CmUC11G212660 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC11G212660
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Trinucleotide repeat-containing gene 18 protein-like protein
Location	CmU531Chr11: 12033959 .. 12034546 (+)
RNA-Seq Expression	CmUC11G212660
Synteny	CmUC11G212660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCAATCTTCTCGCCGGACTCATTCTTTCTCTTCTTCTTCTTCTAATTCCCTCTCCTCCTCCTCCGCCTCCTCCTCCTCCCGCGGCTCTTACTATTTTCCCGATGACTCTCCCTTCTCCGCCGCCGCCACTCCGATCCGATCATTCTCCGGCAGCATTCCCTTCTCCTGGGAGCATTTGCCAGGAATCCCTAAAAAACAGTCTCCGGCCAGGCTCCGGCGAGGTTCTTCATCTCCTCTCTCCTCTCTCCTCCCCTTACCACCCAATTCCATCACTCCACCGTCTTCGAAACGCTTCGGGTTTCAAGATTGGAGGAAATCGAACCGCCAAAATTCGCAGCGGGATCCTTTCTTCGACGCCTTCCTCGAGTGCTCTAAGGAACCTACCGCCGCCGCCGTAGACTCTGACCTCTGGACCGGCGCCAGCAATGGTAAGGCGATTACAAGAAGCTTGAGCGATCGATTCGGATTCTTGAATCTGTACTCTTCTTGTAAACGGACCTGCGGCGTTTCGGAATCCATCGTTTACCTGCCGAGAACGCCGAGGAGTTCGTTCGATCTGCTTAACCAGCGTACCGGCGGCTGA

mRNA sequence

ATGTTTCAATCTTCTCGCCGGACTCATTCTTTCTCTTCTTCTTCTTCTAATTCCCTCTCCTCCTCCTCCGCCTCCTCCTCCTCCCGCGGCTCTTACTATTTTCCCGATGACTCTCCCTTCTCCGCCGCCGCCACTCCGATCCGATCATTCTCCGGCAGCATTCCCTTCTCCTGGGAGCATTTGCCAGGAATCCCTAAAAAACAGTCTCCGGCCAGGCTCCGGCGAGGTTCTTCATCTCCTCTCTCCTCTCTCCTCCCCTTACCACCCAATTCCATCACTCCACCGTCTTCGAAACGCTTCGGGTTTCAAGATTGGAGGAAATCGAACCGCCAAAATTCGCAGCGGGATCCTTTCTTCGACGCCTTCCTCGAGTGCTCTAAGGAACCTACCGCCGCCGCCGTAGACTCTGACCTCTGGACCGGCGCCAGCAATGGTAAGGCGATTACAAGAAGCTTGAGCGATCGATTCGGATTCTTGAATCTGTACTCTTCTTGTAAACGGACCTGCGGCGTTTCGGAATCCATCGTTTACCTGCCGAGAACGCCGAGGAGTTCGTTCGATCTGCTTAACCAGCGTACCGGCGGCTGA

Coding sequence (CDS)

ATGTTTCAATCTTCTCGCCGGACTCATTCTTTCTCTTCTTCTTCTTCTAATTCCCTCTCCTCCTCCTCCGCCTCCTCCTCCTCCCGCGGCTCTTACTATTTTCCCGATGACTCTCCCTTCTCCGCCGCCGCCACTCCGATCCGATCATTCTCCGGCAGCATTCCCTTCTCCTGGGAGCATTTGCCAGGAATCCCTAAAAAACAGTCTCCGGCCAGGCTCCGGCGAGGTTCTTCATCTCCTCTCTCCTCTCTCCTCCCCTTACCACCCAATTCCATCACTCCACCGTCTTCGAAACGCTTCGGGTTTCAAGATTGGAGGAAATCGAACCGCCAAAATTCGCAGCGGGATCCTTTCTTCGACGCCTTCCTCGAGTGCTCTAAGGAACCTACCGCCGCCGCCGTAGACTCTGACCTCTGGACCGGCGCCAGCAATGGTAAGGCGATTACAAGAAGCTTGAGCGATCGATTCGGATTCTTGAATCTGTACTCTTCTTGTAAACGGACCTGCGGCGTTTCGGAATCCATCGTTTACCTGCCGAGAACGCCGAGGAGTTCGTTCGATCTGCTTAACCAGCGTACCGGCGGCTGA

Protein sequence

MFQSSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEHLPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFDAFLECSKEPTAAAVDSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPRTPRSSFDLLNQRTGG

Homology

[Close]

BLAST of CmUC11G212660 vs. NCBI nr
Match: XP_038885392.1 (uncharacterized protein LOC120075791 [Benincasa hispida])

HSP 1 Score: 349.0 bits (894), Expect = 2.7e-92
Identity = 185/198 (93.43%), Postives = 191/198 (96.46%), Query Frame = 0


Query: 1   MFQSSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEH 60
           MFQSSRRTHSFSSSSSNSLSSS  SSSSRGSYYFPD+SPFS AATPIRSFSGSIPFSWEH
Sbjct: 1   MFQSSRRTHSFSSSSSNSLSSS--SSSSRGSYYFPDESPFSTAATPIRSFSGSIPFSWEH 60

Query: 61  LPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFD 120
           LPGIPKKQSPARLRRGS+SPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFD
Sbjct: 61  LPGIPKKQSPARLRRGSASPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFD 120

Query: 121 AFLECSKEP-TAAAVDSDLWT--GASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVY 180
           AFLECSKEP TAAAVD++LW+  G SNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVY
Sbjct: 121 AFLECSKEPSTAAAVDAELWSGGGGSNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVY 180

Query: 181 LPRTPRSSFDLLNQRTGG 196
           LPRTPRSSFDLLNQR+GG
Sbjct: 181 LPRTPRSSFDLLNQRSGG 196

[Close]

BLAST of CmUC11G212660 vs. NCBI nr
Match: XP_008441227.1 (PREDICTED: uncharacterized protein LOC103485423 [Cucumis melo] >KAA0037005.1 trinucleotide repeat-containing gene 18 protein-like protein [Cucumis melo var. makuwa] >TYK06646.1 trinucleotide repeat-containing gene 18 protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 347.1 bits (889), Expect = 1.0e-91
Identity = 179/195 (91.79%), Postives = 188/195 (96.41%), Query Frame = 0


Query: 1   MFQSSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEH 60
           MFQSSRRTHSFSSSSSNSLSSSS+SSSSRGSYYFP +SPFSA+ATPIRSFSG+IPFSWEH
Sbjct: 1   MFQSSRRTHSFSSSSSNSLSSSSSSSSSRGSYYFPGESPFSASATPIRSFSGNIPFSWEH 60

Query: 61  LPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFD 120
           LPGIPKKQSPARLRRGS+SPLSSLLPLPPNS T  SSKRFGFQDWRKSNRQN QRDPFFD
Sbjct: 61  LPGIPKKQSPARLRRGSASPLSSLLPLPPNSTTLSSSKRFGFQDWRKSNRQNPQRDPFFD 120

Query: 121 AFLECSKEPTAAAVDSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 180
           AFLECSKEPT AAVD++LW+GASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR
Sbjct: 121 AFLECSKEPTNAAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 180

Query: 181 TPRSSFDLLNQRTGG 196
           TP SSFDLLNQR+GG
Sbjct: 181 TPTSSFDLLNQRSGG 195

[Close]

BLAST of CmUC11G212660 vs. NCBI nr
Match: XP_011649907.1 (uncharacterized protein LOC105434677 [Cucumis sativus])

HSP 1 Score: 342.0 bits (876), Expect = 3.3e-90
Identity = 182/197 (92.39%), Postives = 188/197 (95.43%), Query Frame = 0


Query: 1   MFQSSRRTHSFSS-SSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWE 60
           MFQSSRRTHSFSS SSSNSLSSS  SSSSRGSYYFPDDSPFSAAATPIRSFSG+IPFSWE
Sbjct: 1   MFQSSRRTHSFSSASSSNSLSSS--SSSSRGSYYFPDDSPFSAAATPIRSFSGNIPFSWE 60

Query: 61  HLPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFF 120
           HLPGIPKKQSPARLRRGS+SPLSS LPLPPNS TP SSKRFGFQDWRKSNRQN+QRDPFF
Sbjct: 61  HLPGIPKKQSPARLRRGSASPLSSFLPLPPNSTTPSSSKRFGFQDWRKSNRQNAQRDPFF 120

Query: 121 DAFLECSKEPT-AAAVDSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYL 180
           DAFLECSKEPT AAAVD++LW+G SNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYL
Sbjct: 121 DAFLECSKEPTNAAAVDAELWSGGSNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYL 180

Query: 181 PRTPRSSFDLLNQRTGG 196
           PRT RSSFDLLNQRTGG
Sbjct: 181 PRTERSSFDLLNQRTGG 195

[Close]

BLAST of CmUC11G212660 vs. NCBI nr
Match: KAG7015908.1 (hypothetical protein SDJN02_21012, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317.4 bits (812), Expect = 8.7e-83
Identity = 165/195 (84.62%), Postives = 180/195 (92.31%), Query Frame = 0


Query: 1   MFQSSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEH 60
           MFQSSRR+HSFSSSSS+SLSSSS+SSSSRGS YFP++SPFSAAATP+R+FSGSIPFSWEH
Sbjct: 1   MFQSSRRSHSFSSSSSSSLSSSSSSSSSRGSCYFPNNSPFSAAATPVRTFSGSIPFSWEH 60

Query: 61  LPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFD 120
           LPGIPKKQSPARLRR S+SPL+SLLPLPPNS T PSSKR GFQDWRKSN Q SQRDPFFD
Sbjct: 61  LPGIPKKQSPARLRRDSASPLTSLLPLPPNSSTQPSSKRLGFQDWRKSNCQYSQRDPFFD 120

Query: 121 AFLECSKEPTAAAVDSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 180
           AF+ECSKEP AA   ++LW G SNGK ++RSLSDRFGF+NLYSSCKRTC VSESIVYLPR
Sbjct: 121 AFIECSKEPAAA---TELWRGDSNGKTVSRSLSDRFGFMNLYSSCKRTCSVSESIVYLPR 180

Query: 181 TPRSSFDLLNQRTGG 196
           TPRSSFDLLNQRTGG
Sbjct: 181 TPRSSFDLLNQRTGG 192

[Close]

BLAST of CmUC11G212660 vs. NCBI nr
Match: XP_023549797.1 (putative protein TPRXL [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311.6 bits (797), Expect = 4.8e-81
Identity = 165/199 (82.91%), Postives = 180/199 (90.45%), Query Frame = 0


Query: 1   MFQSSRRTHSFSSSSSNSL----SSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPF 60
           MFQSSRR+HSFSSSSS+SL    SSSS+SSSSRGS YFP++SPFSAAATP+R+FSGSIPF
Sbjct: 1   MFQSSRRSHSFSSSSSSSLSSSSSSSSSSSSSRGSCYFPNNSPFSAAATPVRTFSGSIPF 60

Query: 61  SWEHLPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRD 120
           SWEHLPGIPKKQSPARLRR S+SPL+SLLPLPPNS T PSSKR GFQDWRKSN Q SQRD
Sbjct: 61  SWEHLPGIPKKQSPARLRRDSASPLTSLLPLPPNSSTQPSSKRLGFQDWRKSNCQYSQRD 120

Query: 121 PFFDAFLECSKEPTAAAVDSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIV 180
           PFFDAF+ECSKEP AA   ++LW G SNGK ++RSLSDRFGF+NLYSSCKRTC VSESIV
Sbjct: 121 PFFDAFIECSKEPAAA---TELWRGDSNGKTVSRSLSDRFGFMNLYSSCKRTCSVSESIV 180

Query: 181 YLPRTPRSSFDLLNQRTGG 196
           YLPRTPRSSFDLLNQRTGG
Sbjct: 181 YLPRTPRSSFDLLNQRTGG 196

[Close]

BLAST of CmUC11G212660 vs. ExPASy TrEMBL
Match: A0A5D3C8I6 (Trinucleotide repeat-containing gene 18 protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001240 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.9e-92
Identity = 179/195 (91.79%), Postives = 188/195 (96.41%), Query Frame = 0


Query: 1   MFQSSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEH 60
           MFQSSRRTHSFSSSSSNSLSSSS+SSSSRGSYYFP +SPFSA+ATPIRSFSG+IPFSWEH
Sbjct: 1   MFQSSRRTHSFSSSSSNSLSSSSSSSSSRGSYYFPGESPFSASATPIRSFSGNIPFSWEH 60

Query: 61  LPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFD 120
           LPGIPKKQSPARLRRGS+SPLSSLLPLPPNS T  SSKRFGFQDWRKSNRQN QRDPFFD
Sbjct: 61  LPGIPKKQSPARLRRGSASPLSSLLPLPPNSTTLSSSKRFGFQDWRKSNRQNPQRDPFFD 120

Query: 121 AFLECSKEPTAAAVDSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 180
           AFLECSKEPT AAVD++LW+GASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR
Sbjct: 121 AFLECSKEPTNAAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 180

Query: 181 TPRSSFDLLNQRTGG 196
           TP SSFDLLNQR+GG
Sbjct: 181 TPTSSFDLLNQRSGG 195

[Close]

BLAST of CmUC11G212660 vs. ExPASy TrEMBL
Match: A0A1S3B2H5 (uncharacterized protein LOC103485423 OS=Cucumis melo OX=3656 GN=LOC103485423 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.9e-92
Identity = 179/195 (91.79%), Postives = 188/195 (96.41%), Query Frame = 0


Query: 1   MFQSSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEH 60
           MFQSSRRTHSFSSSSSNSLSSSS+SSSSRGSYYFP +SPFSA+ATPIRSFSG+IPFSWEH
Sbjct: 1   MFQSSRRTHSFSSSSSNSLSSSSSSSSSRGSYYFPGESPFSASATPIRSFSGNIPFSWEH 60

Query: 61  LPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFD 120
           LPGIPKKQSPARLRRGS+SPLSSLLPLPPNS T  SSKRFGFQDWRKSNRQN QRDPFFD
Sbjct: 61  LPGIPKKQSPARLRRGSASPLSSLLPLPPNSTTLSSSKRFGFQDWRKSNRQNPQRDPFFD 120

Query: 121 AFLECSKEPTAAAVDSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 180
           AFLECSKEPT AAVD++LW+GASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR
Sbjct: 121 AFLECSKEPTNAAVDAELWSGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPR 180

Query: 181 TPRSSFDLLNQRTGG 196
           TP SSFDLLNQR+GG
Sbjct: 181 TPTSSFDLLNQRSGG 195

[Close]

BLAST of CmUC11G212660 vs. ExPASy TrEMBL
Match: A0A6J1GNZ5 (uncharacterized protein LOC111456137 OS=Cucurbita moschata OX=3662 GN=LOC111456137 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.6e-74
Identity = 159/200 (79.50%), Postives = 170/200 (85.00%), Query Frame = 0


Query: 1   MFQSSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEH 60
           MFQSSRRT SFSSSS +  SSSS+SSSSRGSYYFPDDSP S AATPIRSFSGSIPFSWE+
Sbjct: 1   MFQSSRRTRSFSSSSPS--SSSSSSSSSRGSYYFPDDSPLS-AATPIRSFSGSIPFSWEY 60

Query: 61  LPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFD 120
           LPGIPKKQSPARLR  S+SPL+SLLPLPP S T PSSKRFGF DWRKSNRQNSQRDPFFD
Sbjct: 61  LPGIPKKQSPARLRLDSASPLTSLLPLPPISTTLPSSKRFGFHDWRKSNRQNSQRDPFFD 120

Query: 121 AFLECSKEPTAAAV-----DSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESI 180
           AF+ECSKEP+AA        ++LW   SNGKA++RSLSDRFGFLN  SSCKRTCGVSESI
Sbjct: 121 AFVECSKEPSAATAAEQDPTAELWNSGSNGKAVSRSLSDRFGFLNPNSSCKRTCGVSESI 180

Query: 181 VYLPRTPRSSFDLLNQRTGG 196
           VY PR  RSSFDLLN R GG
Sbjct: 181 VYRPRRGRSSFDLLNHRNGG 197

[Close]

BLAST of CmUC11G212660 vs. ExPASy TrEMBL
Match: A0A6J1JTM6 (uncharacterized protein LOC111487739 OS=Cucurbita maxima OX=3661 GN=LOC111487739 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.6e-74
Identity = 158/200 (79.00%), Postives = 169/200 (84.50%), Query Frame = 0


Query: 1   MFQSSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEH 60
           MFQSSRRT SFSSSSS   SSSS+SSSSRGSYYFPDDSP S AATPIRSFSGSIPFSWE+
Sbjct: 1   MFQSSRRTRSFSSSSS---SSSSSSSSSRGSYYFPDDSPLS-AATPIRSFSGSIPFSWEY 60

Query: 61  LPGIPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFD 120
           LPGIPKKQSPARLR  S+SPL+ LLPLPP S   PSSKRFGF DWRKSNRQNSQRDPFFD
Sbjct: 61  LPGIPKKQSPARLRLDSASPLTFLLPLPPISTALPSSKRFGFHDWRKSNRQNSQRDPFFD 120

Query: 121 AFLECSKEPTAAAV-----DSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESI 180
           AF+ECSKEP+AA        ++LW   SNGKA++RSLSDRFGFLN YSSCKRTC VSESI
Sbjct: 121 AFVECSKEPSAATAAEQDPTAELWNSGSNGKAVSRSLSDRFGFLNPYSSCKRTCSVSESI 180

Query: 181 VYLPRTPRSSFDLLNQRTGG 196
           VY PR  RSSFDLLN R+GG
Sbjct: 181 VYRPRRGRSSFDLLNHRSGG 196

[Close]

BLAST of CmUC11G212660 vs. ExPASy TrEMBL
Match: A0A6J1DE38 (uncharacterized protein LOC111020211 OS=Momordica charantia OX=3673 GN=LOC111020211 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 5.1e-73
Identity = 156/193 (80.83%), Postives = 172/193 (89.12%), Query Frame = 0


Query: 1   MFQSSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEH 60
           MFQSSRRTHSFSSS     SS S+SSSSRGSYYFPDDSP S +ATPIRSFSG+IPFSWEH
Sbjct: 1   MFQSSRRTHSFSSS-----SSLSSSSSSRGSYYFPDDSPLS-SATPIRSFSGAIPFSWEH 60

Query: 61  LPGIPKK-QSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFF 120
           LPGIPKK QSPARLR+ S+SPL+SLLPLPPNS TPPSSKRFGFQ+WRKSNR NSQRDPFF
Sbjct: 61  LPGIPKKLQSPARLRQDSASPLTSLLPLPPNSTTPPSSKRFGFQEWRKSNRHNSQRDPFF 120

Query: 121 DAFLECSKEPTAAAVDSDLWT---GASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIV 180
           DAF+ECSK+  +AA  ++LW+   G++ GKAI+RSLSDRFGFLNLYSSCKRTCGVSESIV
Sbjct: 121 DAFVECSKDRASAA--AELWSGGGGSNGGKAISRSLSDRFGFLNLYSSCKRTCGVSESIV 180

Query: 181 YLPRTPRSSFDLL 190
            LPRTPRSSFDLL
Sbjct: 181 CLPRTPRSSFDLL 185

[Close]

BLAST of CmUC11G212660 vs. TAIR 10
Match: AT1G71970.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22680.1); Has 58 Blast hits to 58 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 104.8 bits (260), Expect = 8.2e-23
Identity = 92/209 (44.02%), Postives = 120/209 (57.42%), Query Frame = 0


Query: 4   SSRRTHSFSSSSSNSLSSSSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEHLPG 63
           SSRR    S SSS+S SS S+ SSS  S  FP DSP ++ ATP+R     +PFSWE LPG
Sbjct: 25  SSRR----SLSSSSSFSSFSSCSSS--SLVFPGDSPLNSPATPLRLL--GVPFSWEQLPG 84

Query: 64  IPKKQSPARLRRGSSSPLSSLLPLPP--NSITPPSSKRFGFQDWRKSNRQNS----QRDP 123
            PK  S     R ++   + LLPLPP  N   P + K+        S+++NS     +DP
Sbjct: 85  KPKDYSHRLNNRRNNESSNLLLPLPPHRNISFPATGKK---PKPNNSSKKNSFPVTGKDP 144

Query: 124 FFDAFLECSK-EPTAAAVDSDL---------WTGASNG--KAITR-SLSDRFGFLNLYSS 183
           F  A LECSK E T +  D D+         + G S G  K +++ S+ DRFG +NLY S
Sbjct: 145 FAAALLECSKDEGTNSDNDDDVDGVEDVDRRFRGNSGGSSKVLSKNSIGDRFGLVNLYGS 204

Query: 184 CKRTCGVSESIVYLPRTPR-SSFDLLNQR 193
           C+RTC V+ESIVYLPR  + +S+D L  R
Sbjct: 205 CRRTCAVTESIVYLPRARKAASYDNLLPR 222

[Close]

BLAST of CmUC11G212660 vs. TAIR 10
Match: AT1G22680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71970.1); Has 44 Blast hits to 44 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.4 bits (228), Expect = 4.2e-19
Identity = 81/192 (42.19%), Postives = 109/192 (56.77%), Query Frame = 0


Query: 5   SRRTHSFSSSSSNSLSS-SSASSSSRGSYYFPDDSPFSAAATPIRSFSGSIPFSWEHLPG 64
           +RR++S   SS+ ++S+  S SSSS  S  F  +SP    ATP+      IPFSWE LPG
Sbjct: 12  TRRSNSVKFSSTVNISTRRSLSSSSSNSLLFSGNSP----ATPLHPL--GIPFSWEKLPG 71

Query: 65  IPKKQSPARLRRGSSSPLSSLLPLPPNSITPPSSKRFGFQDWRKSNRQNSQRDPFFDAFL 124
            PK+ S  R     +  LS+LLPLPP+      + R      +K+    + RDPF  A +
Sbjct: 72  KPKEFSYHR----KNESLSNLLPLPPHWSNHSPNTR-----CKKNTSPAAMRDPFMAALV 131

Query: 125 ECSKEPTAAAVDSDLWTGASNGKAITRSLSDRFGFLNLYSSCKRTCGVSESIVYLPRTPR 184
           ECSK    A  D +  TG  + K + +S S   G LNLYSSC+R C VSESIVYLP++  
Sbjct: 132 ECSK---GATTDGE-HTGGESRKVLRKSRS--IGLLNLYSSCRRACEVSESIVYLPKS-I 181

Query: 185 SSFDLLNQRTGG 196
           +S+D L+  T G
Sbjct: 192 ASYDHLHLSTRG 181

The following BLAST results are available for this feature:

BLAST of CmUC11G212660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885392.1	2.7e-92	93.43	uncharacterized protein LOC120075791 [Benincasa hispida]	[more]
XP_008441227.1	1.0e-91	91.79	PREDICTED: uncharacterized protein LOC103485423 [Cucumis melo] >KAA0037005.1 tri...	[more]
XP_011649907.1	3.3e-90	92.39	uncharacterized protein LOC105434677 [Cucumis sativus]	[more]
KAG7015908.1	8.7e-83	84.62	hypothetical protein SDJN02_21012, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023549797.1	4.8e-81	82.91	putative protein TPRXL [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmUC11G212660 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC11G212660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C8I6	4.9e-92	91.79	Trinucleotide repeat-containing gene 18 protein-like protein OS=Cucumis melo var...	[more]
A0A1S3B2H5	4.9e-92	91.79	uncharacterized protein LOC103485423 OS=Cucumis melo OX=3656 GN=LOC103485423 PE=...	[more]
A0A6J1GNZ5	1.6e-74	79.50	uncharacterized protein LOC111456137 OS=Cucurbita moschata OX=3662 GN=LOC1114561...	[more]
A0A6J1JTM6	4.6e-74	79.00	uncharacterized protein LOC111487739 OS=Cucurbita maxima OX=3661 GN=LOC111487739...	[more]
A0A6J1DE38	5.1e-73	80.83	uncharacterized protein LOC111020211 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of CmUC11G212660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71970.1	8.2e-23	44.02	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G22680.1	4.2e-19	42.19	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..98
None	No IPR available	PANTHER	PTHR33696	T22J18.15-RELATED	coord: 3..184
None	No IPR available	PANTHER	PTHR33696:SF1	T22J18.15	coord: 3..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC11G212660.1	CmUC11G212660.1	mRNA