CmUC11G222870 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC11G222870
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	UPF0047 protein like
Location	CmU531Chr11: 30830513 .. 30833508 (-)
RNA-Seq Expression	CmUC11G222870
Synteny	CmUC11G222870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAGGCGCTATTCTCTTGGCTTCACAGCCACTCCGCGTAAAGTTGTCGTGGAGCAGCAATTCCAGTACTGGTAATCCGTCCGCAACCGCACGCTCTGGCAATCCAAGCTTGATGGCGGCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTACGCTGCCTCCTCATAGGCGGGGCTGTCATCTCATCACCCCGAAGGTGATTAATTGGTTATCTTTTCCCACCTTATCCAGAATCTCGTATCCATCTCCCGGGGTTTAAATGGTGCCAACTTTTTGTTTTTATTTTATTTCTGTTCATAAGTTCCGGTTGCTTCTTAGTCTAGCTCAGGCCTGTCATCTACATATATCAGTTTGACTTTTCCGAACAATAGACGAAAATGTCATGTTCTGTAGATGCATCCGAAACAATTCTTTTTGTTGCCTTGCTAAAATTGTTCATTTCAACATTAATATGATATCCGATTTGTTTTCCTCACATTGCTGCTACTGAGTTTGATTTCTATAGCAGATAATAAAAGAAATTGGGCAAGACTTATCAGAATTCAAATGTGGCCTTGCTCATATCTTCTGTAAATCTTCTAATCCCGTTTTTCTATTTTGGAGATTAGTGTAGTTGGATTTCTTTGTTGAATCATTTGATGATGTTTCAGTGCAGCATACGAGTGCCTCTCTTACCATCAATGAAAACTATGATTTGGATGTTCGGAGTGATACTGAAACCTTCCTCAACAAGATAGTGCCTGAAGTTAGTTTGCTATCCGCACATATCATTTGCAACTGTCATTCGTCGCGAGCTATCCCATTTTGACCTTTGTTTCTCTCTCCCACTCTCATTTGGGGGGGCTGTTTGCAGGGTACATCTGCTCCTTGGAAGCATACACTTGAAGGTTATCAAATTTTATTTCCTTCTACTTTATTCTATTAAGAAGAGCTTTTCCCTTTTCTAGTTTTATGATTTCATATACTGAAAAAGAAAATGTACTCTAGTAAAAGGGCCCGTGCTTTTGTCTCCATCATAATAATATTGTAAGGCAATTTGAGCTCTTGTTAGTTGTAATGTATAGGATGCTGATGGAGGTGCTTCCTGGCTATGATGGAGGATGGATTATGATAGATGTTGGGTAGTTTATGAAAAAAGACAGAAAATGTAAAATCAACCAACCAATGGAAATAATATATGAAGAGCAAGTAGGCTGGAACAAAATTTATCCGGAGTAGTCTCATTTTAATTTGACAGGTTATCTTTAGACATGTGGTAGGTGGGTAGGTTTTCCAAAACTGCATTACATAAAGTTAGCCAACCCTTTCTAGACAAATTATACATTTTCCATCTATCAAGTTTTAGGTAAACTTTGTCAATAATAGGCTGCAAAAAGTGTGTTGTTTTGGATATCCACCAAGAGGCAAGCCTAGGTACGAAAGGCAATTTACCTGATGTGCAATTCAATCTAGAGGAAGTAGAATTCAAGGTCGCCTCATCAACATTAACTCTATATAGTGGTGACTTCTCCCAATTAACTTTCTGCCCCGAGCACCATTCAAATAAACCAATTGTTTGGATAAGAATGACTAACATGGCCTCATCATACTTGCAAAATAGAAGGGAATCTGCGAATTGCAAGATTGATAAATGGACTTTGTCTTTGCCTACCAAGAAACCTTCATACACTCAACTTCCATGAGCTCTATTGATTGAAGCCCCAAGCACTTCACTAATAACGAGAAATAGAAATGGTGATAATGGATCACTTTGTCTAATTCCCCTAGAAGCTTGATTGCGACCTCTAGGCCTTCCATTGATGTACACAGAAAATTTTGGGTTTTGAATACATCCATTGATCCATTCTACCCATTTTGGATGAAAACCCAAAAGAGTGAGAATCCGTTCCAATCAACACGATCAAATGCTTTCTCAAGGAGCATTTGAGGACTAGGTTTCTTGTACGTCCTTGTATTCTTTCATTTCATCTCAATGAAAGTAATTGTTTCTATAAAGAAAAGTTGTATCTGAGGAATATTTACACAATTGTCTTGTTTTTCCTATCCTAGAGTCGTTTCAACCATTCCTTTGTGTGTGTGTGTATTATATATAATTTTTTATTTTAGACATTTACTCATTTGATAATGAATGTGCTCATTGTGCAGGCCCGGATGACATGCCAGCACACATTAAATCATCAATGTTTGGCTGTGCACTCACGTGGGTCATTCTACATAGTTTCTGGATTAAATACCTACTTGACATGCTGTTCTTATTTGTGATTGTTCTTTTGTAGGATTCCAATAACAAATGGAAAGTTTAATATGGGTACTTGGCAGGTACAGTTTAGTCGGTCCTTTTATTTATTTTTATAGTTTTTCCATTAAATAAAAAACTAACAATTTTTGTTAATAGTGAGAATGATTAATTGGTGAAATTTAATTTAAATATTGATTCTTTATTCATTTAGTTGAATAATTGGGATTTAGGTGTTTTTGGTATATCAGAATGAGAGAATGATCCTTCTTGGTACACAATTTGTAATTTAGGTATGAGAAGAAATCATTCCTTAGCCTTATATACTTATGAACGAGGGATCTGTACCTTTCCAAAGTTTTGGGTTTTCAACTTTTCCCTCTGCCTAGGATTAAACTTCTCTTCTTACTTCTTCAGTTCTCCAAAATTTGGTTTGAGTTTCGAGTATTTGTTTCCTTCTCAAACATGATTCCAATTGCCTTATTTTTAATGTCGTCGTCTATTAGTTTGGAGTAGGAGTGGCTATCGAGGAGTTTTTTTTTTGGGAAGGAAAGAATGGTAGTAGTAAGATCAACCATTTGGTGCATTGGCAAGTAGTTTCCGATTCTCGTTCCCATGGTGGTCTCGGCATTGGTGCTTTGAAGCATAGGAATTTGGCTTTTCATGCTAAATGGGGTTGGAGGTTTATGCAACAACCTCACTCCCTTTGGAGAAAGGTGATTATTAGTACTCATGGAAGAAGTTTGAATCGTTATTGA

