CmaCh00G000510 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh00G000510
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic
Location	Cma_Chr00: 2854686 .. 2855296 (+)
RNA-Seq Expression	CmaCh00G000510
Synteny	CmaCh00G000510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGTCCTACCCCGATTTTGGCTTTTATACATGCTGCTACGATGGTAGCAGCGGGAATTTTTCTTGTCGCTCGGCTTCTTCCGCTTTTTATAGTAATACCTTACATCATGAATCTAATAGCTTTTATAGGTATAATAAGAGTACTATTTGGAGCTACTTTACCTCTTGCTCAAAAAGATATTAAGAGAAGTTTAGCCTATTCTACAATGTCTCAATTGGGATATATGATGTTAGCTTTGGGTATAGGGTCTTATCGAGTTGCTTTATTTCATTTGATTAATCATGCTTATTCAAAAGCTTTGTTGTTTTTAGGATCTGGGTCCATTATTCACTCAATGGAATCGGTTGTTGGATATTCTCCAGATAAAAGTTAGAATATGGTTCTTATGGGGGGTTTAACAAAGCATGTGCCAATTACAAAAAATGTTTTTTTATTAAGTACCCTTTCTCTTTGTGGTATTCCACCCCTTCGTGCTTTTGGTCCAAAGATGAAATTCTTAATGATTGTTGGTTGTATTCACCGATTTTCGCAATAATAGACTGTTCCACAGTAGGATTAACAGCATTTTATATGTTTCGTATCTACTTACTTTTGAGGGACATTTAA

mRNA sequence

ATGGAGGGTCCTACCCCGATTTTGGCTTTTATACATGCTGCTACGATGGTAGCAGCGGGAATTTTTCTTGTCGCTCGGCTTCTTCCGCTTTTTATATACCCTTTCTCTTTGTGGTATTCCACCCCTTCGTGCTTTTGGTCCAAAGATGAAATTCTTAATGATTGTTGGTTGTATTCACCGATTTTCGCAATAATAGACTGTTCCACAGTAGGATTAACAGCATTTTATATGTTTCGTATCTACTTACTTTTGAGGGACATTTAA

Coding sequence (CDS)

ATGGAGGGTCCTACCCCGATTTTGGCTTTTATACATGCTGCTACGATGGTAGCAGCGGGAATTTTTCTTGTCGCTCGGCTTCTTCCGCTTTTTATATACCCTTTCTCTTTGTGGTATTCCACCCCTTCGTGCTTTTGGTCCAAAGATGAAATTCTTAATGATTGTTGGTTGTATTCACCGATTTTCGCAATAATAGACTGTTCCACAGTAGGATTAACAGCATTTTATATGTTTCGTATCTACTTACTTTTGAGGGACATTTAA

Protein sequence

MEGPTPILAFIHAATMVAAGIFLVARLLPLFIYPFSLWYSTPSCFWSKDEILNDCWLYSPIFAIIDCSTVGLTAFYMFRIYLLLRDI

Homology

[Close]

BLAST of CmaCh00G000510 vs. ExPASy Swiss-Prot
Match: Q2QD43 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhF PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-17
Identity = 75/202 (37.13%), Postives = 76/202 (37.62%), Query Frame = 0


Query: 1   MEGPTPILAFIHAATMVAAGIFLVARLLPLFI-YPF------------------------ 60
           MEGPTPI A IHAATMVAAGIFLVARLLPLFI  P+                        
Sbjct: 254 MEGPTPISALIHAATMVAAGIFLVARLLPLFIAIPYIMNLIALIGIITVLFGATLALAQK 313

Query: 61  ----SLWYSTPS------------------------------------------------ 87
               SL YST S                                                
Sbjct: 314 DIKRSLAYSTMSQLGYMMLALGMGSYQAALFHLITHAYSKALLFLGSGSIIHSMESVVGY 373

[Close]

BLAST of CmaCh00G000510 vs. ExPASy Swiss-Prot
Match: Q9TL56 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Carpenteria californica OX=23101 GN=ndhF PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.8e-17
Identity = 74/199 (37.19%), Postives = 75/199 (37.69%), Query Frame = 0


Query: 1   MEGPTPILAFIHAATMVAAGIFLVARLLPLFI-YPF------------------------ 60
           MEGPTPI A IHAATMVAAGIFLVARLLPLFI  P+                        
Sbjct: 254 MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYILNLISFIGIITLLLGATLALAQK 313

Query: 61  ----SLWYSTPS------------------------------------------------ 84
               SL YST S                                                
Sbjct: 314 DIKRSLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYPKALLFLGSGSVIHSMETVVGY 373

[Close]

BLAST of CmaCh00G000510 vs. ExPASy Swiss-Prot
Match: B1A981 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Carica papaya OX=3649 GN=ndhF PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 5.0e-17
Identity = 72/202 (35.64%), Postives = 76/202 (37.62%), Query Frame = 0


Query: 1   MEGPTPILAFIHAATMVAAGIFLVARLLPLFI-YPFSLW--------------------- 60
           MEGPTPI A IHAATMVAAGIFLVARLLPLFI  P+ ++                     
Sbjct: 254 MEGPTPISALIHAATMVAAGIFLVARLLPLFIGIPYIMYLISLIGIITVLLGATLALAQK 313

Query: 61  -------YSTPS------------------------------------------------ 87
                  YST S                                                
Sbjct: 314 DIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAVVGY 373

[Close]

BLAST of CmaCh00G000510 vs. ExPASy Swiss-Prot
Match: B0Z4S2 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Oenothera argillicola OX=3940 GN=ndhF PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 8.5e-17
Identity = 73/202 (36.14%), Postives = 75/202 (37.13%), Query Frame = 0


Query: 1   MEGPTPILAFIHAATMVAAGIFLVARLLPLF-IYPF------------------------ 60
           MEGPTPI A IHAATMVAAGIFLVARLLPLF I P+                        
Sbjct: 255 MEGPTPISALIHAATMVAAGIFLVARLLPLFVITPYIMNLISLIGIITVLLGATLALAQK 314

Query: 61  ----SLWYSTPS------------------------------------------------ 87
               SL YST S                                                
Sbjct: 315 DIKRSLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMESIVGY 374

[Close]

BLAST of CmaCh00G000510 vs. ExPASy Swiss-Prot
Match: B0Z506 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Oenothera biennis OX=3942 GN=ndhF PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 8.5e-17
Identity = 73/202 (36.14%), Postives = 75/202 (37.13%), Query Frame = 0


Query: 1   MEGPTPILAFIHAATMVAAGIFLVARLLPLF-IYPF------------------------ 60
           MEGPTPI A IHAATMVAAGIFLVARLLPLF I P+                        
Sbjct: 255 MEGPTPISALIHAATMVAAGIFLVARLLPLFVITPYIMNLISLIGIITVLLGATLALAQK 314

Query: 61  ----SLWYSTPS------------------------------------------------ 87
               SL YST S                                                
Sbjct: 315 DIKRSLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMESIVGY 374

[Close]

BLAST of CmaCh00G000510 vs. ExPASy TrEMBL
Match: I1PBK9 (NAD(P)H dehydrogenase subunit 5 OS=Oryza glaberrima OX=4538 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.7e-18
Identity = 64/118 (54.24%), Postives = 68/118 (57.63%), Query Frame = 0


Query: 1   MEGPTPILAFIHAATMVAAGIFLVARLLPLFI-------------------YPFSL---- 60
           MEGPTPI A IHAATMVAAGIFL+ARLLPLFI                     F L    
Sbjct: 265 MEGPTPISALIHAATMVAAGIFLIARLLPLFISLPLIMSFISLIGTLTLFENTFQLQELV 324

Query: 61  WYSTPSC---------FWSKDEILNDCWLYSPIFAIIDCSTVGLTAFYMFRIYLLLRD 87
           +Y  P           FWSKDEIL++ WLYSP F II   T GLTAFYMFRIYLL  D
Sbjct: 325 FYGVPFLFVVFYLLLGFWSKDEILSNSWLYSPFFGIIASFTAGLTAFYMFRIYLLTFD 382

[Close]

BLAST of CmaCh00G000510 vs. ExPASy TrEMBL
Match: A0A251TXH1 (NAD(P)H dehydrogenase subunit 5 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr09g0258551 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.3e-15
Identity = 69/168 (41.07%), Postives = 71/168 (42.26%), Query Frame = 0


Query: 1   MEGPTPILAFIHAATMVAAGIFLVARLLPLFIYPF-------------SLWYSTPS---- 60
           MEGPTPI A IHAATMVAAGIFLVARL+PLFI+ F              L YST S    
Sbjct: 254 MEGPTPISALIHAATMVAAGIFLVARLMPLFIFFFGATLALAQKDIKRGLAYSTMSQLGY 313

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 314 MMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETLVGYCPKKSQNMVLMGGTLS 373

[Close]

BLAST of CmaCh00G000510 vs. ExPASy TrEMBL
Match: Q5VJA8 (NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (Fragment) OS=Brocchinia prismatica OX=261213 GN=ndhF PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.7e-15
Identity = 69/170 (40.59%), Postives = 73/170 (42.94%), Query Frame = 0


Query: 1   MEGPTPILAFIHAATMVAAGIFLVARLLPLFI-YPF------------------------ 60
           MEGPTPI A IHAATMVAAGIFLVARL+PLFI  P+                        
Sbjct: 227 MEGPTPISALIHAATMVAAGIFLVARLIPLFIVIPYIMNFISLIGVITLLLGATLALAQR 286

Query: 61  ----SLWYSTPS------------------------------------------------ 84
               SL YST S                                                
Sbjct: 287 DIKRSLAYSTMSQLGYIMLALGIGSYRAALFHLITHAYSKALLFLTRYVPITRTTFLLGT 346

[Close]

BLAST of CmaCh00G000510 vs. ExPASy TrEMBL
Match: A0A7H0M069 (NAD(P)H dehydrogenase subunit 5 (Fragment) OS=Dianthoveus cremnophilus OX=2707183 GN=ndhF PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.8e-15
Identity = 74/202 (36.63%), Postives = 76/202 (37.62%), Query Frame = 0


Query: 1   MEGPTPILAFIHAATMVAAGIFLVARLLPLFI-YPF------------------------ 60
           MEGPTPI A IHAATMVAAGIFLVARLLPLFI  P+                        
Sbjct: 254 MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGVITVLLGATLALAQR 313

Query: 61  ----SLWYSTPS------------------------------------------------ 87
               SL YST S                                                
Sbjct: 314 DIKRSLAYSTMSQLGYIMLALGIGSYRAALFHLITHAYSKALLFLGSGSIIHSMEPIVGY 373

[Close]

BLAST of CmaCh00G000510 vs. ExPASy TrEMBL
Match: A0A7H0M071 (NAD(P)H dehydrogenase subunit 5 (Fragment) OS=Evodianthus funifer OX=1289389 GN=ndhF PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.8e-15
Identity = 74/202 (36.63%), Postives = 76/202 (37.62%), Query Frame = 0


Query: 1   MEGPTPILAFIHAATMVAAGIFLVARLLPLFI-YPF------------------------ 60
           MEGPTPI A IHAATMVAAGIFLVARLLPLFI  P+                        
Sbjct: 254 MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGVITVLLGATLALAQR 313

Query: 61  ----SLWYSTPS------------------------------------------------ 87
               SL YST S                                                
Sbjct: 314 DIKRSLAYSTMSQLGYIMLALGIGSYRAALFHLITHAYSKALLFLGSGSIIHSMEPIVGY 373

[Close]

BLAST of CmaCh00G000510 vs. NCBI nr
Match: AAS68208.1 (NADH dehydrogenase subunit F, partial [Brocchinia prismatica])

HSP 1 Score: 91.7 bits (226), Expect = 3.4e-15
Identity = 69/170 (40.59%), Postives = 73/170 (42.94%), Query Frame = 0


Query: 1   MEGPTPILAFIHAATMVAAGIFLVARLLPLFI-YPF------------------------ 60
           MEGPTPI A IHAATMVAAGIFLVARL+PLFI  P+                        
Sbjct: 227 MEGPTPISALIHAATMVAAGIFLVARLIPLFIVIPYIMNFISLIGVITLLLGATLALAQR 286

Query: 61  ----SLWYSTPS------------------------------------------------ 84
               SL YST S                                                
Sbjct: 287 DIKRSLAYSTMSQLGYIMLALGIGSYRAALFHLITHAYSKALLFLTRYVPITRTTFLLGT 346

[Close]

BLAST of CmaCh00G000510 vs. NCBI nr
Match: GFP87573.1 (NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic [Phtheirospermum japonicum])

HSP 1 Score: 91.7 bits (226), Expect = 3.4e-15
Identity = 67/160 (41.88%), Postives = 70/160 (43.75%), Query Frame = 0


Query: 1   MEGPTPILAFIHAATMVAAGIFLVARLLPLFIY--------------------------- 60
           MEGPTPI A IHAATMVAAGIFLVARLLPLFI                            
Sbjct: 117 MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMMLALGMGSYRSALFHLITHAYS 176

Query: 61  -------------------------------------------------PFSLWYSTP-S 84
                                                             FSL    P +
Sbjct: 177 KALLFLGSGSVIHSMETIVGYSPDKSQNMVFMGGLTKYVPITXTSFLLGTFSLCGIPPLA 236

[Close]

BLAST of CmaCh00G000510 vs. NCBI nr
Match: QNQ15364.1 (NADH-plastoquinone oxidoreductase subunit 5, partial [Dicranopygium microcephalum])

HSP 1 Score: 90.9 bits (224), Expect = 5.9e-15
Identity = 74/202 (36.63%), Postives = 76/202 (37.62%), Query Frame = 0


Query: 1   MEGPTPILAFIHAATMVAAGIFLVARLLPLFI-YPF------------------------ 60
           MEGPTPI A IHAATMVAAGIFLVARLLPLFI  P+                        
Sbjct: 254 MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLVGVITVLLGATLALAQR 313

Query: 61  ----SLWYSTPS------------------------------------------------ 87
               SL YST S                                                
Sbjct: 314 DIKRSLAYSTMSQLGYIMLALGIGSYRAALFHLITHAYSKALLFLGSGSIIHSMEPIVGY 373

[Close]

BLAST of CmaCh00G000510 vs. NCBI nr
Match: QNQ15362.1 (NADH-plastoquinone oxidoreductase subunit 5, partial [Chorigyne cylindrica])

HSP 1 Score: 90.9 bits (224), Expect = 5.9e-15
Identity = 74/202 (36.63%), Postives = 76/202 (37.62%), Query Frame = 0


Query: 1   MEGPTPILAFIHAATMVAAGIFLVARLLPLFI-YPF------------------------ 60
           MEGPTPI A IHAATMVAAGIFLVARLLPLFI  P+                        
Sbjct: 254 MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGVITVLLGATLALAQR 313

Query: 61  ----SLWYSTPS------------------------------------------------ 87
               SL YST S                                                
Sbjct: 314 DIKRSLAYSTMSQLGYIMLALGIGSYRAALFHLITHAYSKALLFLGSGSIIHSMEPIVGY 373

[Close]

BLAST of CmaCh00G000510 vs. NCBI nr
Match: YP_009130185.1 (NADH-plastoquinone oxidoreductase subunit 5 [Carludovica palmata] >AJV88654.1 NADH-plastoquinone oxidoreductase subunit 5 [Carludovica palmata])

HSP 1 Score: 90.9 bits (224), Expect = 5.9e-15
Identity = 74/202 (36.63%), Postives = 76/202 (37.62%), Query Frame = 0


Query: 1   MEGPTPILAFIHAATMVAAGIFLVARLLPLFI-YPF------------------------ 60
           MEGPTPI A IHAATMVAAGIFLVARLLPLFI  P+                        
Sbjct: 254 MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGVITVLLGATLALAQR 313

Query: 61  ----SLWYSTPS------------------------------------------------ 87
               SL YST S                                                
Sbjct: 314 DIKRSLAYSTMSQLGYIMLALGIGSYRAALFHLITHAYSKALLFLGSGSIIHSMEPIVGY 373

[Close]

BLAST of CmaCh00G000510 vs. TAIR 10
Match: ATCG01010.1 (NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein )

HSP 1 Score: 80.1 bits (196), Expect = 9.7e-16
Identity = 72/199 (36.18%), Postives = 73/199 (36.68%), Query Frame = 0


Query: 1   MEGPTPILAFIHAATMVAAGIFLVARLLPLFI------YPFS------------------ 60
           MEGPTPI A IHAATMVAAGIFLVARLLPLFI      Y  S                  
Sbjct: 254 MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQK 313

Query: 61  -----LWYSTPS------------------------------------------------ 84
                L YST S                                                
Sbjct: 314 DIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIVGY 373

[Close]

BLAST of CmaCh00G000510 vs. TAIR 10
Match: ATMG00060.1 (NADH dehydrogenase subunit 5C )

HSP 1 Score: 52.4 bits (124), Expect = 2.2e-07
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0


Query: 1   MEGPTPILAFIHAATMVAAGIFLVARLLPLFIYP 35
           MEGPTP+ A IHAATMV AG+F++AR  PLF YP
Sbjct: 246 MEGPTPVSASIHAATMVTAGVFMIARCSPLFEYP 279

[Close]

BLAST of CmaCh00G000510 vs. TAIR 10
Match: ATMG00513.1 (NADH dehydrogenase 5A )

HSP 1 Score: 52.4 bits (124), Expect = 2.2e-07
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0


Query: 1   MEGPTPILAFIHAATMVAAGIFLVARLLPLFIYP 35
           MEGPTP+ A IHAATMV AG+F++AR  PLF YP
Sbjct: 246 MEGPTPVSASIHAATMVTAGVFMIARCSPLFEYP 279

[Close]

BLAST of CmaCh00G000510 vs. TAIR 10
Match: ATMG00665.1 (NADH dehydrogenase 5B )

HSP 1 Score: 52.4 bits (124), Expect = 2.2e-07
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0


Query: 1   MEGPTPILAFIHAATMVAAGIFLVARLLPLFIYP 35
           MEGPTP+ A IHAATMV AG+F++AR  PLF YP
Sbjct: 246 MEGPTPVSASIHAATMVTAGVFMIARCSPLFEYP 279

The following BLAST results are available for this feature:

BLAST of CmaCh00G000510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD43	1.7e-17	37.13	NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q9TL56	3.8e-17	37.19	NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Carpenteria californi...	[more]
B1A981	5.0e-17	35.64	NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Carica papaya OX=3649...	[more]
B0Z4S2	8.5e-17	36.14	NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Oenothera argillicola...	[more]
B0Z506	8.5e-17	36.14	NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Oenothera biennis OX=...	[more]

BLAST of CmaCh00G000510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
I1PBK9	4.7e-18	54.24	NAD(P)H dehydrogenase subunit 5 OS=Oryza glaberrima OX=4538 PE=3 SV=1	[more]
A0A251TXH1	1.3e-15	41.07	NAD(P)H dehydrogenase subunit 5 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr09g02...	[more]
Q5VJA8	1.7e-15	40.59	NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (Fragment) OS=Brocchinia...	[more]
A0A7H0M069	2.8e-15	36.63	NAD(P)H dehydrogenase subunit 5 (Fragment) OS=Dianthoveus cremnophilus OX=270718...	[more]
A0A7H0M071	2.8e-15	36.63	NAD(P)H dehydrogenase subunit 5 (Fragment) OS=Evodianthus funifer OX=1289389 GN=...	[more]

BLAST of CmaCh00G000510 vs. NCBI nr


Match Name	E-value	Identity	Description
AAS68208.1	3.4e-15	40.59	NADH dehydrogenase subunit F, partial [Brocchinia prismatica]	[more]
GFP87573.1	3.4e-15	41.88	NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic [Phtheirospermum japonicu...	[more]
QNQ15364.1	5.9e-15	36.63	NADH-plastoquinone oxidoreductase subunit 5, partial [Dicranopygium microcephalu...	[more]
QNQ15362.1	5.9e-15	36.63	NADH-plastoquinone oxidoreductase subunit 5, partial [Chorigyne cylindrica]	[more]
YP_009130185.1	5.9e-15	36.63	NADH-plastoquinone oxidoreductase subunit 5 [Carludovica palmata] >AJV88654.1 NA...	[more]

BLAST of CmaCh00G000510 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01010.1	9.7e-16	36.18	NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein	[more]
ATMG00060.1	2.2e-07	70.59	NADH dehydrogenase subunit 5C	[more]
ATMG00513.1	2.2e-07	70.59	NADH dehydrogenase 5A	[more]
ATMG00665.1	2.2e-07	70.59	NADH dehydrogenase 5B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001750	NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit	PFAM	PF00361	Proton_antipo_M	coord: 1..39 e-value: 1.0E-5 score: 24.9
None	No IPR available	PANTHER	PTHR42829:SF2	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5	coord: 1..35
None	No IPR available	PANTHER	PTHR42829	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5	coord: 42..84
None	No IPR available	PANTHER	PTHR42829	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5	coord: 1..35
None	No IPR available	PANTHER	PTHR42829:SF2	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5	coord: 42..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G000510.1	CmaCh00G000510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity