CmUC11G219250 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC11G219250
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	ATP synthase subunit alpha
Location	CmU531Chr11: 27653160 .. 27653387 (-)
RNA-Seq Expression	CmUC11G219250
Synteny	CmUC11G219250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCAACATCGGCTATGGATCACGCCCATCATCATAAGGGCATCTCGATATGGGGTTGGATCATCGGCCCTGGTGATGGCTCCCCTTACTAGTAAAGGAAACAGGAATCGCGGAATTAGACCTGCTATTAACGTCGGCTTATCTGTCAGTCGCGTCGGGTCTGCCGCTCAGTTGAAAGCTATGAATGAGGATTCCTTCAATATCTTTCTTTATTTAAATTTTTAA

mRNA sequence

ATGTTCCAACATCGGCTATGGATCACGCCCATCATCATAAGGGCATCTCGATATGGGGTTGGATCATCGGCCCTGGTGATGGCTCCCCTTACTAGTAAAGGAAACAGGAATCGCGGAATTAGACCTGCTATTAACGTCGGCTTATCTGTCAGTCGCGTCGGGTCTGCCGCTCAGTTGAAAGCTATGAATGAGGATTCCTTCAATATCTTTCTTTATTTAAATTTTTAA

Coding sequence (CDS)

ATGTTCCAACATCGGCTATGGATCACGCCCATCATCATAAGGGCATCTCGATATGGGGTTGGATCATCGGCCCTGGTGATGGCTCCCCTTACTAGTAAAGGAAACAGGAATCGCGGAATTAGACCTGCTATTAACGTCGGCTTATCTGTCAGTCGCGTCGGGTCTGCCGCTCAGTTGAAAGCTATGAATGAGGATTCCTTCAATATCTTTCTTTATTTAAATTTTTAA

Protein sequence

MFQHRLWITPIIIRASRYGVGSSALVMAPLTSKGNRNRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYLNF

Homology

[Close]

BLAST of CmUC11G219250 vs. NCBI nr
Match: GFF64897.1 (hypothetical protein IFM60648_01424 [Aspergillus lentulus] >GFF79568.1 hypothetical protein IFM62136_10097 [Aspergillus lentulus] >GFF96619.1 hypothetical protein IFM47457_10971 [Aspergillus lentulus])

HSP 1 Score: 53.9 bits (128), Expect = 6.9e-04
Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 38  RGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL 74
           RGIRPAINVGLSVSRVGSAAQLKAM + + ++ LYL
Sbjct: 298 RGIRPAINVGLSVSRVGSAAQLKAMKQVAGSLKLYL 333

[Close]

BLAST of CmUC11G219250 vs. NCBI nr
Match: GCB25816.1 (ATP synthase subunit alpha, mitochondrial [Aspergillus awamori])

HSP 1 Score: 53.9 bits (128), Expect = 6.9e-04
Identity = 26/37 (70.27%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 37  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL 74
           NRG+RPAINVGLSVSRVGSAAQ++AM + + ++ LYL
Sbjct: 403 NRGVRPAINVGLSVSRVGSAAQVRAMKQVASSLKLYL 439

[Close]

BLAST of CmUC11G219250 vs. NCBI nr
Match: XP_035352552.1 (ATP synthase F1, alpha subunit [Aspergillus tubingensis] >GAQ47664.1 hypothetical protein AN5084.2 [Aspergillus niger] >GFN11748.1 ATP synthase F1, alpha subunit [Aspergillus tubingensis])

HSP 1 Score: 53.9 bits (128), Expect = 6.9e-04
Identity = 26/37 (70.27%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 37  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL 74
           NRG+RPAINVGLSVSRVGSAAQ++AM + + ++ LYL
Sbjct: 403 NRGVRPAINVGLSVSRVGSAAQVRAMKQVASSLKLYL 439

[Close]

BLAST of CmUC11G219250 vs. NCBI nr
Match: OJI80382.1 (hypothetical protein ASPTUDRAFT_59113 [Aspergillus tubingensis CBS 134.48])

HSP 1 Score: 53.9 bits (128), Expect = 6.9e-04
Identity = 26/37 (70.27%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 37  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL 74
           NRG+RPAINVGLSVSRVGSAAQ++AM + + ++ LYL
Sbjct: 403 NRGVRPAINVGLSVSRVGSAAQVRAMKQVASSLKLYL 439

[Close]

BLAST of CmUC11G219250 vs. NCBI nr
Match: RDK41069.1 (ATP synthase F1, alpha subunit [Aspergillus phoenicis ATCC 13157])

HSP 1 Score: 53.9 bits (128), Expect = 6.9e-04
Identity = 26/37 (70.27%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 37  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL 74
           NRG+RPAINVGLSVSRVGSAAQ++AM + + ++ LYL
Sbjct: 410 NRGVRPAINVGLSVSRVGSAAQVRAMKQVASSLKLYL 446

[Close]

BLAST of CmUC11G219250 vs. ExPASy Swiss-Prot
Match: P37211 (ATP synthase subunit alpha, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=atp-1 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 7.6e-06
Identity = 25/36 (69.44%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 38  RGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL 74
           +G+RPAINVGLSVSRVGSAAQLKAM + + ++ L+L
Sbjct: 400 KGVRPAINVGLSVSRVGSAAQLKAMKQVAGSLKLFL 435

[Close]

BLAST of CmUC11G219250 vs. ExPASy Swiss-Prot
Match: P92549 (ATP synthase subunit alpha, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ATPA PE=1 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 1.0e-05
Identity = 25/27 (92.59%), Postives = 26/27 (96.30%), Query Frame = 0


Query: 38  RGIRPAINVGLSVSRVGSAAQLKAMNE 65
           RGIRPAINVGLSVSRVGSAAQLKAM +
Sbjct: 362 RGIRPAINVGLSVSRVGSAAQLKAMKQ 388

[Close]

BLAST of CmUC11G219250 vs. ExPASy Swiss-Prot
Match: Q06735 (ATP synthase subunit alpha, mitochondrial OS=Beta vulgaris OX=161934 GN=ATPA PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.0e-05
Identity = 25/27 (92.59%), Postives = 26/27 (96.30%), Query Frame = 0


Query: 38  RGIRPAINVGLSVSRVGSAAQLKAMNE 65
           RGIRPAINVGLSVSRVGSAAQLKAM +
Sbjct: 362 RGIRPAINVGLSVSRVGSAAQLKAMKQ 388

[Close]

BLAST of CmUC11G219250 vs. ExPASy Swiss-Prot
Match: P68542 (ATP synthase subunit alpha, mitochondrial OS=Brassica campestris OX=3711 GN=ATPA PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.0e-05
Identity = 25/27 (92.59%), Postives = 26/27 (96.30%), Query Frame = 0


Query: 38  RGIRPAINVGLSVSRVGSAAQLKAMNE 65
           RGIRPAINVGLSVSRVGSAAQLKAM +
Sbjct: 362 RGIRPAINVGLSVSRVGSAAQLKAMKQ 388

[Close]

BLAST of CmUC11G219250 vs. ExPASy Swiss-Prot
Match: P22201 (ATP synthase subunit alpha, mitochondrial OS=Brassica napus OX=3708 GN=ATPA PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.0e-05
Identity = 25/27 (92.59%), Postives = 26/27 (96.30%), Query Frame = 0


Query: 38  RGIRPAINVGLSVSRVGSAAQLKAMNE 65
           RGIRPAINVGLSVSRVGSAAQLKAM +
Sbjct: 362 RGIRPAINVGLSVSRVGSAAQLKAMKQ 388

[Close]

BLAST of CmUC11G219250 vs. ExPASy TrEMBL
Match: A0A370PFU9 (ATP synthase subunit alpha OS=Aspergillus phoenicis ATCC 13157 OX=1353007 GN=M752DRAFT_302627 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.3e-04
Identity = 26/37 (70.27%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 37  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL 74
           NRG+RPAINVGLSVSRVGSAAQ++AM + + ++ LYL
Sbjct: 410 NRGVRPAINVGLSVSRVGSAAQVRAMKQVASSLKLYL 446

[Close]

BLAST of CmUC11G219250 vs. ExPASy TrEMBL
Match: A0A100IUM3 (ATP synthase subunit alpha OS=Aspergillus niger OX=5061 GN=ABL_10325 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.3e-04
Identity = 26/37 (70.27%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 37  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL 74
           NRG+RPAINVGLSVSRVGSAAQ++AM + + ++ LYL
Sbjct: 403 NRGVRPAINVGLSVSRVGSAAQVRAMKQVASSLKLYL 439

[Close]

BLAST of CmUC11G219250 vs. ExPASy TrEMBL
Match: Q5B2Z6 (Uncharacterized protein OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=AN5084.2 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.3e-04
Identity = 27/37 (72.97%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 37  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL 74
           NRGIRPAINVGLSVSRVGSAAQ++AM + + ++ LYL
Sbjct: 517 NRGIRPAINVGLSVSRVGSAAQVRAMKQVAGSLKLYL 553

[Close]

BLAST of CmUC11G219250 vs. ExPASy TrEMBL
Match: C8V7Z2 (ATP synthase subunit alpha OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=ANIA_10626 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.3e-04
Identity = 27/37 (72.97%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 37  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL 74
           NRGIRPAINVGLSVSRVGSAAQ++AM + + ++ LYL
Sbjct: 410 NRGIRPAINVGLSVSRVGSAAQVRAMKQVAGSLKLYL 446

[Close]

BLAST of CmUC11G219250 vs. ExPASy TrEMBL
Match: A0A401L2U7 (ATP synthase subunit alpha OS=Aspergillus awamori OX=105351 GN=AAWM_08701 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.3e-04
Identity = 26/37 (70.27%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 37  NRGIRPAINVGLSVSRVGSAAQLKAMNEDSFNIFLYL 74
           NRG+RPAINVGLSVSRVGSAAQ++AM + + ++ LYL
Sbjct: 403 NRGVRPAINVGLSVSRVGSAAQVRAMKQVASSLKLYL 439

[Close]

BLAST of CmUC11G219250 vs. TAIR 10
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein )

HSP 1 Score: 50.4 bits (119), Expect = 7.1e-07
Identity = 25/27 (92.59%), Postives = 26/27 (96.30%), Query Frame = 0


Query: 38  RGIRPAINVGLSVSRVGSAAQLKAMNE 65
           RGIRPAINVGLSVSRVGSAAQLKAM +
Sbjct: 632 RGIRPAINVGLSVSRVGSAAQLKAMKQ 658

[Close]

BLAST of CmUC11G219250 vs. TAIR 10
Match: ATMG01190.1 (ATP synthase subunit 1 )

HSP 1 Score: 50.4 bits (119), Expect = 7.1e-07
Identity = 25/27 (92.59%), Postives = 26/27 (96.30%), Query Frame = 0


Query: 38  RGIRPAINVGLSVSRVGSAAQLKAMNE 65
           RGIRPAINVGLSVSRVGSAAQLKAM +
Sbjct: 362 RGIRPAINVGLSVSRVGSAAQLKAMKQ 388

[Close]

BLAST of CmUC11G219250 vs. TAIR 10
Match: ATCG00120.1 (ATP synthase subunit alpha )

HSP 1 Score: 48.9 bits (115), Expect = 2.1e-06
Identity = 23/28 (82.14%), Postives = 26/28 (92.86%), Query Frame = 0


Query: 37  NRGIRPAINVGLSVSRVGSAAQLKAMNE 65
           N GIRPAINVG+SVSRVGSAAQ+KAM +
Sbjct: 351 NAGIRPAINVGISVSRVGSAAQIKAMKQ 378

The following BLAST results are available for this feature:

BLAST of CmUC11G219250 vs. NCBI nr


Match Name	E-value	Identity	Description
GFF64897.1	6.9e-04	77.78	hypothetical protein IFM60648_01424 [Aspergillus lentulus] >GFF79568.1 hypotheti...	[more]
GCB25816.1	6.9e-04	70.27	ATP synthase subunit alpha, mitochondrial [Aspergillus awamori]	[more]
XP_035352552.1	6.9e-04	70.27	ATP synthase F1, alpha subunit [Aspergillus tubingensis] >GAQ47664.1 hypothetica...	[more]
OJI80382.1	6.9e-04	70.27	hypothetical protein ASPTUDRAFT_59113 [Aspergillus tubingensis CBS 134.48]	[more]
RDK41069.1	6.9e-04	70.27	ATP synthase F1, alpha subunit [Aspergillus phoenicis ATCC 13157]	[more]

BLAST of CmUC11G219250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P37211	7.6e-06	69.44	ATP synthase subunit alpha, mitochondrial OS=Neurospora crassa (strain ATCC 2469...	[more]
P92549	1.0e-05	92.59	ATP synthase subunit alpha, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ATP...	[more]
Q06735	1.0e-05	92.59	ATP synthase subunit alpha, mitochondrial OS=Beta vulgaris OX=161934 GN=ATPA PE=...	[more]
P68542	1.0e-05	92.59	ATP synthase subunit alpha, mitochondrial OS=Brassica campestris OX=3711 GN=ATPA...	[more]
P22201	1.0e-05	92.59	ATP synthase subunit alpha, mitochondrial OS=Brassica napus OX=3708 GN=ATPA PE=3...	[more]

BLAST of CmUC11G219250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A370PFU9	3.3e-04	70.27	ATP synthase subunit alpha OS=Aspergillus phoenicis ATCC 13157 OX=1353007 GN=M75...	[more]
A0A100IUM3	3.3e-04	70.27	ATP synthase subunit alpha OS=Aspergillus niger OX=5061 GN=ABL_10325 PE=3 SV=1	[more]
Q5B2Z6	3.3e-04	72.97	Uncharacterized protein OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CB...	[more]
C8V7Z2	3.3e-04	72.97	ATP synthase subunit alpha OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /...	[more]
A0A401L2U7	3.3e-04	70.27	ATP synthase subunit alpha OS=Aspergillus awamori OX=105351 GN=AAWM_08701 PE=3 S...	[more]

BLAST of CmUC11G219250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07698.1	7.1e-07	92.59	ATPase, F1 complex, alpha subunit protein	[more]
ATMG01190.1	7.1e-07	92.59	ATP synthase subunit 1	[more]
ATCG00120.1	2.1e-06	82.14	ATP synthase subunit alpha	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.12240		coord: 30..74 e-value: 2.1E-7 score: 32.0
IPR020003	ATPase, alpha/beta subunit, nucleotide-binding domain, active site	PROSITE	PS00152	ATPASE_ALPHA_BETA	coord: 42..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC11G219250.1	CmUC11G219250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0005754	mitochondrial proton-transporting ATP synthase, catalytic core
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism