CmaCh00G000610 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh00G000610
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionPhotosystem II protein D1
LocationCma_Chr00: 3138766 .. 3148121 (-)
RNA-Seq ExpressionCmaCh00G000610
SyntenyCmaCh00G000610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATTCAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAAGTTACATCTATCAATGGATAAGACTGATTTCTGTCTTAGGGTATACAAGTTCTTTCAAGTAAAGGAGCAATAACCAATTTCTTGTTTTCTCAAGAGGATGAAAAGATTGATTTTTCTTGTTCTCGGGCTATGGGCATTTGACTGCCCAAGGTAATTGAGGGAAATTAGATAGAGTCGTTTTGATCAGCGACGAATAGGCTTTGAGGCCTTTCGTTAGCTCACTAATAAAGATTCTTTCTGATCGATCTTGTAGATATATTCCGTCTACGCGTAAAACTGAGAGGCAAGACCGATTCTTATAAACAGTTTCAGGTCTATTCTCCGTTAGGCTTTGAAAGGTCTGAATTTGCATATTCAGAAAGAAACTAGCTCTGGAATGTAGGGCTCTTCAGTTGGATCATTAGGAGCGGGTTGCTACTTTCTTCCTACTAGCTCTGGTCTCTTTTTCCTCTGCTTCGAGTTCTAATTCGAGTTCTAAGGGGAAGCGAACGGTCGGGGTTGCTAGGCTTGCCGAAGCTGCGAACTAGGCCGGCCGATAGGCAAAGTTGGTCTTTGGGTTAGGGTGTTGAAAGCAAAAGACAAGGTTTTAGATACTGGCCTTCCTATGGTTGAGTGGGATTCCTACAAAGGGAAGATGATGTCTTATTCGTTCAAGTGCCTGGTGAAAGCACTTTCCTAGTTGAAGGACGGGTTGCAGTGGGGGATGGAGCTTCTGCCAATTTTTGGACGGATCGCTGGCTTGATGTGCCGATAGTGGATATGCTTGATAATTTGCCTCAATATTTGGATCTTACAACAAAAATACAAGAGTTGATTCTTGAACCAGGTGTGTGGAATTCGGCAAAGCTTAAGGAGTATGTGCCCACTGACGTTGTTGCAAAAGTTGTTGGGTACCCTTTATTTAGCGGGGTTTGTGAGTACAAAAGACAGCGTCTTCTGGAGACATACATCCTCGAGGATCTTTACTTCAAGGTCAGCTTATAGAGCCTTGCAAGATGGTGATGCTGGACAAAGCTCGGATGACTTCTCTTGGGTATGGAAATTGAAGATTCCAAATGGAGCTATTTTATTTGGCTTGCATTGAGGGATAGATTACCAACTAATAGTCTTAGACACTGTTGGGGAATGGATGGAAATGGTGCATGCAAGCAGTGTCCGAGAGAGATGGAAACTGTAATACATGTGCTAAGAGACTGCCGTGTATCAAGGGATATCTGGAACTCATTGAGGTCAGATTTACAGGACACTTCTTTCTTTTCTCTTCCTCTTAGGGAGTGGCTGAAAGAAAATGCATATGAGTCTAAAGATGGCTACTGGAAAACTTTGTTTGTTGTAACGTGCTGGCGTATTTGGACAAGAAGGTGTCGTGTGGTCTTCAATGAGGACGTGGATGAAGAGAAAGACGTGGGACTTCTCAGAAATATCAGACTGACTACTATGGAGGTGGTAAGTGCTTTATCAGGTACACAGCCTGCTATGGCGGACGATAGGCTGATAAGTTGGCAGCCACCGAATGGAAGCGCAGTCAGGCTTAACTTAACACGGACGGAGCTTCACATGGAAATCCTGGAATCTCAGGAGCTGGTGGCCTTATTCGAGCTGCAGATGGGAAATGGGTGATGGGTTTTCAAGCTTGCCTGGGGTTTTGTTCAAATAATGTGGCTGAGATGCAAGCTTTACGATTGGGATTGTTATTGGCATGGGGCTTGGGCTTTAGAGATGTCCAATGTAGTGTTGACTCCAAGGTGGTAGTAGATTTGATTGCTGATGCTGATACACGGTTTAATCCTCATGGGAATCTCATTGAAGATGTTCGTGCTATTATGAGAAGGTAATGGTCCTGTACCCTGCATCACACTCTCCGAGAAGGAAATTTCTGCGCTGATTTTCTTGCGCTGTTACATTGGGTCAGAATGAAAGGTTCTCCATTCCCCACCGGCGGAAATACTCTCTTGATGGCTGATGCTCAAGTGCCTTCCCAAGAGGCTTTCAACTGTAATCGTTTTTGCTTTCCTTTGATCAGAACTACTATCTATCACCACTGAGTAAGGAATCGAAGTTACGGGTATAAGCGGAAGGCGAAGTCAGGTTATAGCTACGCAGCGAAGAAAAGGAGGTGATCAGTACCCGTAGCGTAGTGACGAAGAAGATGATCATTTATTTAGTAGGCGAACAGTCGAAGAACCACTCTAACGAAGAATGGAGCTGCTTCGTAAGGAATAGGAATCAGGCTTTGGTTTCACGAATTAATGCCAGTTTCTTTATCGGTCAGAGATGAATCTAAATCAATTTCGTATTCGTAAGAGTTCGTAAGAGAAAGAGCGAAGTAGGAAAGATCAAAAGATTCAGAGTAGACTCCTTCTTCGGGCCTATATATAATAGGATGAGTTTAGCAATCCTTCGTCGAGCCTTCCTGCAGGTTTAAAGCTCCTGTTCGCCTACTATCAATTACACATTCGTATCTGCTGAGAAATAGAATAGGCTTTTTTAGCTCCTTTCTCAGTCACCTGATTTGGCACCAGCCAAAGGAGTACTGTTCATATTTCGACTAGTGACGGGGGTGTGATCAAGTCAAAGACTTAGCGCTAAAGCACCTTCGCTCCTATCCTTTAAGTCGACTCCAGTGGACTCTGAGCTTATAAGTCGGTTCGTATAAAAGCCTGTCAGAGAATTGTCAAAAGTCGGATTTTCCCAGAAGTTGCCGATCGAGGATAATGCAACGAGGTGTTTTCTAATGTAATGATCATTCCAAGATTTCCACTGTTTAAATAGAAGTACAATCTACTAAAAGAGTCAGAACACTAGTGAACTAGTCTTGAGGATTGGGACTTGGCTCCTTCGTAAAGAAGAACAAGCGAAACGATACCTAGATCCGGCTGGGAAACAACAATGTTGCTTAGGTTACATTGGAAATAAGTACTGAATGAAACCATTTTCTTCTATTTTCCACTAAGTCAGCTTGCCCCATGAGACAATGGACGCTTTTCATTCCTTCCTCTTTTTCTTGCTTAGTTGGCTACTCTCATCCCTGAATTCAAGTGTGTTGGCCTAGGTTCTTGGCTGCACAACCTCACATGCTCTATGGACTTCCCTGGAAGAGGGTGTTTGCTTCTATCTAAGTCAAGAGCAAGAATAATGCAACTTCGCCTTCTATTAGAGACCAAAAAGAAAGAAAGGCTCTATCTCAATGACGGATTATCTCCAAAAAGAAAAAGCATCGCGAATAATCTATCTGCAATCTTCGTGAACGGACTTCTCAGAATAATGGTCGTAGATGTGGTCGTGGACGTGGTAACTCTGTTCTTGGCCACCTCCCTCCTTTCTTTCTATGCTCCGCAAGGCTTTGATCAAGACCTTTGCTTGCTCCAGTGTAGTGTAAGCTATGTTTTCAATTCTTTCATACTGCTCGCGAATGTCAACAGCATAAGAAGCAAGCCTTTTATACAGATCAGTTCTCTCTCCCAAGGTCAATCTCTTTTTGAAGTTTGAAGGTGGAGTTTCCATTCCGAAGTTTACGTATACGGATCAACTGCTCCCGGCTCGAAGAAGTTCATGCTTGATCTGAACGCCCTTACAAGGTAGTTGGGTTGGAGGATGAAAGCCGCTTTTTTCTGGCATGACTACAGAAGAGAGGTAATTCTCTAAAAAAGGACAGAAAGGAATGACTATCTATAAAGAGAGAGGCTTGCACAGACATCCCGAGGGTAAAGAAAGAGATTAGACAGACCGTCCCTTTGAACTCAAACAAAGATCAGACGACGATTAGCCGAGAATCTCAATCGAAAGTAAGACCTTCTTCCAATAGCTCTCTCTTTCTCTTTCAGTCACAGAAAGCACATCTAAAGAGAAGAAAAAGAAAGTAAGATGAATCTAGTATAGTCAGACTCTTTTTCGTTTTCTTTTGCCGGTATCCTAAGATCTCTTGACTAAGTCATTTCACACTAAGCACTGAGAACAAGGGATTGATCCCATACCGTGCTACTGCCTTGACCTAGGATTAGGATTTCATTTTCTTTCTACGTTTTTTCACATCTGCTTCCGCGGAATCTTTTTCAAGATCTGTTTTTTGGTTTGATAAAACTGAGTCACGATTCTTTTCGTCCACAACTTCCTTTTTTCCTTTATTTCCATTTTCGAATTCAAGAGGTTTTTTCTTCGCTGATATTAAAGGAGATCCTTTTTTCTTTCCAATTCGTTTTTCATTTTCTCGACTGTAAAGGACAGGTGAATGAGCAAAGCAAGCAGTGAGACCAATAGAATAGGTGAAGGAGCGAAGACGCTCGAACATCCTTGAATTTTCTTTGACCTTGTGTTGGAATAAATAGGGAGAGGACAGAAGGAGAATGAATCTTGAGTCTTGACTTGCAAATTACCTAAAAAATGAAACTTGACAGTTATAGGGAGAATGAAATGAAAGATGAATGAGACTGAACAGGAAGGAAAGAATAGAAATGAAACTTGACAGTGATAGAGAATGAAAGATGAATTCTTGATCTTCTCCTTCCCCTATGGATTCTTGAACTGTAAAAGATCAATACTCATTCACCTTCTTTCACTCTTTTTCCTGTAAAGACCATGAATTCTAAAATGCTATCCTCTGTCTATTTTTTGGGATAAAATCCCTGATTTCCCGGGATTTTGGGCCATTTTGGGCCATTTTCCCGGTATTTAGGGCCATTTTCCCTGATTTCACTCTTTTTCCTGTAAAGACCATGAATTCTGAAATTCTATCCTCTGTCTATTTTTTGGGATATTTAAGAGTATAGGTAATTCACTATTAAGTCAAGACTCAACAAGAAGAAATGAATTAGCTGCTTTCCTCTCCCTTCACCTTTAATGAGCCAAAGAGAAAGAAAAGAATGAAAAGAGACCAATAGAATAGAATAGGTTAAATCACGGACAGGATTGAATATGCTTTAGTGAAATCAGTCTTTCATATGCTCAACTAGAAACGAACGCCAGGGACAGGAAAGAAAAGAGACCGAGGTTACAGTGTTTGAAAGGAGAAGAGAAAGAAAGAGAAGCGACTGAACCGATATGACCTTGCCTTATTTTATGACCTTGCCTTATTTCAGGAGGTAAAGCTAGAAGAAGAAGATATTCCTTCGGCTGAACCTTCCCCGATATTACCTGACCGGATGGATTGAAGGAGGTAAACTCGGCGAGCAGCTTCGCACCTTTCACTCTTTTTCCTGTAAAGACCATTAATTCTAAAATTCTATCCTCTGTCTATTTTTTGGGATATTTAAGAGTATAGGTAATTCACTATTAAGTCAAGACTCAACAAGAAGAAATGAATTAGCTGCTTTCCTCTCCCTTCACCTTTAATGAGCCAAAGAGAAAGAAAAGAAAGAAAAGAGACCAATAGAATAGAATAGGTTAAATCACGGACAGGATTGAATATGCTTTAGTGAAATCAGTCTTTCATATGCTCAACTAGAAACGAACGCCAGGGACAGGAAAGAAAAGAGACCGAGGTTACAGTGTTTGAAAGGAGAAGAGAAAGAAAGAGAAGCGACTGAACCGATATGACCTTGCCTTATTTTATGACCTTGCCTTATTTCAGGAGGTAAAGCTAGAAGAAGAAGATATTCCTTCGGCTGAACCTTCCCCGATATTACCTGACCGGATGGATTGAAGGAGGTAAACTCGGCGAGCAGCTTCGCACCTTTCCGATTCATTCTCCTGTAAAGACCATTAATCAAAAAACTCTATCTTCTGTCTATTTTTTGGGATATTTTAGGCCGAGGTAATTAGGAAGTCAAGACTCAACTCTCGATGAATTATCCTTCAACTTGTCCCTGATTGAACTCGGTAAAGCAACTTCTCTCTTGAACCTATTTATTCACTGTAAAGTGGCTTCGCCCCTGAACATGATGTCCCTTCCCTATTTATTCCTTCAAACACGAGGTAAAAAAGTCGCTAATTCATTGACTATCCCTTCACTGTCAAAGAAAGAAAAGATAATTGATTGAAGAAGAAAATTCAAGCAAAAGAGAAAGAAAAGAAGAAGAACCCGAAAAAGAGCTACTTCACCTTCAGCTATTTCTTCTTGAACTGTAAACAAGGATCAATACTCCTATTTATTCATTCTCCTGAACCTCGTAAACAAGGAAAGACTCAAGATTAATGAGACTGAACTCGCATATTCAATCCTTCACTCCTGAACCTATCGGTTTCACAAGCACTAAATTTAAGTCAGTTCTTCCCCTGAATCTCTACAACTCGGTTGAACAATTCCATTGCCTGCCCCGATATTACCTGACCAGATTTCAGGGTAAAGGTATTTTACGGTCTCTTTGCTTTCCTTTGATTCTGCTTTCAAGACTCTGAAAATGAAAGAAAGATTTGCTCCTGAACCTGATTTCACTCCTTCCTTCACCTTTACAGGAAACAAAAGAATAAGACTTCAAAGACTCGGTAAAGCTATTAACCTGAACCTCTATTACCTTCAGTTATGGTTCGTTATTCTCAGTTATTGTGAGTTATTATCAGTTCTAGTTCGTTATTCTTTCACAAGGTAAATAGGTGAAGTAGCTCTTTCTTTTCTTTCACTCGGTCTCGCTATTTTCCTGTCCTTTACAGTCTCACATATTCAATCCTCTCCTCTTCTCGTCTCGCAGCTTCTCTCCTCGCTTTTGTTCAATTATAAATAAATAACCATTTTGATGGAGATTTGTAGCATCATTCAAGTAAATACAGATTGAGATCGTAGAAACATGAGCTTGTGATATAGCTACACCTAATTCCAAACCGGTTAATGCAAGAACTATAAATAAAGGACCAGGATCTCCTATGAAATAGAAAATATTATTCATACATAGCATAGTCCAAGCGGACCCACTTAAAATCTTTACTGAACTACGACCGGCCATCATATTAGCAAATAACCGTATTCCTGAGCTTAATGCGCGAAAACAATGAGGGATTAGCTCAAGGAGTACTAAAAAAGGTGCTAATGGCAGTGGGACTCCAGCGGGTAATGAGAAACTTAAAAAATGAAGCCCATTTCTTTGAAATCCCACTATAGTAATACCAATAAAAAGAGAAAATGAGAGACCCAAAGTAATGAGAAAATGACTTGTAACTGTGAAGCTATAAGGTATCATACCCTGGGGATTACGAAATAACGAAAAAGTCAAAGTGACCGAGATGCGAGGGAAAAACTTTTGTTTCACATTTCCGGATCCGAAAAGACCACCTATTTGTTCGTTTACCAGGTTCGGCACGAAATCATAAATAAGCTCTACCAAGGATTGCCAAGCATTTGGTACTGAGTTTCCTCCTCCGTTTTTAGTAACAAAATAAACCAGAAGTAGGACCAAACTGAGAGTTAGCAGCATAAAGAAAGAGGGATTTGTGAATGAGAAATAAAAGTTTCCTATATTCATAGAAATCAATGGGAGAATGGCAAATTGCTCAAGTGGGCTGTTGGGCGTAATCGTAAGAAACACTTTTCATTTCATCCCTGTAGTTCCGCTTCTTGCTCTAAAAATGAAGAAAGACTTGTCGGAAATAGCCAGTTGGGTTGGTCCAACCAAGAAAGGCATGGGAGTGGGCATTGCTGAGGAGAAAATCCGACGGAAATGGCCTATTGATTGAAGCTCTACGCTGTGGAATCGTCCGCAGGTAGCGTTCAGGTTTAATCCTTTGAGTTCAAGGAGGGAGGAAGGCTTTCTAAAAGCGGCTTTTGCCATTCTCAATCGCCTTCATCGCCCTGGGGAGGAATCTGAGGTCGCCTCTCTCTCTTCTTCTCCAAGAGAAGATTGATTGCCAGCCCCACATCTGACTCTTCATCCACTGGAATGGAACGAGGATGAACGAGCTCGGCGGCCTTTTGCTTTAGCTCTTCGGCCCGAGCCTCAAAAAGGTTCATTTGCCGTTCCACCCCCCGATACTCCTTGGAAGAGATTAGTCGGCGTCCTCCCTTTCCTGTTCACTCAATTCTCTGAGGTTGAGCCCAACCGGGCGGACCTAATGATCCGCTCGTAGCCTTAGCTTATCGACGGGTCTTGCATTAGATAGATACAGCATTTTCTTTGACTCATGCGCCTTGGAGAAGAACGTTCTTTGTTTGAGTTTGAAGTCGTTACCTTACCTTGCGGGAGCCACCTGGGCGAGACCCTTCTCTCCTTTTTTTCTTATTTCCATATGGTTCATCACTTGTTCAGTCGACTGAAGACCGTGTCTGCTTCAACTTCACCCCTCGTGTCGTGTAGTGTAGCAAGACTAAGAAGAAGTGGTCAACTTCATTTATGAACAAGCAACTATTTCTTAGTAGCAATACCTTTCTCTTTTTTGATTCTTCCTCCACCACCTCCACGGGCGAATAGAGTCTAATACACTCTTTCTTGGCTAGTGTAGCAGACTCCATGAGAGGTCATTCGGAAGGGCTCCGTATAGTTCGATTTTGGGGCGTAACATTGTGGTTGGTTGTTCCCTTTCCCTCGACTGACCGAGAAAAAGAAGTGAAAGAGGCATCTTCCATTCATATCAATTTAGGTTTTTCTGCACCATATTTAGATCTTCCTCTTCTTCGATTCGGAATTCCCAGCAAATCCTTGACTCCTCGAATACAATGGGATTTCACACCTGGCGAATCTTTCACTCTACCTCCTCTTATTAAGACCATAGAATGTTCCTGCAAATTATGACCTTCGCCCGGAATGTGAGCAAATATATCATGTCGATTGCTCAACCGTACTTTGGCTATCTTACGTGGAGCTGAATTAGGTTTTTTCGGTGTTCTCGTTGAAAGACGGGGGCGTACTCCTTGCTTCTGGGGACATTGATCCGAAGCTCGAGTACGGTCCGTGCGCCGTTTTTCTTCTCTACCATGACGACGAATCAATTGATTTAATGTAG

