CmUC11G217380 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC11G217380
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	60S ribosomal protein L17
Location	CmU531Chr11: 25734398 .. 25737175 (+)
RNA-Seq Expression	CmUC11G217380
Synteny	CmUC11G217380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGAAGTGCGTGATCTAATACTTGTTTTTGATTTCTGCTTAGCCTGCAAAGCGCGAGGCTCCGACCTCAGAGTCCATTTCAAGGTAGCTTAGCAACTATATATGTTTTCTCCCTTCATTGTTTTTCTCGTCGATTTCGTTAAAACCGGTCAGTTCTTTGCAAAGTTTATAGGTCTTCAATACGTTGCTCTTTTAATGCATACTTCAGTTAAATCTCTCTCTCAGAGGCCTGGCGTATTGTTTTGAAATTTGCCTCACTGGGAGAAATCATTTGTAAAATTTTTGTGGTTGCTAATTTGTGAATTCTGAGTAATGGCTTGCGCAATATCTTTAATTGTGCGCTGATGTAATGGAACTAGATGTTGTGAATTTGCTGAACATCCAAGACTGCCTTTGAACAACCTGATGAAAAAAGCAGGGCTCTGTTGCCTATTTTGTGAATAGTGCTCTCGTAAACTTCAGGAAAATTGAATGTATCATTATTGGGTGAACCTCTGTATAGATAATAGCTGAAGGTTCAGTAAATGATGCTACATAATCGTTGTAGTTTTGTGTCATAGTATATACTTGGTTGATAATTTTTTGATTGCATATGCAAGATATATTAATTTGCACTAATGTAATTTGATATCATGAATGTGGTGATTATCTTAGATGCCCTGTTATCAACCTAATGAAAAAAGCAGGGTTCTGTTGCCTATTCTGTGAATGGTGCTCTTGTAAATGTCAGGGACACTGATTGTATTGTTATTGGGTGAACCTCTGTGTAGATAATAGCTGAAGGTTCAGTTAATGATGCTACATAATCTTTGTAGTTTTGTGTCATAACTCATAATATATATTTGGTTAATAATTTTTTTATGGCGTATGCAAGACGTATTAATTTGCACTATAATGTTACTTGATATCGTGAATGTGGTGATTTTCTGAGATGTCCTGTTATCAACCTGATGAAAAAAAGCAGGGCTCTGTTGCCTATTTTGTGAATAGTGCTCTCGTAAACATCAGGGAAACTGATTGTATTGTTATTGGGTGAACCTCTGTTGAACTGATTGCTGAAGGTTCAGTAAACGATGCTACATAATCTCTAAAGCATTTTTCATATACCATAATGTAAGTTCGTATTAAGAAAGATAAATGATCCTTAGAGGGCTATTCATTGCTGATGGCCCTTATTTTGTTTAACTCAAAGAACACAGGGTCAATGTTATTAATGATGTATTTTTAAAATAACAATTTGTTAGTAAACAATTCTCTATTATATTATACATAGCATGTGGAAACTGTTATACATTTACTGCATTAGAGTATGATTTTCTGTAACCTGATGAAAAAAGCAGGGCTTTGTTACCTCTTGTGAATAGGGCTCTCGTAAACTTCAGGGAAACTAAGTGCATTGTTATTGGGTGAACCTCTGTAGATCTAGTTGCTTACGGTTCAGTAAATGATGCTACATTTGTAAGATAGCATGATGTTGCAAAAGGTTATATACATAAAAGAATCAAGAGTGACTTTTGTAGATAGAGCATTACATTTTGATACTCGACTATGTTTCATTTGCAAGTGTTCAGATGTTAATGTTGCTTCATTTACTTGGAATTATATGAATGGTCGTTTGTATATTACCTGATAAAAAGCAGGGCTCTCTTACCTTTTGTGAATGGGGTCCTCGTTAAATTCAGGCAAACTGAATGCATTGTTATTGGGTGAACCTCTGTAAAGTTAGTTTCTAAAGGTTCAGTAAATGATGCTACATGAAAATAATATAGCTTAGTGTAACACAAGTGGATCAAAGTTTAAATGTTAACATTCCCATTTTAGATTTTCAAATTGTTTTATTATTAAATTTTCTGTCTCTGGCATAAGGATATTTTTACAAATTTCATGAACTATAGTTTTAAAGGCATGGCTCTGTCAAAGGATTTGATGGTAAAAAATCCTTTTGTCCATGTGTACACATGGATTTTTTTTATGAACTTGACCTCTCTTTTTCATTCCTGTGCAGCGTTATTTACTGTATCCATTATGGTTTTTGTGTTTATGTTTATAGAATACACGAGAGACTGCTCATGCCCTCAGAAAGTTGCCCTTGGCCAAGGCAAAAAGATACTTGGAGGATGTTCTGGCTCACAAGCAGGCTATTCCATTCCGACGTTTCTGTGGAGGTGTTGGACGAACTGCTCAGGCCAAAAATAGGCATTCAAATGGACAAGGACGCTGGCCTGTTAAATCTGCAAAATTTATTCTAGATCTTCTTAAGAATGCTGAGAGTAACGCTGAAGTACGTATTACCACTCATCCTAGTTGCTTTATGGTTCTGTCTTTCAATGTCTCCTTGATTATGACAACGGTTTGACTTCATTCAGGTGAAAGGACTGGACGTTGATTCTCTGATCGTATCCCACATTCAGGTGAACCAAGCTCAAAAGCAAAGGCGTCGTACATACCGTGCTCACGGAAGAATTAACCGTAGGATTCCTAATCTCAAATATAAATCTTATTGTTTCGGTTTAGACCATTGGATTCATTATGGAATTTGATAATTTTGTTTTGCAGCCTATATGTCGTCTCCATGCCACATTGAGCTTATTTTGTCAGAAAAGGAAGAACCTGTCAAGAAAGAGGTAAATTATGGAATTTGATAATTTTAATGGGGACTGTTGTGTGTATGGGCTTCTTCTTGAATTCTTATTTTTCTGTTGGCAGCCTGAGACCCAGTTGGCAACCAGTAAATCCAAGAAATCTCAAGCTCTCCGCAGTGGTGCTTCATCTTGA

mRNA sequence

ATGTTAGAAGTGCGTGATCTAATACTTGTTTTTGATTTCTGCTTAGCCTGCAAAGCGCGAGGCTCCGACCTCAGAGTCCATTTCAAGGGTTCTGTTGCCTATTCTGTGAATGGTGCTCTTGTAAATGTCAGGGACACTGATTATCTAGTTGCTTACGGTTCAGTAAATGATGCTACATTTAATACACGAGAGACTGCTCATGCCCTCAGAAAGTTGCCCTTGGCCAAGGCAAAAAGATACTTGGAGGATGTTCTGGCTCACAAGCAGGCTATTCCATTCCGACGTTTCTGTGGAGGTGTTGGACGAACTGCTCAGGCCAAAAATAGGCATTCAAATGGACAAGGACGCTGGCCTGTTAAATCTGCAAAATTTATTCTAGATCTTCTTAAGAATGCTGAGAGTAACGCTGAAGTGAAAGGACTGGACGTTGATTCTCTGATCGTATCCCACATTCAGGTGAACCAAGCTCAAAAGCAAAGGCGTCGTACATACCGTGCTCACGGAAGAATTAACCCCTATATGTCGTCTCCATGCCACATTGAGCTTATTTTGTCAGAAAAGGAAGAACCTGTCAAGAAAGAGCCTGAGACCCAGTTGGCAACCAGTAAATCCAAGAAATCTCAAGCTCTCCGCAGTGGTGCTTCATCTTGA

Coding sequence (CDS)

