CmUC11G212310 (gene) Watermelon (USVL531) v1

Overview
NameCmUC11G212310
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr11: 11071055 .. 11071382 (-)
RNA-Seq ExpressionCmUC11G212310
SyntenyCmUC11G212310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTATGAGAAGGAAGCGACCGGATTACGAAGGTCACATTGGATAATTTTTTGCACCCAACTTCCTTGTATCACCTGGAACCTTAAACGTTGCCGTCCTTAGCGGGCAGATTCCGACTAACTTCCATAGCCTTAGAAGAGGAAGGAGCGATGGAGTTGGTCCCTTTGGACGGCGCTGACGACGGCGATGGTAACTTCTTTGGCAACATCTGCTCCCAATATGGTCTGGGAACTCTGGCCGCGTCAGAGGAAACGGAAGCGAGAGTGAGAAGCAGTGTTAAGAAGAGAATGAATCTAAGGTTGAAAGAAAGTAACATGGTGATATGA

mRNA sequence

ATGATTATGAGAAGGAAGCGACCGGATTACGAAGCGGGCAGATTCCGACTAACTTCCATAGCCTTAGAAGAGGAAGGAGCGATGGAGTTGGTCCCTTTGGACGGCGCTGACGACGGCGATGGTAACTTCTTTGGCAACATCTGCTCCCAATATGGTCTGGGAACTCTGGCCGCGTCAGAGGAAACGGAAGCGAGAGTGAGAAGCAGTGTTAAGAAGAGAATGAATCTAAGGTTGAAAGAAAGTAACATGGTGATATGA

Coding sequence (CDS)

ATGATTATGAGAAGGAAGCGACCGGATTACGAAGCGGGCAGATTCCGACTAACTTCCATAGCCTTAGAAGAGGAAGGAGCGATGGAGTTGGTCCCTTTGGACGGCGCTGACGACGGCGATGGTAACTTCTTTGGCAACATCTGCTCCCAATATGGTCTGGGAACTCTGGCCGCGTCAGAGGAAACGGAAGCGAGAGTGAGAAGCAGTGTTAAGAAGAGAATGAATCTAAGGTTGAAAGAAAGTAACATGGTGATATGA

Protein sequence

MIMRRKRPDYEAGRFRLTSIALEEEGAMELVPLDGADDGDGNFFGNICSQYGLGTLAASEETEARVRSSVKKRMNLRLKESNMVI
Homology
BLAST of CmUC11G212310 vs. NCBI nr
Match: KAG6592140.1 (hypothetical protein SDJN03_14486, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 88.2 bits (217), Expect = 3.7e-14
Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 0

Query: 23 EEEGAMELVPLDGADDGDGNFFGNICSQYGLGTLAASEETEARVRSSVKKRMNLRLKESN 82
          +EEG+ E  P DGA+DGDGNF GNICSQY LGTLAAS+ETE +  ++VK + NLRLKE N
Sbjct: 24 DEEGSTEFDPFDGAEDGDGNFLGNICSQYALGTLAASDETETKATTTVKNKTNLRLKERN 83

Query: 83 MV 85
          M+
Sbjct: 84 MM 85

BLAST of CmUC11G212310 vs. NCBI nr
Match: TKY56065.1 (Wall-associated receptor kinase 2 [Spatholobus suberectus])

HSP 1 Score: 58.5 bits (140), Expect = 3.2e-05
Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 0

Query: 23  EEEGAMELVPLDGADDGDGNFFGNICSQYGLGTLAASEET 63
           EEEGA E VPL+G ++G+GN FGNICSQY  G L  S+ T
Sbjct: 324 EEEGATEFVPLEGEEEGEGNLFGNICSQYSFGNLDPSDRT 363

BLAST of CmUC11G212310 vs. ExPASy TrEMBL
Match: A0A0A0K3C9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G219800 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.0e-22
Identity = 60/81 (74.07%), Postives = 65/81 (80.25%), Query Frame = 0

Query: 5   RKRPDYEAGRFRLTSIALEEEGAMELVPLDGADDGDGNFFGNICSQYGLGTLAASEETEA 64
           RKRP     RF LT I LEE+GA   VPLDGADDG+GNF GNICSQYG+GTLAAS E E 
Sbjct: 58  RKRPALR--RFPLTFIGLEEDGATVFVPLDGADDGEGNFLGNICSQYGVGTLAASVEMEV 117

Query: 65  RVRSSVKKRMNLRLKESNMVI 86
           R R+SVKKRMNL+LKESNMVI
Sbjct: 118 RARTSVKKRMNLKLKESNMVI 136

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6592140.13.7e-1466.13hypothetical protein SDJN03_14486, partial [Cucurbita argyrosperma subsp. sorori... [more]
TKY56065.13.2e-0562.50Wall-associated receptor kinase 2 [Spatholobus suberectus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K3C94.0e-2274.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G219800 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC11G212310.1CmUC11G212310.1mRNA