CmUC11G215360 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC11G215360
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	RNA-binding KH domain-containing protein PEPPER
Location	CmU531Chr11: 22791067 .. 22805615 (-)
RNA-Seq Expression	CmUC11G215360
Synteny	CmUC11G215360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTACTCTCTCTCTCTCTCTCTCGGTTTTACTCAGCCGACAGCACCTCTCTAACTTGTTTCTCTCTCAGCTACTCCTCCTCACATCGCCGCCGTTGCTGCTGTGCCGCCGCCATCGGATCTCCCTCTCGAACGCTGCTACCACCGCCGCTGCCGTCGTCGGATTTCTCTCTTCACCGCCGCCGCTGTCTTTTACTGCAATTCAGTCGGGGTAAGGCGGTATGCCATTACTTGGTTTTCTAGGTTGAATACATGACTGGTCTAATTGTGGGTTATTGTTGTTGTGGGTATGTCAGGATTTTCAACCCAAGTTTCTGGACAGGATTTGAGTTGCGCAGTCAAGTGACTAAACCAAATCTCCCTGTAAGTAATTGCCCTATCGATGGTATTACTGGACTCGATACCTCGAATTTCTAGACTGTTTCTCTAATAATTGGAATGGTTGTATAGCTTGTTCTTACTGTTACCTAATTTGGATGTTTGGATTGTCGCTTCCGATCAATAGGACCTTGGGTAGGTTTAGCACATGTACATTTTGTCAGTGTAACATCCCCTGTAGGTGCACATACAACGTGATAGATACCAGGCTCAGGTGACCACAGGGTAGATGCCATGATAGTATGCTATAGACTCCGTTTACCCTTAAACGCATATTATTGTTCCCTACGTTGGCAGCATGTTCACCAGTTCGTGTCTATTCGGGGCACCAGTATGTGTTCCTTCGGGATCACCAATATGCGTTCCTTCGGGATCACCAGTTTGTGAACGCGTTTTGCCAACGATAGAGGTTATCTATGTGTTCCTTCGGGGCACCAGTTTGTGTTCCTTTGGGACACCAGTATGTGTTCCTTCAGGATCACCAGTATGCGTTCCTTCGGGATCACTAGTTTGTGAACGTGCTTTGCCAATGATAAGGGTTATCTATGCTAATTTCATGTTGTATGCATACAGATTCAATTGTTTAGTTGAGCCCGGTAGCGGGATTACTTACTAAGTATCTTCATACTCATCCTTTTCTTTTATGCCTCCAGGCAAGGGAAAGAACGTGCCGACGAATGACAAGAAGAATCCTTGAGGTGCTATGGGACTCGCAGGGTCTTCCGCTAGGATTGCATACGCATGTTTTTTTCTTCTGTCATCGAAATTTAAAGTTTAATATGATTTTTTTTTGCGTCATGTTTGGGATTTCATTGTGGAATTTTTTTTACTGAACTTATTTTCTTTTTAATAAATTGAATAATTCCAAAGAAAAAAAAATGTTTTCTTAGGGGTACTTCGAACTAAGTTATTTATCATGCTTTAATAAAAATCTTCTATTTCTCAAAATTATGCTGTCTTTCTTCCTCAATGTTGCATATATCAAGTAATGGTCCAATCAGTCTAGGTGGGCCGTTACAATATATATTTTACCAATCTTATTGTTAGAATTAGATGTGGTGCTTTAACGTGTGATTGCTACTTTCTTGTTTAATTCAAAGTGAAATTATTTGCATAAAATCATTGTTTAAATTATTGGTTAGCAAAAAGTTTGTTAATTTGTTTAATTGGGTCCACATTAGGAAAAAGTTTCAATTAGTTTTAATAAACCCTATTCACCCCCTCTTTAAAGTTTAATACCCTCAACCAAATTAAAAACCTCTTACTGCTAGTATATATGGACGAACATCAATTATCTACACTCACATTTCTCCTCATTTTCTCCCTCTTATTAAATAATAAAACTATAAATAATCATAAGGAACTCCCTTATTTTTTACCATGTCCAAACATGAATATAAGTAATTTCAACACCTAAATAGTCACTTTGTTTTAAGTTATATTAAGTTGGAAAAGAACAAATTTGAAAATAACTCATATAGACGCCATTTTTTTCATATAAATACTCTCATTTTTTTTTTCGTTTGTCCAATTCTTACACCAATTTTCTTAGAAACCAAGCAAGACCCAAGACTCCATAAAATCCCTACAAGTTTGAAAATCGAAGTCTCGTTTCAAAACTTAGCACAACCATGAATCGACAATATAAAAAAGGAATGACAAAGAAGAATCATCTTTGATCATGTGGATCCTTCTTAACTAATTAATCACAATAAATCTCCTCGGTTAAAAAAAAAAAAATCACAATAAAATGGACTAATTTGAATAGCAAGATAGATTAACAAAGTAGTTCCCTAAAAATTTGGTAATTCACATATTTTTTCCCCCTCCCATTGGTTGTCCCTGAGATTATAATATATAGATTCTCAATATTAAAACTCAAACGATATATTAATTCATATAATTACGAAAATGCAACATTTAAGTCCTAAGATTTTATGGTGATTCCATTATTCTTCTTTCTTCTTACTATAGCTTATATACCTTAATTAAAGAGGACAACCATAGAGATTGGAGAATGAAAAAAAGAGAGTAAGAGAGAAAAAAAGGGAGTAAGAGAGTATCGAAGAAGAGAGAAAAATAAAAAAAATAAAAACAGGGAAGTGTTAGACTACAAATTGAAGCATATGAGAGAGATAGAGAAAATTAAGGAGGGAGGTGATTGATGGAGTGTAAATTATTTTTAGTCATTATTAGGTTGGGTTAAGAATATTAATGAAACTTTTAAAAGTTTAAAATATTTTTTAAACGATATATTAGTGGTTTCCATCCAAATAACCATCATCATAATATTTTTTTAACTTTTCTCTTCTTCTTTTTGGAAGTTTTAAGGCACAAACAAAGTACAAATAGATTCTATTCAAAACTAATGATATGTATCTATGGTTTAAGTTTATGATTAAAATTTTAGGGTATTTTCTATAATTAAATAAAAACAAAAATAAATAAACAAAAAGAGATAAAATGGATATGAGGGAGAAGGAGAAAAAAGAAAAAAAAAAAACCCGCAGTTGCCTCTTTTCCCTTTCTCTTCCCTTCATTTTTCTTAAAACCTCTGTAAGCCTTAACCCTAACTTCTTCTTCATCTTTCTCGATGGCCACCAACACAACTACAGAGAATGGCTCCACTGATGCCAACGCCCTCAATTCCAACCCCCAAACTTCAACACTTTCCTCTCTAGCTGCTGCAGAACCAGACTCTACCGAAGCTGGTGGCGCTGATTCCGACATCGATCCTTCTAACCAAGACTACTTATCCGTTCCGGCTTCGGATTCTGCAGCTCATGAAGGCCCCAATCATACTGGCGCTTCCGATAAAAAGTGGCCCGGATGGCCTGGAGACTGCGTCTTCAGGCTTATTGTGCCGGTTGTTAAAGTCGGCAGCATTATTGGGCGTAAGGGCGATCTTATTAAGAAGATGTGTGAGGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTTGTGAGTGTTTCTCAAACCTCAGCTCTTTCTGGTAGTTGTTACTCATGCTTACATAGGGGCAACGAGTTGAATCTCTTATCTTTATATTGGTTTATTTGTTATGTTTGGTTCCAGTTAATGGGACTGTTTGGCTAGTTATTTGTTCAGCCCGACCACCTTTATGTGTTCCTCGATGGATAATTAGACTGGGTGTAATGATTTCTAGTCAAAAGATGTCTCCTTTTTCGATCCCTCGAGGGTTTCAGGGAAAAGGGAAAAAAATAGTATTCTCCCATCTTTGGCTGGTTCCATTAATTACATGCTAGTTTGTCATAACAAGTTATTTTCTACTTCTTTCACAGCAGCCGCTGAAGCGTGGTCTGATATTAGGTTAACTACGAGTATATATGGAACTTGTTGGGTACGAAAAGGAGCTTCTGTTAAACGTTGTTTGGGTTATTTAAAGTTGAGGCTTGATCTATGATGGAGGAGGTGCTTCTGAATTCTTCCTTTAGGGAGAAGGGACAATTGTTATGGCCTGCTAGTTTCTTTGCATTTAGCTTGAGAGGGATAATAGAATCTGTAGAGAGGTGGAGAGAGGTTTGTGAGATGGCTAGGTTTAATGCCTTCTTGTGCGTGCCTTTCACTAAGCCTTTTTGTTTTTTTGTTTTTTGTTTTTTTTTTTTTTAATAATTATGAGCTTGATCTTGTTTTGTTGGATTGGAGTCCTTTTCTGTGGTTAGGATCAAACTCCTTTTTTGTTGTTTGTTTTTGTATGCAATTCTATATTTCATTTCTCCCCGTAGAAGCGTGGTTTCTGACTAAAGGAAAATTGAAGCTTGATCGCGCTTTTTTGTTAATTTTATTTCGCAACATATTTATAGAAAAACTGAACCGTTGTTTCTTTGATGCTTCACTTTGATTTGCAAGAACACTTGGATGCATTTTCAGACAATTGTTCAAACTTGCTTGTTCAGTTTTTAATGTTCAGATTTTACTTCAGGTGCTGATTTCAGGAAAAGAAGAGCTTGAGGCACCCCTTTCCCCTGCTATGGATGCAGTTATAAGAGTCTTCAAACGTGTGTCAGGGTTATCTGAGAATGAAGATGAGGCTAAGGCCTCATTTTGTTCAATTCGGCTACTGGTGGCATCAACTCAAGCAATCAATTTAATTGGAAAGCAGGGTTCATTAATTAAATCTATACAGGAGAGTACTGGAGCCTCTGTAAGAGTATTATCAGGAGGTATGCTTTCATTCTCTGTTATGCACTTGCCACTCTTTTATTGATTGGTTTTGGGCCTAGCTGTATTATTGTCGAAGATCATGAATTCTTCTAGATAGCTAAATTGTAGAGCCATTAAAAAGGTTGTTATTGAGAGAAAGACAAATAAGCACACTGTCCAAAACTTCATTGCAAGAGATGGATCATGCTAAAGAGTAAAAATGCCCCTAGAGAACCAAGGGAATCAATAGAAGACCACCTTCATAATTGAGGTGCAAATGGGTCTGATAAAAATTGGGCAACCATACTAAGCTTTGGTTTTTGCAAAAGAACAATATCCCGAGCAGTATCAACTATAGTGTTTTGATAAGTTACACCTTAACCCTTTTTGTATATATATGCACCTAACTCTTTCCATTTAAGTCCAATTTTGTATTAATCAGTTATTTGACCAGAGAGGCGATTCAGTTATAGGAAGTATTGTTTGTTTGTCTCCTTTAAGTTTGGGATAAAATGTTTGTAAGAAGTGGGAATTTAGGAAGCCTCTGTTAGGAACCAAGGTATGATAGGAATGGTATTAGAGGGATATTAAGGGTATAATAATAAATAGTTAAGTAGTTTGTTAGGGAAGGTTGGTTAAAAATACCGTGGGTAGGAAAGAAGGGGTAAGCAATATTTTGGAATATGACGTAAGGGCTTGAGAGTATCTCAAGATTGGGAGGGTCCAAGTACCTTGAACACTTGGTTTATCTTGTTTTTTCTTTATCATTTATCTTTCAATATATTCGGGTTCTATCAATTTGGTATCAGAGCGGTGAGACTTGAGTATGGTGGCGAAGATGGTAAGTAGAATGATCGTTGTGGAGGAGAAGTTACTGGAATTAGGGAGAGGCAGGCCATGATGGAAGCGAAGATGGAGGAACAGTTCAATGAGGCCAAGACGGCAAGAGATGAGCTCAGAGGAAGGATTGGCAAGCTTTTTGGATTGAGAAGGCATTCCAGGCGATATAGGCAAGAGTTCCACAGAGGGATCGTTGTACACGGATTTGATGGTAAGAGAAACAAGCTGGTGGAGACGTCGACATAAGGTTCGCAACGAGGCAGTAAAGACGAGGAAGAGGAGACAATTCAGCAATCATGAAGCTCGAGAGAGAGCGTGTGATCATGAGGAAAATGGAATTAAAAGAAGGAAAGCACTTGAGAGAGACAAATGCTTTCGAAGAACACAAGCATGGAAGATGTGAAAGATTTGGCGGAAGCGGCAGCAAGCTTAGCAAAAGGACAACCATGATAGTAGTGTGTGCCAAGGGAGGATGGGTACACGAAAGTATAAACAAATAGGGAGACAAATGGTTGCCGGAGATCATCAACGGCGAAGAATGCACTAGTAGATGGAGAGGTAGGCTTGGGGAAGACGCTGCTGGGGAAGAAGGGGAGAGATTCCTTACCCACGTGAAGTGTGAGAATGTGGGGCCATGGTCATGGAAAAAATGCGACTTAACTTCAGGTGGAAGTTTTGGGCTAATTTTACATAAAAGACGGAAGGCCCATTTCTTTTTGGAGCTAAATAATGAAGCAGCAAGTTGTTGAGCCATGGCCTGGGCTAGCTCATTATGCTTGGTTCCCAACCACAATAGCCCACTGCCTAAGCTACTACAGTACAGTTGCTGATCTCTGTGTGCTATAAAATTAAAAAAAAAATCCTTCAATTTGTATCCACACCTTGAGGGCAAGGTGTGTTTTAGGGGCCGGTAAAGTTAGGAATGGTATTAGTTAGAGGGATATTAAGGGTATACTAGTAAATAGTTAAGTAGTTTGTTAGGGAAGGTTGGTTATAAATACAGTGGGTAGGAAAGATGGGGGTAAGCAATATTTTCGAATATGAAGTAGGGGCTTGAGAGTATCTCAAGATTGGAAGGGTCCAAGTACCTTGAACACTTGGTTTTTCGTGTATTTTTTTATCGTTTATCTTTCAATATATTCGGGTTCTATCAATTGTTAGGTACTTAAGCACCTTGGAGAACCACACCCCAAAAGCTAGCTATTGAGGTGGGAGAGCCAAGCCACTTAAATACCACATTGGTCATCCCATTCTAACCAATGTGAGACAAAGGTAGCCTATACTACCTTGTTTCCTAACAATACCCCATTCCCGGAAAGCCGACGTCCGACGGCTACTCCAACGGTACTTAACTCGGCCACACCCAATCCGAACCCTCCACCGATTCCACTCCGGAACATGAACAATTGACTCTGATACTGTTGTTAGGTACTTAAGCACCTTGGAGAACCACACCCCAAAAGCTAGCTATTGAGGTGGGAGAGCCAAGCCACTTAAGTACCACATTGGTCATGCCATTCTAACCAATGTAGGACAAAGGTAGTCCATACTACCTTGGTTCCTAACAGCCTCATTGCAAGATTGAAATCTCAGATTGAAATCTCACAAGTTGTGCTGTGTTAGAGTTAGATTTTGATGGTTTAGTGTTTGGCCCCCTTCCATGTAAAGAGGCTCTTATTCTGACAAATTAGATGGTCAGCTTTAGATTAAGTACTCTTCTCAATAACTAGTCTGTGAAGAAAATATTCACGAGAATTGCGAGAATCACTAGCATCAATGGGGGATTACATTTTTACCTTTTACCATCCCCCCACCTCTTCTTTAAAGATATTCCCCCATCTTATGATTGTCTGGTGTAGCTAACTTAATTGGAAGAACTTACGTTTCTTCTTTCCAGAAGGTGAAGGGCTCTTGAGGTCAAACTCCCTTTATTCATTAGCTCGTTGAAAAGCCTTGCAGAAAAGGCATCTCTTGTGCTATTTTGACATATTTGTCTCGAAGGATCGATTTGCGACTAAAGCCAAGGAAAATTTGCCATTGGGTGGTCTCTCTCTCTCTCCCCCTCTCTCTAGAGGTGTACATGGGTTGGGTTGAGGATGTTTTTTGGACCAACCCAATAGGTTGGCAATCCAAAAGACCCAAATAAAGTCTCCAACCCTTAAAATTCGGGTTGGGTTGGGTTGTCGGGTTATAACTTATTTTTTTTCCTTTTTAATTAAAAGTATGTAAGTTTATCTACAACACATGACTAATAACTAAAATATCACAACATTTTAAAAGAAAATATTAAAAATTCACAAATTAATCAATACAAAGTGATCAATCTTTAAACAAAGAGAAACATATATATATATATATATATATATATATTATTAATATATACAGAATTTGGCCACTCAACCTAACCCAACAAAAATAGAAAAAATTGAACCCAACCCAAGAACAAAAAGGTTGGGTAGTCCGGGTTGTCGGATCATTTGAACGCCCCTTCTCTCTCTCCCCAAATAAACCACTGGCTAGGAGGGAGATTTGTTGAAGCCTATTATTCTCAATGAAAGGTTGTCTCATAAAGGAAATTTGATATTTTATTTTTATTCAAAAAATAAAAGAAAATATGAACCCCTATTTCTGTCATCTCTTACAAAAGCTCTACTTTTTTTTTTCTTAAAATTTTAATTTCCCCATCGTTCATAAACTATACCTTTTCGTATGGAAAAAATGTTACTTGTGTTTTTTTATAGTGTACTCCACCAAAAAAAGGGTTCTCCCTTGCCCAAAGGGCCATTACATATTTTTGTATGCACGCTGTAGATTCTTTATTCGCTCTATGAAGGTTTGTATTTTCAATAAAAAAGGGATATTATGTATCATGCGATTTGATAACACTAGCCTAGGCACGATATATGCCTCCAAACTTTGTCATCGGGTGTTCACCTCAATTGTCTGAGAGCTAGGATTATACAATCCAAGAAACTGAAAACAAAACTGTAAAACACAATCATCCTTTATCAATTTTGTAATTACTCTTTACCTTTCCTTGAGGGTGGTGTCCTTTTGGGGGCATGGTTTTTTGTATGCCCTTGTAATTTTTTATTTTTTTCTCAATGAAAATGGTTGTTTTTACATTAAAAAACAAATAACACAAGTGAACAAATAGAAAACAGCTATATCAGCTACAATAGTTCAAAGGTATGGCGATAAGAGATGTACTTGCCTCAATCCCTTGTATGTGGGCATGCAGCTTTGTTCTGGTGAGTTTTATCACCATTACTTTATCAACGTTGCTTCCAAAACAAAATTTGATTCTAGAAATATGATTGTGTGGTTGAATTACAACCAAGGTTCATAAAATTCTTGGTCTTTTTTCCTACTTTGTGTTAGACATAGAGGTTAGAGGGAGATGGTCAAGGAGTTCCTTCTGCATCCACCTTTTTGAGGGACGGGGAAGTATCTATGAAATGGGATTTGTGCTGTGTTGTGGATTTGTGGGCTGAGAGGAATAATAGGATCTTTAGACAGATTGAGAGTGACCTAGTGATGTTTGGTTCTCTGTCAGATTCTTTGTTTAATTGTTTCCCTTTGGGGATAGAGACTTTTTGTTATTATCTTTTAGGTTTTGTTCTACTTCATTGGGGCCCTTCCTTTTGTGGGCTTGATGTTTTCTTGAAAATTCAGTTTATTTTTTTATTTTTATTTTTATTTTTTTATTTTTTTATGAAGGGAAACACTTTTCATCGATAAAATGAAAAGAGACTAATGCTCAAAATACAAGGATACAAACCAAAAGGCAAAAAAATTGATAAAGTACAAACCCGAAATTCAGTTTTTTATCAGAAAAAAAATGGTCCGAGACCTTTCATTCAACAGGACCTTATTGCTAACTTTATTATTATTGATGAGTTAGATGCAAAAATGATAATGAGAATGTAAAGCATCTCTTCTTAATTGAAGGATGTAGTATAGTTTCATTCTTGAGTTTTGCGTTTTATCTGATCATCTTAGAGAAGCATGCTTGTTCTAATTCACTAACCTCTTTCTCGTGCTAATACATGATAAAAATGGCCTAAAGGCTAAAGCTAAAAGTACATGGCAATAGCTGGATAATATAAGTTTTATCTTTTACCTCAACTATATTGATGACTATTAACTTCAAGCCTTGAGTTCAGCCAGCAGGTCCAAGTAACTAATAATGTCCTGAGATAATAATACTTTTCCTCCTATAGTCAATGGTATATGAGTACTCTCTGAATGTTCCCTTACTCATCTAGATTTGATGTGCAGATGAGATGCCATTCTATGCCGGTGCAGACGAGAGAATGGTGGAATTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCTCTAGAGGGAGTGGTGGGCCACCTAAGGAAGTTTTTAGTTGATCACAGTGTTCTTCCTCTGTTTGAAAAGAGTGTAAGTTTTTTTCTTATTAGTCTATGACCAACCTTTTCAAGGACTCCTAGTGAATTTTTATTTTTATTTTCTTTATTTTTTATTTTTTACTTTTTCAGTTTAATACACCTACCTCACAAGATCGGCAAACAGAGACCTGGGCTGACAAGTCCTCACTTCTCACTGCATCTCAAAGTGTAATCTCCGCCGAGTATCCTCCGTCTACAAAAAGAGAATCTCTATTTCTTGACCGGGAAACTCATCTTGATTCTCATATTCCATCATCTGGTATTTCTCTATATGGGCAAGATCGAGTACTTCCTACAATTCGATCATCAGGTGTTGGTCGCTCTGGGGGACCTATTGTAACTCAGGTGGGTATATGAAGCTCATTTATCCAGTTATTGGTAGAAGGAAATGGTCTATGTTGACTTAGTGAGGTATCAAACAATCCCACCTACTGGCCTCTATAATCATTAACATCAATTCATCATTCCATGCCTCTTACTATAGTTAGGTGATTAGTTTTTTGTCGTCAGGTCAAGGCAAGCTAGAAGCTTGTCTGCTTTACATTTCCTTCGTGTCTTGGAAACACTAGGTCCAAAATGTTTGGCATATTACATACAAGTATGATTTAGATTTTAACATAATGCTGAATGGAGGCAGTGAGAACAGAGTAGTTTTAGAGTGTCTTTGTAGTTTGTTATTTCTGATCTAGTTACCTCTTTGGCTCCTGTCAGGTTACTCAGACAATGCAGATCCCGTTATCTTATGCTGAGGATATCATTGGGGTAGGAGGAACAAATATTGCATTCATCCGTCGCAATAGTGGTGCCATCTTAACCATACAAGAGAGCAGGGGATTACCCGATGAGATCACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAACAATTAATTCAGGTAAATAACTTATAACTTCGTGATTAAGAGCTTGTTTGTGGTCCGTAGAGTTGTAATTTTGTGATTCTATCATTGGCTAAACCTTTAGCCTCGTTACACTAGCTAGTTTTAGGTATCATTGTGGATCACTAGATTCAAGGAAAAAGATCTTTTTTTATCCCCCAACCAAAAAAGAAAAAAAAAAGGAAAGAAAAAAAGCAAGCACTATATTATGTTATAAACCACCATGAGTTGACTTAGTGGTAAAAAAGAATAAATGGCTAAGAGGTCATGGGTTGTTCAATCCATAGTGACCACCTACCTAGGAATTAATTTCCTACGAGTTTTCTTGACACTCAAATGTTGTAGGGTCAAACGGGTTGTCCCGTGAGACTAGTTGAGGTGCGCGTAAGTTAGTCTGGACACTCACACATATATATATATATATATGTATCACGATATTGTATATAAATATGTCTCTGTTGATGAACAAAAATTAAGGTAATGTTTAGATATTAATGATTATTTATGCCATGTAGGAAGCAGTAAGTGCCCCGAAGGAAGCAGTTACAAGCAGCAGCTATGGCAGGCTAGACACAGCAGGGTTGAGGTCATCGTACTCCCAGTTGGCTGCTTCAGGTTCATCCTATACTTCATCTTCTTTATCTTCACAATCATATGGTGGATATGGGTCTTCTGGTTTAGGAGGCTACAGTACCTTCAGGCTCTGAATTTGATTGATCTGCAGAGATTCATATCCACTCGGATTTGATCCACTTTGGATTCATTAATTCTTGCTAAGAGAATGAATGAATTATGTTGGAATCTAGTTGTTGTAAAGTCAGCCTAAAGTAGTTAAAAACGTTTTTTTTTACCCTCTCTGGCATATTCAAACTCATTCAGCTGGGTAGATTTGTCTTGTGTCTTCCCTTTTTTTTTTTTTCAGTGCTAAATGTGTTTGTTTCTTAGGTTTTTTTCCCCCTTTTTTCTTTTTATATCTTTTTTATGTCAACCGCTTCAGGTCATCAAGTTTTCAGGTGAACCTTTTCTTATTTTTCACTTATTTAGGAGGATTCAGATTAACTTAACTATTGAAATTCTGGAGTGCATCTTAGAATTATTCTTGAGTTGATAGATTGGTAAATGGACTGCTGAATTCAACCCCCATAATGAGGAAAGTGAAATTTTGGAGGGGTGGGGGTGAGAGTATTTTAGTCTAAACCAAAATTAAAATAGAATCCAACCTTTAAGAAAATATTGATATATTCCAAACTCTCCAAACATTAAAAATTAAAAAAAAAAAAATTAAATTCAAGCCATCTAAGGATGATATCAAATTAAGAAAAATTGTTACATTCATATTCAATTCCATATTAAATGAGTGAAACTGAGAATGAAAACGTTCAACAAATAATGTAGAAAAAGTTATTATTGAAAAAACTGATTGAAATATAGCTCTAATTGTATAATATATACATAAAAAAAAGTTGGAAAAAGAAAAAGAAAAAGTTAGCATACATATACTCATTCAAAATACAAACAACTTCTGAAACTTAGACCAAACAACCAAACAACTCTAACATAAACACAAGCTTCTTAGACTATCAATTCAGTATCCCAAATGCAGGAATTTTTTAACTCTAGACTGATTAACTCTCCAAATTTAATAACTCAACTTATTGTTCTAATCTCCTTTCAATCTTTGTTAATTAAAATGATTTAAACTAAAATTAATAATTATATAAATAAAAGTAAGCTTTTTATAGTTTAAATCTATTTTGTATGGTTCTGGCTCTGTATGGTTTTAAATTATGTAAATTTTGTAATTATTAGTGACATGTTCTGTAAATTAAAGATTTAACAAATAGAAAAAATAGTAAAAGAAAAAAAAAACTCCCTTGGTCATTTTTTTCCAATTTTTGTAGAGCCTTTGGTTTTTACGGTCTCATTGGATAATATTTTTGTTTTCTGTTTCCTATTTTTTTTAAGAACTAAAAATTAGAATATGTTTGACAACTATTTATGTTTCATGTTTCTTGAAGGAAAAAAAAAAAAAATAGAAACTTGTTTGATAACTATTTTTTGTTTTTTGTTTGGCTTTTCTTTTCTGCTTTTGTAATTTAAACATAATTTAATTATATAATATAAAAGTACATAATATGCTTCAAAACATATTAAAAGGAAATTATCCAAAGCTTACATTAATTAATACAAATTAGTTTCAATGCAAAATTAACCGTAATTATAGAATTGTATTTATCCTTCAAATGTTCCTCAAATTTGTAATGTTAAAATTCATTTGAGTCATTTGTCTCAAATGGTATTGACTCAAATTCAACTTAATTATATTGCTATGTAAATGTTACGGTAGAAAATGTTAAAGTTTATATATTGCAAAATTAAAAGTCGAAATGAGCATATAACTTGATGGATACAAAGCTTTTACGTGCGACTTAAAAGTTAGAGGATTAATTTTTCTCCCACCCCACTTGTAGAAAAAATAAAAATTAAAATGATGTAAAACATATATTTCAAATTTCAAATTCCAAATTTATAATTCATATAGTATATAAATATTCAATATTGAAAATTAAGAAGTTAAGATAAATTAAAATAATATATAATTACAACAGATTGCAAAAATAAGAATTCAAGCAATATATAAATGCACATATGGCAAAATAAAAATAATAAAATAGATAAGAAATGCAACCAAGTTTCGAACCCACGAACTGGAGTCACTAGGACGAGCACAAGTGCCAAAACCATAAGACTGCATTTCTCTTTTATATTGTGATAATAATATATAAAAACAAACAGAAGCTACTTGGTCCACTTTTAACAATGTTTATTTCAAATCCAGAAACAAAACACAAAAAAGGGGAGATTTTTTTTAATTGTTTTACAAAAAGAAAAAAATTAATAAAAACAAAATCGGTCACCATTAAAAGGCCCTATGGCCAACAATGAAAGAAAAACCGCCAAATTTTTTACAAACCTAAAGAGGGAAGTGATGAAGCCATAATGCGCTCAATCCCGAGAATCCCAAACGAGCTAGCAAATGAGTTGATTGGTTTGAATGACAAGGCACAAACTGAAAAGTAATTTAAGTAAAGGAGAATATTCGTAGTATAATTGGCCACATCTACATGTATAGTTGCTTGACCCTTGAGCATTTGAACCTACCATTAAAGAGTCTGATAACACCATCACCCGAGTGAGACCTAACCGCTCCACTAAACATAGACCTTTAAAATTTACAAATACTTCAACACACACAAGGTTCAAAGATATCTCCTTAAACTTATGCACAACCATTGGGATGGAGCCTGTTAAGGACCCAACAATCCCGTCGAACCCAACTCTATTAATCCCCTCTAAACAAGCTGTATCCACTTGGGCAATACTTAATCCATCCTCCAAGAAAACCATACGAAGGAGAATCCTTCAGAATAGGAGTCAAAGACTCCTTCGACAATGAACTAACTTCTGCCACATAATCTAGGAATACAAGCTCTAGCAAGCTCCTCATTGCTCAGATGATCAAACAACATCAACCATGTATTCGAACAATTAAGACGTTCAAATTTAGAATTCCACACTGCTAAAAAAAGTTTGTTCCATATATACTTAGCTCAATAATACACAAATAAAGTGTGAGCGCCTGTTTCCTCCTTACATTTATAGTTTGGACACCAAGGATTCACATCTACTTTCCTTCTTCTAAGAGAGACTATAGTGGAAATTTAGTTATGACACAACCTCTAGACAAAAAGAGCAACCTTACTTTGAATTTGTAGCTTCCAGTACCTTTTTCTACCA

mRNA sequence

ATGTTACTCTCTCTCTCTCTCTCTCGGTTTTACTCAGCCGACAGCACCTCTCTAACTTGTTTCTCTCTCAGCTACTCCTCCTCACATCGCCGCCGTTGCTGCTGTGCCGCCGCCATCGGATCTCCCTCTCGAACGCTGCTACCACCGCCGCTGCCGTCGTCGGATTTCTCTCTTCACCGCCGCCGCTGTCTTTTACTGCAATTCAGTCGGGAGAATGGCTCCACTGATGCCAACGCCCTCAATTCCAACCCCCAAACTTCAACACTTTCCTCTCTAGCTGCTGCAGAACCAGACTCTACCGAAGCTGGTGGCGCTGATTCCGACATCGATCCTTCTAACCAAGACTACTTATCCGTTCCGGCTTCGGATTCTGCAGCTCATGAAGGCCCCAATCATACTGGCGCTTCCGATAAAAAGTGGCCCGGATGGCCTGGAGACTGCGTCTTCAGGCTTATTGTGCCGGTTGTTAAAGTCGGCAGCATTATTGGGCGTAAGGGCGATCTTATTAAGAAGATGTGTGAGGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTTGTGCTGATTTCAGGAAAAGAAGAGCTTGAGGCACCCCTTTCCCCTGCTATGGATGCAGTTATAAGAGTCTTCAAACGTGTGTCAGGGTTATCTGAGAATGAAGATGAGGCTAAGGCCTCATTTTGTTCAATTCGGCTACTGGTGGCATCAACTCAAGCAATCAATTTAATTGGAAAGCAGGGTTCATTAATTAAATCTATACAGGAGAGTACTGGAGCCTCTGTAAGAGTATTATCAGGAGATGAGATGCCATTCTATGCCGGTGCAGACGAGAGAATGGTGGAATTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCTCTAGAGGGAGTGGTGGGCCACCTAAGGAAGTTTTTAGTTGATCACAGTGTTCTTCCTCTGTTTGAAAAGAGTTTTAATACACCTACCTCACAAGATCGGCAAACAGAGACCTGGGCTGACAAGTCCTCACTTCTCACTGCATCTCAAAGTGTAATCTCCGCCGAGTATCCTCCGTCTACAAAAAGAGAATCTCTATTTCTTGACCGGGAAACTCATCTTGATTCTCATATTCCATCATCTGGTATTTCTCTATATGGGCAAGATCGAGTACTTCCTACAATTCGATCATCAGGTGTTGGTCGCTCTGGGGGACCTATTGTAACTCAGGTTACTCAGACAATGCAGATCCCGTTATCTTATGCTGAGGATATCATTGGGGTAGGAGGAACAAATATTGCATTCATCCGTCGCAATAGTGGTGCCATCTTAACCATACAAGAGAGCAGGGGATTACCCGATGAGATCACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAACAATTAATTCAGGAAGCAGTAAGTGCCCCGAAGGAAGCAGTTACAAGCAGCAGCTATGGCAGGCTAGACACAGCAGGGTTGAGGTCATCGTACTCCCAGTTGGCTGCTTCAGGTTCATCCTATACTTCATCTTCTTTATCTTCACAATCATATGGTGGATATGGGTCTTCTGGTTTAGGAGGCTACAGTACCTTCAGGCTCTGAATTTGATTGATCTGCAGAGATTCATATCCACTCGGATTTGATCCACTTTGGATTCATTAATTCTTGCTAAGAGAATGAATGAATTATGTTGGAATCTAGTTGTTGTAAAGTCAGCCTAAAGTAGTTAAAAACGTTTTTTTTTACCCTCTCTGGCATATTCAAACTCATTCAGCTGGGTAGATTTGTCTTGTGTCTTCCCTTTTTTTTTTTTTCAGTGCTAAATGTGTTTGTTTCTTAGGTTTTTTTCCCCCTTTTTTCTTTTTATATCTTTTTTATGTCAACCGCTTCAGGTCATCAAGTTTTCAGGTGAACCTTTTCTTATTTTTCACTTATTTAGGAGGATTCAGATTAACTTAACTATTGAAATTCTGGAGTGCATCTTAGAATTATTCTTGAGTTGATAGATTGGTAAATGGACTGCTGAATTCAACCCCCATAATGAGGAAAGTGAAATTTTGGAGGGGTGGGGGTGAGAGTATTTTAGTCTAAACCAAAATTAAAATAGAATCCAACCTTTAAGAAAATATTGATATATTCCAAACTCTCCAAACATTAAAAATTAAAAAAAAAAAAATTAAATTCAAGCCATCTAAGGATGATATCAAATTAAGAAAAATTGTTACATTCATATTCAATTCCATATTAAATGAGTGAAACTGAGAATGAAAACGTTCAACAAATAATGTAGAAAAAGTTATTATTGAAAAAACTGATTGAAATATAGCTCTAATTGTATAATATATACATAAAAAAAAGTTGGAAAAAGAAAAAGAAAAAGTTAGCATACATATACTCATTCAAAATACAAACAACTTCTGAAACTTAGACCAAACAACCAAACAACTCTAACATAAACACAAGCTTCTTAGACTATCAATTCAGTATCCCAAATGCAGGAATTTTTTAACTCTAGACTGATTAACTCTCCAAATTTAATAACTCAACTTATTGTTCTAATCTCCTTTCAATCTTTGTTAATTAAAATGATTTAAACTAAAATTAATAATTATATAAATAAAAGTAAGCTTTTTATAGTTTAAATCTATTTTGTATGGTTCTGGCTCTGTATGGTTTTAAATTATGTAAATTTTGTAATTATTAGTGACATGTTCTGTAAATTAAAGATTTAACAAATAGAAAAAATAGTAAAAGAAAAAAAAAACTCCCTTGGTCATTTTTTTCCAATTTTTGTAGAGCCTTTGGTTTTTACGGTCTCATTGGATAATATTTTTGTTTTCTGTTTCCTATTTTTTTTAAGAACTAAAAATTAGAATATGTTTGACAACTATTTATGTTTCATGTTTCTTGAAGGAAAAAAAAAAAAAATAGAAACTTGTTTGATAACTATTTTTTGTTTTTTGTTTGGCTTTTCTTTTCTGCTTTTGTAATTTAAACATAATTTAATTATATAATATAAAAGTACATAATATGCTTCAAAACATATTAAAAGGAAATTATCCAAAGCTTACATTAATTAATACAAATTAGTTTCAATGCAAAATTAACCGTAATTATAGAATTGTATTTATCCTTCAAATGTTCCTCAAATTTGTAATGTTAAAATTCATTTGAGTCATTTGTCTCAAATGGTATTGACTCAAATTCAACTTAATTATATTGCTATGTAAATGTTACGGTAGAAAATGTTAAAGTTTATATATTGCAAAATTAAAAGTCGAAATGAGCATATAACTTGATGGATACAAAGCTTTTACGTGCGACTTAAAAGTTAGAGGATTAATTTTTCTCCCACCCCACTTGTAGAAAAAATAAAAATTAAAATGATGTAAAACATATATTTCAAATTTCAAATTCCAAATTTATAATTCATATAGTATATAAATATTCAATATTGAAAATTAAGAAGTTAAGATAAATTAAAATAATATATAATTACAACAGATTGCAAAAATAAGAATTCAAGCAATATATAAATGCACATATGGCAAAATAAAAATAATAAAATAGATAAGAAATGCAACCAAGTTTCGAACCCACGAACTGGAGTCACTAGGACGAGCACAAGTGCCAAAACCATAAGACTGCATTTCTCTTTTATATTGTGATAATAATATATAAAAACAAACAGAAGCTACTTGGTCCACTTTTAACAATGTTTATTTCAAATCCAGAAACAAAACACAAAAAAGGGGAGATTTTTTTTAATTGTTTTACAAAAAGAAAAAAATTAATAAAAACAAAATCGGTCACCATTAAAAGGCCCTATGGCCAACAATGAAAGAAAAACCGCCAAATTTTTTACAAACCTAAAGAGGGAAGTGATGAAGCCATAATGCGCTCAATCCCGAGAATCCCAAACGAGCTAGCAAATGAGTTGATTGGTTTGAATGACAAGGCACAAACTGAAAAGTAATTTAAGTAAAGGAGAATATTCGTAGTATAATTGGCCACATCTACATGTATAGTTGCTTGACCCTTGAGCATTTGAACCTACCATTAAAGAGTCTGATAACACCATCACCCGAGTGAGACCTAACCGCTCCACTAAACATAGACCTTTAAAATTTACAAATACTTCAACACACACAAGGTTCAAAGATATCTCCTTAAACTTATGCACAACCATTGGGATGGAGCCTGTTAAGGACCCAACAATCCCGTCGAACCCAACTCTATTAATCCCCTCTAAACAAGCTGTATCCACTTGGGCAATACTTAATCCATCCTCCAAGAAAACCATACGAAGGAGAATCCTTCAGAATAGGAGTCAAAGACTCCTTCGACAATGAACTAACTTCTGCCACATAATCTAGGAATACAAGCTCTAGCAAGCTCCTCATTGCTCAGATGATCAAACAACATCAACCATGTATTCGAACAATTAAGACGTTCAAATTTAGAATTCCACACTGCTAAAAAAAGTTTGTTCCATATATACTTAGCTCAATAATACACAAATAAAGTGTGAGCGCCTGTTTCCTCCTTACATTTATAGTTTGGACACCAAGGATTCACATCTACTTTCCTTCTTCTAAGAGAGACTATAGTGGAAATTTAGTTATGACACAACCTCTAGACAAAAAGAGCAACCTTACTTTGAATTTGTAGCTTCCAGTACCTTTTTCTACCA

Coding sequence (CDS)

ATGTTACTCTCTCTCTCTCTCTCTCGGTTTTACTCAGCCGACAGCACCTCTCTAACTTGTTTCTCTCTCAGCTACTCCTCCTCACATCGCCGCCGTTGCTGCTGTGCCGCCGCCATCGGATCTCCCTCTCGAACGCTGCTACCACCGCCGCTGCCGTCGTCGGATTTCTCTCTTCACCGCCGCCGCTGTCTTTTACTGCAATTCAGTCGGGAGAATGGCTCCACTGATGCCAACGCCCTCAATTCCAACCCCCAAACTTCAACACTTTCCTCTCTAGCTGCTGCAGAACCAGACTCTACCGAAGCTGGTGGCGCTGATTCCGACATCGATCCTTCTAACCAAGACTACTTATCCGTTCCGGCTTCGGATTCTGCAGCTCATGAAGGCCCCAATCATACTGGCGCTTCCGATAAAAAGTGGCCCGGATGGCCTGGAGACTGCGTCTTCAGGCTTATTGTGCCGGTTGTTAAAGTCGGCAGCATTATTGGGCGTAAGGGCGATCTTATTAAGAAGATGTGTGAGGAAACTAGGGCTAGAATTCGTGTTCTTGATGGTGCTGTTGGCACTCCTGATCGCGTTGTGCTGATTTCAGGAAAAGAAGAGCTTGAGGCACCCCTTTCCCCTGCTATGGATGCAGTTATAAGAGTCTTCAAACGTGTGTCAGGGTTATCTGAGAATGAAGATGAGGCTAAGGCCTCATTTTGTTCAATTCGGCTACTGGTGGCATCAACTCAAGCAATCAATTTAATTGGAAAGCAGGGTTCATTAATTAAATCTATACAGGAGAGTACTGGAGCCTCTGTAAGAGTATTATCAGGAGATGAGATGCCATTCTATGCCGGTGCAGACGAGAGAATGGTGGAATTGCAGGGAGAATCCTTAAAGGTTCTCAAGGCTCTAGAGGGAGTGGTGGGCCACCTAAGGAAGTTTTTAGTTGATCACAGTGTTCTTCCTCTGTTTGAAAAGAGTTTTAATACACCTACCTCACAAGATCGGCAAACAGAGACCTGGGCTGACAAGTCCTCACTTCTCACTGCATCTCAAAGTGTAATCTCCGCCGAGTATCCTCCGTCTACAAAAAGAGAATCTCTATTTCTTGACCGGGAAACTCATCTTGATTCTCATATTCCATCATCTGGTATTTCTCTATATGGGCAAGATCGAGTACTTCCTACAATTCGATCATCAGGTGTTGGTCGCTCTGGGGGACCTATTGTAACTCAGGTTACTCAGACAATGCAGATCCCGTTATCTTATGCTGAGGATATCATTGGGGTAGGAGGAACAAATATTGCATTCATCCGTCGCAATAGTGGTGCCATCTTAACCATACAAGAGAGCAGGGGATTACCCGATGAGATCACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAACAATTAATTCAGGAAGCAGTAAGTGCCCCGAAGGAAGCAGTTACAAGCAGCAGCTATGGCAGGCTAGACACAGCAGGGTTGAGGTCATCGTACTCCCAGTTGGCTGCTTCAGGTTCATCCTATACTTCATCTTCTTTATCTTCACAATCATATGGTGGATATGGGTCTTCTGGTTTAGGAGGCTACAGTACCTTCAGGCTCTGA

Protein sequence

MLLSLSLSRFYSADSTSLTCFSLSYSSSHRRRCCCAAAIGSPSRTLLPPPLPSSDFSLHRRRCLLLQFSRENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVTSSSYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL

Homology

[Close]

BLAST of CmUC11G215360 vs. NCBI nr
Match: XP_038890982.1 (RNA-binding KH domain-containing protein PEPPER-like [Benincasa hispida])

HSP 1 Score: 858.6 bits (2217), Expect = 2.9e-245
Identity = 452/466 (97.00%), Postives = 459/466 (98.50%), Query Frame = 0


Query: 71  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGP 130
           ENGSTDANALNSNPQ+STLSSLAAAEPDSTEAGG +SDIDPSN+DYLSVPASDSAA+EGP
Sbjct: 8   ENGSTDANALNSNPQSSTLSSLAAAEPDSTEAGGTESDIDPSNEDYLSVPASDSAAYEGP 67

Query: 131 NHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTP 190
           NHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTP
Sbjct: 68  NHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTP 127

Query: 191 DRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLI 250
           DRVVLISGKEEL+APLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLI
Sbjct: 128 DRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLI 187

Query: 251 GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF 310
           GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF
Sbjct: 188 GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF 247

Query: 311 LVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRET 370
           LVDHSVLPLFEKSFNTP SQDRQ +TWADKSSLLTASQS+IS EYPPSTKRESLFLDRET
Sbjct: 248 LVDHSVLPLFEKSFNTPASQDRQMDTWADKSSLLTASQSIISTEYPPSTKRESLFLDRET 307

Query: 371 HLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTN 430
           HLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTN
Sbjct: 308 HLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTN 367

Query: 431 IAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVTSSSYGR 490
           IAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKE VTSSSYGR
Sbjct: 368 IAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPVTSSSYGR 427

Query: 491 LDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 537
           LD  GLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL
Sbjct: 428 LDATGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 473

[Close]

BLAST of CmUC11G215360 vs. NCBI nr
Match: TYK03085.1 (RNA-binding KH domain-containing protein PEPPER [Cucumis melo var. makuwa])

HSP 1 Score: 821.6 bits (2121), Expect = 3.9e-234
Identity = 439/466 (94.21%), Postives = 448/466 (96.14%), Query Frame = 0


Query: 71  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGP 130
           +NGSTDA A   NPQ+STL SLAAAE DSTE G  DSDIDPSNQDY S+P SDSAAHE  
Sbjct: 8   DNGSTDAIA---NPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSDSAAHEPS 67

Query: 131 NHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTP 190
           +HTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTP
Sbjct: 68  SHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTP 127

Query: 191 DRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLI 250
           DRVVLISGKEEL++PLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVASTQAINLI
Sbjct: 128 DRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVASTQAINLI 187

Query: 251 GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF 310
           GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF
Sbjct: 188 GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF 247

Query: 311 LVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRET 370
           LVDHSVLPLFEKSFNTP SQDRQTETWADKSSLLTASQS+ISAEYPPSTKRESLFLDRET
Sbjct: 248 LVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFLDRET 307

Query: 371 HLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTN 430
           HLDSHI SSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTN
Sbjct: 308 HLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTN 367

Query: 431 IAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVTSSSYGR 490
           IAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKE VTSSSYGR
Sbjct: 368 IAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSSSYGR 427

Query: 491 LDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 537
           LDT GLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 428 LDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 470

[Close]

BLAST of CmUC11G215360 vs. NCBI nr
Match: XP_004149510.2 (RNA-binding KH domain-containing protein PEPPER isoform X1 [Cucumis sativus] >KGN61176.1 hypothetical protein Csa_021288 [Cucumis sativus])

HSP 1 Score: 818.5 bits (2113), Expect = 3.3e-233
Identity = 438/466 (93.99%), Postives = 444/466 (95.28%), Query Frame = 0


Query: 71  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGP 130
           ENGSTDA     NP +STL SLAAAEPDSTEAG  DSD DPSNQDY SVP SDSAAHE  
Sbjct: 8   ENGSTDA---IPNPLSSTLPSLAAAEPDSTEAGDDDSDSDPSNQDYSSVPPSDSAAHEPS 67

Query: 131 NHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTP 190
           NHTG SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTP
Sbjct: 68  NHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTP 127

Query: 191 DRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLI 250
           DRVVLISGKEELE+PLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLI
Sbjct: 128 DRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLI 187

Query: 251 GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF 310
           GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF
Sbjct: 188 GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF 247

Query: 311 LVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRET 370
           LVDHSVLPLFEKSFNTP SQDRQTETWADKSSLLTASQS+ISAEY PSTKRESLFLDRE 
Sbjct: 248 LVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRESLFLDREA 307

Query: 371 HLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTN 430
           H DSHI SSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTN
Sbjct: 308 HFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTN 367

Query: 431 IAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVTSSSYGR 490
           IAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKE VTSSSYGR
Sbjct: 368 IAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSSSYGR 427

Query: 491 LDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 537
           LDT GLRSSYSQLAASGSS+TSSSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 428 LDTTGLRSSYSQLAASGSSFTSSSLSSQSYGGYGSSGLGGYTTFRL 470

[Close]

BLAST of CmUC11G215360 vs. NCBI nr
Match: XP_022996845.1 (RNA-binding KH domain-containing protein PEPPER-like [Cucurbita maxima])

HSP 1 Score: 802.4 bits (2071), Expect = 2.4e-228
Identity = 427/467 (91.43%), Postives = 443/467 (94.86%), Query Frame = 0


Query: 71  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAH-EG 130
           +NGSTDANALN NP++S L+S+AAAEPDS EAGGA+SD+DPSNQDYLS PASDSA H E 
Sbjct: 8   DNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASDSADHDES 67

Query: 131 PNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGT 190
           PNHT ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGT
Sbjct: 68  PNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGT 127

Query: 191 PDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINL 250
           PDRVVLISGKE+ EAPLSPAMDAVIRVFKRV   SENEDEAK SFCSIRLLVASTQAINL
Sbjct: 128 PDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVASTQAINL 187

Query: 251 IGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRK 310
           IGKQGSLIKSIQESTGAS+RVLSGDEMPFYAGADERMVELQGESLKVLKALE VVGHLRK
Sbjct: 188 IGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKVLKALEAVVGHLRK 247

Query: 311 FLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRE 370
           FLVD SVLPLFEKSFNTP SQDRQ + WADKSSLLTASQSVISAEYP STKRESL+LDRE
Sbjct: 248 FLVDRSVLPLFEKSFNTPPSQDRQMDAWADKSSLLTASQSVISAEYPSSTKRESLYLDRE 307

Query: 371 THLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT 430
            +LDS+IPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT
Sbjct: 308 AYLDSYIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT 367

Query: 431 NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVTSSSYG 490
           NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKE VTSSSYG
Sbjct: 368 NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPVTSSSYG 427

Query: 491 RLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 537
           RL+ +G+RSSYSQL ASGSSYTSSSLSSQ YGGYGSSGLGGYSTFRL
Sbjct: 428 RLEASGMRSSYSQLDASGSSYTSSSLSSQLYGGYGSSGLGGYSTFRL 474

[Close]

BLAST of CmUC11G215360 vs. NCBI nr
Match: KAG7029848.1 (RNA-binding KH domain-containing protein PEPPER [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 802.0 bits (2070), Expect = 3.2e-228
Identity = 426/467 (91.22%), Postives = 443/467 (94.86%), Query Frame = 0


Query: 71  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAH-EG 130
           +NGSTDANALN NP++S L+S+AAAEPDS EAGGA+SD+DPSNQDYLS PASDSA H E 
Sbjct: 8   DNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASDSADHDES 67

Query: 131 PNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGT 190
           PNHT ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGT
Sbjct: 68  PNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGT 127

Query: 191 PDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINL 250
           PDRVVLISGKE+ EAPLSPAMDAVIRVFKRV   SENEDEAK SFCSIRLLVASTQAINL
Sbjct: 128 PDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVASTQAINL 187

Query: 251 IGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRK 310
           IGKQGSLIKSIQESTGAS+RVLSGDEMPFYAG DERMVELQGESLKVLKALE VVGHLRK
Sbjct: 188 IGKQGSLIKSIQESTGASIRVLSGDEMPFYAGVDERMVELQGESLKVLKALEAVVGHLRK 247

Query: 311 FLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRE 370
           FLVD SVLPLFEKSFNTP SQDRQ + WADKSSLLTASQSVISAEYP STKRESL+LDRE
Sbjct: 248 FLVDRSVLPLFEKSFNTPPSQDRQMDAWADKSSLLTASQSVISAEYPSSTKRESLYLDRE 307

Query: 371 THLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT 430
            +LDS+IPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT
Sbjct: 308 AYLDSYIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT 367

Query: 431 NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVTSSSYG 490
           NIAFIRRNSGAILTIQESRGLPDEITVEIKGTS+QVQMAQQLIQEAVSAPKE VTSSSYG
Sbjct: 368 NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSAQVQMAQQLIQEAVSAPKEPVTSSSYG 427

Query: 491 RLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 537
           RLDT+G+RSSYSQL A+GSSYTSSSLSSQ YGGYGSSGLGGYSTFRL
Sbjct: 428 RLDTSGMRSSYSQLDAAGSSYTSSSLSSQLYGGYGSSGLGGYSTFRL 474

[Close]

BLAST of CmUC11G215360 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 1.9e-122
Identity = 256/456 (56.14%), Postives = 326/456 (71.49%), Query Frame = 0


Query: 117 LSVPASDSAAHEG-PNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEE 176
           L+ P S +AA    P+   +++++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKKMCEE
Sbjct: 43  LNQPDSLAAAETTFPDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEE 102

Query: 177 TRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDE----AK 236
           TRARI+VLDG V TPDR+VLISGKEE EA +SPAMDAV+RVF+RVSGL +N+D+    A 
Sbjct: 103 TRARIKVLDGPVNTPDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAG 162

Query: 237 ASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQG 296
           + F S+RLLVASTQAINLIGKQGSLIKSI E++GASVR+LS +E PFYA  DER+V+LQG
Sbjct: 163 SVFSSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQG 222

Query: 297 ESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWAD-KSSLLTASQSV 356
           E+LK+LKALE +VGHLR+FLVDH+V+PLFEK +    SQ RQ E  A+ KSSL T S ++
Sbjct: 223 EALKILKALEAIVGHLRRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL 282

Query: 357 ISAEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVT 416
           +  ++    +RE LFL+R++ +DS +  SG+S+Y QD VL    S G+ R     VTQV+
Sbjct: 283 MEPDFSLLARREPLFLERDSRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVS 342

Query: 417 QTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ 476
           QTMQIP SYAEDIIGV G NIA+IRR SGA +TI+ES   PD+ITVEIKGT+SQVQ A+Q
Sbjct: 343 QTMQIPFSYAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQ 402

Query: 477 LIQEAVSAPKEAVT-SSSYGRLDTAGL---------------------------RSSYSQ 536
           LIQE +   KE V+ S  Y R+D+  +                            ++YSQ
Sbjct: 403 LIQEFIINHKEPVSVSGGYARIDSGYVPAYPPQLSNRQEPLPSTYMGTEPVQYRPTAYSQ 462

[Close]

BLAST of CmUC11G215360 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.2e-71
Identity = 199/518 (38.42%), Postives = 272/518 (52.51%), Query Frame = 0


Query: 42  PSRTLLPPPLPSSDFSLHRRRCLLLQFSRENGSTDANALNSNPQTSTLSSLAAAEPDSTE 101
           P +TL P      D   + +  L  Q + +      + L   PQ      L     D  +
Sbjct: 71  PDQTLEPQQYEVDDQLEYHQYQLQDQANEDVQDHSQDDLQYQPQNQEQFQLQDEAHDQAQ 130

Query: 102 AGGADSDIDPSNQDYLSVPASDSAAHEG-PNH--------------TGASDKKWPGWPGD 161
              A  D+   N D +     D    EG P H               G  +K+WPGWPG+
Sbjct: 131 Y-QAQGDVQDHNGDEVQDKVED---EEGIPEHLESLQKSEPEEDATVGGEEKRWPGWPGE 190

Query: 162 CVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPL 221
            VFR++VP  KVGSIIGRKGD+IKK+ EETRARI++LDG  GT +R V++SGKEE E+ L
Sbjct: 191 TVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSL 250

Query: 222 SPAMDAVIRVFKR-VSGLSENEDEA-KASFCSIRLLVASTQAINLIGKQGSLIKSIQEST 281
            P+MD ++RV  R V GL     +A   S  S RLLV ++QA +LIGKQG  +K+IQE++
Sbjct: 251 PPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEAS 310

Query: 282 GASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSF 341
              VRVL  +++P +A  D+R+VE+ GE   V +ALE +  HLRKFLVD S++P FE   
Sbjct: 311 ACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSIIPFFENQM 370

Query: 342 NTPTSQ-DRQTETWADKSSLLTASQSVISAEY--------PPSTKRESLFLDRETHLD-- 401
             PT Q D               + SV    Y         P  + +S +   E      
Sbjct: 371 QKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHDSYYPPPEMRQPPM 430

Query: 402 SHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAF 461
              P  GIS YG++  +    +  V  +   +  QVTQ MQIPLSYA+ +IG  G+NI++
Sbjct: 431 EKQPHQGISAYGREPPM----NVHVSSAPPMVAQQVTQQMQIPLSYADAVIGTSGSNISY 490

Query: 462 IRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVTSSSYGRLDT 521
            RR SGA +TIQE+RG+P E+TVE+ GT SQVQ A QLIQ  ++   EA   +       
Sbjct: 491 TRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFMA---EAGAPAPAQPQTV 550

Query: 522 AGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGY 532
           A  +  Y+  A  GS Y ++  +    GGY +    GY
Sbjct: 551 APEQQGYNPYATHGSVYAAAPTNPP--GGYATDYSSGY 575

[Close]

BLAST of CmUC11G215360 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 8.7e-19
Identity = 97/390 (24.87%), Postives = 172/390 (44.10%), Query Frame = 0


Query: 146 DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAP 205
           D VF+++      G +IG  G +++ +  ET A I V +      +R++ ++  E  E  
Sbjct: 451 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQ 510

Query: 206 LSPAMDAVIRVFKRVSGLSENE--DEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQES 265
            SPA  A++ +F R+  L+ N+  D    S  + RL+V ++Q   ++GK G ++  ++++
Sbjct: 511 SSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKT 570

Query: 266 TGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKS 325
           TGA++++L  ++ P     ++++V++ GE   V +A+  +   LR  +  +S+     KS
Sbjct: 571 TGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKS 630

Query: 326 FNTPTSQ---DRQTET---------------------WADKSSLLTASQSVI----SAEY 385
            +  T++   DRQ++                         + S L+ S S +    S   
Sbjct: 631 SSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSVNYSRSVGT 690

Query: 386 PPSTKRESLFLDR----------------ETHLDS--HI------------PSSGISLYG 445
            P  + E  F DR                  H D+  H+            P++   L  
Sbjct: 691 DPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPPAAPRGLSD 750

Query: 446 QDRVLPTIRSSGVGRSG--GPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILT 473
               L + R+  V  SG    IVT  T  +++P +    + G  G N+  +R+ SGA + 
Sbjct: 751 ASGGLSSARAGHVLGSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVI 810

[Close]

BLAST of CmUC11G215360 vs. ExPASy Swiss-Prot
Match: P57721 (Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 8.7e-19
Identity = 99/346 (28.61%), Postives = 159/346 (45.95%), Query Frame = 0


Query: 150 RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPA 209
           RL++   +VGSIIG+KG+ +KKM EE+ ARI + +G    P+R+V I+G           
Sbjct: 49  RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG----------P 108

Query: 210 MDAVIRVFKRVSGLSE--------NEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQ 269
            DA+ + F  ++   E        N         ++RL+V ++Q  +LIGK GS IK I+
Sbjct: 109 TDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIR 168

Query: 270 ESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFE 329
           ESTGA V+V +GD +P    + ER V + G    +++ ++ +   + +     + +P   
Sbjct: 169 ESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRP 228

Query: 330 KSFNTP---------TSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRETHL 389
           K  +TP         T Q +      D+ + L    ++    +PP  +    F   +  L
Sbjct: 229 KPASTPVIFAGGQAYTIQGQYAIPHPDQLTKL-HQLAMQQTPFPPLGQTNPAFPGEK--L 288

Query: 390 DSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIA 449
             H      +L GQ        SSG+  S        T  + IP      IIG  GT I 
Sbjct: 289 PLHSSEEAQNLMGQ--------SSGLDAS----PPASTHELTIPNDLIGCIIGRQGTKIN 348

Query: 450 FIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSA 479
            IR+ SGA + I  +     E  + I GT + + +AQ LI   +++
Sbjct: 349 EIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 363

[Close]

BLAST of CmUC11G215360 vs. ExPASy Swiss-Prot
Match: P57722 (Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3)

HSP 1 Score: 96.7 bits (239), Expect = 8.7e-19
Identity = 99/346 (28.61%), Postives = 159/346 (45.95%), Query Frame = 0


Query: 150 RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPLSPA 209
           RL++   +VGSIIG+KG+ +KKM EE+ ARI + +G    P+R+V I+G           
Sbjct: 49  RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG----------P 108

Query: 210 MDAVIRVFKRVSGLSE--------NEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQ 269
            DA+ + F  ++   E        N         ++RL+V ++Q  +LIGK GS IK I+
Sbjct: 109 TDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIR 168

Query: 270 ESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFE 329
           ESTGA V+V +GD +P    + ER V + G    +++ ++ +   + +     + +P   
Sbjct: 169 ESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRP 228

Query: 330 KSFNTP---------TSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRETHL 389
           K  +TP         T Q +      D+ + L    ++    +PP  +    F   +  L
Sbjct: 229 KPASTPVIFAGGQAYTIQGQYAIPHPDQLTKL-HQLAMQQTPFPPLGQTNPAFPGEK--L 288

Query: 390 DSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIA 449
             H      +L GQ        SSG+  S        T  + IP      IIG  GT I 
Sbjct: 289 PLHSSEEAQNLMGQ--------SSGLDAS----PPASTHELTIPNDLIGCIIGRQGTKIN 348

Query: 450 FIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSA 479
            IR+ SGA + I  +     E  + I GT + + +AQ LI   +++
Sbjct: 349 EIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 363

[Close]

BLAST of CmUC11G215360 vs. ExPASy TrEMBL
Match: A0A5D3BVI2 (RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001920 PE=4 SV=1)

HSP 1 Score: 821.6 bits (2121), Expect = 1.9e-234
Identity = 439/466 (94.21%), Postives = 448/466 (96.14%), Query Frame = 0


Query: 71  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGP 130
           +NGSTDA A   NPQ+STL SLAAAE DSTE G  DSDIDPSNQDY S+P SDSAAHE  
Sbjct: 8   DNGSTDAIA---NPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSDSAAHEPS 67

Query: 131 NHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTP 190
           +HTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTP
Sbjct: 68  SHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTP 127

Query: 191 DRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLI 250
           DRVVLISGKEEL++PLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVASTQAINLI
Sbjct: 128 DRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVASTQAINLI 187

Query: 251 GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF 310
           GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF
Sbjct: 188 GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF 247

Query: 311 LVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRET 370
           LVDHSVLPLFEKSFNTP SQDRQTETWADKSSLLTASQS+ISAEYPPSTKRESLFLDRET
Sbjct: 248 LVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFLDRET 307

Query: 371 HLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTN 430
           HLDSHI SSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTN
Sbjct: 308 HLDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTN 367

Query: 431 IAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVTSSSYGR 490
           IAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKE VTSSSYGR
Sbjct: 368 IAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSSSYGR 427

Query: 491 LDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 537
           LDT GLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 428 LDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 470

[Close]

BLAST of CmUC11G215360 vs. ExPASy TrEMBL
Match: A0A0A0LMH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G061550 PE=4 SV=1)

HSP 1 Score: 818.5 bits (2113), Expect = 1.6e-233
Identity = 438/466 (93.99%), Postives = 444/466 (95.28%), Query Frame = 0


Query: 71  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGP 130
           ENGSTDA     NP +STL SLAAAEPDSTEAG  DSD DPSNQDY SVP SDSAAHE  
Sbjct: 8   ENGSTDA---IPNPLSSTLPSLAAAEPDSTEAGDDDSDSDPSNQDYSSVPPSDSAAHEPS 67

Query: 131 NHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTP 190
           NHTG SDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTP
Sbjct: 68  NHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTP 127

Query: 191 DRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLI 250
           DRVVLISGKEELE+PLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLI
Sbjct: 128 DRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLI 187

Query: 251 GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF 310
           GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF
Sbjct: 188 GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF 247

Query: 311 LVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRET 370
           LVDHSVLPLFEKSFNTP SQDRQTETWADKSSLLTASQS+ISAEY PSTKRESLFLDRE 
Sbjct: 248 LVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRESLFLDREA 307

Query: 371 HLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTN 430
           H DSHI SSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTN
Sbjct: 308 HFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTN 367

Query: 431 IAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVTSSSYGR 490
           IAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKE VTSSSYGR
Sbjct: 368 IAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSSSYGR 427

Query: 491 LDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 537
           LDT GLRSSYSQLAASGSS+TSSSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 428 LDTTGLRSSYSQLAASGSSFTSSSLSSQSYGGYGSSGLGGYTTFRL 470

[Close]

BLAST of CmUC11G215360 vs. ExPASy TrEMBL
Match: A0A6J1K7W7 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661 GN=LOC111491969 PE=4 SV=1)

HSP 1 Score: 802.4 bits (2071), Expect = 1.2e-228
Identity = 427/467 (91.43%), Postives = 443/467 (94.86%), Query Frame = 0


Query: 71  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAH-EG 130
           +NGSTDANALN NP++S L+S+AAAEPDS EAGGA+SD+DPSNQDYLS PASDSA H E 
Sbjct: 8   DNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASDSADHDES 67

Query: 131 PNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGT 190
           PNHT ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGT
Sbjct: 68  PNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGT 127

Query: 191 PDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINL 250
           PDRVVLISGKE+ EAPLSPAMDAVIRVFKRV   SENEDEAK SFCSIRLLVASTQAINL
Sbjct: 128 PDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVASTQAINL 187

Query: 251 IGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRK 310
           IGKQGSLIKSIQESTGAS+RVLSGDEMPFYAGADERMVELQGESLKVLKALE VVGHLRK
Sbjct: 188 IGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKVLKALEAVVGHLRK 247

Query: 311 FLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRE 370
           FLVD SVLPLFEKSFNTP SQDRQ + WADKSSLLTASQSVISAEYP STKRESL+LDRE
Sbjct: 248 FLVDRSVLPLFEKSFNTPPSQDRQMDAWADKSSLLTASQSVISAEYPSSTKRESLYLDRE 307

Query: 371 THLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT 430
            +LDS+IPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT
Sbjct: 308 AYLDSYIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT 367

Query: 431 NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVTSSSYG 490
           NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKE VTSSSYG
Sbjct: 368 NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPVTSSSYG 427

Query: 491 RLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 537
           RL+ +G+RSSYSQL ASGSSYTSSSLSSQ YGGYGSSGLGGYSTFRL
Sbjct: 428 RLEASGMRSSYSQLDASGSSYTSSSLSSQLYGGYGSSGLGGYSTFRL 474

[Close]

BLAST of CmUC11G215360 vs. ExPASy TrEMBL
Match: A0A1S4E0X0 (RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo OX=3656 GN=LOC103492560 PE=4 SV=1)

HSP 1 Score: 801.6 bits (2069), Expect = 2.0e-228
Identity = 432/470 (91.91%), Postives = 443/470 (94.26%), Query Frame = 0


Query: 71  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAHEGP 130
           +NGSTDA A   NPQ+STL SLAAAE DSTE G  DSDIDPSNQDY S+P SDSAAHE  
Sbjct: 8   DNGSTDAIA---NPQSSTLPSLAAAEADSTEVGDDDSDIDPSNQDYSSLPPSDSAAHEPS 67

Query: 131 NHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTP 190
           +HTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTP
Sbjct: 68  SHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTP 127

Query: 191 DRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLI 250
           DRVVLISGKEEL++PLSPAMDAVIRVFKRVSGLSENEDEAKASF SIRLLVASTQAINLI
Sbjct: 128 DRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVASTQAINLI 187

Query: 251 GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF 310
           GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF
Sbjct: 188 GKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKF 247

Query: 311 LVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRET 370
           LVDHSVLPLFEKSFNTP SQDRQTETWADKSSLLTASQS+ISAEYPPSTKRESLFLDRET
Sbjct: 248 LVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLFLDRET 307

Query: 371 HLDSHIPSSGISLYGQDRVLPTIRSSGVGRS----GGPIVTQVTQTMQIPLSYAEDIIGV 430
           HLDSHI SSGISLYGQDRVLPTIRSSGVGRS       ++  VTQTMQIPLSYAEDIIGV
Sbjct: 308 HLDSHISSSGISLYGQDRVLPTIRSSGVGRSXXXXXXXLIYSVTQTMQIPLSYAEDIIGV 367

Query: 431 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVTSS 490
           GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKE VTSS
Sbjct: 368 GGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSS 427

Query: 491 SYGRLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 537
           SYGRLDT GLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGY+TFRL
Sbjct: 428 SYGRLDTTGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTTFRL 474

[Close]

BLAST of CmUC11G215360 vs. ExPASy TrEMBL
Match: A0A6J1EV22 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=3662 GN=LOC111436202 PE=4 SV=1)

HSP 1 Score: 799.7 bits (2064), Expect = 7.7e-228
Identity = 425/467 (91.01%), Postives = 443/467 (94.86%), Query Frame = 0


Query: 71  ENGSTDANALNSNPQTSTLSSLAAAEPDSTEAGGADSDIDPSNQDYLSVPASDSAAH-EG 130
           +NGSTDANALN NP++S L+S+AAAEPDS EAGGA+SD+DPSNQDYLS PASDSA H E 
Sbjct: 8   DNGSTDANALNFNPESSPLASVAAAEPDSMEAGGAESDLDPSNQDYLSAPASDSADHDES 67

Query: 131 PNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGT 190
           PNHT ASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGT
Sbjct: 68  PNHTDASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGT 127

Query: 191 PDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINL 250
           PDRVVLISGKE+ EAPLSPAMDAVIRVFKRV   SENEDEAK SFCSIRLLVASTQAINL
Sbjct: 128 PDRVVLISGKEDPEAPLSPAMDAVIRVFKRVFLFSENEDEAKTSFCSIRLLVASTQAINL 187

Query: 251 IGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRK 310
           IGKQGSLIKSIQESTGAS+RVLSGDEMPFYAGADERMVELQGESLKVLKALE VVGHLRK
Sbjct: 188 IGKQGSLIKSIQESTGASIRVLSGDEMPFYAGADERMVELQGESLKVLKALEAVVGHLRK 247

Query: 311 FLVDHSVLPLFEKSFNTPTSQDRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRE 370
           FLVD SVLPLFEKSFN P SQDRQ + WADKSSLLT+SQSVISAEYP STKRESL+LDRE
Sbjct: 248 FLVDRSVLPLFEKSFNIPPSQDRQMDAWADKSSLLTSSQSVISAEYPSSTKRESLYLDRE 307

Query: 371 THLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT 430
            +LDS+IPSSGISLYGQ+RVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT
Sbjct: 308 AYLDSYIPSSGISLYGQERVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT 367

Query: 431 NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVTSSSYG 490
           NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKE VTSSSYG
Sbjct: 368 NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPVTSSSYG 427

Query: 491 RLDTAGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYSTFRL 537
           RLDT+G+RSSYSQL A+GSSYTSSSLSSQ YGGYGSSGLGGYSTFRL
Sbjct: 428 RLDTSGMRSSYSQLDAAGSSYTSSSLSSQLYGGYGSSGLGGYSTFRL 474

[Close]

BLAST of CmUC11G215360 vs. TAIR 10
Match: AT4G26000.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 441.0 bits (1133), Expect = 1.3e-123
Identity = 256/456 (56.14%), Postives = 326/456 (71.49%), Query Frame = 0


Query: 117 LSVPASDSAAHEG-PNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEE 176
           L+ P S +AA    P+   +++++WPGWPGDCVFR+IVPV KVG+IIGRKGD IKKMCEE
Sbjct: 43  LNQPDSLAAAETTFPDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEE 102

Query: 177 TRARIRVLDGAVGTPDRVVLISGKEELEAPLSPAMDAVIRVFKRVSGLSENEDE----AK 236
           TRARI+VLDG V TPDR+VLISGKEE EA +SPAMDAV+RVF+RVSGL +N+D+    A 
Sbjct: 103 TRARIKVLDGPVNTPDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAG 162

Query: 237 ASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQG 296
           + F S+RLLVASTQAINLIGKQGSLIKSI E++GASVR+LS +E PFYA  DER+V+LQG
Sbjct: 163 SVFSSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQG 222

Query: 297 ESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPTSQDRQTETWAD-KSSLLTASQSV 356
           E+LK+LKALE +VGHLR+FLVDH+V+PLFEK +    SQ RQ E  A+ KSSL T S ++
Sbjct: 223 EALKILKALEAIVGHLRRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL 282

Query: 357 ISAEYPPSTKRESLFLDRETHLDSHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVT 416
           +  ++    +RE LFL+R++ +DS +  SG+S+Y QD VL    S G+ R     VTQV+
Sbjct: 283 MEPDFSLLARREPLFLERDSRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVS 342

Query: 417 QTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQ 476
           QTMQIP SYAEDIIGV G NIA+IRR SGA +TI+ES   PD+ITVEIKGT+SQVQ A+Q
Sbjct: 343 QTMQIPFSYAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQ 402

Query: 477 LIQEAVSAPKEAVT-SSSYGRLDTAGL---------------------------RSSYSQ 536
           LIQE +   KE V+ S  Y R+D+  +                            ++YSQ
Sbjct: 403 LIQEFIINHKEPVSVSGGYARIDSGYVPAYPPQLSNRQEPLPSTYMGTEPVQYRPTAYSQ 462

[Close]

BLAST of CmUC11G215360 vs. TAIR 10
Match: AT3G04610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 272.3 bits (695), Expect = 8.2e-73
Identity = 199/518 (38.42%), Postives = 272/518 (52.51%), Query Frame = 0


Query: 42  PSRTLLPPPLPSSDFSLHRRRCLLLQFSRENGSTDANALNSNPQTSTLSSLAAAEPDSTE 101
           P +TL P      D   + +  L  Q + +      + L   PQ      L     D  +
Sbjct: 71  PDQTLEPQQYEVDDQLEYHQYQLQDQANEDVQDHSQDDLQYQPQNQEQFQLQDEAHDQAQ 130

Query: 102 AGGADSDIDPSNQDYLSVPASDSAAHEG-PNH--------------TGASDKKWPGWPGD 161
              A  D+   N D +     D    EG P H               G  +K+WPGWPG+
Sbjct: 131 Y-QAQGDVQDHNGDEVQDKVED---EEGIPEHLESLQKSEPEEDATVGGEEKRWPGWPGE 190

Query: 162 CVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAPL 221
            VFR++VP  KVGSIIGRKGD+IKK+ EETRARI++LDG  GT +R V++SGKEE E+ L
Sbjct: 191 TVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSL 250

Query: 222 SPAMDAVIRVFKR-VSGLSENEDEA-KASFCSIRLLVASTQAINLIGKQGSLIKSIQEST 281
            P+MD ++RV  R V GL     +A   S  S RLLV ++QA +LIGKQG  +K+IQE++
Sbjct: 251 PPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEAS 310

Query: 282 GASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSF 341
              VRVL  +++P +A  D+R+VE+ GE   V +ALE +  HLRKFLVD S++P FE   
Sbjct: 311 ACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSIIPFFENQM 370

Query: 342 NTPTSQ-DRQTETWADKSSLLTASQSVISAEY--------PPSTKRESLFLDRETHLD-- 401
             PT Q D               + SV    Y         P  + +S +   E      
Sbjct: 371 QKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHDSYYPPPEMRQPPM 430

Query: 402 SHIPSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAF 461
              P  GIS YG++  +    +  V  +   +  QVTQ MQIPLSYA+ +IG  G+NI++
Sbjct: 431 EKQPHQGISAYGREPPM----NVHVSSAPPMVAQQVTQQMQIPLSYADAVIGTSGSNISY 490

Query: 462 IRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEAVTSSSYGRLDT 521
            RR SGA +TIQE+RG+P E+TVE+ GT SQVQ A QLIQ  ++   EA   +       
Sbjct: 491 TRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFMA---EAGAPAPAQPQTV 550

Query: 522 AGLRSSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGY 532
           A  +  Y+  A  GS Y ++  +    GGY +    GY
Sbjct: 551 APEQQGYNPYATHGSVYAAAPTNPP--GGYATDYSSGY 575

[Close]

BLAST of CmUC11G215360 vs. TAIR 10
Match: AT1G51580.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 110.9 bits (276), Expect = 3.2e-24
Identity = 94/343 (27.41%), Postives = 153/343 (44.61%), Query Frame = 0


Query: 146 DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAP 205
           +  FRL+ P  KVGS+IG+ G +++ +  E+ A I+V D    + +R+++IS +E LE  
Sbjct: 275 EVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERR 334

Query: 206 LSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTG 265
            S A D V+RV  R+  +      A  +    RLLV S     L+GK G LI  ++ +TG
Sbjct: 335 HSLAQDGVMRVHNRIVEIGFEPSAAVVA----RLLVHSPYIGRLLGKGGHLISEMRRATG 394

Query: 266 ASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSV--------L 325
           AS+RV + D+   Y    + +V++ G    V  AL  ++  LR+ +    +         
Sbjct: 395 ASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLPFQGMGGPP 454

Query: 326 PLFEKSFNTPTSQ--DRQTETWADKSSLLTASQSVISAEYPPSTKRESLFLDRETHLDSH 385
           P F   +  P      RQ     D+               P   +      DR     S 
Sbjct: 455 PPFMGPYPEPPPPFGPRQYPASPDRYHSPVGPFHERHCHGPGFDRPPGPGFDRPPSPMSW 514

Query: 386 IPSSGISLYGQDRVLP------TIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGT 445
            P  GI  +    V P       +R+  +G S  P++T     + IP +Y   + G   +
Sbjct: 515 TPQPGIDGHPGGMVPPDVNHGFALRNEPIG-SENPVMTSANVEIVIPQAYLGHVYGENCS 574

Query: 446 NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLI 473
           N+ +I++ SGA + + + +    E  V + GTS Q   AQ L+
Sbjct: 575 NLNYIKQVSGANVVVHDPKAGTTEGLVVVSGTSDQAHFAQSLL 612

[Close]

BLAST of CmUC11G215360 vs. TAIR 10
Match: AT5G64390.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 96.7 bits (239), Expect = 6.2e-20
Identity = 97/390 (24.87%), Postives = 172/390 (44.10%), Query Frame = 0


Query: 146 DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELEAP 205
           D VF+++      G +IG  G +++ +  ET A I V +      +R++ ++  E  E  
Sbjct: 451 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQ 510

Query: 206 LSPAMDAVIRVFKRVSGLSENE--DEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQES 265
            SPA  A++ +F R+  L+ N+  D    S  + RL+V ++Q   ++GK G ++  ++++
Sbjct: 511 SSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKT 570

Query: 266 TGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKS 325
           TGA++++L  ++ P     ++++V++ GE   V +A+  +   LR  +  +S+     KS
Sbjct: 571 TGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKS 630

Query: 326 FNTPTSQ---DRQTET---------------------WADKSSLLTASQSVI----SAEY 385
            +  T++   DRQ++                         + S L+ S S +    S   
Sbjct: 631 SSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSVNYSRSVGT 690

Query: 386 PPSTKRESLFLDR----------------ETHLDS--HI------------PSSGISLYG 445
            P  + E  F DR                  H D+  H+            P++   L  
Sbjct: 691 DPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHHLTEAPSRLWASPPPAAPRGLSD 750

Query: 446 QDRVLPTIRSSGVGRSG--GPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILT 473
               L + R+  V  SG    IVT  T  +++P +    + G  G N+  +R+ SGA + 
Sbjct: 751 ASGGLSSARAGHVLGSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVI 810

[Close]

BLAST of CmUC11G215360 vs. TAIR 10
Match: AT5G46190.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 95.9 bits (237), Expect = 1.0e-19
Identity = 97/332 (29.22%), Postives = 156/332 (46.99%), Query Frame = 0


Query: 150 RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVG-TPDRVVLISGKEELEAPLSP 209
           ++I    K+G +IG+ G  IK + + + + I V D       D V+ ++  E  +   S 
Sbjct: 320 KVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSM 379

Query: 210 AMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASV 269
           A++AV+ + ++++   E+ED+ K     ++LLV+S     +IGK GS+I  I++ T A +
Sbjct: 380 AVEAVLLLQEKIN--DEDEDKVK-----MQLLVSSKVIGCIIGKSGSIISEIRKRTKADI 439

Query: 270 RVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNTPT 329
            +  G+  P  A  ++ +VE+ GE   V  AL  +V  LR    D  +      S N P 
Sbjct: 440 HISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLR----DDVLRDRETGSRNQPP 499

Query: 330 SQDRQTETWADKSSL--LTASQSVISAEYPPSTKRESLFLDRETHLD-SHIPSS-GISLY 389
           ++      ++  SS   L   QS +S+   P           ET    S +PSS GI  Y
Sbjct: 500 ARSENNNFFSSSSSNTGLALPQSFMSS--VPQVASVDFNRRPETGSSMSMLPSSGGIYGY 559

Query: 390 GQDRVLPTIRSSGVGRSG---GPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAI 449
           G   V  T   S    S    G +    T  ++IP +    ++G GG N+  IRR SGA+
Sbjct: 560 GSFPVGNTSYGSNSSYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDNIRRISGAM 619

Query: 450 LTIQESRGLPDEITVEIKGTSSQVQMAQQLIQ 474
           + I +S+         I GTS Q + A+ L Q
Sbjct: 620 IEISDSKNSHGGRVALISGTSEQKRTAENLFQ 638

The following BLAST results are available for this feature:

BLAST of CmUC11G215360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890982.1	2.9e-245	97.00	RNA-binding KH domain-containing protein PEPPER-like [Benincasa hispida]	[more]
TYK03085.1	3.9e-234	94.21	RNA-binding KH domain-containing protein PEPPER [Cucumis melo var. makuwa]	[more]
XP_004149510.2	3.3e-233	93.99	RNA-binding KH domain-containing protein PEPPER isoform X1 [Cucumis sativus] >KG...	[more]
XP_022996845.1	2.4e-228	91.43	RNA-binding KH domain-containing protein PEPPER-like [Cucurbita maxima]	[more]
KAG7029848.1	3.2e-228	91.22	RNA-binding KH domain-containing protein PEPPER [Cucurbita argyrosperma subsp. a...	[more]

BLAST of CmUC11G215360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZH4	1.9e-122	56.14	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SR13	1.2e-71	38.42	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
F4KDN0	8.7e-19	24.87	KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S...	[more]
P57721	8.7e-19	28.61	Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2	[more]
P57722	8.7e-19	28.61	Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3	[more]

BLAST of CmUC11G215360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BVI2	1.9e-234	94.21	RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0LMH4	1.6e-233	93.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G061550 PE=4 SV=1	[more]
A0A6J1K7W7	1.2e-228	91.43	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661...	[more]
A0A1S4E0X0	2.0e-228	91.91	RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1EV22	7.7e-228	91.01	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=36...	[more]

BLAST of CmUC11G215360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26000.1	1.3e-123	56.14	RNA-binding KH domain-containing protein	[more]
AT3G04610.1	8.2e-73	38.42	RNA-binding KH domain-containing protein	[more]
AT1G51580.1	3.2e-24	27.41	RNA-binding KH domain-containing protein	[more]
AT5G64390.1	6.2e-20	24.87	RNA-binding KH domain-containing protein	[more]
AT5G46190.1	1.0e-19	29.22	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 407..477 e-value: 6.9E-11 score: 52.2 coord: 145..218 e-value: 3.6E-9 score: 46.5 coord: 233..308 e-value: 8.0E-9 score: 45.3
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 237..301 e-value: 3.8E-10 score: 39.4 coord: 149..201 e-value: 5.3E-11 score: 42.2 coord: 410..474 e-value: 1.8E-11 score: 43.7
None	No IPR available	GENE3D	3.30.310.210		coord: 146..310 e-value: 1.6E-29 score: 104.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..95
None	No IPR available	PANTHER	PTHR10288:SF277	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN PEPPER	coord: 135..522
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 135..522
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 234..303 score: 13.439081
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 146..213 score: 13.879309
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 408..472 score: 14.361462
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 148..217 e-value: 1.27722E-19 score: 80.5983
None	No IPR available	CDD	cd00105	KH-I	coord: 410..473 e-value: 3.07864E-12 score: 59.8811
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 236..301 e-value: 2.48523E-16 score: 71.3535
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 400..479 e-value: 3.4E-14 score: 54.3
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 231..314
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 140..201
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 404..477

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC11G215360.1	CmUC11G215360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048467	gynoecium development
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0048579	negative regulation of long-day photoperiodism, flowering
biological_process	GO:0048577	negative regulation of short-day photoperiodism, flowering
biological_process	GO:0010468	regulation of gene expression
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding