CmUC11G214150 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTTAAAACTCCATGACACCATAGGTGGAAACACAACTCATGTAATCCAAGAACTGTTTGGGATTCAATCTAGGGCAGAAAAAGACTATCTTCATCAAACCTTCCAACAAACAAGTATGTCTGAATATTTACGATTAATCAAAATGCACTCTGACAATTTAGGGCAAGCTGGGAGCCCCGTTCCAACAAGCACACTGATCTCACAAGTCCTTCTCAAACATAATGGAGAATATAATGCCATTGTTTCCACTCTCCAAGGGAAGTCGAATATTACATGGTTGCAAATGCAATCTGAGTTACTATCATATGAGAAGAGATTGGAAGCCCAAAACACGCAAAGGAATGCAACTATAAGTAATAATCCCTCCGTAATATGGCTAATAGCAGAGGAGTCAGATCTCAGCAGCCACAAAATCCACCGTCACAAAATCAGGGCCGTGGTTGAAATAACTACAGTGGACAACGTGGAGGAAACCAATTAAAAAATAGAGTTCGAGGTAGGGGCCGAAATCAACTGACATGTCAAGTTTTTGGGAAAATCGGCCACATTGCAGACATATGCTACAATCGATATAACAAGGAGTTTACTCTTAACTTCAATCCGAACAAAAAGAATAGTGGAAACACCTTCAGAAACAACAATGGAAAACCTTCTACTGCCATGGTTGCCACACACAATGGAAATTCCTTTTACACAAATTATGAAAACACAGTTGAACAAAGTTGGTATGCTGATAGTGGAGCAACCAATCATGTGATTTCAAACTACAACAACCTCACTAATCCTATGGAATATGGAGGTAATGAATTGGTAATTGTAGGTAATGGTAATACATTACAAATTGCTTCTGTTGGTAACCCAATGCTGACTAATGGAAAATATTCGTTGAATCTAAATATTATACTACATGTTTCATATATTGCTAAAACCCTTGTTAGTGTGTCCAAGTTAGCAAAGGACAATAACGTGTTTATTGAATTTCACGATAATTATTGTCTTGTAAAGGACTAGGTTTTGGGGCAACCAATTTTGAGGGGCATACTTAAAGATGGGCTTCATCTGGAAGAAGTCACTGTGAAATCTACTGGGTCGGTTAGAACTACTACTGCCTGTGAGTTCAAGAAGGTTGTGAATGTAAATAAAGAGGATCCATTAACCTTGACGTTATCTAATATTTCTATTAGTAGTGTTGTATCTAAAACTACTTGGCATCGACAGTTGGGACATCCCTCACCGAGAATTTTCAATTTAGTCACCAAAGGTTGTAATCTGTCATTTAAAAGAGATACAACCAAAATTTTTCATTCATGCGAGTTGGGTAAATCACATAGTACTCCTTTCTCGTTGTCTGAATCACGTACCTAAAAAGCATTTGATTTGATTCATACTGACATGTGGGGTCTTGCCCCAATGTTATCCTCTGTTGGCTTCAGATATTATATACCTTTTATCGATGATTTTAGTCGTTATGTTTGGATTTACCCTCTTCGTCTAAAAATTGATACAGTGGCAGCATTTGAACACTTTGTGAAGTTGATCAAAACTCAATTCAACAGTGGTATAAAACCTCTTCAACCCGAAAATGGTGGTGAATATAAGAAAACTCATTAGTTATGTGAAAATTTAGATACAATCACTTGAATTTCATGCCCATACACCTCACTCAAAAAGACGTGTCGAGTGTAAGCATCGTCATGTAGTAGAGATGGCCTAACTTTATTAGCCCAAGTATTGTTACCTTTACCATTCTGGTGGGATGTGTTTAATATAGCAGCTCAACTAATCAATGGTCTTCCCACACCGATTCTTTAAGACAAATCTCCAATGGAAGTATTATTAAACAAAAAACTTGATTTCACTACTCTTCGAACTTTTGGTTGTCCATGCTATCCATGTTTGAGACCTCATTAGATTAACAAATTTGATTTTCATTCAGAAAAATGTCTACTTGGGACCAAGCTCACATCACAAAGGATATAAATGTTTGAATGTTGCAGGACAAATTTTTATCTCTAGAAGTGTGAAATTTGATGAAGTAGACTTTCCCTTCTCAACCAAAACCAGTCAAAACAACTTCAACACCAAATCCACGACCCACATTTTCCTACCAGTGTTTAGCCCACCACCAACCTTTACAATGTTCAATCCAGCCCAAAATTCATCCCAATCCATTCAACCTCTACCTAGCCCATGTGACCCAACCCAATCATCTGTCAGTACTAACCCAAATCCAGGAACTCATCACCCTGTTATTGAATCTCCATCCATCCGTCAGGCCCCATCCTATTTCTAAGCCCATAGTCCACAAAATTCTCCAGCCACCAGCCTAACCTAAAACCACAATGACCCACCTAACCTAGTTGTCTCGACGCCTAACTCTCTAGACATCAAACATCTGTCGTCCTCACCCTCTTCTCCTTAGCCCCCATCACTGAACCATAGTCCAACACAAATTGCAACAACTCCACCTGCTCCGGTAACTACACTTCAGCCCACACATCCTATTACTCAAGAGAAAGCTCGGATCTTCAAACCGAAAGCTTGGATATCAAAAGTAACACATGACTGGACTGACACTGAACCTACAAGAGTAGCTAATGCCATTAAAACACCACAATGGACATCCACCATAGATCAGGAGTATGAGGCATTGATGAGGAACAAGACATGGAGGTTAGTTAACCCATCTCCCAAACTTAACATTGTCAGCAATAAATGGATCTTTTGGATCAGACGAAACACTGACGACTTTGTTTAATGCTATAAAGCACGATTAGTGGCAAGAGGGTTTCACCAAAGCTCAAGAATAATTTTCTTTAAAACCTTCAATCTGGTTGCAAAAGCCTCTACCAATCGTGTTATTATAGGTTTTTGCTGTATCCAAGCCATGGCCACTTTGACAGCTCAACTTCAACAATGTGTTTCTTAACAGTAATCTTGATGAAGAAGTCTACATGTCTAAATCTCTGGGATACGTTAACTCTCAATATCCTGACTATGTTTGTTGA ATGACTTTAAAACTCCATGACACCATAGGTGGAAACACAACTCATGTAATCCAAGAACTGTTTGGGATTCAATCTAGGGCAGAAAAAGACTATCTTCATCAAACCTTCCAACAAACAAGGCAAGCTGGGAGCCCCGTTCCAACAAGCACACTGATCTCACAAGTCCTTCTCAAACATAATGGAGAATATAATGCCATTGTTTCCACTCTCCAAGGGAAGTCGAATATTACATGGTTGCAAATGCAATCTGAGTTACTATCATATGAGAAGAGATTGGAAGCCCAAAACACGCAAAGGAATGCAACTATAAGTAATAATCCCTCCGTAATATGGCTAATAGCAGAGGATGGACAACGTGGAGGAAACCAATTAAAAAATAGAGTTCGAGGTAGGGGCCGAAATCAACTGACATGTCAAGTTTTTGGGAAAATCGGCCACATTGCAGACATATGCTACAATCGATATAACAAGGAGTTTACTCTTAACTTCAATCCGAACAAAAAGAATAGTGGAAACACCTTCAGAAACAACAATGGAAAACCTTCTACTGCCATGGTTGCCACACACAATGGAAATTCCTTTTACACAAATTATGAAAACACAGTTGAACAAAGTTGGTATGCTGATAGTGGAGCAACCAATCATGTGATTTCAAACTACAACAACCTCACTAATCCTATGGAATATGGAGGTAATGAATTGGTAATTGTAGGTAATGGTAATACATTACAAATTGCTTCTGTTGGTAACCCAATGCTGACTAATGGAAAATATTCGTTGAATCTAAATATTATACTACATGTTTCATATATTGCTAAAACCCTTGTTAGTGTGTCCAAGTTAGCAAAGGACAATAACGTTTTGGGGCAACCAATTTTGAGGGGCATACTTAAAGATGGGCTTCATCTGGAAGAAGTCACTGTGAAATCTACTGGGTCGGTTAGAACTACTACTGCCTGTGAGTTCAAGAAGCCCCCATCACTGAACCATAGTCCAACACAAATTGCAACAACTCCACCTGCTCCGGTAACTACACTTCAGCCCACACATCCTATTACTCAAGAGAAAGCTCGGATCTTCAAACCGAAAGCTTGGATATCAAAAGTAACACATGACTGGACTGACACTGAACCTACAAGAGTAGCTAATGCCATTAAAACACCACAATGGACATCCACCATAGATCAGGAGTATGAGGCATTGATGAGGAACAAGACATGGAGGTTAGTTAACCCATCTCCCAAACTTAACATTCTCAACTTCAACAATGTGTTTCTTAACAGTAATCTTGATGAAGAAGTCTACATGTCTAAATCTCTGGGATACGTTAACTCTCAATATCCTGACTATGTTTGTTGA ATGACTTTAAAACTCCATGACACCATAGGTGGAAACACAACTCATGTAATCCAAGAACTGTTTGGGATTCAATCTAGGGCAGAAAAAGACTATCTTCATCAAACCTTCCAACAAACAAGGCAAGCTGGGAGCCCCGTTCCAACAAGCACACTGATCTCACAAGTCCTTCTCAAACATAATGGAGAATATAATGCCATTGTTTCCACTCTCCAAGGGAAGTCGAATATTACATGGTTGCAAATGCAATCTGAGTTACTATCATATGAGAAGAGATTGGAAGCCCAAAACACGCAAAGGAATGCAACTATAAGTAATAATCCCTCCGTAATATGGCTAATAGCAGAGGATGGACAACGTGGAGGAAACCAATTAAAAAATAGAGTTCGAGGTAGGGGCCGAAATCAACTGACATGTCAAGTTTTTGGGAAAATCGGCCACATTGCAGACATATGCTACAATCGATATAACAAGGAGTTTACTCTTAACTTCAATCCGAACAAAAAGAATAGTGGAAACACCTTCAGAAACAACAATGGAAAACCTTCTACTGCCATGGTTGCCACACACAATGGAAATTCCTTTTACACAAATTATGAAAACACAGTTGAACAAAGTTGGTATGCTGATAGTGGAGCAACCAATCATGTGATTTCAAACTACAACAACCTCACTAATCCTATGGAATATGGAGGTAATGAATTGGTAATTGTAGGTAATGGTAATACATTACAAATTGCTTCTGTTGGTAACCCAATGCTGACTAATGGAAAATATTCGTTGAATCTAAATATTATACTACATGTTTCATATATTGCTAAAACCCTTGTTAGTGTGTCCAAGTTAGCAAAGGACAATAACGTTTTGGGGCAACCAATTTTGAGGGGCATACTTAAAGATGGGCTTCATCTGGAAGAAGTCACTGTGAAATCTACTGGGTCGGTTAGAACTACTACTGCCTGTGAGTTCAAGAAGCCCCCATCACTGAACCATAGTCCAACACAAATTGCAACAACTCCACCTGCTCCGGTAACTACACTTCAGCCCACACATCCTATTACTCAAGAGAAAGCTCGGATCTTCAAACCGAAAGCTTGGATATCAAAAGTAACACATGACTGGACTGACACTGAACCTACAAGAGTAGCTAATGCCATTAAAACACCACAATGGACATCCACCATAGATCAGGAGTATGAGGCATTGATGAGGAACAAGACATGGAGGTTAGTTAACCCATCTCCCAAACTTAACATTCTCAACTTCAACAATGTGTTTCTTAACAGTAATCTTGATGAAGAAGTCTACATGTCTAAATCTCTGGGATACGTTAACTCTCAATATCCTGACTATGTTTGTTGA MTLKLHDTIGGNTTHVIQELFGIQSRAEKDYLHQTFQQTRQAGSPVPTSTLISQVLLKHNGEYNAIVSTLQGKSNITWLQMQSELLSYEKRLEAQNTQRNATISNNPSVIWLIAEDGQRGGNQLKNRVRGRGRNQLTCQVFGKIGHIADICYNRYNKEFTLNFNPNKKNSGNTFRNNNGKPSTAMVATHNGNSFYTNYENTVEQSWYADSGATNHVISNYNNLTNPMEYGGNELVIVGNGNTLQIASVGNPMLTNGKYSLNLNIILHVSYIAKTLVSVSKLAKDNNVLGQPILRGILKDGLHLEEVTVKSTGSVRTTTACEFKKPPSLNHSPTQIATTPPAPVTTLQPTHPITQEKARIFKPKAWISKVTHDWTDTEPTRVANAIKTPQWTSTIDQEYEALMRNKTWRLVNPSPKLNILNFNNVFLNSNLDEEVYMSKSLGYVNSQYPDYVC Homology
BLAST of CmUC11G214150 vs. NCBI nr
Match: TYJ99887.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 219.9 bits (559), Expect = 4.4e-53 Identity = 141/304 (46.38%), Postives = 180/304 (59.21%), Query Frame = 0
BLAST of CmUC11G214150 vs. NCBI nr
Match: KAA0051899.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 219.2 bits (557), Expect = 7.4e-53 Identity = 141/304 (46.38%), Postives = 180/304 (59.21%), Query Frame = 0
BLAST of CmUC11G214150 vs. NCBI nr
Match: TYK05754.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 209.1 bits (531), Expect = 7.7e-50 Identity = 140/350 (40.00%), Postives = 192/350 (54.86%), Query Frame = 0
BLAST of CmUC11G214150 vs. NCBI nr
Match: XP_016902197.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]) HSP 1 Score: 188.0 bits (476), Expect = 1.8e-43 Identity = 126/284 (44.37%), Postives = 167/284 (58.80%), Query Frame = 0
BLAST of CmUC11G214150 vs. NCBI nr
Match: XP_038905161.1 (uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida]) HSP 1 Score: 180.3 bits (456), Expect = 3.8e-41 Identity = 124/298 (41.61%), Postives = 162/298 (54.36%), Query Frame = 0
BLAST of CmUC11G214150 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 5.4e-14 Identity = 78/310 (25.16%), Postives = 126/310 (40.65%), Query Frame = 0
HSP 2 Score: 42.0 bits (97), Expect = 2.1e-02 Identity = 20/43 (46.51%), Postives = 27/43 (62.79%), Query Frame = 0
BLAST of CmUC11G214150 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 6.9e-09 Identity = 101/422 (23.93%), Postives = 159/422 (37.68%), Query Frame = 0
BLAST of CmUC11G214150 vs. ExPASy TrEMBL
Match: A0A5D3BL83 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2042G00070 PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 2.1e-53 Identity = 141/304 (46.38%), Postives = 180/304 (59.21%), Query Frame = 0
BLAST of CmUC11G214150 vs. ExPASy TrEMBL
Match: A0A5A7UEH3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G003510 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 3.6e-53 Identity = 141/304 (46.38%), Postives = 180/304 (59.21%), Query Frame = 0
BLAST of CmUC11G214150 vs. ExPASy TrEMBL
Match: A0A5D3C373 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002430 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 3.7e-50 Identity = 140/350 (40.00%), Postives = 192/350 (54.86%), Query Frame = 0
BLAST of CmUC11G214150 vs. ExPASy TrEMBL
Match: A0A1S4E1U6 (uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 8.9e-44 Identity = 126/284 (44.37%), Postives = 167/284 (58.80%), Query Frame = 0
BLAST of CmUC11G214150 vs. ExPASy TrEMBL
Match: A0A5D3BEZ6 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00640 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 7.3e-38 Identity = 145/467 (31.05%), Postives = 200/467 (42.83%), Query Frame = 0
BLAST of CmUC11G214150 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) ) HSP 1 Score: 46.2 bits (108), Expect = 8.0e-05 Identity = 29/74 (39.19%), Postives = 35/74 (47.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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