CmUC11G216580 (gene) Watermelon (USVL531) v1

Overview
NameCmUC11G216580
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionTranscription termination factor MTERF5
LocationCmU531Chr11: 24985258 .. 24986343 (-)
RNA-Seq ExpressionCmUC11G216580
SyntenyCmUC11G216580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAAAATTTCTTCCACATTTCTTCTTTATTTCATCCAAAAACGTTTCGTCAATACGGTTTCTAGTTCGACATTGCCATTAGCGTCTGTCTCTACGATCGAATTCCTCAAAAATTCTTGTGGGCTTGCCTGTCGAAAGCTCCTAACTGATGAAAAAAACCCCCAAAAGTACGAAGCCATTATCAGTTTCTTCAAATCGTATGGATTCGAGAATTCGCAGATCGCCAAGTTGGTTTCGTTGCGACCTGCTATCCTTCATTCGAGAGTATCCAAGAATCTGAAGCCTAAATTTGAGTTCCTCGAGGAAATTGGGATCGTGGGTCCTTTACTTCCTAAGGTAATTCTATGGAACCCTACGATTCTGTCCAGGAGCTTAAATTATCAGTTGAAACCATCATTTTGTTTCATAAAGGAAATGCTTGAATCGAAAGAGAATGTAATAGCTGCTATTCGTCGTGCTTCATGGCTTCTAACTTTTGATTTTAAGGGTATTATGCAACCAAACATTGATGTTTTGGTCGGTGAAGGGGTACCTTCTAGGAATATAACGAAATTGATTGTACTGCAGCCTAGAACTATTATGCGAAAGGTTGATAGAATGGTTTATGCAGTGAAAGCAGTCAAGGAATTGGGCTTTGAACCAAAGGCTGGCATGTTTGTTCATGCACTTAGAGTAATGGTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTTGGATTGTCTGAGAAAGAGATTTTAACAGCATTTAAGAGAGAACCACATTGTTTAGCTTGTTCAGAGGAGAAAATGAGAGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGACCCAGGAACTTTAATTTCTTACCCTAAGTTCTTCAGGTATGGACTCAACAAGCGGCTCTGGCCGAGGTACAAAGTTCTCGAGGTTTTGAAGGTGAAAAATCTTATTAAGAAGAATAAAAAGATTGCTCAGTTGTTTATGCTAGAGGAGCGAAGTTTTGTGGAGAATTATGTTCTTAAGCATTTGGATGAAATCCCAGATCTTATGGACATATACCGCGGCAATGCCGCAGCCTAA

mRNA sequence

ATGTCTAAAATTTCTTCCACATTTCTTCTTTATTTCATCCAAAAACGTTTCGTCAATACGGTTTCTAGTTCGACATTGCCATTAGCGTCTGTCTCTACGATCGAATTCCTCAAAAATTCTTGTGGGCTTGCCTGTCGAAAGCTCCTAACTGATGAAAAAAACCCCCAAAAGTACGAAGCCATTATCAGTTTCTTCAAATCGTATGGATTCGAGAATTCGCAGATCGCCAAGTTGGTTTCGTTGCGACCTGCTATCCTTCATTCGAGAGTATCCAAGAATCTGAAGCCTAAATTTGAGTTCCTCGAGGAAATTGGGATCGTGGGTCCTTTACTTCCTAAGGTAATTCTATGGAACCCTACGATTCTGTCCAGGAGCTTAAATTATCAGTTGAAACCATCATTTTGTTTCATAAAGGAAATGCTTGAATCGAAAGAGAATGTAATAGCTGCTATTCGTCGTGCTTCATGGCTTCTAACTTTTGATTTTAAGGGTATTATGCAACCAAACATTGATGTTTTGGTCGGTGAAGGGGTACCTTCTAGGAATATAACGAAATTGATTGTACTGCAGCCTAGAACTATTATGCGAAAGGTTGATAGAATGGTTTATGCAGTGAAAGCAGTCAAGGAATTGGGCTTTGAACCAAAGGCTGGCATGTTTGTTCATGCACTTAGAGTAATGGTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTTGGATTGTCTGAGAAAGAGATTTTAACAGCATTTAAGAGAGAACCACATTGTTTAGCTTGTTCAGAGGAGAAAATGAGAGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGACCCAGGAACTTTAATTTCTTACCCTAAGTTCTTCAGGTATGGACTCAACAAGCGGCTCTGGCCGAGGTACAAAGTTCTCGAGGTTTTGAAGGTGAAAAATCTTATTAAGAAGAATAAAAAGATTGCTCAGTTGTTTATGCTAGAGGAGCGAAGTTTTGTGGAGAATTATGTTCTTAAGCATTTGGATGAAATCCCAGATCTTATGGACATATACCGCGGCAATGCCGCAGCCTAA

Coding sequence (CDS)

ATGTCTAAAATTTCTTCCACATTTCTTCTTTATTTCATCCAAAAACGTTTCGTCAATACGGTTTCTAGTTCGACATTGCCATTAGCGTCTGTCTCTACGATCGAATTCCTCAAAAATTCTTGTGGGCTTGCCTGTCGAAAGCTCCTAACTGATGAAAAAAACCCCCAAAAGTACGAAGCCATTATCAGTTTCTTCAAATCGTATGGATTCGAGAATTCGCAGATCGCCAAGTTGGTTTCGTTGCGACCTGCTATCCTTCATTCGAGAGTATCCAAGAATCTGAAGCCTAAATTTGAGTTCCTCGAGGAAATTGGGATCGTGGGTCCTTTACTTCCTAAGGTAATTCTATGGAACCCTACGATTCTGTCCAGGAGCTTAAATTATCAGTTGAAACCATCATTTTGTTTCATAAAGGAAATGCTTGAATCGAAAGAGAATGTAATAGCTGCTATTCGTCGTGCTTCATGGCTTCTAACTTTTGATTTTAAGGGTATTATGCAACCAAACATTGATGTTTTGGTCGGTGAAGGGGTACCTTCTAGGAATATAACGAAATTGATTGTACTGCAGCCTAGAACTATTATGCGAAAGGTTGATAGAATGGTTTATGCAGTGAAAGCAGTCAAGGAATTGGGCTTTGAACCAAAGGCTGGCATGTTTGTTCATGCACTTAGAGTAATGGTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTTGGATTGTCTGAGAAAGAGATTTTAACAGCATTTAAGAGAGAACCACATTGTTTAGCTTGTTCAGAGGAGAAAATGAGAGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGACCCAGGAACTTTAATTTCTTACCCTAAGTTCTTCAGGTATGGACTCAACAAGCGGCTCTGGCCGAGGTACAAAGTTCTCGAGGTTTTGAAGGTGAAAAATCTTATTAAGAAGAATAAAAAGATTGCTCAGTTGTTTATGCTAGAGGAGCGAAGTTTTGTGGAGAATTATGTTCTTAAGCATTTGGATGAAATCCCAGATCTTATGGACATATACCGCGGCAATGCCGCAGCCTAA