mRNA sequence

ATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATTCAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAAGTTTTTTCGGTGTTCTCGTTGAAAGACGGGGGCGTACTCCTTGCTTCTGGGGACATTGATCCGAAGCTCGAGTACGGTCCGTGCGCCGTTTTTCTTCTCTACCATGACGACGAATCAATTGATTTAATGTAG

Coding sequence (CDS)

ATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATTCAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAAGTTTTTTCGGTGTTCTCGTTGAAAGACGGGGGCGTACTCCTTGCTTCTGGGGACATTGATCCGAAGCTCGAGTACGGTCCGTGCGCCGTTTTTCTTCTCTACCATGACGACGAATCAATTGATTTAATGTAG

Protein sequence

MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANSGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVFSVFSLKDGGVLLASGDIDPKLEYGPCAVFLLYHDDESIDLM
Homology
[Close]
BLAST of CmaCh00G000610 vs. ExPASy Swiss-Prot
Match: Q2QDA8 (Photosystem II protein D1 OS=Cucumis sativus OX=3659 GN=psbA PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 4.9e-84
Identity = 159/169 (94.08%), Postives = 160/169 (94.67%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANSGYRFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GYRFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVFSV 163
           NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEV S+
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSI 351

[Close]
BLAST of CmaCh00G000610 vs. ExPASy Swiss-Prot
Match: Q7YJY8 (Photosystem II protein D1 OS=Calycanthus floridus var. glaucus OX=212734 GN=psbA PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 8.4e-84
Identity = 158/166 (95.18%), Postives = 159/166 (95.78%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANSGYRFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN+GYRFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEV 160
           NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEV
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEV 348

[Close]
BLAST of CmaCh00G000610 vs. ExPASy Swiss-Prot
Match: A6MMA2 (Photosystem II protein D1 OS=Chloranthus spicatus OX=13006 GN=psbA PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.1e-83
Identity = 158/169 (93.49%), Postives = 160/169 (94.67%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANSGYRFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN+GYRFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVFSV 163
           NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE  S+
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSI 351

[Close]
BLAST of CmaCh00G000610 vs. ExPASy Swiss-Prot
Match: Q49L18 (Photosystem II protein D1 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=psbA PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.1e-83
Identity = 158/166 (95.18%), Postives = 158/166 (95.18%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANSGYRFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GYRFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEV 160
           NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEV
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEV 348

[Close]
BLAST of CmaCh00G000610 vs. ExPASy Swiss-Prot
Match: A6MMS4 (Photosystem II protein D1 OS=Illicium oligandrum OX=145286 GN=psbA PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.1e-83
Identity = 158/169 (93.49%), Postives = 160/169 (94.67%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANSGYRFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN+GYRFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVFSV 163
           NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE  S+
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSI 351

[Close]
BLAST of CmaCh00G000610 vs. ExPASy TrEMBL
Match: A0A6H1XH56 (Photosystem II protein D1 OS=Eleocharis dulcis OX=110284 GN=psbA PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 6.2e-82
Identity = 159/169 (94.08%), Postives = 160/169 (94.67%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANSGYRFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GYRFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVFSV 163
           NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEV S+
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVLSI 351

[Close]
BLAST of CmaCh00G000610 vs. ExPASy TrEMBL
Match: A0A0G2YIE5 (Photosystem II protein D1 OS=Geranium subcaulescens OX=1368268 GN=psbA PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 6.2e-82
Identity = 159/169 (94.08%), Postives = 160/169 (94.67%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANSGYRFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GYRFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVFSV 163
           NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEV S+
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVLSI 351

[Close]
BLAST of CmaCh00G000610 vs. ExPASy TrEMBL
Match: H6SZW3 (Photosystem II protein D1 (Fragment) OS=Ecdeiocolea monostachya OX=98869 GN=psbA PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 6.2e-82
Identity = 159/169 (94.08%), Postives = 160/169 (94.67%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANSGYRFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GYRFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVFSV 163
           NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEV S+
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVLSI 351

[Close]
BLAST of CmaCh00G000610 vs. ExPASy TrEMBL
Match: A0A6H0E5N2 (Photosystem II protein D1 OS=Intsia bijuga OX=162812 GN=psbA PE=3 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 8.2e-82
Identity = 158/169 (93.49%), Postives = 160/169 (94.67%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANSGYRFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GYRFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVFSV 163
           NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EV S+
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEVLSI 351