mRNA sequence

ATGCCAGGCGCTATTCTCTTGGCTTCACAGCCACTCCGCGTAAAGTTGTCGTGGAGCAGCAATTCCAGTACTGGTAATCCGTCCGCAACCGCACGCTCTGGCAATCCAAGCTTGATGGCGGCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTACGCTGCCTCCTCATAGGCGGGGCTGTCATCTCATCACCCCGAAGATAATAAAAGAAATTGGGCAAGACTTATCAGAATTCAAATGTGGCCTTGCTCATATCTTCTTGCAGCATACGAGTGCCTCTCTTACCATCAATGAAAACTATGATTTGGATGTTCGGAGTGATACTGAAACCTTCCTCAACAAGATAGTGCCTGAAGGTACATCTGCTCCTTGGAAGCATACACTTGAAGGCCCGGATGACATGCCAGCACACATTAAATCATCAATGTTTGGCTGTGCACTCACGATTCCAATAACAAATGGAAAGTTTAATATGGGTACTTGGCAGTTTGGAGTAGGAGTGGCTATCGAGGAGTTTTTTTTTTGGGAAGGAAAGAATGGTAGTAGTAAGATCAACCATTTGGTGCATTGGCAAGTAGTTTCCGATTCTCGTTCCCATGGTGGTCTCGGCATTGGTGCTTTGAAGCATAGGAATTTGGCTTTTCATGCTAAATGGGGTTGGAGGTTTATGCAACAACCTCACTCCCTTTGGAGAAAGGTGATTATTAGTACTCATGGAAGAAGTTTGAATCGTTATTGA

Coding sequence (CDS)

