 133

Query: 97  TDYGFEGHPLRKDLPLSGYVEVRYDDPEKRVVTKPIEMTQNF 139
           TDYGFEGHPLRKDLPLSGYV+VRYDDPEKRVV++PIEMTQ F
Sbjct: 134 TDYGFEGHPLRKDLPLSGYVQVRYDDPEKRVVSEPIEMTQEF 175

[Close]

BLAST of CmaCh00G000790 vs. TAIR 10
Match: ATCG00420.1 (NADH dehydrogenase subunit J )

HSP 1 Score: 46.2 bits (108), Expect = 2.8e-05
Identity = 27/88 (30.68%), Postives = 41/88 (46.59%), Query Frame = 0


Query: 37  LYNLLSTRYNSRIRVQTCANEVT-----RISPVISLFPSAGRWEREVWDMFGVSSINHPD 96
           +Y+L    Y      + C    T     RI  V  ++ S    ERE +DM G++  +HP 
Sbjct: 68  VYHLTRIEYGVNQAEEVCIKVFTHRSNPRIPSVFWVWKSTDFQERESYDMLGITYDSHPR 127

Query: 97  LRRISTDYGFEGHPLRKDLPLSGYVEVR 120
           L+RI     + G PLRKD     + E++
Sbjct: 128 LKRILMPESWIGWPLRKDYIAPNFYEIQ 155

The following BLAST results are available for this feature:

BLAST of CmaCh00G000790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q37787	2.0e-48	88.24	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Beta vulgaris OX=161934...	[more]
Q35322	7.6e-48	88.24	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Oryza sativa subsp. jap...	[more]
Q95748	1.7e-47	87.25	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Arabidopsis thaliana OX...	[more]
Q33994	1.7e-47	87.25	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Beta trigyna OX=19769 G...	[more]
P80261	3.8e-47	87.25	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 OS=Solanum tuberosum OX=41...	[more]

BLAST of CmaCh00G000790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6N2MXL1	7.1e-57	90.98	Complex1_30kDa domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOC...	[more]
A0A3S5HWW4	3.8e-50	94.12	NADH dehydrogenase subunit 9 OS=Acacia ligulata OX=138025 GN=nad9 PE=3 SV=1	[more]
A0A386JNG2	3.8e-50	94.12	NADH dehydrogenase subunit 9 OS=Glycine soja OX=3848 GN=nad9 PE=3 SV=1	[more]
A0A4D6FRG7	3.8e-50	94.12	NADH dehydrogenase subunit 9 OS=Actinidia chinensis OX=3625 GN=nad9 PE=3 SV=1	[more]
I1LNM2	3.8e-50	94.12	NADH dehydrogenase subunit 9 OS=Glycine max OX=3847 GN=nad9 PE=3 SV=1	[more]

BLAST of CmaCh00G000790 vs. NCBI nr


Match Name	E-value	Identity	Description
QCB20448.1	7.8e-50	94.12	NADH dehydrogenase subunit 9 [Actinidia chinensis] >QCD14080.1 NADH dehydrogenas...	[more]
YP_009531170.1	7.8e-50	94.12	NADH dehydrogenase subunit 9 [Leucaena trichandra] >YP_009559980.1 NADH dehydrog...	[more]
KAG4943576.1	7.8e-50	94.12	hypothetical protein JHK85_048222 [Glycine max]	[more]
QWX88084.1	7.8e-50	94.12	NADH dehydrogenase subunit 9 [Arachis hypogaea]	[more]
YP_009940652.1	7.8e-50	94.12	NADH dehydrogenase subunit 9 [Passiflora edulis] >QNZ92478.1 NADH dehydrogenase ...	[more]

BLAST of CmaCh00G000790 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00070.1	1.2e-51	91.18	NADH dehydrogenase subunit 9	[more]
ATCG00420.1	2.8e-05	30.68	NADH dehydrogenase subunit J	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001268	NADH:ubiquinone oxidoreductase, 30kDa subunit	PFAM	PF00329	Complex1_30kDa	coord: 37..115 e-value: 1.0E-24 score: 87.4
IPR037232	NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily	GENE3D	3.30.460.80	NADH:ubiquinone oxidoreductase, 30kDa subunit	coord: 13..94 e-value: 8.5E-15 score: 57.3
IPR037232	NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily	SUPERFAMILY	143243	Nqo5-like	coord: 37..138
None	No IPR available	PANTHER	PTHR10884	NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 3	coord: 37..138
IPR020396	NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site	PROSITE	PS00542	COMPLEX1_30K	coord: 75..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G000790.1	CmaCh00G000790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H