CmUC11G214060 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC11G214060
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	photosystem I reaction center subunit IV, chloroplastic-like
Location	CmU531Chr11: 18185321 .. 18186735 (+)
RNA-Seq Expression	CmUC11G214060
Synteny	CmUC11G214060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATAGGCTGAGAAAATTCCAGCAAGAATTATTACCCATAAAACAACTGATTCTTTCTCCTTCAATATGTGGTTATCATTATTTCATTGGTTTATCTCTTATTATTCAAACCCCATCTTCCAAAGCATTAACACTCAATCTCTCAAAGCTGCTTTCATCAGTTAAGGCATAGAAGAGAGATTCAAAGACAAAAGGCAATGGCTACCTCTAACCTTTCTTGCATTGCTTCTGGAGTGGTCATTCCCTCTTCAACCACCATCTCATCTTCCTCTTCTAGGTTATCTTCTCTCGCCTTCTTCCCCAAGAATTCCAACTCTGTTTCAAGATCATCTAGATTGGTTATCCGGGCTGCCGCCTCCGACGAGGCTGCTCCCCCACCTCCGGCTGCCGCTCCCGCTGCCGCCACCGCCGAAGAGCCCAAGCCTAAGCCTGCCCCTATTGGTCCCAAAAGAGGTTCCAAGGTGTGAGACCTTTTTTTCCTTTTTTTTTTTATTTAGTTCAAATCCAGATTAGGATTCCAACCTCTAATTTTTAACAAAATCTTGGCATGTATTTGAACAGGTGAAGATTCTAAGGAAAGAATCCTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGATCAGGTTGGACCCTTGAATTTTTATCTATTTATCATTTTTGTTTCTGGATGTGTGTGCAAATAGAAACTTTTTGGTTCTATTAATTTTTCATATTCTCATTTTATAGTGAGATTTGACACTCACAAAGTCAAGTGGGCTAAGATTTATGAGGGGAACTAAGTCAAGCCTGCTCTGTTTTTGGATTGAGGTTATCCGTTATGAAATGGAAAATCAAACAATTTTAATGGTAAATTTTTTTTTACAATACGTGAGATGGAAGTTGGGGGATCAAACCTTAGATCGAGGTTGATAGTACAAATTCATGTTAGTTGAGCTATATTCATATTGATGACTAGTTAATAATAGCTTTCGAAATTTCATATTTTATTTTGCTTTTGAAGGTGAAAATTTGTAATTTATTAAACACATATGAAGTTTATATTACGGTTGATTTTTTCTTTTTCATTTTTTTTTTTTATAAAAAAAATGAATGTATGTATACTCATGCTTAATGCATAAATGATATTTTGCAGGACCCAAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGCTTAAGCTTTTTTTTATGTGCTTGTGTATTTTTGAGTTAAATGTTTGTATAATACTTCCAATTTCAATCTATTTCTCCTCTCTCCACAATTTCTCTTCACAAGAATGAGATTTTCTTAGACTTGCTTGGGAAATGAAAATAATTTTTATAACATTTTACTTCAATTGTAGAAAAAGGGG

mRNA sequence

CCATAGGCTGAGAAAATTCCAGCAAGAATTATTACCCATAAAACAACTGATTCTTTCTCCTTCAATATGTGGTTATCATTATTTCATTGGTTTATCTCTTATTATTCAAACCCCATCTTCCAAAGCATTAACACTCAATCTCTCAAAGCTGCTTTCATCAGTTAAGGCATAGAAGAGAGATTCAAAGACAAAAGGCAATGGCTACCTCTAACCTTTCTTGCATTGCTTCTGGAGTGGTCATTCCCTCTTCAACCACCATCTCATCTTCCTCTTCTAGGTTATCTTCTCTCGCCTTCTTCCCCAAGAATTCCAACTCTGTTTCAAGATCATCTAGATTGGTTATCCGGGCTGCCGCCTCCGACGAGGCTGCTCCCCCACCTCCGGCTGCCGCTCCCGCTGCCGCCACCGCCGAAGAGCCCAAGCCTAAGCCTGCCCCTATTGGTCCCAAAAGAGGTTCCAAGGTGAAGATTCTAAGGAAAGAATCCTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGATCAGGACCCAAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGCTTAAGCTTTTTTTTATGTGCTTGTGTATTTTTGAGTTAAATGTTTGTATAATACTTCCAATTTCAATCTATTTCTCCTCTCTCCACAATTTCTCTTCACAAGAATGAGATTTTCTTAGACTTGCTTGGGAAATGAAAATAATTTTTATAACATTTTACTTCAATTGTAGAAAAAGGGG

Coding sequence (CDS)

ATGGCTACCTCTAACCTTTCTTGCATTGCTTCTGGAGTGGTCATTCCCTCTTCAACCACCATCTCATCTTCCTCTTCTAGGTTATCTTCTCTCGCCTTCTTCCCCAAGAATTCCAACTCTGTTTCAAGATCATCTAGATTGGTTATCCGGGCTGCCGCCTCCGACGAGGCTGCTCCCCCACCTCCGGCTGCCGCTCCCGCTGCCGCCACCGCCGAAGAGCCCAAGCCTAAGCCTGCCCCTATTGGTCCCAAAAGAGGTTCCAAGGTGAAGATTCTAAGGAAAGAATCCTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGATCAGGACCCAAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGCTTAA

Protein sequence

MATSNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPIGPKRGSKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

Homology

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BLAST of CmUC11G214060 vs. NCBI nr
Match: XP_008441802.1 (PREDICTED: photosystem I reaction center subunit IV, chloroplastic-like [Cucumis melo])

HSP 1 Score: 255.4 bits (651), Expect = 3.0e-64
Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 1   MATSNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPP 60
           MA SNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNS+SRSSRLVIRAAASDEAAPP
Sbjct: 3   MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPP 62

Query: 61  PPAAAPAAATAEEPKPKPAPIGPKRGSKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 120
           PPAAAPAAATAEEPKPKPAPIGPKRG+KVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV
Sbjct: 63  PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 122

Query: 121 RFNKVNYASVSTNNYALDEIEEVA 145
           RFNKVNYASVSTNNYALDEIEEVA
Sbjct: 123 RFNKVNYASVSTNNYALDEIEEVA 146

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BLAST of CmUC11G214060 vs. NCBI nr
Match: XP_038889433.1 (photosystem I reaction center subunit IV, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 253.4 bits (646), Expect = 1.1e-63
Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 1   MATSNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPP 60
           MA SNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNS+SRSSRLVIRAAASDEAAPP
Sbjct: 1   MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPP 60

Query: 61  PPAAAPAAATAEEPKPKPAPIGPKRGSKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 120
           PPAAAPAAATAEEPKPKPAPIGPKRG+KVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV
Sbjct: 61  PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 120

Query: 121 RFNKVNYASVSTNNYALDEIEEVA 145
           RF+KVNYASVSTNNYALDEIEEVA
Sbjct: 121 RFSKVNYASVSTNNYALDEIEEVA 144

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BLAST of CmUC11G214060 vs. NCBI nr
Match: XP_004152807.2 (photosystem I reaction center subunit IV, chloroplastic [Cucumis sativus])

HSP 1 Score: 239.6 bits (610), Expect = 1.7e-59
Identity = 134/144 (93.06%), Postives = 137/144 (95.14%), Query Frame = 0


Query: 1   MATSNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPP 60
           MA SNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNS+SRSSRLVIR  ASDEAAPP
Sbjct: 3   MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR--ASDEAAPP 62

Query: 61  PPAAAPAAATAEEPKPKPAPIGPKRGSKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 120
           P A AP AAT EEPKPKPAPIGPKRG+KVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV
Sbjct: 63  PAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 122

Query: 121 RFNKVNYASVSTNNYALDEIEEVA 145
           RFNKVNYASVSTNNYALDEI+EVA
Sbjct: 123 RFNKVNYASVSTNNYALDEIQEVA 144

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BLAST of CmUC11G214060 vs. NCBI nr
Match: KAE8651724.1 (hypothetical protein Csa_006032 [Cucumis sativus])

HSP 1 Score: 239.6 bits (610), Expect = 1.7e-59
Identity = 134/144 (93.06%), Postives = 137/144 (95.14%), Query Frame = 0


Query: 1   MATSNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPP 60
           MA SNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNS+SRSSRLVIR  ASDEAAPP
Sbjct: 91  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR--ASDEAAPP 150

Query: 61  PPAAAPAAATAEEPKPKPAPIGPKRGSKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 120
           P A AP AAT EEPKPKPAPIGPKRG+KVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV
Sbjct: 151 PAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 210

Query: 121 RFNKVNYASVSTNNYALDEIEEVA 145
           RFNKVNYASVSTNNYALDEI+EVA
Sbjct: 211 RFNKVNYASVSTNNYALDEIQEVA 232

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BLAST of CmUC11G214060 vs. NCBI nr
Match: KAA0061399.1 (photosystem I reaction center subunit IV [Cucumis melo var. makuwa] >TYK28659.1 photosystem I reaction center subunit IV [Cucumis melo var. makuwa])

HSP 1 Score: 237.3 bits (604), Expect = 8.4e-59
Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 13  VVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPPPPAAAPAAATAE 72
           VVIPSSTTISSSSSRLSSLAFFPKNSNS+SRSSRLVIRAAASDEAAPPPPAAAPAAATAE
Sbjct: 10  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAE 69

Query: 73  EPKPKPAPIGPKRGSKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVST 132
           EPKPKPAPIGPKRG+KVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVST
Sbjct: 70  EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVST 129

Query: 133 NNYALDEIEEVA 145
           NNYALDEIEEVA
Sbjct: 130 NNYALDEIEEVA 141

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BLAST of CmUC11G214060 vs. ExPASy Swiss-Prot
Match: Q41229 (Photosystem I reaction center subunit IV B, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=PSAEB PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.7e-33
Identity = 87/147 (59.18%), Postives = 111/147 (75.51%), Query Frame = 0


Query: 1   MATSNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRS-SRLVIRAAASDEAAP 60
           MA+S+++  ASG ++ +    +S+++  +S+ FF  + N+ + +  RLV+RAA  +EAAP
Sbjct: 1   MASSSMASAASGFMVATPNIATSNTAPRTSMLFFSSSKNNTTTNFPRLVVRAA--EEAAP 60

Query: 61  PPPAAAPAAATAEEP---KPKPAPIGPKRGSKVKILRKESYWYKDVGSVVTVDQDPNTRY 120
           P   AA A A  E P     KP PIGPKRG+KV++LRKESYWYK VGSVV VDQDPNTRY
Sbjct: 61  P---AATATAEGEAPPAKAAKPPPIGPKRGTKVRVLRKESYWYKGVGSVVAVDQDPNTRY 120

Query: 121 PVVVRFNKVNYASVSTNNYALDEIEEV 144
           PVVVRFNKVNYA+VSTNNYALDE+EEV
Sbjct: 121 PVVVRFNKVNYANVSTNNYALDEVEEV 142

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BLAST of CmUC11G214060 vs. ExPASy Swiss-Prot
Match: Q41228 (Photosystem I reaction center subunit IV A, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=PSAEA PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 9.1e-32
Identity = 84/143 (58.74%), Postives = 104/143 (72.73%), Query Frame = 0


Query: 1   MATSNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPP 60
           MA+ N++  AS  ++ +    S++++  +++ FF  + N  S + RLV+RAA  +EAAPP
Sbjct: 1   MASCNMASAASNFLVATPNVASNTNTSRTTMLFF-SSKNYGSTAPRLVVRAA--EEAAPP 60

Query: 61  PPAAAPAAATAEEPKPKPAPIGPKRGSKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 120
             AA    A A     KP PIGPKRG+KV+ILRKESYWYK  GSVV  DQDPNTRYPVVV
Sbjct: 61  AAAATAEPAEAPVKAAKPPPIGPKRGTKVRILRKESYWYKGTGSVVACDQDPNTRYPVVV 120

Query: 121 RFNKVNYASVSTNNYALDEIEEV 144
           RFNKVNYA+VSTNNYALDEIEEV
Sbjct: 121 RFNKVNYANVSTNNYALDEIEEV 140

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BLAST of CmUC11G214060 vs. ExPASy Swiss-Prot
Match: Q9S831 (Photosystem I reaction center subunit IV A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAE1 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.5e-31
Identity = 85/138 (61.59%), Postives = 103/138 (74.64%), Query Frame = 0


Query: 14  VIPSS-TTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRA------AASDEAAPPPPAAAP 73
           V+P++ T+++ +SS  SS++F P      +  SRLV+RA      A+S     P  AAAP
Sbjct: 11  VLPANVTSVAGASSSRSSVSFLPMR----NAGSRLVVRAAEDPAPASSSSKDSPAAAAAP 70

Query: 74  AAATAEEPKPKPAPIGPKRGSKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVN 133
             ATA   KPKP PIGPKRGSKVKILR+ESYW+K+VGSVV VDQDP TRYPVVVRF KVN
Sbjct: 71  DGATA--TKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVN 130

Query: 134 YASVSTNNYALDEIEEVA 145
           YA++STNNYALDE+EEVA
Sbjct: 131 YANISTNNYALDEVEEVA 142

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BLAST of CmUC11G214060 vs. ExPASy Swiss-Prot
Match: P12354 (Photosystem I reaction center subunit IV, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAE-1 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.9e-31
Identity = 82/123 (66.67%), Postives = 93/123 (75.61%), Query Frame = 0


Query: 22  SSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPPPPAAAPAAATAEEPKPKPAPI 81
           SS + RL      P  + S  RS+RLV+RAA  +EAA  P AA+P    A +   KP PI
Sbjct: 6   SSVAVRLGLTQVLPNKNFSSPRSTRLVVRAA--EEAAAAPAAASP-EGEAPKAAAKPPPI 65

Query: 82  GPKRGSKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIE 141
           GPKRGSKV+I+RKESYWYK VGSVV VDQDP TRYPVVVRFNKVNYA+VSTNNYALDEI+
Sbjct: 66  GPKRGSKVRIMRKESYWYKGVGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIQ 125

Query: 142 EVA 145
           EVA
Sbjct: 126 EVA 125

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BLAST of CmUC11G214060 vs. ExPASy Swiss-Prot
Match: P13194 (Photosystem I reaction center subunit IV, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAE PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-27
Identity = 81/150 (54.00%), Postives = 97/150 (64.67%), Query Frame = 0


Query: 1   MATSNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPP 60
           MA++N++   S  ++ +     ++    S ++F P N   +    +LV RA     AAP 
Sbjct: 1   MASTNMASATSRFMLAAGIPSGANGGVSSRVSFLPSNRLGL----KLVARAEEPTAAAPA 60

Query: 61  PPAAA------PAAATAEEPKPKPAPIGPKRGSKVKILRKESYWYKDVGSVVTVDQDPNT 120
            PA A       A AT E  K KP P GPKRG+KVKILR+ESYWY   GSVVTVDQDPNT
Sbjct: 61  EPAPAADEKPEAAVATKEPAKAKPPPRGPKRGTKVKILRRESYWYNGTGSVVTVDQDPNT 120

Query: 121 RYPVVVRFNKVNYASVSTNNYALDEIEEVA 145
           RYPVVVRF KVNYA VSTNNYALDEI+EVA
Sbjct: 121 RYPVVVRFAKVNYAGVSTNNYALDEIKEVA 146

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BLAST of CmUC11G214060 vs. ExPASy TrEMBL
Match: A0A1S3B3T3 (photosystem I reaction center subunit IV, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103485855 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.4e-64
Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 1   MATSNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPP 60
           MA SNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNS+SRSSRLVIRAAASDEAAPP
Sbjct: 3   MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPP 62

Query: 61  PPAAAPAAATAEEPKPKPAPIGPKRGSKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 120
           PPAAAPAAATAEEPKPKPAPIGPKRG+KVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV
Sbjct: 63  PPAAAPAAATAEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 122

Query: 121 RFNKVNYASVSTNNYALDEIEEVA 145
           RFNKVNYASVSTNNYALDEIEEVA
Sbjct: 123 RFNKVNYASVSTNNYALDEIEEVA 146

[Close]

BLAST of CmUC11G214060 vs. ExPASy TrEMBL
Match: A0A0A0LJQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G079660 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 8.2e-60
Identity = 134/144 (93.06%), Postives = 137/144 (95.14%), Query Frame = 0


Query: 1   MATSNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPP 60
           MA SNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNS+SRSSRLVIR  ASDEAAPP
Sbjct: 79  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR--ASDEAAPP 138

Query: 61  PPAAAPAAATAEEPKPKPAPIGPKRGSKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 120
           P A AP AAT EEPKPKPAPIGPKRG+KVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV
Sbjct: 139 PAATAPTAATTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 198

Query: 121 RFNKVNYASVSTNNYALDEIEEVA 145
           RFNKVNYASVSTNNYALDEI+EVA
Sbjct: 199 RFNKVNYASVSTNNYALDEIQEVA 220

[Close]

BLAST of CmUC11G214060 vs. ExPASy TrEMBL
Match: A0A5A7V6V9 (Photosystem I reaction center subunit IV OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold165G00230 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.1e-59
Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 13  VVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPPPPAAAPAAATAE 72
           VVIPSSTTISSSSSRLSSLAFFPKNSNS+SRSSRLVIRAAASDEAAPPPPAAAPAAATAE
Sbjct: 10  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAAASDEAAPPPPAAAPAAATAE 69

Query: 73  EPKPKPAPIGPKRGSKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVST 132
           EPKPKPAPIGPKRG+KVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVST
Sbjct: 70  EPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVST 129

Query: 133 NNYALDEIEEVA 145
           NNYALDEIEEVA
Sbjct: 130 NNYALDEIEEVA 141

[Close]

BLAST of CmUC11G214060 vs. ExPASy TrEMBL
Match: A0A6J1FC09 (photosystem I reaction center subunit IV, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111444038 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 5.2e-54
Identity = 125/144 (86.81%), Postives = 132/144 (91.67%), Query Frame = 0


Query: 1   MATSNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPP 60
           MA SNLSCIASGV+IPSSTTI SSSSR SS+AFFPKNS S+SRS RLV+RAAA + AAPP
Sbjct: 1   MAASNLSCIASGVIIPSSTTI-SSSSRPSSVAFFPKNSISISRSCRLVVRAAADEAAAPP 60

Query: 61  PPAAAPAAATAEEPKPKPAPIGPKRGSKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 120
           P AAA A A AE PKPKPAPIGPKRG+KVKILR+ESYWYKDVGSVVTVDQDPNTRYPVVV
Sbjct: 61  PAAAATADAPAEAPKPKPAPIGPKRGTKVKILRRESYWYKDVGSVVTVDQDPNTRYPVVV 120

Query: 121 RFNKVNYASVSTNNYALDEIEEVA 145
           RFNKVNYASVSTNNYALDEIEEVA
Sbjct: 121 RFNKVNYASVSTNNYALDEIEEVA 143

[Close]

BLAST of CmUC11G214060 vs. ExPASy TrEMBL
Match: A0A6J1HLT8 (photosystem I reaction center subunit IV, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111465716 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.3e-53
Identity = 124/144 (86.11%), Postives = 131/144 (90.97%), Query Frame = 0


Query: 1   MATSNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRAAASDEAAPP 60
           MA SNLSCIASGV+IPSS TI SSSSR SS+AFFPKNS S+SRS RLV+RAAA + AAPP
Sbjct: 1   MAASNLSCIASGVIIPSSPTI-SSSSRPSSVAFFPKNSISISRSCRLVVRAAADEAAAPP 60

Query: 61  PPAAAPAAATAEEPKPKPAPIGPKRGSKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVV 120
           P AAA A A AE PKPKPAPIGPKRG+KVKILR+ESYWYKDVGSVVTVDQDPNTRYPVVV
Sbjct: 61  PAAAATADAPAEVPKPKPAPIGPKRGTKVKILRRESYWYKDVGSVVTVDQDPNTRYPVVV 120

Query: 121 RFNKVNYASVSTNNYALDEIEEVA 145
           RFNKVNYASVSTNNYALDEIEEVA
Sbjct: 121 RFNKVNYASVSTNNYALDEIEEVA 143

[Close]

BLAST of CmUC11G214060 vs. TAIR 10
Match: AT4G28750.1 (Photosystem I reaction centre subunit IV / PsaE protein )

HSP 1 Score: 136.0 bits (341), Expect = 2.5e-32
Identity = 85/138 (61.59%), Postives = 103/138 (74.64%), Query Frame = 0


Query: 14  VIPSS-TTISSSSSRLSSLAFFPKNSNSVSRSSRLVIRA------AASDEAAPPPPAAAP 73
           V+P++ T+++ +SS  SS++F P      +  SRLV+RA      A+S     P  AAAP
Sbjct: 11  VLPANVTSVAGASSSRSSVSFLPMR----NAGSRLVVRAAEDPAPASSSSKDSPAAAAAP 70

Query: 74  AAATAEEPKPKPAPIGPKRGSKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVN 133
             ATA   KPKP PIGPKRGSKVKILR+ESYW+K+VGSVV VDQDP TRYPVVVRF KVN
Sbjct: 71  DGATA--TKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVN 130

Query: 134 YASVSTNNYALDEIEEVA 145
           YA++STNNYALDE+EEVA
Sbjct: 131 YANISTNNYALDEVEEVA 142

[Close]

BLAST of CmUC11G214060 vs. TAIR 10
Match: AT2G20260.1 (photosystem I subunit E-2 )

HSP 1 Score: 123.6 bits (309), Expect = 1.3e-28
Identity = 82/148 (55.41%), Postives = 101/148 (68.24%), Query Frame = 0


Query: 6   LSCIASGVVIPSSTTIS---SSSSRLSSLAFFPKNSNSVSRSSRLVIRAA-------ASD 65
           ++  A+G ++ ++   +    SS   + ++F P      S  SRLV+RAA       AS 
Sbjct: 3   MTSAATGFILTANVPAAIGGGSSKSTTIVSFLPMR----SFGSRLVVRAAEDTPPATASS 62

Query: 66  EAAPPPPAAAPAAATAEEPKPKPAPIGPKRGSKVKILRKESYWYKDVGSVVTVDQDPNTR 125
           +++    AAAPA   A   K KP PIGPKRGSKVKILRKESYWYK+VGSVV VDQDP TR
Sbjct: 63  DSSSTTAAAAPAKVPA--AKAKPPPIGPKRGSKVKILRKESYWYKNVGSVVAVDQDPKTR 122

Query: 126 YPVVVRFNKVNYASVSTNNYALDEIEEV 144
           YPVVVRF KVNYA++STNNYALDE+EEV
Sbjct: 123 YPVVVRFAKVNYANISTNNYALDEVEEV 144

The following BLAST results are available for this feature:

BLAST of CmUC11G214060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441802.1	3.0e-64	97.92	PREDICTED: photosystem I reaction center subunit IV, chloroplastic-like [Cucumis...	[more]
XP_038889433.1	1.1e-63	97.22	photosystem I reaction center subunit IV, chloroplastic-like [Benincasa hispida]	[more]
XP_004152807.2	1.7e-59	93.06	photosystem I reaction center subunit IV, chloroplastic [Cucumis sativus]	[more]
KAE8651724.1	1.7e-59	93.06	hypothetical protein Csa_006032 [Cucumis sativus]	[more]
KAA0061399.1	8.4e-59	98.48	photosystem I reaction center subunit IV [Cucumis melo var. makuwa] >TYK28659.1 ...	[more]

BLAST of CmUC11G214060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q41229	3.7e-33	59.18	Photosystem I reaction center subunit IV B, chloroplastic OS=Nicotiana sylvestri...	[more]
Q41228	9.1e-32	58.74	Photosystem I reaction center subunit IV A, chloroplastic OS=Nicotiana sylvestri...	[more]
Q9S831	3.5e-31	61.59	Photosystem I reaction center subunit IV A, chloroplastic OS=Arabidopsis thalian...	[more]
P12354	5.9e-31	66.67	Photosystem I reaction center subunit IV, chloroplastic OS=Spinacia oleracea OX=...	[more]
P13194	1.0e-27	54.00	Photosystem I reaction center subunit IV, chloroplastic OS=Hordeum vulgare OX=45...	[more]

BLAST of CmUC11G214060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B3T3	1.4e-64	97.92	photosystem I reaction center subunit IV, chloroplastic-like OS=Cucumis melo OX=...	[more]
A0A0A0LJQ1	8.2e-60	93.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G079660 PE=3 SV=1	[more]
A0A5A7V6V9	4.1e-59	98.48	Photosystem I reaction center subunit IV OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1FC09	5.2e-54	86.81	photosystem I reaction center subunit IV, chloroplastic-like OS=Cucurbita moscha...	[more]
A0A6J1HLT8	3.3e-53	86.11	photosystem I reaction center subunit IV, chloroplastic-like OS=Cucurbita maxima...	[more]

BLAST of CmUC11G214060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28750.1	2.5e-32	61.59	Photosystem I reaction centre subunit IV / PsaE protein	[more]
AT2G20260.1	1.3e-28	55.41	photosystem I subunit E-2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003375	Photosystem I PsaE, reaction centre subunit IV	PFAM	PF02427	PSI_PsaE	coord: 84..143 e-value: 6.8E-31 score: 105.8
IPR003375	Photosystem I PsaE, reaction centre subunit IV	PANTHER	PTHR34549	PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC-RELATED	coord: 1..144
None	No IPR available	GENE3D	2.30.30.50		coord: 77..144 e-value: 5.4E-37 score: 127.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..86
None	No IPR available	PANTHER	PTHR34549:SF7	PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A	coord: 1..144
IPR008990	Electron transport accessory-like domain superfamily	SUPERFAMILY	50090	Electron transport accessory proteins	coord: 83..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC11G214060.1	CmUC11G214060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009538	photosystem I reaction center
cellular_component	GO:0009522	photosystem I