ATGCCAGGCGCTATTCTCTTGGCTTCACAGCCACTCCGCGTAAAGTTGTCGTGGAGCAGCAATTCCAGTACTGGTAATCCGTCCGCAACCGCACGCTCTGGCAATCCAAGCTTGATGGCGGCCGCTGGTCCGAAGTGGGCTCAGAAGACTGTTACGCTGCCTCCTCATAGGCGGGGCTGTCATCTCATCACCCCGAAGATAATAAAAGAAATTGGGCAAGACTTATCAGAATTCAAATGTGGCCTTGCTCATATCTTCTTGCAGCATACGAGTGCCTCTCTTACCATCAATGAAAACTATGATTTGGATGTTCGGAGTGATACTGAAACCTTCCTCAACAAGATAGTGCCTGAAGGTACATCTGCTCCTTGGAAGCATACACTTGAAGGCCCGGATGACATGCCAGCACACATTAAATCATCAATGTTTGGCTGTGCACTCACGATTCCAATAACAAATGGAAAGTTTAATATGGGTACTTGGCAGTTTGGAGTAGGAGTGGCTATCGAGGAGTTTTTTTTTTGGGAAGGAAAGAATGGTAGTAGTAAGATCAACCATTTGGTGCATTGGCAAGTAGTTTCCGATTCTCGTTCCCATGGTGGTCTCGGCATTGGTGCTTTGAAGCATAGGAATTTGGCTTTTCATGCTAAATGGGGTTGGAGGTTTATGCAACAACCTCACTCCCTTTGGAGAAAGGTGATTATTAGTACTCATGGAAGAAGTTTGAATCGTTATTGA

Protein sequence

MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQFGVGVAIEEFFFWEGKNGSSKINHLVHWQVVSDSRSHGGLGIGALKHRNLAFHAKWGWRFMQQPHSLWRKVIISTHGRSLNRY

Homology

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BLAST of CmUC11G222870 vs. NCBI nr
Match: XP_022936473.1 (uncharacterized protein LOC111443082 [Cucurbita moschata] >XP_023521112.1 uncharacterized protein LOC111784738 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.2 bits (814), Expect = 6.4e-83
Identity = 150/162 (92.59%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGC 60
           M GA+LLA+QPLRVKL WS+NSSTGNPSATA +GNPSLMAAAGPKWAQKTVTLPPHRRGC
Sbjct: 1   MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGC 60

Query: 61  HLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGT 120
           HLITPKI+KEIG+DLSEFKCGLAHIFLQHTSASLTINENYD DVRSDTETFLN IVPEGT
Sbjct: 61  HLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGT 120

Query: 121 SAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ 163
           SAPWKHTLEGPDDMPAHIKSSMFGCALT+PITNGKFNMGTWQ
Sbjct: 121 SAPWKHTLEGPDDMPAHIKSSMFGCALTVPITNGKFNMGTWQ 162

[Close]

BLAST of CmUC11G222870 vs. NCBI nr
Match: KAG6591177.1 (hypothetical protein SDJN03_13523, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 316.2 bits (809), Expect = 2.4e-82
Identity = 149/162 (91.98%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGC 60
           M GA+LLA+QPLRVKL W +NSSTGNPSATA +GNPSLMAAAGPKWAQKTVTLPPHRRGC
Sbjct: 1   MQGAVLLAAQPLRVKLLWRNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGC 60

Query: 61  HLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGT 120
           HLITPKI+KEIG+DLSEFKCGLAHIFLQHTSASLTINENYD DVRSDTETFLN IVPEGT
Sbjct: 61  HLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGT 120

Query: 121 SAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ 163
           SAPWKHTLEGPDDMPAHIKSSMFGCALT+PITNGKFNMGTWQ
Sbjct: 121 SAPWKHTLEGPDDMPAHIKSSMFGCALTVPITNGKFNMGTWQ 162

[Close]

BLAST of CmUC11G222870 vs. NCBI nr
Match: XP_038897717.1 (UPF0047 protein C4A8.02c [Benincasa hispida])

HSP 1 Score: 315.1 bits (806), Expect = 5.4e-82
Identity = 151/162 (93.21%), Postives = 155/162 (95.68%), Query Frame = 0


Query: 1   MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGC 60
           M GAIL A+QPLR+KL W+SNSSTGN SATARSGN SLMAAAGPKWAQKTVTLPPHRRGC
Sbjct: 15  MQGAILSAAQPLRIKLLWNSNSSTGNSSATARSGNTSLMAAAGPKWAQKTVTLPPHRRGC 74