ATGTTAGAAGTGCGTGATCTAATACTTGTTTTTGATTTCTGCTTAGCCTGCAAAGCGCGAGGCTCCGACCTCAGAGTCCATTTCAAGGGTTCTGTTGCCTATTCTGTGAATGGTGCTCTTGTAAATGTCAGGGACACTGATTATCTAGTTGCTTACGGTTCAGTAAATGATGCTACATTTAATACACGAGAGACTGCTCATGCCCTCAGAAAGTTGCCCTTGGCCAAGGCAAAAAGATACTTGGAGGATGTTCTGGCTCACAAGCAGGCTATTCCATTCCGACGTTTCTGTGGAGGTGTTGGACGAACTGCTCAGGCCAAAAATAGGCATTCAAATGGACAAGGACGCTGGCCTGTTAAATCTGCAAAATTTATTCTAGATCTTCTTAAGAATGCTGAGAGTAACGCTGAAGTGAAAGGACTGGACGTTGATTCTCTGATCGTATCCCACATTCAGGTGAACCAAGCTCAAAAGCAAAGGCGTCGTACATACCGTGCTCACGGAAGAATTAACCCCTATATGTCGTCTCCATGCCACATTGAGCTTATTTTGTCAGAAAAGGAAGAACCTGTCAAGAAAGAGCCTGAGACCCAGTTGGCAACCAGTAAATCCAAGAAATCTCAAGCTCTCCGCAGTGGTGCTTCATCTTGA

Protein sequence

MLEVRDLILVFDFCLACKARGSDLRVHFKGSVAYSVNGALVNVRDTDYLVAYGSVNDATFNTRETAHALRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKSKKSQALRSGASS

Homology

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BLAST of CmUC11G217380 vs. NCBI nr
Match: XP_008446047.1 (PREDICTED: 60S ribosomal protein L17-2 [Cucumis melo] >XP_011655562.1 60S ribosomal protein L17-2 [Cucumis sativus] >KAA0034200.1 60S ribosomal protein L17-2 [Cucumis melo var. makuwa] >KGN51678.1 hypothetical protein Csa_007731 [Cucumis sativus] >TYK15720.1 60S ribosomal protein L17-2 [Cucumis melo var. makuwa])

HSP 1 Score: 316.2 bits (809), Expect = 2.1e-82
Identity = 169/201 (84.08%), Postives = 170/201 (84.58%), Query Frame = 0


Query: 16  ACKARGSDLRVHFKGSVAYSVNGALVNVRDTDYLVAYGSVNDATFNTRETAHALRKLPLA 75
           +CKARGSDLRVHFK                               NTRETAHALRKLPLA
Sbjct: 14  SCKARGSDLRVHFK-------------------------------NTRETAHALRKLPLA 73

Query: 76  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 135
           KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN
Sbjct: 74  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 133

Query: 136 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 195
           AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP
Sbjct: 134 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 183

Query: 196 ETQLATSKSKKSQALRSGASS 217
           ETQLATSKSKKSQALRSGASS
Sbjct: 194 ETQLATSKSKKSQALRSGASS 183

[Close]

BLAST of CmUC11G217380 vs. NCBI nr
Match: XP_022945920.1 (60S ribosomal protein L17-2 [Cucurbita moschata] >XP_022966986.1 60S ribosomal protein L17-2-like [Cucurbita maxima] >XP_023541703.1 60S ribosomal protein L17-2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.7 bits (805), Expect = 6.2e-82
Identity = 168/201 (83.58%), Postives = 169/201 (84.08%), Query Frame = 0


Query: 16  ACKARGSDLRVHFKGSVAYSVNGALVNVRDTDYLVAYGSVNDATFNTRETAHALRKLPLA 75
           +CKARGSDLRVHFK                               NTRETAHALRKLPLA
Sbjct: 14  SCKARGSDLRVHFK-------------------------------NTRETAHALRKLPLA 73

Query: 76  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 135
           KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN
Sbjct: 74  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 133

Query: 136 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 195
           AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP
Sbjct: 134 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 183

Query: 196 ETQLATSKSKKSQALRSGASS 217
           ETQLATSKSKK QALRSGASS
Sbjct: 194 ETQLATSKSKKGQALRSGASS 183

[Close]

BLAST of CmUC11G217380 vs. NCBI nr
Match: XP_022956721.1 (60S ribosomal protein L17-2-like [Cucurbita moschata] >XP_023549829.1 60S ribosomal protein L17-2-like [Cucurbita pepo subsp. pepo] >KAG6601595.1 60S ribosomal protein L17-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 313.2 bits (801), Expect = 1.8e-81
Identity = 166/201 (82.59%), Postives = 170/201 (84.58%), Query Frame = 0


Query: 16  ACKARGSDLRVHFKGSVAYSVNGALVNVRDTDYLVAYGSVNDATFNTRETAHALRKLPLA 75
           +CKARGSDLRVHFK                               NTRETAHALRKLPLA
Sbjct: 14  SCKARGSDLRVHFK-------------------------------NTRETAHALRKLPLA 73

Query: 76  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 135
           KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLL+NAESN
Sbjct: 74  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLRNAESN 133

Query: 136 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 195
           AEVKGLDVDSLI+SHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEK+EPVKKEP
Sbjct: 134 AEVKGLDVDSLIISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKKEPVKKEP 183

Query: 196 ETQLATSKSKKSQALRSGASS 217
           ETQLATSKSKKSQALRSGASS
Sbjct: 194 ETQLATSKSKKSQALRSGASS 183

[Close]

BLAST of CmUC11G217380 vs. NCBI nr
Match: XP_038891549.1 (60S ribosomal protein L17-2 [Benincasa hispida])

HSP 1 Score: 312.8 bits (800), Expect = 2.4e-81
Identity = 167/201 (83.08%), Postives = 169/201 (84.08%), Query Frame = 0


Query: 16  ACKARGSDLRVHFKGSVAYSVNGALVNVRDTDYLVAYGSVNDATFNTRETAHALRKLPLA 75
           +CKARGSDLRVHFK                               NTRETAHALRKLPLA
Sbjct: 14  SCKARGSDLRVHFK-------------------------------NTRETAHALRKLPLA 73

Query: 76  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 135
           KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN
Sbjct: 74  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 133

Query: 136 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 195
           AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP
Sbjct: 134 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 183

Query: 196 ETQLATSKSKKSQALRSGASS 217
           E QLATSK+KKSQALRSGASS
Sbjct: 194 EIQLATSKAKKSQALRSGASS 183

[Close]

BLAST of CmUC11G217380 vs. NCBI nr
Match: KAF8399943.1 (hypothetical protein HHK36_015815 [Tetracentron sinense])

HSP 1 Score: 311.6 bits (797), Expect = 5.3e-81
Identity = 169/208 (81.25%), Postives = 178/208 (85.58%), Query Frame = 0


Query: 16  ACKARGSDLRVHFKGSVAYSVNGALVNVRDTD-------YLVAYGSVNDATFNTRETAHA 75
           +CKARGSDLRVHFKG + + V   LVN+   D         V +   N  T NTRETAHA
Sbjct: 14  SCKARGSDLRVHFKGYMFFMVL-LLVNLCGNDDKIRCVLLSVIFKEANLDT-NTRETAHA 73

Query: 76  LRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDL 135
           +RKLPLAKAKRYLEDVL HKQAIPFRRFC GVGRTAQAKNRHSNGQGRWPVKSAKFILDL
Sbjct: 74  IRKLPLAKAKRYLEDVLVHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDL 133

Query: 136 LKNAESNAEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKE 195
           LKNAESNA+VKGLDVDSL VSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKE
Sbjct: 134 LKNAESNADVKGLDVDSLYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKE 193

Query: 196 EPVKKEPETQLATSKSKKSQALRSGASS 217
           EPVKKEPETQLA  K+KK+QALRSGASS
Sbjct: 194 EPVKKEPETQLAPRKTKKAQALRSGASS 219

[Close]

BLAST of CmUC11G217380 vs. ExPASy Swiss-Prot
Match: P51413 (60S ribosomal protein L17-2 OS=Arabidopsis thaliana OX=3702 GN=RPL17B PE=2 SV=2)

HSP 1 Score: 276.9 bits (707), Expect = 1.9e-73
Identity = 146/194 (75.26%), Postives = 155/194 (79.90%), Query Frame = 0


Query: 16  ACKARGSDLRVHFKGSVAYSVNGALVNVRDTDYLVAYGSVNDATFNTRETAHALRKLPLA 75
           +CKARGSDLRVHFK                               NTRETAHA+RKLPL 
Sbjct: 14  SCKARGSDLRVHFK-------------------------------NTRETAHAIRKLPLI 73

Query: 76  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 135
           KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESN
Sbjct: 74  KAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESN 133

Query: 136 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 195
           AEVKGLDVD+L +SHIQVNQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEP
Sbjct: 134 AEVKGLDVDALFISHIQVNQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEP 175

Query: 196 ETQLATSKSKKSQA 210
           ETQLA +KSKKS A
Sbjct: 194 ETQLA-AKSKKSAA 175

[Close]

