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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGTGGTCGTAGAGAGATTAACGAAGTCAGCACATTTCCTCCCCGGCAAGGCCACCTATATAGTGGACATGTGGCGCAACTGTACATGAAGGAAATCGTCAGGTTGCATGGGGTCCCCGTGTCGATTGTATCATACCGAGATCCACGGTTTACTTCGGCATTTTGGCGTGGACTCCAGAAGGCGTTGGGCACTCGACTGGACTTTAGCACAGCGTATCACCCACAGACAAATGGCCAAACGGAATGCTTAAACCAAGTTCTAGAGGATATGTTGCGGGCCCGTGTACTGGATTTCTCTGGGAGTTGGGACTCGATATTGCACCTTATGGAATTCACTTATAATAACAGCTACCAGGCAACAATCGGTATGGCACCGTACGAGGCATTGTATAGAAGGCGGTGTAGGACACCATTATGCTGGGGCGAGGTAGGAGAACGGGAACTGGTGGGTCCGGAGCTGGTCCAAGTCACGAACGAGGCGATGCAACAGATCAAGGGGAGGATGCGCACTGCTCAGAGTAGACAGAAGAGTTACGCGGACTCGAGACGAAGAAACCTGGAGTTCGAAGTGGGTGACATGGTATTCCTGAAGGTGGCCCCTATGAAGGGCGTTCTAAGGTTCGGACGCAAGGGCAAATTAAGTCCGCGCTTCATAGGACCCTTCGGGATTTTGGAGCGAATCGGACCCATTGAATATAGGTTAGCCCTATCCCCGCCTGTCTCGTCCATACACAACGTGTTCCATGTATCGACCCTTCGCAAGTATTTAGCGAACCCCACGCACGTGATAGATTATTCAACCCTGGACATGACCAAAGACTTAAGCTACGAGGAGAAACCAGTGGGGGTCCTAGCTCGCAAGGTAAAGACCTTGCGCACTAGGGAAATTGCATTTGTCAAGGTGTGGTGGGGGAACTAG mRNA sequence ATGGGTGGTCGTAGAGAGATTAACGAAGTCAGCACATTTCCTCCCCGGCAAGGCCACCTATATAGTGGACATGTGGCGCAACTGTACATGAAGGAAATCGTCAGGTTGCATGGGGTCCCCGTGTCGATTGTATCATACCGAGATCCACGGTTTACTTCGGCATTTTGGCGTGGACTCCAGAAGGCGTTGGGCACTCGACTGGACTTTAGCACAGCGTATCACCCACAGACAAATGGCCAAACGGAATGCTTAAACCAAGTTCTAGAGGATATGTTGCGGGCCCGTGTACTGGATTTCTCTGGGAGTTGGGACTCGATATTGCACCTTATGGAATTCACTTATAATAACAGCTACCAGGCAACAATCGGTATGGCACCGTACGAGGCATTGTATAGAAGGCGGTGTAGGACACCATTATGCTGGGGCGAGGTAGGAGAACGGGAACTGGTGGGTCCGGAGCTGGTCCAAGTCACGAACGAGGCGATGCAACAGATCAAGGGGAGGATGCGCACTGCTCAGAGTAGACAGAAGAGTTACGCGGACTCGAGACGAAGAAACCTGGAGTTCGAAGTGGGTGACATGGTATTCCTGAAGGTGGCCCCTATGAAGGGCGTTCTAAGGTTCGGACGCAAGGGCAAATTAAGTCCGCGCTTCATAGGACCCTTCGGGATTTTGGAGCGAATCGGACCCATTGAATATAGGTTAGCCCTATCCCCGCCTGTCTCGTCCATACACAACGTGTTCCATGTATCGACCCTTCGCAAGTATTTAGCGAACCCCACGCACGTGATAGATTATTCAACCCTGGACATGACCAAAGACTTAAGCTACGAGGAGAAACCAGTGGGGGTCCTAGCTCGCAAGGTAAAGACCTTGCGCACTAGGGAAATTGCATTTGTCAAGGTGTGGTGGGGGAACTAG Coding sequence (CDS) ATGGGTGGTCGTAGAGAGATTAACGAAGTCAGCACATTTCCTCCCCGGCAAGGCCACCTATATAGTGGACATGTGGCGCAACTGTACATGAAGGAAATCGTCAGGTTGCATGGGGTCCCCGTGTCGATTGTATCATACCGAGATCCACGGTTTACTTCGGCATTTTGGCGTGGACTCCAGAAGGCGTTGGGCACTCGACTGGACTTTAGCACAGCGTATCACCCACAGACAAATGGCCAAACGGAATGCTTAAACCAAGTTCTAGAGGATATGTTGCGGGCCCGTGTACTGGATTTCTCTGGGAGTTGGGACTCGATATTGCACCTTATGGAATTCACTTATAATAACAGCTACCAGGCAACAATCGGTATGGCACCGTACGAGGCATTGTATAGAAGGCGGTGTAGGACACCATTATGCTGGGGCGAGGTAGGAGAACGGGAACTGGTGGGTCCGGAGCTGGTCCAAGTCACGAACGAGGCGATGCAACAGATCAAGGGGAGGATGCGCACTGCTCAGAGTAGACAGAAGAGTTACGCGGACTCGAGACGAAGAAACCTGGAGTTCGAAGTGGGTGACATGGTATTCCTGAAGGTGGCCCCTATGAAGGGCGTTCTAAGGTTCGGACGCAAGGGCAAATTAAGTCCGCGCTTCATAGGACCCTTCGGGATTTTGGAGCGAATCGGACCCATTGAATATAGGTTAGCCCTATCCCCGCCTGTCTCGTCCATACACAACGTGTTCCATGTATCGACCCTTCGCAAGTATTTAGCGAACCCCACGCACGTGATAGATTATTCAACCCTGGACATGACCAAAGACTTAAGCTACGAGGAGAAACCAGTGGGGGTCCTAGCTCGCAAGGTAAAGACCTTGCGCACTAGGGAAATTGCATTTGTCAAGGTGTGGTGGGGGAACTAG Protein sequence MGGRREINEVSTFPPRQGHLYSGHVAQLYMKEIVRLHGVPVSIVSYRDPRFTSAFWRGLQKALGTRLDFSTAYHPQTNGQTECLNQVLEDMLRARVLDFSGSWDSILHLMEFTYNNSYQATIGMAPYEALYRRRCRTPLCWGEVGERELVGPELVQVTNEAMQQIKGRMRTAQSRQKSYADSRRRNLEFEVGDMVFLKVAPMKGVLRFGRKGKLSPRFIGPFGILERIGPIEYRLALSPPVSSIHNVFHVSTLRKYLANPTHVIDYSTLDMTKDLSYEEKPVGVLARKVKTLRTREIAFVKVWWGN
Homology
BLAST of CmaCh00G000070 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.6e-25 Identity = 79/280 (28.21%), Postives = 135/280 (48.21%), Query Frame = 0
Query: 26 AQLYMKEIVRLHGVPVSIVSYRDPRFTSAFWRGLQKALGTRLDFSTAYHPQTNGQTECLN 85
A+++ + ++ G P I++ D FTS W+ + FS Y PQT+GQTE N
Sbjct: 1030 ARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTN 1089
Query: 86 QVLEDMLRARVLDFSGSWDSILHLMEFTYNNSYQATIGMAPYEALYR-RRCRTPLCWGEV 145
Q +E +LR +W + L++ +YNN+ + M P+E ++R +PL
Sbjct: 1090 QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSF 1149
Query: 146 GERELVGPELVQVTNEAMQQIKGRMRTAQSRQKSYADSRRRNL-EFEVGDMVFLKVAPMK 205
++ E Q T + Q +K + T + K Y D + + + EF+ GD+V +K
Sbjct: 1150 SDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKT 1209
Query: 206 GVLRFGRKGKLSPRFIGPFGILERIGPIEYRLALSPPVSSI-HNVFHVSTLRKYLANPTH 265
G L + KL+P F GPF +L++ GP Y L L + + + FHVS L KY N
Sbjct: 1210 GFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHNSE- 1269
Query: 266 VIDYSTLDMTKDLSYEEKPVGVLARKVKTLRTREIAFVKV 303
++Y+T+D E +G + ++ ++ ++ V
Sbjct: 1270 -LNYATID--------ESDIGTILHILEHKNREQVLYLNV 1293
BLAST of CmaCh00G000070 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.6e-25 Identity = 79/280 (28.21%), Postives = 135/280 (48.21%), Query Frame = 0
Query: 26 AQLYMKEIVRLHGVPVSIVSYRDPRFTSAFWRGLQKALGTRLDFSTAYHPQTNGQTECLN 85
A+++ + ++ G P I++ D FTS W+ + FS Y PQT+GQTE N
Sbjct: 1030 ARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTN 1089
Query: 86 QVLEDMLRARVLDFSGSWDSILHLMEFTYNNSYQATIGMAPYEALYR-RRCRTPLCWGEV 145
Q +E +LR +W + L++ +YNN+ + M P+E ++R +PL
Sbjct: 1090 QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSF 1149
Query: 146 GERELVGPELVQVTNEAMQQIKGRMRTAQSRQKSYADSRRRNL-EFEVGDMVFLKVAPMK 205
++ E Q T + Q +K + T + K Y D + + + EF+ GD+V +K
Sbjct: 1150 SDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKT 1209
Query: 206 GVLRFGRKGKLSPRFIGPFGILERIGPIEYRLALSPPVSSI-HNVFHVSTLRKYLANPTH 265
G L + KL+P F GPF +L++ GP Y L L + + + FHVS L KY N
Sbjct: 1210 GFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHNSE- 1269
Query: 266 VIDYSTLDMTKDLSYEEKPVGVLARKVKTLRTREIAFVKV 303
++Y+T+D E +G + ++ ++ ++ V
Sbjct: 1270 -LNYATID--------ESDIGTILHILEHKNREQVLYLNV 1293
BLAST of CmaCh00G000070 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.6e-25 Identity = 79/280 (28.21%), Postives = 135/280 (48.21%), Query Frame = 0
Query: 26 AQLYMKEIVRLHGVPVSIVSYRDPRFTSAFWRGLQKALGTRLDFSTAYHPQTNGQTECLN 85
A+++ + ++ G P I++ D FTS W+ + FS Y PQT+GQTE N
Sbjct: 1030 ARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTN 1089
Query: 86 QVLEDMLRARVLDFSGSWDSILHLMEFTYNNSYQATIGMAPYEALYR-RRCRTPLCWGEV 145
Q +E +LR +W + L++ +YNN+ + M P+E ++R +PL
Sbjct: 1090 QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSF 1149
Query: 146 GERELVGPELVQVTNEAMQQIKGRMRTAQSRQKSYADSRRRNL-EFEVGDMVFLKVAPMK 205
++ E Q T + Q +K + T + K Y D + + + EF+ GD+V +K
Sbjct: 1150 SDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKT 1209
Query: 206 GVLRFGRKGKLSPRFIGPFGILERIGPIEYRLALSPPVSSI-HNVFHVSTLRKYLANPTH 265
G L + KL+P F GPF +L++ GP Y L L + + + FHVS L KY N
Sbjct: 1210 GFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHNSE- 1269
Query: 266 VIDYSTLDMTKDLSYEEKPVGVLARKVKTLRTREIAFVKV 303
++Y+T+D E +G + ++ ++ ++ V
Sbjct: 1270 -LNYATID--------ESDIGTILHILEHKNREQVLYLNV 1293
BLAST of CmaCh00G000070 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.6e-25 Identity = 79/280 (28.21%), Postives = 135/280 (48.21%), Query Frame = 0
Query: 26 AQLYMKEIVRLHGVPVSIVSYRDPRFTSAFWRGLQKALGTRLDFSTAYHPQTNGQTECLN 85
A+++ + ++ G P I++ D FTS W+ + FS Y PQT+GQTE N
Sbjct: 1030 ARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTN 1089
Query: 86 QVLEDMLRARVLDFSGSWDSILHLMEFTYNNSYQATIGMAPYEALYR-RRCRTPLCWGEV 145
Q +E +LR +W + L++ +YNN+ + M P+E ++R +PL
Sbjct: 1090 QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSF 1149
Query: 146 GERELVGPELVQVTNEAMQQIKGRMRTAQSRQKSYADSRRRNL-EFEVGDMVFLKVAPMK 205
++ E Q T + Q +K + T + K Y D + + + EF+ GD+V +K
Sbjct: 1150 SDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKT 1209
Query: 206 GVLRFGRKGKLSPRFIGPFGILERIGPIEYRLALSPPVSSI-HNVFHVSTLRKYLANPTH 265
G L + KL+P F GPF +L++ GP Y L L + + + FHVS L KY N
Sbjct: 1210 GFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHNSE- 1269
Query: 266 VIDYSTLDMTKDLSYEEKPVGVLARKVKTLRTREIAFVKV 303
++Y+T+D E +G + ++ ++ ++ V
Sbjct: 1270 -LNYATID--------ESDIGTILHILEHKNREQVLYLNV 1293
BLAST of CmaCh00G000070 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.6e-25 Identity = 79/280 (28.21%), Postives = 135/280 (48.21%), Query Frame = 0
Query: 26 AQLYMKEIVRLHGVPVSIVSYRDPRFTSAFWRGLQKALGTRLDFSTAYHPQTNGQTECLN 85
A+++ + ++ G P I++ D FTS W+ + FS Y PQT+GQTE N
Sbjct: 1030 ARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTN 1089
Query: 86 QVLEDMLRARVLDFSGSWDSILHLMEFTYNNSYQATIGMAPYEALYR-RRCRTPLCWGEV 145
Q +E +LR +W + L++ +YNN+ + M P+E ++R +PL
Sbjct: 1090 QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSF 1149
Query: 146 GERELVGPELVQVTNEAMQQIKGRMRTAQSRQKSYADSRRRNL-EFEVGDMVFLKVAPMK 205
++ E Q T + Q +K + T + K Y D + + + EF+ GD+V +K
Sbjct: 1150 SDKT---DENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKT 1209
Query: 206 GVLRFGRKGKLSPRFIGPFGILERIGPIEYRLALSPPVSSI-HNVFHVSTLRKYLANPTH 265
G L + KL+P F GPF +L++ GP Y L L + + + FHVS L KY N
Sbjct: 1210 GFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHNSE- 1269
Query: 266 VIDYSTLDMTKDLSYEEKPVGVLARKVKTLRTREIAFVKV 303
++Y+T+D E +G + ++ ++ ++ V
Sbjct: 1270 -LNYATID--------ESDIGTILHILEHKNREQVLYLNV 1293
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9UR07 | 1.6e-25 | 28.21 | Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... | [more] |
| P0CT41 | 1.6e-25 | 28.21 | Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... | [more] |
| P0CT34 | 1.6e-25 | 28.21 | Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... | [more] |
| P0CT35 | 1.6e-25 | 28.21 | Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... | [more] |
| P0CT36 | 1.6e-25 | 28.21 | Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0015074 |
DNA integration |
| biological_process |
GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
| biological_process |
GO:1901800 |
positive regulation of proteasomal protein catabolic process |
| biological_process |
GO:0006278 |
RNA-dependent DNA biosynthetic process |
| cellular_component |
GO:0005737 |
cytoplasm |
| cellular_component |
GO:0005634 |
nucleus |
| cellular_component |
GO:0000502 |
proteasome complex |
| molecular_function |
GO:0004190 |
aspartic-type endopeptidase activity |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0016887 |
ATP hydrolysis activity |
| molecular_function |
GO:0004519 |
endonuclease activity |
| molecular_function |
GO:0003676 |
nucleic acid binding |
| molecular_function |
GO:0036402 |
proteasome-activating activity |
| molecular_function |
GO:0003964 |
RNA-directed DNA polymerase activity |
| molecular_function |
GO:0008194 |
UDP-glycosyltransferase activity |
| molecular_function |
GO:0008270 |
zinc ion binding |
|