Query: 61  HLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGT 120
           HLITPKI+KEIG DLSEFKCGLAHIFLQHTSASLTINENYD DVRSDTETFLNKIVPEGT
Sbjct: 75  HLITPKIMKEIGPDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNKIVPEGT 134

Query: 121 SAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ 163
           SAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ
Sbjct: 135 SAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ 176

[Close]

BLAST of CmUC11G222870 vs. NCBI nr
Match: XP_022976235.1 (uncharacterized protein LOC111476694 [Cucurbita maxima])

HSP 1 Score: 312.8 bits (800), Expect = 2.7e-81
Identity = 149/162 (91.98%), Postives = 155/162 (95.68%), Query Frame = 0


Query: 1   MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGC 60
           M GA+LLA+QPLRVKL  S+NSSTGNPSATA +GNPSLMAAAGPKWAQKTVTLPPHRRGC
Sbjct: 1   MQGAVLLAAQPLRVKLLGSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGC 60

Query: 61  HLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGT 120
           HLITPKI+KEIG DLSEFKCGLAHIFLQHTSASLTINENYD DVRSDTETFLN IVPEGT
Sbjct: 61  HLITPKIMKEIGNDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGT 120

Query: 121 SAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ 163
           SAPWKHTLEGPDDMPAHIKSSMFGCALT+PITNGKFNMGTWQ
Sbjct: 121 SAPWKHTLEGPDDMPAHIKSSMFGCALTVPITNGKFNMGTWQ 162

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BLAST of CmUC11G222870 vs. NCBI nr
Match: XP_008453044.1 (PREDICTED: UPF0047 protein YjbQ [Cucumis melo])

HSP 1 Score: 309.3 bits (791), Expect = 3.0e-80
Identity = 149/162 (91.98%), Postives = 155/162 (95.68%), Query Frame = 0


Query: 1   MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGC 60
           M GAI+LA+QPLRVKL  S+NSSTGNPSATA S NPSLMAAAGPKWAQKTVTL PHRRGC
Sbjct: 1   MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSLMAAAGPKWAQKTVTLSPHRRGC 60

Query: 61  HLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGT 120
           HLITPKI+KEIGQDLSEFKCGLAHIFLQHTSASLTINENYD DV+SDTETFLNKIVPEGT
Sbjct: 61  HLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLNKIVPEGT 120

Query: 121 SAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ 163
           SAPWKHTLEGPDDMPAHIKSS+FGCALTIPITNGKFNMGTWQ
Sbjct: 121 SAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKFNMGTWQ 162

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BLAST of CmUC11G222870 vs. ExPASy Swiss-Prot
Match: O14155 (UPF0047 protein C4A8.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC4A8.02c PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 7.2e-29
Identity = 60/115 (52.17%), Postives = 84/115 (73.04%), Query Frame = 0


Query: 48  QKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSD 107
           Q+ +TL    +G ++IT  ++K++  +L  F  G  + F+QHTSA+LTINEN+D D R+D
Sbjct: 5   QRIITLDRRSKGFYIITNDLVKKL-PELKSFSSGTVNFFIQHTSAALTINENWDADTRAD 64

Query: 108 TETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ 163
               L+KIVPE  SA ++HT EG DDMPAH+KSS+ G +LT+PITNGK ++GTWQ
Sbjct: 65  MNDILDKIVPE--SAGYRHTAEGLDDMPAHVKSSLIGPSLTVPITNGKLSLGTWQ 116

[Close]

BLAST of CmUC11G222870 vs. ExPASy Swiss-Prot
Match: P0AF49 (UPF0047 protein YjbQ OS=Escherichia coli O157:H7 OX=83334 GN=yjbQ PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.3e-26
Identity = 57/117 (48.72%), Postives = 76/117 (64.96%), Query Frame = 0


Query: 46  WAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVR 105
           W QKT+TL    RG HL+T +I+ ++  D+     GL H+ LQHTSASLT+NEN D  VR
Sbjct: 2   WYQKTLTLSAKSRGFHLVTDEILNQLA-DMPRVNIGLLHLLLQHTSASLTLNENCDPTVR 61

Query: 106 SDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ 163
            D E F  + VP+  +  ++H  EG DDMP+HIKSSM G +L +P+  G+   GTWQ
Sbjct: 62  HDMERFFLRTVPD--NGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQ 115

[Close]

BLAST of CmUC11G222870 vs. ExPASy Swiss-Prot
Match: P0AF48 (UPF0047 protein YjbQ OS=Escherichia coli (strain K12) OX=83333 GN=yjbQ PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.3e-26
Identity = 57/117 (48.72%), Postives = 76/117 (64.96%), Query Frame = 0


Query: 46  WAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVR 105
           W QKT+TL    RG HL+T +I+ ++  D+     GL H+ LQHTSASLT+NEN D  VR
Sbjct: 2   WYQKTLTLSAKSRGFHLVTDEILNQLA-DMPRVNIGLLHLLLQHTSASLTLNENCDPTVR 61

Query: 106 SDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ 163
            D E F  + VP+  +  ++H  EG DDMP+HIKSSM G +L +P+  G+   GTWQ
Sbjct: 62  HDMERFFLRTVPD--NGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQ 115

[Close]

BLAST of CmUC11G222870 vs. ExPASy Swiss-Prot
Match: P0A2L2 (UPF0047 protein YjbQ OS=Salmonella typhi OX=90370 GN=yjbQ PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.1e-24
Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 0


Query: 46  WAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVR 105
           W Q+T+TL    RG HLIT +I  ++   L   + GL H+ L HTSASLT+NEN D  VR
Sbjct: 2   WYQRTITLSEKPRGFHLITDEITDKL-SGLPPVETGLLHLLLLHTSASLTLNENCDPTVR 61

Query: 106 SDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ 163
           +D E    K VP+  +A ++H  EG DDMP+HIKSS+ G +L +P+  G+  +GTWQ
Sbjct: 62  ADMERHFLKTVPD--NAAYEHDYEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQ 115

[Close]

BLAST of CmUC11G222870 vs. ExPASy Swiss-Prot
Match: P0A2L1 (UPF0047 protein YjbQ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=yjbQ PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.1e-24
Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 0


Query: 46  WAQKTVTLPPHRRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVR 105
           W Q+T+TL    RG HLIT +I  ++   L   + GL H+ L HTSASLT+NEN D  VR
Sbjct: 2   WYQRTITLSEKPRGFHLITDEITDKL-SGLPPVETGLLHLLLLHTSASLTLNENCDPTVR 61

Query: 106 SDTETFLNKIVPEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ 163
           +D E    K VP+  +A ++H  EG DDMP+HIKSS+ G +L +P+  G+  +GTWQ
Sbjct: 62  ADMERHFLKTVPD--NAAYEHDYEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQ 115

[Close]

BLAST of CmUC11G222870 vs. ExPASy TrEMBL
Match: A0A6J1FDC5 (uncharacterized protein LOC111443082 OS=Cucurbita moschata OX=3662 GN=LOC111443082 PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 3.1e-83
Identity = 150/162 (92.59%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGC 60
           M GA+LLA+QPLRVKL WS+NSSTGNPSATA +GNPSLMAAAGPKWAQKTVTLPPHRRGC
Sbjct: 1   MQGAVLLAAQPLRVKLLWSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGC 60

Query: 61  HLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGT 120
           HLITPKI+KEIG+DLSEFKCGLAHIFLQHTSASLTINENYD DVRSDTETFLN IVPEGT
Sbjct: 61  HLITPKIMKEIGKDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGT 120

Query: 121 SAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ 163
           SAPWKHTLEGPDDMPAHIKSSMFGCALT+PITNGKFNMGTWQ
Sbjct: 121 SAPWKHTLEGPDDMPAHIKSSMFGCALTVPITNGKFNMGTWQ 162

[Close]

BLAST of CmUC11G222870 vs. ExPASy TrEMBL
Match: A0A6J1IIX0 (uncharacterized protein LOC111476694 OS=Cucurbita maxima OX=3661 GN=LOC111476694 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.3e-81
Identity = 149/162 (91.98%), Postives = 155/162 (95.68%), Query Frame = 0


Query: 1   MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGC 60
           M GA+LLA+QPLRVKL  S+NSSTGNPSATA +GNPSLMAAAGPKWAQKTVTLPPHRRGC
Sbjct: 1   MQGAVLLAAQPLRVKLLGSNNSSTGNPSATAGAGNPSLMAAAGPKWAQKTVTLPPHRRGC 60

Query: 61  HLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGT 120
           HLITPKI+KEIG DLSEFKCGLAHIFLQHTSASLTINENYD DVRSDTETFLN IVPEGT
Sbjct: 61  HLITPKIMKEIGNDLSEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNNIVPEGT 120

Query: 121 SAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ 163
           SAPWKHTLEGPDDMPAHIKSSMFGCALT+PITNGKFNMGTWQ
Sbjct: 121 SAPWKHTLEGPDDMPAHIKSSMFGCALTVPITNGKFNMGTWQ 162

[Close]

BLAST of CmUC11G222870 vs. ExPASy TrEMBL
Match: A0A1S3BUP9 (UPF0047 protein YjbQ OS=Cucumis melo OX=3656 GN=LOC103493869 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.4e-80
Identity = 149/162 (91.98%), Postives = 155/162 (95.68%), Query Frame = 0


Query: 1   MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGC 60
           M GAI+LA+QPLRVKL  S+NSSTGNPSATA S NPSLMAAAGPKWAQKTVTL PHRRGC
Sbjct: 1   MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSLMAAAGPKWAQKTVTLSPHRRGC 60

Query: 61  HLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGT 120
           HLITPKI+KEIGQDLSEFKCGLAHIFLQHTSASLTINENYD DV+SDTETFLNKIVPEGT
Sbjct: 61  HLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQSDTETFLNKIVPEGT 120

Query: 121 SAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ 163
           SAPWKHTLEGPDDMPAHIKSS+FGCALTIPITNGKFNMGTWQ
Sbjct: 121 SAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKFNMGTWQ 162

[Close]

BLAST of CmUC11G222870 vs. ExPASy TrEMBL
Match: A0A0A0L4Q6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G665660 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 4.6e-79
Identity = 146/162 (90.12%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MPGAILLASQPLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGC 60
           M GAI+LA+QPLRVKL  S+NSSTGNPSATA S NPS MAAAGPKWAQKTVTL PHRRGC
Sbjct: 1   MQGAIILAAQPLRVKLLRSNNSSTGNPSATAGSSNPSFMAAAGPKWAQKTVTLSPHRRGC 60

Query: 61  HLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGT 120
           HLITPKI+KEIGQDLSEFKCGLAHIFLQHTSASLTINENYD DV++DTETFLNKIVPEGT
Sbjct: 61  HLITPKIMKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDSDVQNDTETFLNKIVPEGT 120

Query: 121 SAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ 163
           SAPWKHTLEGPDDMPAHIKSS+FGCALTIPITNGK NMGTWQ
Sbjct: 121 SAPWKHTLEGPDDMPAHIKSSLFGCALTIPITNGKLNMGTWQ 162

[Close]

BLAST of CmUC11G222870 vs. ExPASy TrEMBL
Match: A0A6J1DDZ9 (uncharacterized protein LOC111019630 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019630 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 3.1e-75
Identity = 143/166 (86.14%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1   MPGAILLA--SQPLRVKL--SWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPH 60
           M GA+LLA  +QP+RVKL  S + N+S+G+PSA+A SG PS MAAAGPKWAQKTVTLPPH
Sbjct: 1   MQGAVLLAVQAQPVRVKLARSINCNTSSGHPSASAGSGTPSQMAAAGPKWAQKTVTLPPH 60

Query: 61  RRGCHLITPKIIKEIGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIV 120
           RRGCHLITPKI+KEIGQDL+EFKCGLAHIFLQHTSASLTINENYD DVRSDTETFLN+IV
Sbjct: 61  RRGCHLITPKIMKEIGQDLAEFKCGLAHIFLQHTSASLTINENYDSDVRSDTETFLNRIV 120

Query: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ 163
           PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNG FNMGTWQ
Sbjct: 121 PEGTSAPWKHTLEGPDDMPAHIKSSMFGCALTIPITNGTFNMGTWQ 166

[Close]

BLAST of CmUC11G222870 vs. TAIR 10
Match: AT1G21065.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink). )

HSP 1 Score: 228.8 bits (582), Expect = 4.7e-60
Identity = 111/152 (73.03%), Postives = 129/152 (84.87%), Query Frame = 0


Query: 11  PLRVKLSWSSNSSTGNPSATARSGNPSLMAAAGPKWAQKTVTLPPHRRGCHLITPKIIKE 70
           PLRV+    S  +  NP AT R+   S+ +++G KWAQKT+TLPP RRGCHLITPKI+KE
Sbjct: 51  PLRVR----SVLTPANP-ATDRA---SMASSSGAKWAQKTITLPPLRRGCHLITPKILKE 110

Query: 71  IGQDLSEFKCGLAHIFLQHTSASLTINENYDLDVRSDTETFLNKIVPEGTSAPWKHTLEG 130
           I +DLS+F CGLAH+FLQHTSASLTINENYD DV++DTETFLN+IVPEG SAPW+HT+EG
Sbjct: 111 IREDLSDFNCGLAHVFLQHTSASLTINENYDPDVQADTETFLNRIVPEGNSAPWRHTMEG 170

Query: 131 PDDMPAHIKSSMFGCALTIPITNGKFNMGTWQ 163
           PDDMPAHIKSSMFGC LTIPIT GK +MGTWQ
Sbjct: 171 PDDMPAHIKSSMFGCQLTIPITKGKLSMGTWQ 194

The following BLAST results are available for this feature:

BLAST of CmUC11G222870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936473.1	6.4e-83	92.59	uncharacterized protein LOC111443082 [Cucurbita moschata] >XP_023521112.1 unchar...	[more]
KAG6591177.1	2.4e-82	91.98	hypothetical protein SDJN03_13523, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038897717.1	5.4e-82	93.21	UPF0047 protein C4A8.02c [Benincasa hispida]	[more]
XP_022976235.1	2.7e-81	91.98	uncharacterized protein LOC111476694 [Cucurbita maxima]	[more]
XP_008453044.1	3.0e-80	91.98	PREDICTED: UPF0047 protein YjbQ [Cucumis melo]	[more]

BLAST of CmUC11G222870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O14155	7.2e-29	52.17	UPF0047 protein C4A8.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ...	[more]
P0AF49	3.3e-26	48.72	UPF0047 protein YjbQ OS=Escherichia coli O157:H7 OX=83334 GN=yjbQ PE=3 SV=1	[more]
P0AF48	3.3e-26	48.72	UPF0047 protein YjbQ OS=Escherichia coli (strain K12) OX=83333 GN=yjbQ PE=3 SV=1	[more]
P0A2L2	3.1e-24	47.86	UPF0047 protein YjbQ OS=Salmonella typhi OX=90370 GN=yjbQ PE=3 SV=1	[more]
P0A2L1	3.1e-24	47.86	UPF0047 protein YjbQ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700...	[more]

BLAST of CmUC11G222870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDC5	3.1e-83	92.59	uncharacterized protein LOC111443082 OS=Cucurbita moschata OX=3662 GN=LOC1114430...	[more]
A0A6J1IIX0	1.3e-81	91.98	uncharacterized protein LOC111476694 OS=Cucurbita maxima OX=3661 GN=LOC111476694...	[more]
A0A1S3BUP9	1.4e-80	91.98	UPF0047 protein YjbQ OS=Cucumis melo OX=3656 GN=LOC103493869 PE=3 SV=1	[more]
A0A0A0L4Q6	4.6e-79	90.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G665660 PE=3 SV=1	[more]
A0A6J1DDZ9	3.1e-75	86.14	uncharacterized protein LOC111019630 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CmUC11G222870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21065.1	4.7e-60	73.03	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035917	YjbQ-like superfamily	GENE3D	2.60.120.460		coord: 40..188 e-value: 9.5E-39 score: 134.4
IPR035917	YjbQ-like superfamily	SUPERFAMILY	111038	YjbQ-like	coord: 46..162
IPR001602	Uncharacterised protein family UPF0047	TIGRFAM	TIGR00149	TIGR00149	coord: 50..162 e-value: 6.9E-31 score: 104.7
IPR001602	Uncharacterised protein family UPF0047	PFAM	PF01894	UPF0047	coord: 63..162 e-value: 1.5E-30 score: 105.7
IPR001602	Uncharacterised protein family UPF0047	PANTHER	PTHR30615	UNCHARACTERIZED PROTEIN YJBQ-RELATED	coord: 27..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..35
None	No IPR available	PANTHER	PTHR30615:SF14	SUBFAMILY NOT NAMED	coord: 27..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC11G222870.1	CmUC11G222870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane