CmaCh00G000560 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGTCCAACTACATTGCATTGCCAGAATCCATGTTGTATATTTGAAAGAGGTTGACCTCCTTGCTTCTCTCATGTTACAATCCTCTTCCCGCCGAGCCCCCTTTCTCCTCGATCCACAGAGACAAAATGGAGGACTGGTGCCAACAGTTCATCACGGAAGAAAGGACTCACTGAGCCGAGATCACTAACTAATACTAATCTAATACTAATAGAATAGAAAAGAACTGTCTTTTCTGTATACTTTCCCCGGTTCCGTTGCTACCGCGGGCTTTACGCAATCAATCGGATCATATAGATATCCCTTCAACACAACATAGGTCATCGAAAGGATCTCGGAGACCCACCAAAGCACGAAAGCCAGAATCTTTCAGAAAATGGATTCCTATTCGAAGAGTGCATAACCGCATGGATAAGCTCACACTAACCCGTCAATTTTGGATCCAATTCGGAATTTTCCTTGGGAGGTATCGGGAAGGAATTGGAATGTAATAATATCGATTCATACAGATACAGAAGAAAAGGTTCTCTATTGATTCAAACACTGTACCCGCGGGATAGGGATAGAGAAAGAGGAAAAAAACGAAGATTTCACATAGTACTTTTGATCGAAAAATCAATCTGATTTATTTCGTACCTTTCGCTCAATGAAAAAATGGGTCAGATTCTACAGGATCAAACCTATGGGACTTAAGGAATGATCGAAGGGAATAAAAAAAGAAAAAAAAAAAGAGAGGGAAAAATAAGTAAATAAAAATGACGTAGAAGAGCCCAGATTCCAAATGAATGAAAACGTGACTGAATTGGTCTCGGTCACTCTTCGGGACGGAATGGAAGAGGGGAGGAGATTCTCAAATGAGGAAAAGGATCCAATGACTTCGAAAGAATTGAACGAGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGTCGAGTGGCAGTAAGGGTGACTTATCTGTCAACTTTTCCACTATCACCCCAAAAAAACCAAACTCTGCCTAATGTAAAGTTGTCAGAGTACGCTTAACCTCGGGATTTGAAATCACTGCTTATATACCTGGTATTGGCTATAATTTACAAGAACCTTCTGTAGTCTTAGTAACAGAGGGAAGGGTTAAGGATTTACCCGGTGTGAGATATCACATTCTTTGAGGAACCCTAGATGCTATCGGAGTAAAGGATCGTCAACAAGGGGGTTCTAGTGCGTTGTAGATTCTTATCCAAGACTTGTATCATTTGATGATGCCATGTGAATCGTTGGAAACATGTGAAGTATGGCTAACCCAATAACGAATGTTTCGTAAGGGAACTGGAGCAAGCTACCATGAGAAAAACAAAAGATCTTCTTTCTAAAGAGATTCGATACGAAACTATTATATGTCCAAGGTCTAATATTGAAATAATTTCAGAGGTTTTTCTTGACTTTGACCGTGTCAACAAAGCATTCGAAATGCCTCGACTTTTTTAGAACAGGTCCGAGTCAAATAGTAGTGATTCGAAGCACCTCTTTTTACACTATTTCGAAAACTCAAGGATTCAATCGTATGGATATGTAAAATACAGGATTTCCAATCCTAGCAGGAAAGGGAGGGAAACGGATACTCAATTTAAAGTGAGTAAACAAAATTCCATACTCGATCTCATAGATACATATAGAATTTTGTAGAAAGCCGTATTCGATGAAATTCGTATGTACGGCTTGGAGGGAGATCTTTCATATCTTTCGAGATCCACCCTACAATATGGGGTCAAAAAGCCAAAATAAATGATTTTAGCCCTTATAAAAAGAAAACTGATTCTTGAACCCCTTTCACGCTCATGTCACGTCGAGGTACTGCAGAAGAAAAAATTGCAAAATCTGATCCAATTTATTGTAATCAATTAGTTAACATGTTGGTTAACCATATTCTAAAACACGGAAAAAATCATTGGCTTATCAAATTATCTATTGAGCCATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAAGACGTGGAGTAACTCCCGATATAGCAATAAAGGCAAGATGTTTAAGCGTATCAACTCATCAAGTTTCCATTGAAATAGGATCCACACAAGGGAAAGCACTTGCCATTCGTTGGTTATTAAGGGCATCCCGAAAACGTCTGAGTCGAAATATGGCTTTCAAATTAAGTTCCAAATTAGTGGATGCTGCCAAAGGGAGTGGCCATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGTGCTTTTGCACATTTTCGTTAATCCATGAACAGGATATATATAGACACATAGGCCCATGGATCCATACATCTCGATCAGAAAAGAATCAATAGAAAAAGAAAGAATCATAATTGATCGATATATTTCTCGAAACAAATGAAAAGGAAACGAAAGACGAAACATAAATCATGGATCAACTAAGCCAAGCCCTCTCGGGGACTTGGTTAAGAATAAGAAAGAAGAATCTCATGTAAATACCATGGAATAAGGTTTGATCCTATTCATGGGGATTCCGTAAATATTCCATTTCAAAAAGAGAAAGTTGGAAACAATTGGGATTTTTTTTGGAGATTGGATGCAGTTACTAATTTTGATATGGCATGTACAGAATGAAAACTTCATTCTCGATTCTACGAGAATTTTTATGAAAGCCTTTCATTTGCGTCTCTTCGATGGAAGTTTTATTTTCCGAGAATGTATCCTAATTTTTGGCCTAATTCTTCTTCTGATGATCGATTCAACCTCTGATCAAAAAGATATACCTTGGTTATATTTCATCTCTTCAACAAGTTTAGTAATGAGCATAACGGCCCTATTGTTCTGA ATGAGAGTCCAACTACATTGCATTGCCAGAATCCATGTTGTATATTTGAAAGAGGTTGACCTCCTTGCTTCTCTCATGTTACAATCCTCTTCCCGCCGAGCCCCCTTTCTCCTCGATCCACAGAGACAAAATGGAGGACTGAATGAAAACTTCATTCTCGATTCTACGAGAATTTTTATGAAAGCCTTTCATTTGCGTCTCTTCGATGGAAGTTTTATTTTCCGAGAATGTATCCTAATTTTTGGCCTAATTCTTCTTCTGATGATCGATTCAACCTCTGATCAAAAAGATATACCTTGGTTATATTTCATCTCTTCAACAAGTTTAGTAATGAGCATAACGGCCCTATTGTTCTGA ATGAGAGTCCAACTACATTGCATTGCCAGAATCCATGTTGTATATTTGAAAGAGGTTGACCTCCTTGCTTCTCTCATGTTACAATCCTCTTCCCGCCGAGCCCCCTTTCTCCTCGATCCACAGAGACAAAATGGAGGACTGAATGAAAACTTCATTCTCGATTCTACGAGAATTTTTATGAAAGCCTTTCATTTGCGTCTCTTCGATGGAAGTTTTATTTTCCGAGAATGTATCCTAATTTTTGGCCTAATTCTTCTTCTGATGATCGATTCAACCTCTGATCAAAAAGATATACCTTGGTTATATTTCATCTCTTCAACAAGTTTAGTAATGAGCATAACGGCCCTATTGTTCTGA MRVQLHCIARIHVVYLKEVDLLASLMLQSSSRRAPFLLDPQRQNGGLNENFILDSTRIFMKAFHLRLFDGSFIFRECILIFGLILLLMIDSTSDQKDIPWLYFISSTSLVMSITALLF Homology
BLAST of CmaCh00G000560 vs. ExPASy Swiss-Prot
Match: P0CC46 (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Citrus sinensis OX=2711 GN=ndhB1 PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 3.1e-30 Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0
BLAST of CmaCh00G000560 vs. ExPASy Swiss-Prot
Match: P0CC50 (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhB1 PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 3.1e-30 Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0
BLAST of CmaCh00G000560 vs. ExPASy Swiss-Prot
Match: P0CC64 (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Gossypium barbadense OX=3634 GN=ndhB1 PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 3.1e-30 Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0
BLAST of CmaCh00G000560 vs. ExPASy Swiss-Prot
Match: P0CC66 (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Gossypium hirsutum OX=3635 GN=ndhB1 PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 3.1e-30 Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0
BLAST of CmaCh00G000560 vs. ExPASy Swiss-Prot
Match: P0CC90 (NAD(P)H-quinone oxidoreductase subunit 2 A, chloroplastic OS=Manihot esculenta OX=3983 GN=ndhB1 PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 3.1e-30 Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0
BLAST of CmaCh00G000560 vs. ExPASy TrEMBL
Match: A0A2S1P5L8 (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Myriophyllum spicatum OX=208873 GN=ndhB PE=3 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 4.0e-28 Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 0
BLAST of CmaCh00G000560 vs. ExPASy TrEMBL
Match: A0A6M8YGU4 (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Myriophyllum aquaticum OX=208863 GN=ndhB PE=3 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 4.0e-28 Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 0
BLAST of CmaCh00G000560 vs. ExPASy TrEMBL
Match: A6YA17 (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Myriophyllum spicatum OX=208873 GN=ndhB PE=3 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 4.0e-28 Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 0
BLAST of CmaCh00G000560 vs. ExPASy TrEMBL
Match: A0A7G9M899 (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Euphorbia ebracteolata OX=526193 GN=ndhB PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 1.2e-27 Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0
BLAST of CmaCh00G000560 vs. ExPASy TrEMBL
Match: A0A7H9SKS1 (NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic OS=Camellia fraterna OX=542725 GN=ndhB PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 1.2e-27 Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0
BLAST of CmaCh00G000560 vs. NCBI nr
Match: YP_009490303.1 (NADH-plastoquinone oxidoreductase subunit 2 [Myriophyllum spicatum] >YP_009490318.1 NADH-plastoquinone oxidoreductase subunit 2 [Myriophyllum spicatum] >YP_009859951.1 NADH-plastoquinone oxidoreductase subunit 2 [Myriophyllum aquaticum] >YP_009859966.1 NADH-plastoquinone oxidoreductase subunit 2 [Myriophyllum aquaticum] >QXE45813.1 NAD(P)H-quinone oxidoreductase subunit 2 [Haloragodendron glandulosum] >QXE45895.1 NAD(P)H-quinone oxidoreductase subunit 2 [Haloragis aspera] >QXE45978.1 NAD(P)H-quinone oxidoreductase subunit 2 [Haloragis erecta] >QXE46061.1 NAD(P)H-quinone oxidoreductase subunit 2 [Gonocarpus micranthus] >AWH11746.1 NADH-plastoquinone oxidoreductase subunit 2 [Myriophyllum spicatum]) HSP 1 Score: 134.0 bits (336), Expect = 8.2e-28 Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 0
BLAST of CmaCh00G000560 vs. NCBI nr
Match: ABQ14877.1 (NADH-plastoquinone oxidoreductase subunit 2 [Myriophyllum spicatum]) HSP 1 Score: 134.0 bits (336), Expect = 8.2e-28 Identity = 70/73 (95.89%), Postives = 70/73 (95.89%), Query Frame = 0
BLAST of CmaCh00G000560 vs. NCBI nr
Match: ARC97547.1 (NADH-plastoquinone oxidoreductase subunit 2 [Osteomeles anthyllidifolia]) HSP 1 Score: 132.5 bits (332), Expect = 2.4e-27 Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0
BLAST of CmaCh00G000560 vs. NCBI nr
Match: YP_009419449.1 (NADH-plastoquinone oxidoreductase subunit 2 [Ternstroemia gymnanthera] >YP_009419464.1 NADH-plastoquinone oxidoreductase subunit 2 [Ternstroemia gymnanthera] >ADZ36367.1 NADH-plastoquinone oxidoreductase subunit 2 [Ternstroemia gymnanthera] >ASM45799.1 NADH-plastoquinone oxidoreductase subunit 2 [Ternstroemia gymnanthera] >ASM45800.1 NADH-plastoquinone oxidoreductase subunit 2 [Ternstroemia gymnanthera]) HSP 1 Score: 132.5 bits (332), Expect = 2.4e-27 Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0
BLAST of CmaCh00G000560 vs. NCBI nr
Match: YP_010039848.1 (NADH-plastoquinone oxidoreductase subunit 2 [Primulina ophiopogoides] >YP_010039864.1 NADH-plastoquinone oxidoreductase subunit 2 [Primulina ophiopogoides] >QOY46269.1 NADH-plastoquinone oxidoreductase subunit 2 [Primulina ophiopogoides] >QOY46270.1 NADH-plastoquinone oxidoreductase subunit 2 [Primulina ophiopogoides]) HSP 1 Score: 132.5 bits (332), Expect = 2.4e-27 Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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