[Close]
BLAST of CmaCh00G000610 vs. ExPASy TrEMBL
Match: A0A343UJQ8 (Photosystem II protein D1 OS=Asarum sieboldii OX=76098 GN=psbA PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.1e-81
Identity = 160/169 (94.67%), Postives = 161/169 (95.27%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANSGYRFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN+GYRFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVFSV 163
           NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEV SV
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSV 351

[Close]
BLAST of CmaCh00G000610 vs. NCBI nr
Match: AFA27342.1 (photosystem II protein D1, partial [Ecdeiocolea monostachya])

HSP 1 Score: 313.5 bits (802), Expect = 1.3e-81
Identity = 159/169 (94.08%), Postives = 160/169 (94.67%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANSGYRFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GYRFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVFSV 163
           NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEV S+
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVLSI 351

[Close]
BLAST of CmaCh00G000610 vs. NCBI nr
Match: AKI84881.1 (photosystem II protein D1 [Geranium subcaulescens])

HSP 1 Score: 313.5 bits (802), Expect = 1.3e-81
Identity = 159/169 (94.08%), Postives = 160/169 (94.67%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANSGYRFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GYRFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVFSV 163
           NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEV S+
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVLSI 351

[Close]
BLAST of CmaCh00G000610 vs. NCBI nr
Match: YP_009774929.1 (photosystem II protein D1 [Eleocharis dulcis] >QJA14985.1 photosystem II protein D1 [Eleocharis dulcis])

HSP 1 Score: 313.5 bits (802), Expect = 1.3e-81
Identity = 159/169 (94.08%), Postives = 160/169 (94.67%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANSGYRFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GYRFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVFSV 163
           NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEV S+
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVLSI 351

[Close]
BLAST of CmaCh00G000610 vs. NCBI nr
Match: YP_009766739.1 (photosystem II protein D1 [Intsia bijuga] >QIS97274.1 photosystem II protein D1 [Intsia bijuga])

HSP 1 Score: 313.2 bits (801), Expect = 1.7e-81
Identity = 158/169 (93.49%), Postives = 160/169 (94.67%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANSGYRFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GYRFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVFSV 163
           NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EV S+
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEVLSI 351

[Close]
BLAST of CmaCh00G000610 vs. NCBI nr
Match: YP_008854491.1 (photosystem II protein D1 [Ravenala madagascariensis] >AYP33242.1 photosystem II protein D1 [Goeppertia roseopicta] >AYP34919.1 photosystem II protein D1 [Strelitzia caudata] >AYP34991.1 photosystem II protein D1 [Strelitzia reginae] >AHA12580.1 photosystem II protein D1 [Ravenala madagascariensis] >AYP34478.1 photosystem II protein D1 [Ravenala madagascariensis])

HSP 1 Score: 312.8 bits (800), Expect = 2.2e-81
Identity = 158/169 (93.49%), Postives = 161/169 (95.27%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANSGYRFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN+GYRFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV+       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVFSV 163
           NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEV S+
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVSSI 351

[Close]
BLAST of CmaCh00G000610 vs. TAIR 10
Match: ATCG00020.1 (photosystem II reaction center protein A )

HSP 1 Score: 309.3 bits (791), Expect = 2.3e-84
Identity = 157/165 (95.15%), Postives = 157/165 (95.15%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANSGYRFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GYRFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE 347

[Close]
BLAST of CmaCh00G000610 vs. TAIR 10
Match: ATCG00270.1 (photosystem II reaction center protein D )

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-13
Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = 0 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANSGYRFG-- 60
           ++ FQ  HN  ++PFHM+GVAGV G +L  A+HG+ V ++L     + + AN+   F   
Sbjct: 183 ILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFE---DGDGANTFRAFNPT 242

Query: 61  QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGISTMAFNLNGFNFNQSVV 120
           Q EETY++V A+ ++ ++     +F+N R LHFF+   PV G+   A  + G   N    
Sbjct: 243 QAEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAY 302

Query: 121 DSQGRVINTWAD 131
           D   + I    D
Sbjct: 303 DFVSQEIRAAED 309

The following BLAST results are available for this feature:
BLAST of CmaCh00G000610 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q2QDA84.9e-8494.08Photosystem II protein D1 OS=Cucumis sativus OX=3659 GN=psbA PE=3 SV=1[more]
Q7YJY88.4e-8495.18Photosystem II protein D1 OS=Calycanthus floridus var. glaucus OX=212734 GN=psbA... [more]
A6MMA21.1e-8393.49Photosystem II protein D1 OS=Chloranthus spicatus OX=13006 GN=psbA PE=3 SV=1[more]
Q49L181.1e-8395.18Photosystem II protein D1 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=psb... [more]
A6MMS41.1e-8393.49Photosystem II protein D1 OS=Illicium oligandrum OX=145286 GN=psbA PE=3 SV=1[more]
BLAST of CmaCh00G000610 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6H1XH566.2e-8294.08Photosystem II protein D1 OS=Eleocharis dulcis OX=110284 GN=psbA PE=3 SV=1[more]
A0A0G2YIE56.2e-8294.08Photosystem II protein D1 OS=Geranium subcaulescens OX=1368268 GN=psbA PE=3 SV=1[more]
H6SZW36.2e-8294.08Photosystem II protein D1 (Fragment) OS=Ecdeiocolea monostachya OX=98869 GN=psbA... [more]
A0A6H0E5N28.2e-8293.49Photosystem II protein D1 OS=Intsia bijuga OX=162812 GN=psbA PE=3 SV=1[more]
A0A343UJQ81.1e-8194.67Photosystem II protein D1 OS=Asarum sieboldii OX=76098 GN=psbA PE=3 SV=1[more]
BLAST of CmaCh00G000610 vs. NCBI nr
Match NameE-valueIdentityDescription
AFA27342.11.3e-8194.08photosystem II protein D1, partial [Ecdeiocolea monostachya][more]
AKI84881.11.3e-8194.08photosystem II protein D1 [Geranium subcaulescens][more]
YP_009774929.11.3e-8194.08photosystem II protein D1 [Eleocharis dulcis] >QJA14985.1 photosystem II protein... [more]
YP_009766739.11.7e-8193.49photosystem II protein D1 [Intsia bijuga] >QIS97274.1 photosystem II protein D1 ... [more]
YP_008854491.12.2e-8193.49photosystem II protein D1 [Ravenala madagascariensis] >AYP33242.1 photosystem II... [more]
BLAST of CmaCh00G000610 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00020.12.3e-8495.15photosystem II reaction center protein A [more]
ATCG00270.11.6e-1334.85photosystem II reaction center protein D [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036854Photosystem II protein D1/D2 superfamilyGENE3D1.20.85.10coord: 1..130
e-value: 4.4E-17
score: 64.2
IPR036854Photosystem II protein D1/D2 superfamilySUPERFAMILY81483Bacterial photosystem II reaction centre, L and M subunitscoord: 1..154
IPR000484Photosynthetic reaction centre, L/MPFAMPF00124Photo_RCcoord: 1..138
e-value: 4.2E-33
score: 114.7
IPR000484Photosynthetic reaction centre, L/MPANTHERPTHR33149PHOTOSYSTEM II PROTEIN D1coord: 1..140
IPR000484Photosynthetic reaction centre, L/MPROSITEPS00244REACTION_CENTERcoord: 9..35
NoneNo IPR availablePANTHERPTHR33149:SF30PHOTOSYNTHETIC REACTION CENTRE, L/M-RELATEDcoord: 1..140

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh00G000610.1CmaCh00G000610.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009772 photosynthetic electron transport in photosystem II
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0009635 response to herbicide
biological_process GO:0019684 photosynthesis, light reaction
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009523 photosystem II
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
molecular_function GO:0010242 oxygen evolving activity