BLAST of CmUC11G217380 vs. ExPASy Swiss-Prot
Match: Q93VI3 (60S ribosomal protein L17-1 OS=Arabidopsis thaliana OX=3702 GN=RPL17A PE=2 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.6e-72
Identity = 147/201 (73.13%), Postives = 157/201 (78.11%), Query Frame = 0


Query: 16  ACKARGSDLRVHFKGSVAYSVNGALVNVRDTDYLVAYGSVNDATFNTRETAHALRKLPLA 75
           +CKARG+DLRVHFK                               NTRETAHA+RKLPL 
Sbjct: 14  SCKARGADLRVHFK-------------------------------NTRETAHAIRKLPLN 73

Query: 76  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 135
           KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESN
Sbjct: 74  KAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESN 133

Query: 136 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 195
           AEVKGLDVD+L +SHIQVNQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEP
Sbjct: 134 AEVKGLDVDALFISHIQVNQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEP 176

Query: 196 ETQLATSKSKKSQALRSGASS 217
           ETQLA +KSKK      GASS
Sbjct: 194 ETQLA-AKSKK------GASS 176

[Close]

BLAST of CmUC11G217380 vs. ExPASy Swiss-Prot
Match: O48557 (60S ribosomal protein L17 OS=Zea mays OX=4577 GN=RPL17 PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.1e-68
Identity = 137/188 (72.87%), Postives = 146/188 (77.66%), Query Frame = 0


Query: 16  ACKARGSDLRVHFKGSVAYSVNGALVNVRDTDYLVAYGSVNDATFNTRETAHALRKLPLA 75
           + KA G DLRVHFK                               NTRETA ALRKLPL 
Sbjct: 14  SAKAMGRDLRVHFK-------------------------------NTRETAFALRKLPLT 73

Query: 76  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 135
           KAKRYLEDV+AHKQAIPFRR+CGGVGRTAQAK+RHSNGQGRWPVKSA+FILDLLKNAESN
Sbjct: 74  KAKRYLEDVIAHKQAIPFRRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESN 133

Query: 136 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 195
           A+VKGLDVD+L VSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKE 
Sbjct: 134 ADVKGLDVDNLYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEA 170

Query: 196 ETQLATSK 204
           +  +A  K
Sbjct: 194 DNIVAARK 170

[Close]

BLAST of CmUC11G217380 vs. ExPASy Swiss-Prot
Match: P35266 (60S ribosomal protein L17-1 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.7e-66
Identity = 132/185 (71.35%), Postives = 141/185 (76.22%), Query Frame = 0


Query: 16  ACKARGSDLRVHFKGSVAYSVNGALVNVRDTDYLVAYGSVNDATFNTRETAHALRKLPLA 75
           + KA G DLRVHFK                               NTRETA ALRK+PL 
Sbjct: 14  SAKAMGRDLRVHFK-------------------------------NTRETAFALRKMPLN 73

Query: 76  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 135
           KAKRYLEDVLAHKQAIPFRR+C GVGRTAQ KNR  NGQGRWP KSAKF+LDLLKNAESN
Sbjct: 74  KAKRYLEDVLAHKQAIPFRRYCRGVGRTAQVKNRQPNGQGRWPAKSAKFVLDLLKNAESN 133

Query: 136 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 195
           AEVKGLDVD+L +SHIQVNQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKE 
Sbjct: 134 AEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEA 167

Query: 196 ETQLA 201
           E+ +A
Sbjct: 194 ESHIA 167

[Close]

BLAST of CmUC11G217380 vs. ExPASy Swiss-Prot
Match: P35267 (60S ribosomal protein L17-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 4.2e-65
Identity = 130/189 (68.78%), Postives = 142/189 (75.13%), Query Frame = 0


Query: 16  ACKARGSDLRVHFKGSVAYSVNGALVNVRDTDYLVAYGSVNDATFNTRETAHALRKLPLA 75
           + KA G DLRVHFK                               NTRETA ALR++PL 
Sbjct: 14  SAKACGKDLRVHFK-------------------------------NTRETAFALRRMPLG 73