Protein sequence

MSKISSTFLLYFIQKRFVNTVSSSTLPLASVSTIEFLKNSCGLACRKLLTDEKNPQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPKVILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVLVGEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDSTWKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPKFFRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKHLDEIPDLMDIYRGNAAA
Homology
[Close]
BLAST of CmUC11G216580 vs. NCBI nr
Match: XP_038876362.1 (transcription termination factor MTERF5, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 559.3 bits (1440), Expect = 2.4e-155
Identity = 290/361 (80.33%), Postives = 311/361 (86.15%), Query Frame = 0 

Query: 1   MSKISSTFLLYFIQKRFVNTVSSSTLPLASVSTIEFLKNSCGLACRKLLTDEKNPQKYEA 60
           MSKISSTFLLYFIQKRF+NTVSSSTLPL SVSTIEFLKNSCGLAC+ L  DEKN  KYEA
Sbjct: 1   MSKISSTFLLYFIQKRFLNTVSSSTLPLPSVSTIEFLKNSCGLACQTLQIDEKNSHKYEA 60

Query: 61  IISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPKVILWNPT 120
           II FFKS+GF+NSQIAKLVS RP +L SRVS NLKPKFEFLEEIGIVGPLLPKVIL NP 
Sbjct: 61  IIGFFKSHGFDNSQIAKLVSTRPWVLRSRVSNNLKPKFEFLEEIGIVGPLLPKVILSNPR 120

Query: 121 ILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVLVGEGVPS 180
           IL  SL+ QLKPSFCFIK +LES E V  AI R+SWLLT DFKG MQ NI+VLV EGV S
Sbjct: 121 ILQTSLDSQLKPSFCFIKGILESDEQVTFAICRSSWLLTADFKGTMQSNINVLVREGVSS 180

Query: 181 RNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDSTWKKKIN 240
           RNI KLIVLQPR IM+KVDRMVYAVK VKELG EP A MFVHA+RVMVSMNDSTWKKKIN
Sbjct: 181 RNIAKLIVLQPRAIMQKVDRMVYAVKTVKELGIEPNAHMFVHAVRVMVSMNDSTWKKKIN 240

Query: 241 VLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPKFFRYGLN 300
           VLKS G SEKEI  AFKR+P CL CSEEKMRDVADFCFNTAKLDPGT+ISYPKFF   L+
Sbjct: 241 VLKSLGWSEKEIFAAFKRDPLCLVCSEEKMRDVADFCFNTAKLDPGTVISYPKFFMCALD 300

Query: 301 KRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKHLDEIPDLMDIYRGNAA 360
           KRL PRYKV+EVLK KNL+KKNKKIA + +  ER+FVENYVLKHLD+IP LMD+YRGN A
Sbjct: 301 KRLRPRYKVVEVLKAKNLLKKNKKIAWVLLQGERNFVENYVLKHLDDIPYLMDMYRGNVA 360

Query: 361 A 362
           A
Sbjct: 361 A 361

[Close]
BLAST of CmUC11G216580 vs. NCBI nr
Match: XP_023529167.1 (transcription termination factor MTERF5, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 544.3 bits (1401), Expect = 8.1e-151
Identity = 283/368 (76.90%), Postives = 315/368 (85.60%), Query Frame = 0 

Query: 1   MSKISSTFLLYFIQKRFVNTVSSSTLPLASVSTIEFLKNSCGL-------ACRKLLTDEK 60
           MSKISSTFLLYFIQ RF+NT+S STLPLASVSTIEFLKNSCGL       A RKL  DEK
Sbjct: 1   MSKISSTFLLYFIQNRFINTISGSTLPLASVSTIEFLKNSCGLATDSPSSALRKLQFDEK 60

Query: 61  NPQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPK 120
           + +KYEA+  F KSYGFENSQIAKL++ RP+IL SRVS NLKPKFEFLEEIG VGPLLPK
Sbjct: 61  SAKKYEAVPRFLKSYGFENSQIAKLIAKRPSILQSRVSSNLKPKFEFLEEIGFVGPLLPK 120

Query: 121 VILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVL 180
           VIL NPTIL R L+ QLKPSFCFIKEMLES E    AIRR+SWLLTFDFKG+MQ N++VL
Sbjct: 121 VILSNPTILQRGLDSQLKPSFCFIKEMLESDEQANFAIRRSSWLLTFDFKGVMQSNVNVL 180

Query: 181 VGEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDS 240
           +GEGVPSRNI+KLI  QPRTIM+KVDRMV AVK VKELG EP+  MFV ALRV++SMND+
Sbjct: 181 LGEGVPSRNISKLIGQQPRTIMQKVDRMVCAVKKVKELGIEPQTRMFVRALRVVLSMNDT 240

Query: 241 TWKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
           TWKKKINV KS G SEKEILTAFKR+P+CLACSEEKMR VADFCFN AKLDP T+ISYP 
Sbjct: 241 TWKKKINVFKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCFNAAKLDPETVISYPT 300

Query: 301 FFRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKHLDEIPDLMD 360
           FF  GL+KRL PR+KV+EVLKVK LI +N+KIA+L +L ER FV+NYVLKHLDE+PDLMD
Sbjct: 301 FFMSGLDKRLRPRFKVVEVLKVKKLI-ENRKIARLLVLGERIFVKNYVLKHLDEVPDLMD 360

Query: 361 IYRGNAAA 362
           IYRGNAAA
Sbjct: 361 IYRGNAAA 367

[Close]
BLAST of CmUC11G216580 vs. NCBI nr
Match: XP_038892570.1 (transcription termination factor MTERF9, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 541.2 bits (1393), Expect = 6.8e-150
Identity = 284/361 (78.67%), Postives = 306/361 (84.76%), Query Frame = 0 

Query: 1   MSKISSTFLLYFIQKRFVNTVSSSTLPLASVSTIEFLKNSCGLACRKLLTDEKNPQKYEA 60
           M KISSTFLLYFIQKRF++TVSSST+PL  VSTIEFLKNSCGLAC+ L  DEKN  KYEA
Sbjct: 31  MCKISSTFLLYFIQKRFLSTVSSSTIPLPFVSTIEFLKNSCGLACQTLQIDEKNSHKYEA 90

Query: 61  IISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPKVILWNPT 120
           II FF+S+GF+NSQIA LVS RP+IL SRVS NLKPK EFLEEIGIVGPLLPKVIL NP 
Sbjct: 91  IIGFFRSHGFDNSQIANLVSRRPSILQSRVSDNLKPKLEFLEEIGIVGPLLPKVILSNPR 150

Query: 121 ILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVLVGEGVPS 180
           IL  SL+ QLKPSFCFIK MLES E V  AI R+SWLLT DFKGIMQ NI+VLV EGV S
Sbjct: 151 ILQTSLDSQLKPSFCFIKRMLESDEQVTFAICRSSWLLTADFKGIMQSNINVLVSEGVSS 210

Query: 181 RNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDSTWKKKIN 240
           RNI KLIVLQPR IM+ VDRMVYAVK VKELG EP A MFV+A++VMVSM DSTWKKKIN
Sbjct: 211 RNIAKLIVLQPRAIMQMVDRMVYAVKTVKELGIEPNAHMFVYAVKVMVSMKDSTWKKKIN 270

Query: 241 VLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPKFFRYGLN 300
           VLKS G SEKEI  AFKREP CLA SEEKMRDVADFC NTAKLDPGT+ISYPKFF   L+
Sbjct: 271 VLKSLGWSEKEIFAAFKREPLCLARSEEKMRDVADFCLNTAKLDPGTVISYPKFFMCALD 330

Query: 301 KRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKHLDEIPDLMDIYRGNAA 360
           KRL PRYKVLEVLK KNL+ KNKKIA + +  ER+FVENY+LKHLDEIPDLMDIYRGN A
Sbjct: 331 KRLRPRYKVLEVLKAKNLL-KNKKIAWVLLQGERNFVENYILKHLDEIPDLMDIYRGNVA 390

Query: 361 A 362
           A
Sbjct: 391 A 390

[Close]
BLAST of CmUC11G216580 vs. NCBI nr
Match: XP_022983916.1 (transcription termination factor MTERF9, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 536.6 bits (1381), Expect = 1.7e-148
Identity = 281/368 (76.36%), Postives = 312/368 (84.78%), Query Frame = 0 

Query: 1   MSKISSTFLLYFIQKRFVNTVSSSTLPLASVSTIEFLKNSCGLAC-------RKLLTDEK 60
           MSKISSTFLLYFIQ RF+NTVSSSTLPLASVSTIEFLKNSCGLA        RKL  DEK
Sbjct: 1   MSKISSTFLLYFIQNRFINTVSSSTLPLASVSTIEFLKNSCGLAADSPFSAGRKLQFDEK 60

Query: 61  NPQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPK 120
           + +KYEA++ F KSYGFENSQIAKL++ +P+IL SRV  NLKPKFEFL++IG VGPLLPK
Sbjct: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLKDIGFVGPLLPK 120

Query: 121 VILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVL 180
           VIL NP IL R L+  LKPSFCFIKEMLES E    AIRR+SWLLT  FKG+MQ N++VL
Sbjct: 121 VILSNPGILLRGLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSSFKGVMQSNVNVL 180

Query: 181 VGEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDS 240
           +GEGVPSRNI+KLI LQPRTIM+KVDRMV AVK VKELG EP   MFVHALRV+VS++D+
Sbjct: 181 LGEGVPSRNISKLIGLQPRTIMQKVDRMVCAVKKVKELGIEPHTRMFVHALRVVVSISDT 240

Query: 241 TWKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
           TWKKKINVLKS G SEKEILTAFKR+P+CLACSEEKMR VADFC NTAKLDP T+ISYPK
Sbjct: 241 TWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCLNTAKLDPETVISYPK 300

Query: 301 FFRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKHLDEIPDLMD 360
           FF  GL+K L PR+KVLEVLKVK LI KN+KIA L  L ER+FV NYVLKHLDE+PDLMD
Sbjct: 301 FFMSGLDKCLRPRFKVLEVLKVKKLI-KNRKIAWLLFLGERNFVTNYVLKHLDEVPDLMD 360

Query: 361 IYRGNAAA 362
           IYRGNAAA
Sbjct: 361 IYRGNAAA 367

[Close]
BLAST of CmUC11G216580 vs. NCBI nr
Match: KAG6601090.1 (Transcription termination factor MTERF9, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 536.6 bits (1381), Expect = 1.7e-148
Identity = 277/368 (75.27%), Postives = 312/368 (84.78%), Query Frame = 0 

Query: 1   MSKISSTFLLYFIQKRFVNTVSSSTLPLASVSTIEFLKNSCGL-------ACRKLLTDEK 60
           MSKISSTFLLYFIQ RF+NTVS STLPLASVSTIEFL+NSCGL       A RKL  DEK
Sbjct: 1   MSKISSTFLLYFIQNRFINTVSGSTLPLASVSTIEFLENSCGLATDSPSSALRKLQFDEK 60

Query: 61  NPQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPK 120
           + +KYEA++ F KSYGFENSQI KL++ RP+IL SRVS NLKPKFEFLEEIG  GPLLPK
Sbjct: 61  SARKYEAVLGFLKSYGFENSQIVKLIAKRPSILQSRVSSNLKPKFEFLEEIGFFGPLLPK 120

Query: 121 VILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVL 180
           VIL NP IL R L+ QLKPSFCFIKEMLES E    AIRR+SWLLTFDFKG+MQ N++VL
Sbjct: 121 VILSNPAILQRGLDSQLKPSFCFIKEMLESDEQANFAIRRSSWLLTFDFKGVMQSNVNVL 180

Query: 181 VGEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDS 240
           +GEGVPSRNI+KLI  QPRTIM+KVDRMV AVK VKELG EP+  MFV ALRV++SMND+
Sbjct: 181 LGEGVPSRNISKLIAQQPRTIMQKVDRMVCAVKKVKELGIEPQTRMFVRALRVVLSMNDT 240

Query: 241 TWKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
           TWKKKINV KS G SEKEILTAFKR+P+CLACSEEKMR VADFCFN AKLDP T+IS+P 
Sbjct: 241 TWKKKINVFKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCFNAAKLDPETVISHPT 300

Query: 301 FFRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKHLDEIPDLMD 360
           FF  GL+KRL PR+KV+EVLKVK LI +N+KIA+L ++ ER FV+NYVLKHLDE+PDLMD
Sbjct: 301 FFMSGLDKRLRPRFKVVEVLKVKKLI-ENRKIARLLVVGERIFVKNYVLKHLDEVPDLMD 360

Query: 361 IYRGNAAA 362
           IYRGNA A
Sbjct: 361 IYRGNATA 367

[Close]
BLAST of CmUC11G216580 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.7e-08
Identity = 61/279 (21.86%), Postives = 120/279 (43.01%), Query Frame = 0 

Query: 69  GFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPKVILWNPTILSRSLNY 128
           G    QI  +     A  +  +   +KP  EFL ++GI    +P ++   P I   SL  
Sbjct: 207 GLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTD 266

Query: 129 QLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVLVGEGVPSRNITKLIV 188
            LKP+  F++ +   K      I R   +LT+  +  +   ++ L   G+    I +++ 
Sbjct: 267 NLKPTMAFLETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQTGLTEEQIGRILT 326

Query: 189 LQPRTIMRKV-DRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDSTWKKKIN---VLKS 248
             P  +   V D++   ++  + L  +    + +H       ++  +  K +    + K 
Sbjct: 327 RCPNIMSYSVEDKLRPTMEYFRSLNVD--VAVLLHRCPQTFGLSIESNLKPVTEFFLEKG 386

Query: 249 FGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPKFFRYGLNKRLW 308
           FGL E  I+ +     +  +  E  M    D+ F T       L+ +P+FF Y L +R+ 
Sbjct: 387 FGLDEIGIMISRYGALYTFSLKENVM-PKWDY-FQTMDYPKSELVKFPQFFGYSLQERIK 446

Query: 309 PRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLK 344
           PRY++++   V+ L+    ++  L  +E    V+  ++K
Sbjct: 447 PRYELVQRSGVRLLL---NQVLSLSGIEFEKVVKKKMMK 477

[Close]
BLAST of CmUC11G216580 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-07
Identity = 59/305 (19.34%), Postives = 122/305 (40.00%), Query Frame = 0 

Query: 61  IISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPKVILWNPT 120
           ++ + +    + S + +++   P +L  ++   +     +L  IG+    +  ++   P 
Sbjct: 218 VVKYLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPE 277

Query: 121 ILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVLVGEGVPS 180
           IL   +   +KP   +++ +   +      I +   +L F+    ++PN+ +L    V  
Sbjct: 278 ILGMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRE 337

Query: 181 RNITKLIVLQPRTI----MRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDSTWK 240
            ++  +I   P  I      K+D     + +   L  E   G  +  +   VS+++S   
Sbjct: 338 TSLPSIIAQYPEIIGIDLKPKLDTQRKLLCSAIHLNPE-DLGSLIERMPQFVSLSESPML 397

Query: 241 KKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPKFFR 300
           K I+ L   G S  +        P  LA +   M+   ++     K     L+ +P FF 
Sbjct: 398 KHIDFLTKCGFSIDQTREMVIGCPQVLALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFT 457

Query: 301 YGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFML-------EERSFVENYVLKHLDEIP 355
           YGL   + PR+        K +IKK  K +  +ML       E+R   +   ++ ++  P
Sbjct: 458 YGLESTVKPRH--------KKIIKKGIKCSLAWMLNCSDEKFEQRMSYDTIDIEEVETDP 513

[Close]
BLAST of CmUC11G216580 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.8e-07
Identity = 33/145 (22.76%), Postives = 74/145 (51.03%), Query Frame = 0 

Query: 56  QKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGI-VGPLLPKV 115
           +K   +++FF++ G   +Q+ K++   P ++   +   L     FL  +G+    ++ KV
Sbjct: 112 EKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKV 171

Query: 116 ILWNPTILSRSLNYQLKPSFCFIKEMLE-SKENVIAAIRRASWLLTFDFKGIMQPNIDVL 175
           ++ NP ++  S++ +L+P+  F+K  +  S++ + + +     LL  D   I++PN D L
Sbjct: 172 LVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYL 231

Query: 176 VGEGVPSRNITKLIVLQPRTIMRKV 199
              G     I  ++   P+ +++ V
Sbjct: 232 KECGFGDSQIATMVTGYPQILIKSV 256

[Close]
BLAST of CmUC11G216580 vs. ExPASy Swiss-Prot
Match: Q9C6A1 (Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF15 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.3e-07
Identity = 64/290 (22.07%), Postives = 114/290 (39.31%), Query Frame = 0 

Query: 55  PQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPKV 114
           P K+   +   KS GF +S +++++S  P +L       ++ K EFL  IGI    + + 
Sbjct: 144 PDKFNECVRVLKSLGFCDSTVSRILSSFPGVLLVN-EIEIRRKIEFLVGIGIARDNIERF 203

Query: 115 ILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVLV 174
               P +L      +LKP      +M  SK++V   I R   +L  +             
Sbjct: 204 FHVFPEVLGIGTETRLKPLLDEFMKMGFSKDDVKKEIAREPRVLGLEL------------ 263

Query: 175 GEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDST 234
             G   R +  +  L+ R ++R        V  + E  F  +AG  V             
Sbjct: 264 --GELPRCLELINTLKCREVIR--------VSIISEGAF--RAGFEV------------- 323

Query: 235 WKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPKF 294
            K +++ L  +GL  ++      +EP  +    E +    +F  N        L   P++
Sbjct: 324 -KLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCLADVPEY 383

Query: 295 FRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKH 345
               L K++ PRY V++ LK+K  +  +  +  L     + F   YV+ +
Sbjct: 384 LGVNLQKQIVPRYNVIDYLKLKGGLGCDIGLKGLIKPSMKRFYNLYVMPY 394

[Close]
BLAST of CmUC11G216580 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 8.7e-07
Identity = 37/141 (26.24%), Postives = 63/141 (44.68%), Query Frame = 0 

Query: 62  ISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPKVILWNPTI 121
           + F  S    N  +A      P  L   V KN+ P  ++L ++G+    LP ++   P +
Sbjct: 116 VEFLHSLDLSNEDLAAY----PLALGCSVRKNMVPVLDYLGKLGVRQDALPDLLRRYPQV 175

Query: 122 LSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVLVGEGVPSR 181
           L  S+   L P   +++ M     +V   + R   LL F  +G M  +I  LVG GV  R
Sbjct: 176 LHASVVVDLAPVVKYLQGMDVRPHDVPRVLERYPELLGFKLEGTMSTSIAYLVGIGVARR 235

Query: 182 NITKLIVLQPRTIMRKVDRMV 203
            +  +I   P  +  +V +++
Sbjct: 236 QVGSVITRFPEVLGMRVGKII 252

[Close]
BLAST of CmUC11G216580 vs. ExPASy TrEMBL
Match: A0A6J1J3P9 (transcription termination factor MTERF9, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482390 PE=3 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 8.1e-149
Identity = 281/368 (76.36%), Postives = 312/368 (84.78%), Query Frame = 0 

Query: 1   MSKISSTFLLYFIQKRFVNTVSSSTLPLASVSTIEFLKNSCGLAC-------RKLLTDEK 60
           MSKISSTFLLYFIQ RF+NTVSSSTLPLASVSTIEFLKNSCGLA        RKL  DEK
Sbjct: 1   MSKISSTFLLYFIQNRFINTVSSSTLPLASVSTIEFLKNSCGLAADSPFSAGRKLQFDEK 60

Query: 61  NPQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPK 120
           + +KYEA++ F KSYGFENSQIAKL++ +P+IL SRV  NLKPKFEFL++IG VGPLLPK
Sbjct: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLKDIGFVGPLLPK 120

Query: 121 VILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVL 180
           VIL NP IL R L+  LKPSFCFIKEMLES E    AIRR+SWLLT  FKG+MQ N++VL
Sbjct: 121 VILSNPGILLRGLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSSFKGVMQSNVNVL 180

Query: 181 VGEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDS 240
           +GEGVPSRNI+KLI LQPRTIM+KVDRMV AVK VKELG EP   MFVHALRV+VS++D+
Sbjct: 181 LGEGVPSRNISKLIGLQPRTIMQKVDRMVCAVKKVKELGIEPHTRMFVHALRVVVSISDT 240

Query: 241 TWKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
           TWKKKINVLKS G SEKEILTAFKR+P+CLACSEEKMR VADFC NTAKLDP T+ISYPK
Sbjct: 241 TWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCLNTAKLDPETVISYPK 300

Query: 301 FFRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKHLDEIPDLMD 360
           FF  GL+K L PR+KVLEVLKVK LI KN+KIA L  L ER+FV NYVLKHLDE+PDLMD
Sbjct: 301 FFMSGLDKCLRPRFKVLEVLKVKKLI-KNRKIAWLLFLGERNFVTNYVLKHLDEVPDLMD 360

Query: 361 IYRGNAAA 362
           IYRGNAAA
Sbjct: 361 IYRGNAAA 367

[Close]
BLAST of CmUC11G216580 vs. ExPASy TrEMBL
Match: A0A6J1GYF2 (transcription termination factor MTERF5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458616 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 6.9e-148
Identity = 277/368 (75.27%), Postives = 312/368 (84.78%), Query Frame = 0 

Query: 1   MSKISSTFLLYFIQKRFVNTVSSSTLPLASVSTIEFLKNSCGL-------ACRKLLTDEK 60
           MSKISSTFLLYFIQ RF+NTVS STLPLASVSTIEFLKNSCGL       A RKL  DEK
Sbjct: 1   MSKISSTFLLYFIQNRFINTVSGSTLPLASVSTIEFLKNSCGLATDSPSSALRKLQFDEK 60

Query: 61  NPQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPK 120
           + +KYEA++ F KSYGFENSQIAKL++ R +IL SRVS NLKPKFEFLEEIG VGPLLPK
Sbjct: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKRSSILQSRVSSNLKPKFEFLEEIGFVGPLLPK 120

Query: 121 VILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVL 180
           VIL NP IL R L+  LKPSFCFIKEMLES E    AIRR+SWLLT +FKG+MQ N++VL
Sbjct: 121 VILSNPAILQRGLDSHLKPSFCFIKEMLESDEQANFAIRRSSWLLTSNFKGVMQSNVNVL 180

Query: 181 VGEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDS 240
           +GEGVPSRNI+KLI  QPRTIM+KVDRMV AVK VKELG EP+  MFV ALRV++SMND+
Sbjct: 181 LGEGVPSRNISKLIAQQPRTIMQKVDRMVCAVKKVKELGIEPQTRMFVRALRVVLSMNDT 240

Query: 241 TWKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
           TWKKKINVLKS G SEKEILTAFKR+P+CLACSEEKMR VADFCFN AKLDP T+ISYP 
Sbjct: 241 TWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCFNAAKLDPETVISYPT 300

Query: 301 FFRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKHLDEIPDLMD 360
           FF  GL+KRL PR+KV+EVLKVK LI +N+KIA+L ++ ER FV+NYVLKHLDE+PDLM+
Sbjct: 301 FFMSGLDKRLRPRFKVVEVLKVKKLI-ENRKIARLLVVGERIFVKNYVLKHLDEVPDLME 360

Query: 361 IYRGNAAA 362
           IYRGNA A
Sbjct: 361 IYRGNATA 367

[Close]
BLAST of CmUC11G216580 vs. ExPASy TrEMBL
Match: A0A6J1GYC4 (transcription termination factor MTERF5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458617 PE=3 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 5.8e-147
Identity = 281/368 (76.36%), Postives = 308/368 (83.70%), Query Frame = 0 

Query: 1   MSKISSTFLLYFIQKRFVNTVSSSTLPLASVSTIEFLKNSCGL-------ACRKLLTDEK 60
           MSKISS FLLYFIQ RFVNTVSSSTLPLASVSTIEFLKNSCGL       A RKL  DEK
Sbjct: 1   MSKISSKFLLYFIQNRFVNTVSSSTLPLASVSTIEFLKNSCGLATDSPSSALRKLQFDEK 60

Query: 61  NPQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPK 120
           + +KYEA+  F KSYGFENSQIAKL++ RP+IL SRVS NLKPKFEFLEEIG VGPLLPK
Sbjct: 61  SAKKYEAVPRFLKSYGFENSQIAKLIAKRPSILQSRVSSNLKPKFEFLEEIGFVGPLLPK 120

Query: 121 VILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVL 180
           VIL NP IL R L+  LKPSFCFIKEMLES E    AIRR SWLLT + KG+MQ N++VL
Sbjct: 121 VILSNPAILQRGLDSHLKPSFCFIKEMLESDEQANFAIRRFSWLLTSNLKGVMQSNVNVL 180

Query: 181 VGEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDS 240
           + EGVPSRNI+KLI LQPRTI++KVDRMV AVK VKELG EP   MFVHALRV+VS++D+
Sbjct: 181 LSEGVPSRNISKLIRLQPRTILQKVDRMVCAVKKVKELGIEPHTRMFVHALRVVVSISDT 240

Query: 241 TWKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
           TWKKKINVLKS G SEKEILTAFKR+P+CLACSEEKMR VADFC NTAKLDP T+ISYPK
Sbjct: 241 TWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCLNTAKLDPETVISYPK 300

Query: 301 FFRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKHLDEIPDLMD 360
           FF  GL+K L PR+KV+EVLKVK LI KN KIA L  L ER+FV NYVLKHLDE+PDLMD
Sbjct: 301 FFMSGLDKCLRPRFKVVEVLKVKKLI-KNTKIAWLLFLGERNFVTNYVLKHLDEVPDLMD 360

Query: 361 IYRGNAAA 362
           IYRGNAAA
Sbjct: 361 IYRGNAAA 367

[Close]
BLAST of CmUC11G216580 vs. ExPASy TrEMBL
Match: A0A6J1J774 (transcription termination factor MTERF9, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482382 PE=3 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 5.5e-145
Identity = 276/368 (75.00%), Postives = 307/368 (83.42%), Query Frame = 0 

Query: 1   MSKISSTFLLYFIQKRFVNTVSSSTLPLASVSTIEFLKNSCGLAC-------RKLLTDEK 60
           MSKISS FLLYFIQ RFVNTVSSSTLP ASVSTIEFLKN+CGLA        RKL  DEK
Sbjct: 1   MSKISSKFLLYFIQNRFVNTVSSSTLPSASVSTIEFLKNTCGLAADSPSSAGRKLQFDEK 60

Query: 61  NPQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPK 120
           + +KYEA++ F KSYGFENSQIAKL++ +P+IL SRV  NLKPKFEFLE+IG VGPLL K
Sbjct: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLEDIGFVGPLLAK 120

Query: 121 VILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVL 180
           VIL NP+IL R L+  LKPSFCFIKEMLES E    AIRR+SWLLT + KG+MQ N++VL
Sbjct: 121 VILLNPSILLRGLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSNLKGVMQSNVNVL 180

Query: 181 VGEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDS 240
           +GEGVPSRNI+KLI  QPRTIM+KVDRMV AVK VKELG EP+  MFV ALRV++SMND+
Sbjct: 181 LGEGVPSRNISKLIGQQPRTIMQKVDRMVCAVKKVKELGVEPQTRMFVRALRVVLSMNDT 240

Query: 241 TWKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
           TWKKKINVLKS G SEKEILTAFKR+P CLACSEEKMR  ADFC NTAKLDP T+ISYPK
Sbjct: 241 TWKKKINVLKSLGWSEKEILTAFKRDPLCLACSEEKMRAAADFCLNTAKLDPETVISYPK 300

Query: 301 FFRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKHLDEIPDLMD 360
           FF YGL+K L PR+KVLEVLKVK LI KN+KIA L  L ER FV NYVLK+LDE+PDLMD
Sbjct: 301 FFMYGLDKWLRPRFKVLEVLKVKKLI-KNRKIAWLLFLGEREFVTNYVLKYLDEVPDLMD 360

Query: 361 IYRGNAAA 362
           IYRGNAAA
Sbjct: 361 IYRGNAAA 367

[Close]
BLAST of CmUC11G216580 vs. ExPASy TrEMBL
Match: A0A6J1GZE2 (transcription termination factor MTERF5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458618 PE=3 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 8.7e-143
Identity = 270/368 (73.37%), Postives = 307/368 (83.42%), Query Frame = 0 

Query: 1   MSKISSTFLLYFIQKRFVNTVSSSTLPLASVSTIEFLKNSCGL-------ACRKLLTDEK 60
           MSKISS FLLYFIQ RFVNT SSSTLP ASVSTIEFLKNSCGL       A RKL  DEK
Sbjct: 1   MSKISSKFLLYFIQNRFVNTASSSTLPSASVSTIEFLKNSCGLAPGSPSSAGRKLQFDEK 60

Query: 61  NPQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPK 120
           + +KYEA++ F KSYGFENSQIAKL++ +P+IL SRV  NLKPKFEFLE+IG VGPLLPK
Sbjct: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVCNNLKPKFEFLEDIGFVGPLLPK 120

Query: 121 VILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVL 180
           VIL +P+IL R L+  LKPSFCFIKEML S E    AI R+SWLLT + KG+MQ N++VL
Sbjct: 121 VILLDPSILQRGLDSHLKPSFCFIKEMLGSDEQANVAILRSSWLLTSNLKGVMQSNVNVL 180

Query: 181 VGEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDS 240
           +GEGVPSRNI+KLI  QPRTIM KVDR+V AVK +KELG EP+  MFV ALRV++SMND+
Sbjct: 181 LGEGVPSRNISKLIGQQPRTIMHKVDRVVCAVKKIKELGIEPQTCMFVRALRVVMSMNDT 240

Query: 241 TWKKKINVLKSFGLSEKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
           TWKKKINVLKS G SEKEILTAFK++P+CLACSEEKMR VADFC NTAKLDP T+IS PK
Sbjct: 241 TWKKKINVLKSLGWSEKEILTAFKKDPYCLACSEEKMRAVADFCLNTAKLDPETVISNPK 300

Query: 301 FFRYGLNKRLWPRYKVLEVLKVKNLIKKNKKIAQLFMLEERSFVENYVLKHLDEIPDLMD 360
           FF YGL+K L PR+KV+EVLKVK LI KN KIA L +L+ER FV+NYVLKHLDE+PDLMD
Sbjct: 301 FFMYGLDKWLRPRFKVVEVLKVKKLI-KNTKIAWLLLLDERIFVKNYVLKHLDEVPDLMD 360

Query: 361 IYRGNAAA 362
           I+RGNAAA
Sbjct: 361 IFRGNAAA 367

[Close]
BLAST of CmUC11G216580 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 208.4 bits (529), Expect = 9.8e-54
Identity = 114/333 (34.23%), Postives = 184/333 (55.26%), Query Frame = 0 

Query: 33  TIEFLKNSCGL-------ACRKLLTDEKNPQKYEAIISFFKSYGFENSQIAKLVSLRPAI 92
           T+ +L +SCGL       A RKLL D  +P++   +++  + +GF  +QI+ LV  RP +
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLD--SPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 93  LHSRVSKNLKPKFEFLEEIGIVGPLLPKVILWNPTILSRSLNYQLKPSFCFIKEMLESKE 152
           L +     L PK  F   IG+   LL + +  +PTIL+RSL  QL PS+ F+K +L+S E
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 153 NVIAAIRRASWLLTFDFKGIMQPNIDVLVGEGVPSRNITKLIVLQPRTIMRKVDRMVYAV 212
            ++AA+RR +W+   D    + PNI+ +   GVP + I  L+   P  +M+K        
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 213 KAVKELGFEPKAGMFVHALRVMVSM-NDSTWKKKINVLKSFGLSEKEILTAFKREPHCLA 272
           K  +E+GF P+   FV A+  +    N S W K   V + +G SE +I+ AFK+ PHC+ 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 273 CSEEKMRDVADFCFNTAKLDPGTLISYPKFFRYGLNKRLWPRYKVLEVLKVKNLIKKNKK 332
            SE K+    ++  N   + P ++   P    + L KR+ PR  V +VL    L+K++  
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 333 IAQLFMLEERSFVENYVLKHLDEIPDLMDIYRG 358
           +  L +  E+ F+E  V+K+ +E+P+LM++Y G
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]
BLAST of CmUC11G216580 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 152.1 bits (383), Expect = 8.3e-37
Identity = 92/351 (26.21%), Postives = 170/351 (48.43%), Query Frame = 0 

Query: 18  VNTVSSSTL----PLASVSTIEFLKNSCGLACRKLLTDEK-----NPQKYEAIISFFKSY 77
           V+ V S  L    P     T+ +L +SCGL+     ++ +     + +K +++++ FK +
Sbjct: 39  VSQVKSENLEKQKPCLESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDH 98

Query: 78  GFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPKVILWNPTILSRSLNY 137
           GF N QI  ++   P +L       + PK  F   IG       K+I  +P +LS SL+ 
Sbjct: 99  GFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHK 158

Query: 138 QLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVLVGEGVPSRNITKLIV 197
           +L P +  +K +L  +E+V+  ++R     +      +   + +    GVP ++I  L+ 
Sbjct: 159 RLIPCYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQ 218

Query: 198 LQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDSTWKKKINVLKSFGLS 257
             P T   +  R    +  V   GF+PK   FVHA+      ++S  ++K  + + FG S
Sbjct: 219 ASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWS 278

Query: 258 EKEILTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPKFFRYGLNKRLWPRYK 317
           +++ + A  R P+C+  S+EK+    ++  N   L    +++ P      + KR+ PR +
Sbjct: 279 KEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQ 338

Query: 318 VLEVLKVKNLIKKNK-KIAQLFMLEERSFVENYVLKHLDEIPDLMDIYRGN 359
           V+ +L  K L+KK       +  L+   F++ +VLK+ DE+P L+  +  N
Sbjct: 339 VISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

[Close]
BLAST of CmUC11G216580 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 150.2 bits (378), Expect = 3.2e-36
Identity = 101/342 (29.53%), Postives = 173/342 (50.58%), Query Frame = 0 

Query: 23  SSTLPLASVST---IEFLKNS-----CGLACRKLLTDEKNPQKYEAIISFFKSYGFENSQ 82
           SS    AS+S    +EFL+++       +A      + K+ ++  ++I   KSY F ++Q
Sbjct: 28  SSNATPASISNPAFVEFLRDNGFQKPLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQ 87

Query: 83  IAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPKVILWNPTILSRSLNYQLKPSF 142
           I K + + P ++   V K L+PK  F ++IG  G  L K +  N +++  SL  +L P+ 
Sbjct: 88  IQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTV 147

Query: 143 CFIKEMLESK-ENVIAAIRRASW-LLTFDFKGIMQPNIDVLVGEGVPSRNITKLIVLQPR 202
             +K ++  K E++   + R  W LL+ D    + PNI  L   G+    +  L+  QPR
Sbjct: 148 EILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPR 207

Query: 203 TIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDSTWKKKINVLKSFGLSEKEI 262
                 +++   V    +LGF   + M VHA+  + S+++ T+ +K+ +  + G SE EI
Sbjct: 208 IFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEI 267

Query: 263 LTAFKREPHCLACSEEKMRDVADFCFNTAKLDPGTLISYPKFFRYGLNKRLWPRYKVLEV 322
               +R P  + CSE+K+    +F      L+   L   P    Y L KR+ PR KVL++
Sbjct: 268 TDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQI 327

Query: 323 LKVKNLI----KKNKKIAQLFMLEERSFVENYVLKHLDEIPD 351
           L+ K L+    KK K +  +  + E +F+E YV++  DEI +
Sbjct: 328 LREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAE 369

[Close]
BLAST of CmUC11G216580 vs. TAIR 10
Match: AT1G61990.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 127.1 bits (318), Expect = 2.9e-29
Identity = 103/399 (25.81%), Postives = 183/399 (45.86%), Query Frame = 0 

Query: 13  IQKRFVNTVSSSTLPLASVS----------TIEFLKNSCGLA-------CRKLLTDEK-N 72
           +Q  FV + S S+   A VS          T+ +L +S GL+        RK+  ++K N
Sbjct: 24  VQNAFVLSNSFSSARAADVSIRDGRKGKNFTVSYLVDSLGLSKKLAESISRKVSFEDKVN 83

Query: 73  PQKYEAIISFFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPKV 132
           P   ++++S F+SYGF +SQI+ +++  P +L +   K L  K + L+  G     + ++
Sbjct: 84  P---DSVLSLFRSYGFTDSQISTIITDYPLLLVADAKKALGRKLQILQSRGASSSEITEI 143

Query: 133 ILWNPTILSRSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVLV 192
           +   P IL +            I    ++ +++I A   +S+ L    +G    N+  L 
Sbjct: 144 VSTVPRILGKK----------SITVYYDAVKDIIVADTSSSYELPQGSQGNKIRNVSALR 203

Query: 193 GEGVPSRNITKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDST 252
             G+PSR +  L+V + + +  K +    ++K V E+GF+P    FV ALR++  M++ T
Sbjct: 204 ELGMPSRLLLPLLVSKSQPVCGK-ENFDASLKKVVEMGFDPTTTKFVLALRMLYQMSEKT 263

Query: 253 WKKKINVLKSFGL-----------------------------------SEKEILTAFKRE 312
            ++K+ V +S G                                    S  E L   KR 
Sbjct: 264 IEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRY 323

Query: 313 PHCLACSEEKMRDVADFCFNTAKLDPGTLISYPKFFRYGLNKRLWPRYKVLEVLKVKNLI 356
           P C+  S E ++   +F     K     L+ +P+ F Y + KR+ PR  +LE L  K L+
Sbjct: 324 PPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGLL 383

[Close]
BLAST of CmUC11G216580 vs. TAIR 10
Match: AT3G46950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 125.6 bits (314), Expect = 8.3e-29
Identity = 102/423 (24.11%), Postives = 187/423 (44.21%), Query Frame = 0 

Query: 12  FIQKRFVNTVSSSTLPLASVSTIEFLKNSCGLACRKLLT--------DEKNPQKYEAIIS 71
           F  K F +T++  + P  S  T+ +L  S GL  +   T        D+ NP   +++++
Sbjct: 33  FTTKSFSSTIAKDSSPKGSTFTVSYLVESLGLTKKLAETISKKVTFEDKVNP---DSVLN 92

Query: 72  FFKSYGFENSQIAKLVSLRPAILHSRVSKNLKPKFEFLEEIGIVGPLLPKVILWNPTILS 131
             +S GF++SQI++++   P +L +   K+L+PK +FL+  G     + +++   PTIL 
Sbjct: 93  LLRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPTILD 152

Query: 132 RSLNYQLKPSFCFIKEMLESKENVIAAIRRASWLLTFDFKGIMQPNIDVLVGEGVPSRNI 191
           +     +   + F+K++++  +++  +            KG    NI VL   GVP + +
Sbjct: 153 KKGEESVSLYYDFVKDIMQDGKSLCISCPEGK-------KGNRIRNISVLRELGVPQKLL 212

Query: 192 TKLIVLQPRTIMRKVDRMVYAVKAVKELGFEPKAGMFVHALRVMVSMNDSTWKKKINV-- 251
             L++ + + +  K ++   ++K V ++GF+P    FV AL V+  M++ T ++K+NV  
Sbjct: 213 FSLLISRYQPVCGK-EKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYK 272

Query: 252 ---------------------------------LKSFGLSEKEILTAFKREPHCLACSEE 311
                                            LK  GL E+EI++  K  P C+  SE+
Sbjct: 273 RLGFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCGLVEEEIISVLKSRPQCIRSSEQ 332

Query: 312 KMRDVA-----------DFCFNTAKLDPGT------------------------LISYPK 356
           K+ D             DF     +    T                        ++  P 
Sbjct: 333 KILDSIEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEVLVKMMNWPLEAVVMIPT 392

The following BLAST results are available for this feature:
BLAST of CmUC11G216580 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038876362.12.4e-15580.33transcription termination factor MTERF5, chloroplastic-like [Benincasa hispida][more]
XP_023529167.18.1e-15176.90transcription termination factor MTERF5, chloroplastic-like [Cucurbita pepo subs... [more]
XP_038892570.16.8e-15078.67transcription termination factor MTERF9, chloroplastic-like [Benincasa hispida][more]
XP_022983916.11.7e-14876.36transcription termination factor MTERF9, chloroplastic-like [Cucurbita maxima][more]
KAG6601090.11.7e-14875.27Transcription termination factor MTERF9, chloroplastic, partial [Cucurbita argyr... [more]
BLAST of CmUC11G216580 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4JVI32.7e-0821.86Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O... [more]
Q9ZT961.3e-0719.34Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O... [more]
Q9SZL61.8e-0722.76Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop... [more]
Q9C6A12.3e-0722.07Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana ... [more]
Q6AUK68.7e-0726.24Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja... [more]
BLAST of CmUC11G216580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J3P98.1e-14976.36transcription termination factor MTERF9, chloroplastic-like OS=Cucurbita maxima ... [more]
A0A6J1GYF26.9e-14875.27transcription termination factor MTERF5, chloroplastic-like OS=Cucurbita moschat... [more]
A0A6J1GYC45.8e-14776.36transcription termination factor MTERF5, chloroplastic-like OS=Cucurbita moschat... [more]
A0A6J1J7745.5e-14575.00transcription termination factor MTERF9, chloroplastic-like OS=Cucurbita maxima ... [more]
A0A6J1GZE28.7e-14373.37transcription termination factor MTERF5, chloroplastic-like OS=Cucurbita moschat... [more]
BLAST of CmUC11G216580 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G07900.19.8e-5434.23Mitochondrial transcription termination factor family protein [more]
AT1G21150.18.3e-3726.21Mitochondrial transcription termination factor family protein [more]
AT5G64950.13.2e-3629.53Mitochondrial transcription termination factor family protein [more]
AT1G61990.12.9e-2925.81Mitochondrial transcription termination factor family protein [more]
AT3G46950.18.3e-2924.11Mitochondrial transcription termination factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 112..143
e-value: 180.0
score: 9.7
coord: 218..248
e-value: 8.8
score: 15.3
coord: 148..179
e-value: 110.0
score: 11.2
coord: 76..107
e-value: 1.1E-4
score: 31.5
coord: 184..214
e-value: 250.0
score: 8.5
coord: 253..284
e-value: 590.0
score: 5.7
coord: 285..316
e-value: 120.0
score: 11.0
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 62..258
e-value: 1.8E-27
score: 96.1
coord: 227..333
e-value: 4.7E-17
score: 61.9
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 22..359
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 136..348
e-value: 6.0E-39
score: 135.8
NoneNo IPR availablePANTHERPTHR13068:SF31TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKEcoord: 22..359

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC11G216580.1CmUC11G216580.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006353 DNA-templated transcription, termination
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003690 double-stranded DNA binding