CmaCh00G000220 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCTACTACCAGAAACTCAATGCGTAATCTTAGCATTCAATGTGTATTCCCTCATAATCTCATCATTCATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGTCAGATTAGTCAAGATTTCTATGTTTCGATGCAACAACAAGATGTTCTTTGTAAGAAGTCGTTTTGTTGGTTGGTTAATTGGTTACATTTTCTTCATTCAATGGGTTGGATTGATATTAGTCTGGCTACAGCAAAAGAATTCTATGTAGATCTAATAAGTACCTTGTGTCAGAATTGAGAAATTCTATGGCTCGAATCTTTAGTATTCTCTTATTACTTGTGTCTACTATTTAGGCGGAATACCTTCACCCATTCTGACTAAGAAACTGAAAGAAACGGAGGGGACTAAACAGGAACAAGAGGGATCTACCGAAGAAGATACTTCTCCTTCCCATTGTTTCGGAAGAAAAGAAGGATCCGGACAAAATCAATGA ATGGATCTACTACCAGAAACTCAATGCGTAATCTTAGCATTCAATGTGTATTCCCTCATAATCTCATCATTCATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGTCAGATTAGTCAAGATTTCTATGTTTCGATGCAACAACAAGATGTTCTTTGTAAGAAGTCGTTTTGTTGGTTGGTTAATTGGTTACATTTTCTTCATTCAATGGGTTGGATTGATATTAGTCTGGCTACAGCAAAAGAATTCTATGTAGATCTAATAAGCGGAATACCTTCACCCATTCTGACTAAGAAACTGAAAGAAACGGAGGGGACTAAACAGGAACAAGAGGGATCTACCGAAGAAGATACTTCTCCTTCCCATTGTTTCGGAAGAAAAGAAGGATCCGGACAAAATCAATGA ATGGATCTACTACCAGAAACTCAATGCGTAATCTTAGCATTCAATGTGTATTCCCTCATAATCTCATCATTCATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGTCAGATTAGTCAAGATTTCTATGTTTCGATGCAACAACAAGATGTTCTTTGTAAGAAGTCGTTTTGTTGGTTGGTTAATTGGTTACATTTTCTTCATTCAATGGGTTGGATTGATATTAGTCTGGCTACAGCAAAAGAATTCTATGTAGATCTAATAAGCGGAATACCTTCACCCATTCTGACTAAGAAACTGAAAGAAACGGAGGGGACTAAACAGGAACAAGAGGGATCTACCGAAGAAGATACTTCTCCTTCCCATTGTTTCGGAAGAAAAGAAGGATCCGGACAAAATCAATGA MDLLPETQCVILAFNVYSLIISSFIIQPFHFTKFNVSQISQDFYVSMQQQDVLCKKSFCWLVNWLHFLHSMGWIDISLATAKEFYVDLISGIPSPILTKKLKETEGTKQEQEGSTEEDTSPSHCFGRKEGSGQNQ Homology
BLAST of CmaCh00G000220 vs. ExPASy Swiss-Prot
Match: Q09WW0 (Protein TIC 214 OS=Morus indica OX=248361 GN=TIC214 PE=3 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.5e-04 Identity = 32/56 (57.14%), Postives = 32/56 (57.14%), Query Frame = 0
BLAST of CmaCh00G000220 vs. ExPASy TrEMBL
Match: A0A410PAD6 (Protein TIC 214 OS=Commiphora gileadensis OX=1700993 GN=ycf1 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 1.3e-22 Identity = 52/61 (85.25%), Postives = 54/61 (88.52%), Query Frame = 0
BLAST of CmaCh00G000220 vs. ExPASy TrEMBL
Match: A0A650F2E1 (Hypothetical chloroplast RF19 OS=Senegalia senegal OX=138043 GN=ycf1 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.4e-16 Identity = 43/61 (70.49%), Postives = 47/61 (77.05%), Query Frame = 0
BLAST of CmaCh00G000220 vs. ExPASy TrEMBL
Match: A0A6G9DXW9 (Ycf1 OS=Sinomenium acutum OX=152363 GN=ycf1 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 7.5e-15 Identity = 39/61 (63.93%), Postives = 46/61 (75.41%), Query Frame = 0
BLAST of CmaCh00G000220 vs. ExPASy TrEMBL
Match: A0A6J1EVN9 (LOW QUALITY PROTEIN: uncharacterized protein LOC111436405 OS=Cucurbita moschata OX=3662 GN=LOC111436405 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 5.4e-13 Identity = 47/76 (61.84%), Postives = 52/76 (68.42%), Query Frame = 0
BLAST of CmaCh00G000220 vs. ExPASy TrEMBL
Match: A0A4P8JN90 (Protein TIC 214 OS=Plantago ovata OX=185002 GN=ycf1 PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 7.8e-12 Identity = 48/90 (53.33%), Postives = 55/90 (61.11%), Query Frame = 0
BLAST of CmaCh00G000220 vs. NCBI nr
Match: YP_009561670.1 (hypothetical chloroplast RF19 [Commiphora gileadensis] >QAT19758.1 hypothetical chloroplast RF19 [Commiphora gileadensis]) HSP 1 Score: 115.9 bits (289), Expect = 2.7e-22 Identity = 52/61 (85.25%), Postives = 54/61 (88.52%), Query Frame = 0
BLAST of CmaCh00G000220 vs. NCBI nr
Match: YP_009724465.1 (hypothetical chloroplast RF19 [Senegalia senegal] >QGT77101.1 hypothetical chloroplast RF19 [Senegalia senegal]) HSP 1 Score: 95.9 bits (237), Expect = 2.8e-16 Identity = 43/61 (70.49%), Postives = 47/61 (77.05%), Query Frame = 0
BLAST of CmaCh00G000220 vs. NCBI nr
Match: YP_009755462.1 (Ycf1 [Sinomenium acutum] >QIP53864.1 Ycf1 [Sinomenium acutum]) HSP 1 Score: 90.1 bits (222), Expect = 1.6e-14 Identity = 39/61 (63.93%), Postives = 46/61 (75.41%), Query Frame = 0
BLAST of CmaCh00G000220 vs. NCBI nr
Match: XP_022929945.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111436405 [Cucurbita moschata]) HSP 1 Score: 84.0 bits (206), Expect = 1.1e-12 Identity = 47/76 (61.84%), Postives = 52/76 (68.42%), Query Frame = 0
BLAST of CmaCh00G000220 vs. NCBI nr
Match: QCP70999.1 (hypothetical chloroplast RF19 [Plantago ovata]) HSP 1 Score: 80.1 bits (196), Expect = 1.6e-11 Identity = 48/90 (53.33%), Postives = 55/90 (61.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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