Query: 76  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 135
           KAKRYLEDVLAHKQAIPFRR+C GVGRTAQ KNR  NGQGRWP KSA+F+LDLLKNAESN
Sbjct: 74  KAKRYLEDVLAHKQAIPFRRYCRGVGRTAQVKNRQPNGQGRWPAKSAQFVLDLLKNAESN 133

Query: 136 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 195
           AEVKGLDVD+L +SHIQVNQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKE 
Sbjct: 134 AEVKGLDVDNLYISHIQVNQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEA 171

Query: 196 ETQLATSKS 205
           +  +A  K+
Sbjct: 194 DNVVAPRKA 171

[Close]

BLAST of CmUC11G217380 vs. ExPASy TrEMBL
Match: A0A5A7STA3 (60S ribosomal protein L17-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002190 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.0e-82
Identity = 169/201 (84.08%), Postives = 170/201 (84.58%), Query Frame = 0


Query: 16  ACKARGSDLRVHFKGSVAYSVNGALVNVRDTDYLVAYGSVNDATFNTRETAHALRKLPLA 75
           +CKARGSDLRVHFK                               NTRETAHALRKLPLA
Sbjct: 14  SCKARGSDLRVHFK-------------------------------NTRETAHALRKLPLA 73

Query: 76  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 135
           KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN
Sbjct: 74  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 133

Query: 136 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 195
           AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP
Sbjct: 134 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 183

Query: 196 ETQLATSKSKKSQALRSGASS 217
           ETQLATSKSKKSQALRSGASS
Sbjct: 194 ETQLATSKSKKSQALRSGASS 183

[Close]

BLAST of CmUC11G217380 vs. ExPASy TrEMBL
Match: A0A0A0KPZ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589950 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.0e-82
Identity = 169/201 (84.08%), Postives = 170/201 (84.58%), Query Frame = 0


Query: 16  ACKARGSDLRVHFKGSVAYSVNGALVNVRDTDYLVAYGSVNDATFNTRETAHALRKLPLA 75
           +CKARGSDLRVHFK                               NTRETAHALRKLPLA
Sbjct: 14  SCKARGSDLRVHFK-------------------------------NTRETAHALRKLPLA 73

Query: 76  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 135
           KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN
Sbjct: 74  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 133

Query: 136 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 195
           AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP
Sbjct: 134 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 183

Query: 196 ETQLATSKSKKSQALRSGASS 217
           ETQLATSKSKKSQALRSGASS
Sbjct: 194 ETQLATSKSKKSQALRSGASS 183

[Close]

BLAST of CmUC11G217380 vs. ExPASy TrEMBL
Match: A0A1S3BDN4 (60S ribosomal protein L17-2 OS=Cucumis melo OX=3656 GN=LOC103488896 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.0e-82
Identity = 169/201 (84.08%), Postives = 170/201 (84.58%), Query Frame = 0


Query: 16  ACKARGSDLRVHFKGSVAYSVNGALVNVRDTDYLVAYGSVNDATFNTRETAHALRKLPLA 75
           +CKARGSDLRVHFK                               NTRETAHALRKLPLA
Sbjct: 14  SCKARGSDLRVHFK-------------------------------NTRETAHALRKLPLA 73

Query: 76  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 135
           KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN
Sbjct: 74  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 133

Query: 136 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 195
           AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP
Sbjct: 134 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 183

Query: 196 ETQLATSKSKKSQALRSGASS 217
           ETQLATSKSKKSQALRSGASS
Sbjct: 194 ETQLATSKSKKSQALRSGASS 183

[Close]

BLAST of CmUC11G217380 vs. ExPASy TrEMBL
Match: A0A6J1HQT9 (60S ribosomal protein L17-2-like OS=Cucurbita maxima OX=3661 GN=LOC111466530 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 3.0e-82
Identity = 168/201 (83.58%), Postives = 169/201 (84.08%), Query Frame = 0


Query: 16  ACKARGSDLRVHFKGSVAYSVNGALVNVRDTDYLVAYGSVNDATFNTRETAHALRKLPLA 75
           +CKARGSDLRVHFK                               NTRETAHALRKLPLA
Sbjct: 14  SCKARGSDLRVHFK-------------------------------NTRETAHALRKLPLA 73

Query: 76  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 135
           KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN
Sbjct: 74  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 133

