CmUC11G212820 (gene) Watermelon (USVL531) v1

Overview
NameCmUC11G212820
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr11: 12398339 .. 12398599 (+)
RNA-Seq ExpressionCmUC11G212820
SyntenyCmUC11G212820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGAAGAATCCTTACCAGTGGTGAGTAGTTTTGAAGCGCAAGAGGTGCCTTCATGGCGGAAGCAATTGACGGCGAGAGCCTTTTGTGGTGAGGTTCGTTTTGAGAGTATAGTTCACTTTCATCGTGATGAACCTCAACTTGACCACCGGTCTTATTCCTCCACTCAATGTCCCTACCGCTCTTCTCGGCTACTTCTTCCACAAGATATGGACCAAATTTCCCCTCAAATCCCTTCTCTCGCCAGGAGAACACTATGA

mRNA sequence

ATGGCTGAAGAATCCTTACCAGTGGTGAGTAGTTTTGAAGCGCAAGAGGTGCCTTCATGGCGGAAGCAATTGACGGCGAGAGCCTTTTGTGGTGAGGTTCGTTTTGAGAGTATAGTTCACTTTCATCGTGATGAACCTCAACTTGACCACCGGTCTTATTCCTCCACTCAATGTCCCTACCGCTCTTCTCGGCTACTTCTTCCACAAGATATGGACCAAATTTCCCCTCAAATCCCTTCTCTCGCCAGGAGAACACTATGA

Coding sequence (CDS)

ATGGCTGAAGAATCCTTACCAGTGGTGAGTAGTTTTGAAGCGCAAGAGGTGCCTTCATGGCGGAAGCAATTGACGGCGAGAGCCTTTTGTGGTGAGGTTCGTTTTGAGAGTATAGTTCACTTTCATCGTGATGAACCTCAACTTGACCACCGGTCTTATTCCTCCACTCAATGTCCCTACCGCTCTTCTCGGCTACTTCTTCCACAAGATATGGACCAAATTTCCCCTCAAATCCCTTCTCTCGCCAGGAGAACACTATGA

Protein sequence

MAEESLPVVSSFEAQEVPSWRKQLTARAFCGEVRFESIVHFHRDEPQLDHRSYSSTQCPYRSSRLLLPQDMDQISPQIPSLARRTL
Homology
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BLAST of CmUC11G212820 vs. ExPASy TrEMBL
Match: A0A2N9HCR9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37425 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.5e-04
Identity = 26/48 (54.17%), Postives = 29/48 (60.42%), Query Frame = 0 

Query: 4  ESLPVVSSFEAQEVPSWRKQLTARAFCGEVRFESIVHFHRDEPQLDHR 52
          + L V   FE Q+VPSWRKQLT RAF   +  E  VH H DE Q  HR
Sbjct: 28 DELSVERIFEKQQVPSWRKQLTVRAFVVSLCVEHTVHLHSDETQPHHR 75

The following BLAST results are available for this feature:
BLAST of CmUC11G212820 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC11G212820 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC11G212820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2N9HCR98.5e-0454.17Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37425 PE=4 SV=1[more]
BLAST of CmUC11G212820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC11G212820.1CmUC11G212820.1mRNA