Query: 136 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 195
           AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP
Sbjct: 134 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 183

Query: 196 ETQLATSKSKKSQALRSGASS 217
           ETQLATSKSKK QALRSGASS
Sbjct: 194 ETQLATSKSKKGQALRSGASS 183

[Close]

BLAST of CmUC11G217380 vs. ExPASy TrEMBL
Match: A0A6J1G2C7 (60S ribosomal protein L17-2 OS=Cucurbita moschata OX=3662 GN=LOC111450019 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 3.0e-82
Identity = 168/201 (83.58%), Postives = 169/201 (84.08%), Query Frame = 0


Query: 16  ACKARGSDLRVHFKGSVAYSVNGALVNVRDTDYLVAYGSVNDATFNTRETAHALRKLPLA 75
           +CKARGSDLRVHFK                               NTRETAHALRKLPLA
Sbjct: 14  SCKARGSDLRVHFK-------------------------------NTRETAHALRKLPLA 73

Query: 76  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 135
           KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN
Sbjct: 74  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 133

Query: 136 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 195
           AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP
Sbjct: 134 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 183

Query: 196 ETQLATSKSKKSQALRSGASS 217
           ETQLATSKSKK QALRSGASS
Sbjct: 194 ETQLATSKSKKGQALRSGASS 183

[Close]

BLAST of CmUC11G217380 vs. TAIR 10
Match: AT1G67430.1 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 276.9 bits (707), Expect = 1.3e-74
Identity = 146/194 (75.26%), Postives = 155/194 (79.90%), Query Frame = 0


Query: 16  ACKARGSDLRVHFKGSVAYSVNGALVNVRDTDYLVAYGSVNDATFNTRETAHALRKLPLA 75
           +CKARGSDLRVHFK                               NTRETAHA+RKLPL 
Sbjct: 14  SCKARGSDLRVHFK-------------------------------NTRETAHAIRKLPLI 73

Query: 76  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 135
           KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESN
Sbjct: 74  KAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESN 133

Query: 136 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 195
           AEVKGLDVD+L +SHIQVNQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEP
Sbjct: 134 AEVKGLDVDALFISHIQVNQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEP 175

Query: 196 ETQLATSKSKKSQA 210
           ETQLA +KSKKS A
Sbjct: 194 ETQLA-AKSKKSAA 175

[Close]

BLAST of CmUC11G217380 vs. TAIR 10
Match: AT1G27400.1 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 272.7 bits (696), Expect = 2.5e-73
Identity = 147/201 (73.13%), Postives = 157/201 (78.11%), Query Frame = 0


Query: 16  ACKARGSDLRVHFKGSVAYSVNGALVNVRDTDYLVAYGSVNDATFNTRETAHALRKLPLA 75
           +CKARG+DLRVHFK                               NTRETAHA+RKLPL 
Sbjct: 14  SCKARGADLRVHFK-------------------------------NTRETAHAIRKLPLN 73

Query: 76  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 135
           KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESN
Sbjct: 74  KAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESN 133

Query: 136 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 195
           AEVKGLDVD+L +SHIQVNQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEP
Sbjct: 134 AEVKGLDVDALFISHIQVNQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEP 176

Query: 196 ETQLATSKSKKSQALRSGASS 217
           ETQLA +KSKK      GASS
Sbjct: 194 ETQLA-AKSKK------GASS 176

[Close]

BLAST of CmUC11G217380 vs. TAIR 10
Match: AT1G67430.2 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-43
Identity = 107/194 (55.15%), Postives = 113/194 (58.25%), Query Frame = 0


Query: 16  ACKARGSDLRVHFKGSVAYSVNGALVNVRDTDYLVAYGSVNDATFNTRETAHALRKLPLA 75
           +CKARGSDLRVHFK                               NTRETAHA+RKLPL 
Sbjct: 14  SCKARGSDLRVHFK-------------------------------NTRETAHAIRKLPLI 73

Query: 76  KAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESN 135
           KAKRYLEDV+AHKQAIPF RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESN
Sbjct: 74  KAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESN 131

Query: 136 AEVKGLDVDSLIVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEP 195
           A                                            ELILSEKEEPVKKEP
Sbjct: 134 A--------------------------------------------ELILSEKEEPVKKEP 131

Query: 196 ETQLATSKSKKSQA 210
           ETQLA +KSKKS A
Sbjct: 194 ETQLA-AKSKKSAA 131

The following BLAST results are available for this feature:

BLAST of CmUC11G217380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446047.1	2.1e-82	84.08	PREDICTED: 60S ribosomal protein L17-2 [Cucumis melo] >XP_011655562.1 60S riboso...	[more]
XP_022945920.1	6.2e-82	83.58	60S ribosomal protein L17-2 [Cucurbita moschata] >XP_022966986.1 60S ribosomal p...	[more]
XP_022956721.1	1.8e-81	82.59	60S ribosomal protein L17-2-like [Cucurbita moschata] >XP_023549829.1 60S riboso...	[more]
XP_038891549.1	2.4e-81	83.08	60S ribosomal protein L17-2 [Benincasa hispida]	[more]
KAF8399943.1	5.3e-81	81.25	hypothetical protein HHK36_015815 [Tetracentron sinense]	[more]

BLAST of CmUC11G217380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P51413	1.9e-73	75.26	60S ribosomal protein L17-2 OS=Arabidopsis thaliana OX=3702 GN=RPL17B PE=2 SV=2	[more]
Q93VI3	3.6e-72	73.13	60S ribosomal protein L17-1 OS=Arabidopsis thaliana OX=3702 GN=RPL17A PE=2 SV=1	[more]
O48557	1.1e-68	72.87	60S ribosomal protein L17 OS=Zea mays OX=4577 GN=RPL17 PE=2 SV=1	[more]
P35266	1.7e-66	71.35	60S ribosomal protein L17-1 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
P35267	4.2e-65	68.78	60S ribosomal protein L17-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]

BLAST of CmUC11G217380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7STA3	1.0e-82	84.08	60S ribosomal protein L17-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A0A0KPZ4	1.0e-82	84.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589950 PE=3 SV=1	[more]
A0A1S3BDN4	1.0e-82	84.08	60S ribosomal protein L17-2 OS=Cucumis melo OX=3656 GN=LOC103488896 PE=3 SV=1	[more]
A0A6J1HQT9	3.0e-82	83.58	60S ribosomal protein L17-2-like OS=Cucurbita maxima OX=3661 GN=LOC111466530 PE=...	[more]
A0A6J1G2C7	3.0e-82	83.58	60S ribosomal protein L17-2 OS=Cucurbita moschata OX=3662 GN=LOC111450019 PE=3 S...	[more]

BLAST of CmUC11G217380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67430.1	1.3e-74	75.26	Ribosomal protein L22p/L17e family protein	[more]
AT1G27400.1	2.5e-73	73.13	Ribosomal protein L22p/L17e family protein	[more]
AT1G67430.2	1.6e-43	55.15	Ribosomal protein L22p/L17e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005721	Ribosomal protein L22/L17, eukaryotic/archaeal	TIGRFAM	TIGR01038	TIGR01038	coord: 61..187 e-value: 2.1E-50 score: 168.5
IPR005721	Ribosomal protein L22/L17, eukaryotic/archaeal	PANTHER	PTHR11593	60S RIBOSOMAL PROTEIN L17	coord: 60..216
IPR036394	Ribosomal protein L22/L17 superfamily	GENE3D	3.90.470.10	Ribosomal protein L22/L17	coord: 51..215 e-value: 4.2E-64 score: 217.5
IPR036394	Ribosomal protein L22/L17 superfamily	SUPERFAMILY	54843	Ribosomal protein L22	coord: 58..187
IPR001063	Ribosomal protein L22/L17	PFAM	PF00237	Ribosomal_L22	coord: 61..185 e-value: 4.6E-34 score: 116.8
IPR001063	Ribosomal protein L22/L17	CDD	cd00336	Ribosomal_L22	coord: 17..184 e-value: 8.11626E-31 score: 107.191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..216
None	No IPR available	PANTHER	PTHR11593:SF35	60S RIBOSOMAL PROTEIN L17-2-LIKE	coord: 60..216
IPR018260	Ribosomal protein L22/L17, conserved site	PROSITE	PS00464	RIBOSOMAL_L22	coord: 160..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC11G217380.1	CmUC11G217380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome