CmUC11G211810 (gene) Watermelon (USVL531) v1

Overview
NameCmUC11G211810
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionProtein TIC 214
LocationCmU531Chr11: 8297775 .. 8299073 (+)
RNA-Seq ExpressionCmUC11G211810
SyntenyCmUC11G211810
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAAATGAAACTTCTCGAAAAAATGATAGTGAGAATGTTTGGACAAATAAGATTCATGCTATCTTTCTTAATACTAATTACCTACAAATTGAAGATAAAATTGAGTCAGAAGATCGAATAAAATCTTTAAACTTTTTATTCGATGCAATTATAACTCCTTACAATGCTAAAGCAAGTCGTTAAAACTCGATTGGAATAAGAGAAATCAGTAAAAAAGTTCCTCAATGGTCATCAAAATTAATCGACGAGTTAGAACAAATGGAAGGAGAAAACGAAGAAAGTATGGCGGAAGATCATGAAATTCGTTCAAGAAAAGCCAAACGTGTCGTAATTTTTACTAATAATCGAGAAACTAACGATACTTATACTAATACCAAAGATACTAATAATCCTGCTGAAACAGACGAAGTTGCTTTGATACGGTATTCCCAACAATTGGATTTTCGTCAAGACATAATCAAAGGTTCTCTGCGTGCTCAACGACGTAAAACAATTACTTGGAAACTATTTCAAGCAAATGTACATTCTTATCTTTTTTTTGACAGACTAGACAAATCTTTTTTTTTTTTTTTCTTTTGATATTCCTGGACTAACGAAAACACTTTTTCGACCTTGGATATGGACAAACACAGAATTGACTATTTCGGATAATAGAGAAGAAAAGACAAGCGAAAATCAGAACAAAGAGGCAGACATAAGAGAAACACAGAAAAGAGAGGAAAAAGCACGTATAGAAATAGCAGAAACCTAGGATAGCATTCTATTTGCTCAAGTAATAAGAGGTTTGTTGTTAGTAACTCAATTAATTCTTAGAAAATATATTGTCTTACCCTCATTAATTATAGCTAAAAATCTTATCCATATGCTATTATTTCAATTTCCTGAATGGTCCGAGGATTTTAAAAATTGGAATAAATAAATGCATGTAAAGTGCATGGTGTTCAATTATCAAAAAAAGAATTTCCAAAAAATTGGTTAACGGACGGTATTCAAATAAAGATCTTATTTCCTTTTCGTCTGAAACCATAGCACACATCTAGGTTACAATCCCCTAATAAAGATTCAATAAAAAAGAAAGGACAAAAAATTGATTTTTGTTTTCTAACAGTTTGGGGAATGGAAGCTGAACTGCCTTTTGGTTCTCCCCGAAAACAACTTTCGTTTTTTGAACCCATGTTAATAAAAGAACTCGAAAAAAAAATTAAAAAATGGAAAAAGAAGCGCTTTCCAATTCTAAGACTTTTAAAAGAAAGAACAAACTTGTTTATAAATATCTCAAAAGAAACAAAAAACTAG

mRNA sequence

ATGCTAAATGAAACTTCTCGAAAAAATGATAGTGAGAATGTTTGGACAAATAAGATTCATGCTATCTTTCTTAATACTAATTACCTACAAATTGAAGATAAAATTGAGTCAGAAGATCGAATAAAATCTTTAAACTTTTTATTCGATGCAATTATAACTCCTTACAATGCTAAAGCAAGTCAAATCAGTAAAAAAGTTCCTCAATGGTCATCAAAATTAATCGACGAGTTAGAACAAATGGAAGGAGAAAACGAAGAAAGTATGGCGGAAGATCATGAAATTCGTTCAAGAAAAGCCAAACGTGTCGTAATTTTTACTAATAATCGAGAAACTAACGATACTTATACTAATACCAAAGATACTAATAATCCTGCTGAAACAGACGAAGTTGCTTTGATACGGTATTCCCAACAATTGGATTTTCGTCAAGACATAATCAAAGGTTCTCTGCGTGCTCAACGACGTAAAACAATTACTTGGAAACTATTTCAAGCAAATACAAATCTTTTTTTTTTTTTTTCTTTTGATATTCCTGGACTAACGAAAACACTTTTTCGACCTTGGATATGGACAAACACAGAATTGACTATTTCGGATAATAGAGAAGAAAAGACAAGCGAAAATCAGAACAAAGAGGCAGACATAAGAGAAACACAGAAAAGAGAGGAAAAAGCACTTTGGGGAATGGAAGCTGAACTGCCTTTTGGTTCTCCCCGAAAACAACTTTCGTTTTTTGAACCCATGTTAATAAAAGAACTCGAAAAAAAAATTAAAAAATGGAAAAAGAAGCGCTTTCCAATTCTAAGACTTTTAAAAGAAAGAACAAACTTGTTTATAAATATCTCAAAAGAAACAAAAAACTAG

Coding sequence (CDS)

ATGCTAAATGAAACTTCTCGAAAAAATGATAGTGAGAATGTTTGGACAAATAAGATTCATGCTATCTTTCTTAATACTAATTACCTACAAATTGAAGATAAAATTGAGTCAGAAGATCGAATAAAATCTTTAAACTTTTTATTCGATGCAATTATAACTCCTTACAATGCTAAAGCAAGTCAAATCAGTAAAAAAGTTCCTCAATGGTCATCAAAATTAATCGACGAGTTAGAACAAATGGAAGGAGAAAACGAAGAAAGTATGGCGGAAGATCATGAAATTCGTTCAAGAAAAGCCAAACGTGTCGTAATTTTTACTAATAATCGAGAAACTAACGATACTTATACTAATACCAAAGATACTAATAATCCTGCTGAAACAGACGAAGTTGCTTTGATACGGTATTCCCAACAATTGGATTTTCGTCAAGACATAATCAAAGGTTCTCTGCGTGCTCAACGACGTAAAACAATTACTTGGAAACTATTTCAAGCAAATACAAATCTTTTTTTTTTTTTTTCTTTTGATATTCCTGGACTAACGAAAACACTTTTTCGACCTTGGATATGGACAAACACAGAATTGACTATTTCGGATAATAGAGAAGAAAAGACAAGCGAAAATCAGAACAAAGAGGCAGACATAAGAGAAACACAGAAAAGAGAGGAAAAAGCACTTTGGGGAATGGAAGCTGAACTGCCTTTTGGTTCTCCCCGAAAACAACTTTCGTTTTTTGAACCCATGTTAATAAAAGAACTCGAAAAAAAAATTAAAAAATGGAAAAAGAAGCGCTTTCCAATTCTAAGACTTTTAAAAGAAAGAACAAACTTGTTTATAAATATCTCAAAAGAAACAAAAAACTAG

Protein sequence

MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAIITPYNAKASQISKKVPQWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTNNRETNDTYTNTKDTNNPAETDEVALIRYSQQLDFRQDIIKGSLRAQRRKTITWKLFQANTNLFFFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREEKALWGMEAELPFGSPRKQLSFFEPMLIKELEKKIKKWKKKRFPILRLLKERTNLFINISKETKN
Homology
BLAST of CmUC11G211810 vs. NCBI nr
Match: QZL38742.1 (Ycf1 protein [Citrullus ecirrhosus])

HSP 1 Score: 465.7 bits (1197), Expect = 2.9e-127
Identity = 273/433 (63.05%), Postives = 283/433 (65.36%), Query Frame = 0

Query: 1   MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAIITPYNAKAS 60
           MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDA+ITPY AKAS
Sbjct: 522 MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAVITPYKAKAS 581

Query: 61  --------QISKKVPQWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTNNRETN 120
                   +ISKKVP+WSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFT+NRET+
Sbjct: 582 RQNSIGIREISKKVPRWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTDNRETS 641

Query: 121 DTYTNTKDTNNPAETDEVALIRYSQQLDFRQDIIKGSLRAQRRKTITWKLFQANTNLF-- 180
           DTYTNTKDTNNPAETDEVALIRYSQQ DFR+DIIKGSLRAQRRKT+TWKLFQAN + +  
Sbjct: 642 DTYTNTKDTNNPAETDEVALIRYSQQSDFRRDIIKGSLRAQRRKTVTWKLFQANVHSYLF 701

Query: 181 -------FFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 240
                  FFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE
Sbjct: 702 FDRLDKSFFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 761

Query: 241 KA---------------------------------------------------------- 288
           KA                                                          
Sbjct: 762 KARIEIAETWDSILFAQVIRGLLLVTQSILRKYIVLPSLIIAKNLIRMLLFQFPEWSEDF 821

BLAST of CmUC11G211810 vs. NCBI nr
Match: YP_009431615.1 (Ycf1 [Citrullus amarus] >APW82521.1 Ycf1 [Citrullus lanatus subsp. vulgaris] >ASY96227.1 Ycf1 [Citrullus amarus])

HSP 1 Score: 465.7 bits (1197), Expect = 2.9e-127
Identity = 273/433 (63.05%), Postives = 283/433 (65.36%), Query Frame = 0

Query: 1   MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAIITPYNAKAS 60
           MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDA+ITPYNAKAS
Sbjct: 522 MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAVITPYNAKAS 581

Query: 61  --------QISKKVPQWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTNNRETN 120
                   +ISKKVP+WSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFT+NRET+
Sbjct: 582 RQNSIGIREISKKVPRWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTDNRETS 641

Query: 121 DTYTNTKDTNNPAETDEVALIRYSQQLDFRQDIIKGSLRAQRRKTITWKLFQANTNLF-- 180
           DTYTNTKDTNNPAETDEVALIRYSQQ DFR+DIIKGSLRAQRRKT+TWKLFQAN + +  
Sbjct: 642 DTYTNTKDTNNPAETDEVALIRYSQQSDFRRDIIKGSLRAQRRKTVTWKLFQANVHSYLF 701

Query: 181 -------FFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 240
                  FFFSFDIPGLTK LFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE
Sbjct: 702 FDRLDKSFFFSFDIPGLTKKLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 761

Query: 241 KA---------------------------------------------------------- 288
           KA                                                          
Sbjct: 762 KARIEIAETWDSILFAQVIRGLLLVTQSILRKYIVLPSLIIAKNLIRMLLFQFPEWSEDF 821

BLAST of CmUC11G211810 vs. NCBI nr
Match: APW82606.1 (Ycf1 [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 465.7 bits (1197), Expect = 2.9e-127
Identity = 273/433 (63.05%), Postives = 283/433 (65.36%), Query Frame = 0

Query: 1   MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAIITPYNAKAS 60
           MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDA+ITPYNAKAS
Sbjct: 522 MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAVITPYNAKAS 581

Query: 61  --------QISKKVPQWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTNNRETN 120
                   +ISKKVP+WSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFT+NRET+
Sbjct: 582 RQNSIGIREISKKVPRWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTDNRETS 641

Query: 121 DTYTNTKDTNNPAETDEVALIRYSQQLDFRQDIIKGSLRAQRRKTITWKLFQANTNLF-- 180
           DTYTNTKDTNNPAETDEVALIRYSQQ DFR+DIIKGSLRAQRRKT+TWKLFQAN + +  
Sbjct: 642 DTYTNTKDTNNPAETDEVALIRYSQQSDFRRDIIKGSLRAQRRKTVTWKLFQANVHSYLF 701

Query: 181 -------FFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 240
                  FFFSFDIPGLTK LFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE
Sbjct: 702 FDRLDKSFFFSFDIPGLTKKLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 761

Query: 241 KA---------------------------------------------------------- 288
           KA                                                          
Sbjct: 762 KARIEIAETWDSILFAQVIRGLLLVTQSILRKYIVLPSLIIAKNLIRMLLFQFPEWSEDF 821

BLAST of CmUC11G211810 vs. NCBI nr
Match: YP_009420853.1 (Ycf1 [Citrullus colocynthis] >ASP44532.1 Ycf1 [Citrullus colocynthis])

HSP 1 Score: 464.9 bits (1195), Expect = 4.9e-127
Identity = 272/433 (62.82%), Postives = 283/433 (65.36%), Query Frame = 0

Query: 1   MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAIITPYNAKAS 60
           MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDA+ITPYNAKAS
Sbjct: 1   MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAVITPYNAKAS 60

Query: 61  --------QISKKVPQWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTNNRETN 120
                   +I KKVP+WSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFT+NRET+
Sbjct: 61  RQNSIGIREIRKKVPRWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTDNRETS 120

Query: 121 DTYTNTKDTNNPAETDEVALIRYSQQLDFRQDIIKGSLRAQRRKTITWKLFQANTNLF-- 180
           DTYTNTKDTNNPA+TDEVALIRYSQQ DFR+DIIKGSLRAQRRKT+TWKLFQAN + +  
Sbjct: 121 DTYTNTKDTNNPAQTDEVALIRYSQQSDFRRDIIKGSLRAQRRKTVTWKLFQANVHSYLF 180

Query: 181 -------FFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 240
                  FFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE
Sbjct: 181 FDRLDKSFFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 240

Query: 241 KA---------------------------------------------------------- 288
           KA                                                          
Sbjct: 241 KARIEIAETWDSILFAQVIRGLLLVTQSILRKYIVLPSLIIAKNLIRMLLFQFPEWSEDF 300

BLAST of CmUC11G211810 vs. NCBI nr
Match: YP_009431701.1 (Ycf1 [Citrullus rehmii] >ASY96312.1 Ycf1 [Citrullus rehmii])

HSP 1 Score: 464.9 bits (1195), Expect = 4.9e-127
Identity = 272/433 (62.82%), Postives = 283/433 (65.36%), Query Frame = 0

Query: 1   MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAIITPYNAKAS 60
           MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDA+ITPYNAKAS
Sbjct: 522 MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAVITPYNAKAS 581

Query: 61  --------QISKKVPQWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTNNRETN 120
                   +I KKVP+WSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFT+NRET+
Sbjct: 582 RQNSIGIREIRKKVPRWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTDNRETS 641

Query: 121 DTYTNTKDTNNPAETDEVALIRYSQQLDFRQDIIKGSLRAQRRKTITWKLFQANTNLF-- 180
           DTYTNTKDTNNPA+TDEVALIRYSQQ DFR+DIIKGSLRAQRRKT+TWKLFQAN + +  
Sbjct: 642 DTYTNTKDTNNPAQTDEVALIRYSQQSDFRRDIIKGSLRAQRRKTVTWKLFQANVHSYLF 701

Query: 181 -------FFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 240
                  FFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE
Sbjct: 702 FDRLDKSFFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 761

Query: 241 KA---------------------------------------------------------- 288
           KA                                                          
Sbjct: 762 KARIEIAETWDSILFAQVIRGLLLVTQSILRKYIVLPSLIIAKNLIRMLLFQFPEWSEDF 821

BLAST of CmUC11G211810 vs. ExPASy Swiss-Prot
Match: Q2L951 (Protein TIC 214 OS=Gossypium hirsutum OX=3635 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 6.2e-64
Identity = 179/459 (39.00%), Postives = 217/459 (47.28%), Query Frame = 0

Query: 2   LNETSRKNDSENVWTNKIHAIFLNTNYLQIED---------------------------K 61
           +N+T +K +++  W NKIHA+ L T+Y  +E                             
Sbjct: 524 INQTYKKKNTDPFWINKIHALLLTTDYHDLEQTLDTLNIKSLATEKELSLLTLTEDEQGN 583

Query: 62  IESEDRIKSLNFLFDAIITPYNAKA--------SQISKKVPQWSSKLIDELEQMEGENEE 121
           I+SEDR+K L FLF+ +IT  N +          +ISKKVP+WS KLID+LEQ EGENEE
Sbjct: 584 IDSEDRVKILKFLFNIVITNPNNQTIRKKSIGIKEISKKVPRWSYKLIDDLEQQEGENEE 643

Query: 122 SMAEDHEIRSRKAKRVVIFTNNRETNDTYTNTKDTNNPAETDEVALIRYSQQLDFRQDII 181
           ++  +HEIRSRK+KRVVIFTNN+   DTYTNTKD N+P +TDEVALIRYSQQ DFR+DII
Sbjct: 644 NVTAEHEIRSRKSKRVVIFTNNQANADTYTNTKDANDPDQTDEVALIRYSQQSDFRRDII 703

Query: 182 KGSLRAQRRKTITWKLFQANTN--LF-------FFFSFDIPGLTKTLFRPWIWTNTELTI 241
           KGS+RAQRRKTITW+LFQAN +  LF        FFSFDI G  K + R WI  N E  I
Sbjct: 704 KGSMRAQRRKTITWELFQANVHSPLFLDRVDKPLFFSFDISGPLKRISRNWICKNKESKI 763

Query: 242 SDNREEKTSENQNKEADIRETQKREEK--------------------------------- 287
           SD  E+K    + K+   RE  KREEK                                 
Sbjct: 764 SDYTEKKI---EKKDEAKREKYKREEKMRIEIAEAWDSLLLAQVIRGSVLITQSILRKYI 823

BLAST of CmUC11G211810 vs. ExPASy Swiss-Prot
Match: A0ZZ93 (Protein TIC 214 OS=Gossypium barbadense OX=3634 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 4.4e-62
Identity = 175/457 (38.29%), Postives = 214/457 (46.83%), Query Frame = 0

Query: 2   LNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKI-------------------------E 61
           +N+T +K +++  W NKIHA+ L T+Y  +E  +                         +
Sbjct: 523 INQTYKKKNTDPSWINKIHALLLTTDYHDLEQTLDTLNIKSLATEKELSLLTLTEDEQGD 582

Query: 62  SEDRIKSLNFLFDAIITPYNAKA--------SQISKKVPQWSSKLIDELEQMEGENEESM 121
           SEDR+K L FLF+ +IT  N +          +ISKKVP+WS KLID+LEQ EGENEE++
Sbjct: 583 SEDRVKILKFLFNIVITNPNNQTIRKKSIGIKEISKKVPRWSYKLIDDLEQQEGENEENV 642

Query: 122 AEDHEIRSRKAKRVVIFTNNRETNDTYTNTKDTNNPAETDEVALIRYSQQLDFRQDIIKG 181
             +HEIRSRK+KRVVIFTNN+   DTYTNTKD  +P +TDEVALIRYSQQ DFR+DIIKG
Sbjct: 643 TAEHEIRSRKSKRVVIFTNNQANADTYTNTKDAIDPDQTDEVALIRYSQQSDFRRDIIKG 702

Query: 182 SLRAQRRKTITWKLFQAN---------TNLFFFFSFDIPGLTKTLFRPWIWTNTELTISD 241
           S+RAQRRKTITW+LFQAN          +   FFSFDI G  K + R WI  N E  ISD
Sbjct: 703 SMRAQRRKTITWELFQANVHSPLCLDRVDKPLFFSFDISGPLKRISRNWICKNKESKISD 762

Query: 242 NREEKTSENQNKEADIRETQKREEK----------------------------------- 287
             E+K    + K+   RE  KREEK                                   
Sbjct: 763 YTEKKI---EKKDEAKREKYKREEKMRIEIAEAWDSLLLAQVIRGSVLITQSILRKYIIL 822

BLAST of CmUC11G211810 vs. ExPASy Swiss-Prot
Match: Q14FA0 (Protein TIC 214 OS=Populus alba OX=43335 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.7e-58
Identity = 176/444 (39.64%), Postives = 213/444 (47.97%), Query Frame = 0

Query: 1   MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAIITPYNAK-- 60
           ++NE S KN  E +W NKI+ I L +NY + E K+  EDRI+ L FLFDAII     K  
Sbjct: 521 IINEISIKNYIEMLWINKIYLILLISNYQEFEPKM--EDRIRILKFLFDAIIVDSKNKKI 580

Query: 61  -------ASQISKKVPQWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTNNRET 120
                    +ISK++P+WS KLID+LEQ EGENEE+ AEDHEIRSRKAKRVVIFT+N+E 
Sbjct: 581 VKKSTEIKKEISKQIPRWSYKLIDDLEQQEGENEENAAEDHEIRSRKAKRVVIFTDNQEN 640

Query: 121 ND--TYTN--TKDTNNPAETDEVALIRYSQQLDFRQDIIKGSLRAQRRKTITWKLFQAN- 180
            D  TY N  TKDT N  +T EVALIRYSQQ DFR+DIIKGS+R QRRK    KLFQAN 
Sbjct: 641 PDSNTYNNSKTKDTTNFDQTGEVALIRYSQQSDFRRDIIKGSMRTQRRKIAILKLFQANL 700

Query: 181 --------TNLFFFFSFDIPGLTKTLFRPWIWTNTELTISDN--REEKTSENQNKEAD-- 240
                    + F FF+FD   L K +F  W+  N E TISD+   EEKT E+  KE +  
Sbjct: 701 HSPLFLDRIDKFLFFAFDTSELMKIMFINWMCKNAEFTISDSTYTEEKTKESDKKEKEEI 760

Query: 241 --IRETQKREEK------------------------------------------------ 288
              RE  KREEK                                                
Sbjct: 761 KNRREEDKREEKVRIEIAETWDSIIFAQAIRGCVLVIQSILRKYILLPSLIIAKNMIRML 820

BLAST of CmUC11G211810 vs. ExPASy Swiss-Prot
Match: A4GYX4 (Protein TIC 214 OS=Populus trichocarpa OX=3694 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 3.0e-58
Identity = 176/446 (39.46%), Postives = 213/446 (47.76%), Query Frame = 0

Query: 1   MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAIITPYNAK-- 60
           ++NE S KN  E +W NKI+ I L +NY + E K+  EDRI+ L FLFDAII     K  
Sbjct: 521 IINEISIKNYIEMLWINKIYLILLISNYQEFEPKM--EDRIRILKFLFDAIIVDSKNKKI 580

Query: 61  -------ASQISKKVPQWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTNNRET 120
                    +ISK++P+WS KLID+LEQ EGENEE+ AEDHEIRSRKAKRVVIFT+N+E 
Sbjct: 581 VKKSTEIKKEISKQIPRWSYKLIDDLEQQEGENEENAAEDHEIRSRKAKRVVIFTDNQEN 640

Query: 121 ND--TYTN--TKDTNNPAETDEVALIRYSQQLDFRQDIIKGSLRAQRRKTITWKLFQAN- 180
            D  TY N  TKDT N  +T EVALIRYSQQ DFR+DIIKGS+R QRRK    KLFQAN 
Sbjct: 641 PDSNTYNNSKTKDTTNFDQTGEVALIRYSQQSDFRRDIIKGSMRTQRRKIAILKLFQANL 700

Query: 181 --------TNLFFFFSFDIPGLTKTLFRPWIWTNTELTISDN----REEKTSENQNKEAD 240
                    + F FF+FD   L K +F  W+  N E TISD+     EEKT E+  KE +
Sbjct: 701 HSPLFLDRIDKFLFFAFDTSELMKIMFINWMCKNAEFTISDSTSTYTEEKTKESDKKEKE 760

Query: 241 ----IRETQKREEK---------------------------------------------- 288
                RE  KREEK                                              
Sbjct: 761 EIKNRREEDKREEKVRIEIAETWDSIIFAQAIRGCVLVIQSILRKYILLPSLIIAKNIIR 820

BLAST of CmUC11G211810 vs. ExPASy Swiss-Prot
Match: Q49KU0 (Protein TIC 214 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.2e-54
Identity = 168/460 (36.52%), Postives = 210/460 (45.65%), Query Frame = 0

Query: 1   MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIE------------------------ 60
           +LN+ S KN  E  W NKIH+I   T+  ++E+KI+                        
Sbjct: 522 ILNKMSIKNYIETGWINKIHSILFTTDQEKLEEKIDTFDKNSLSTEKKLSLFPFPETEQG 581

Query: 61  ---SEDRIKSLNFLFDAIITPYNAK--------ASQISKKVPQWSSKLIDELEQMEGENE 120
              SED+IK L   F+A+IT    K          +IS KVP WS KLI++LEQ EGENE
Sbjct: 582 RIHSEDQIKILKIFFNAVITEPKTKRIKKKSIGIKEISTKVPSWSYKLINDLEQQEGENE 641

Query: 121 ESMAEDHEIRSRKAKRVVIFTNNRETNDTYTNTKDTNNPAETDEVALIRYSQQLDFRQDI 180
           E +AEDHEIRSRK K V+IFT+N E  D   N+K+TNN  E DEV  IRYSQQ DFR+DI
Sbjct: 642 EMVAEDHEIRSRKTKHVLIFTDNDENTD--ANSKNTNNLDEADEVTFIRYSQQSDFRRDI 701

Query: 181 IKGSLRAQRRKTITWKLFQANTNLFFF--------FSFDIPGLTKTLFRPWIW-TNTELT 240
           IKGS+RAQRRKT+  +LFQAN +   F        FSFDI G+ K + + W++   TEL 
Sbjct: 702 IKGSMRAQRRKTVICELFQANVHSPLFLDRIGKPLFSFDISGMIKFILKKWMYKKTTELR 761

Query: 241 ISDNREEKTSENQ-NKEADIRETQKREEKA------------------------------ 287
           ISD  +EK  EN+  KE D RE  KR+EKA                              
Sbjct: 762 ISDYTQEKKKENEKKKEEDKREEYKRQEKARIEIAQTWDRVLFAQAIRGSLLVTQSFLRK 821

BLAST of CmUC11G211810 vs. ExPASy TrEMBL
Match: A0A249RX64 (Protein TIC 214 OS=Citrullus amarus OX=1567104 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.4e-127
Identity = 273/433 (63.05%), Postives = 283/433 (65.36%), Query Frame = 0

Query: 1   MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAIITPYNAKAS 60
           MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDA+ITPYNAKAS
Sbjct: 522 MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAVITPYNAKAS 581

Query: 61  --------QISKKVPQWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTNNRETN 120
                   +ISKKVP+WSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFT+NRET+
Sbjct: 582 RQNSIGIREISKKVPRWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTDNRETS 641

Query: 121 DTYTNTKDTNNPAETDEVALIRYSQQLDFRQDIIKGSLRAQRRKTITWKLFQANTNLF-- 180
           DTYTNTKDTNNPAETDEVALIRYSQQ DFR+DIIKGSLRAQRRKT+TWKLFQAN + +  
Sbjct: 642 DTYTNTKDTNNPAETDEVALIRYSQQSDFRRDIIKGSLRAQRRKTVTWKLFQANVHSYLF 701

Query: 181 -------FFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 240
                  FFFSFDIPGLTK LFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE
Sbjct: 702 FDRLDKSFFFSFDIPGLTKKLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 761

Query: 241 KA---------------------------------------------------------- 288
           KA                                                          
Sbjct: 762 KARIEIAETWDSILFAQVIRGLLLVTQSILRKYIVLPSLIIAKNLIRMLLFQFPEWSEDF 821

BLAST of CmUC11G211810 vs. ExPASy TrEMBL
Match: A0A1P8LDD3 (Ycf1 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ycf1 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.4e-127
Identity = 273/433 (63.05%), Postives = 283/433 (65.36%), Query Frame = 0

Query: 1   MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAIITPYNAKAS 60
           MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDA+ITPYNAKAS
Sbjct: 522 MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAVITPYNAKAS 581

Query: 61  --------QISKKVPQWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTNNRETN 120
                   +ISKKVP+WSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFT+NRET+
Sbjct: 582 RQNSIGIREISKKVPRWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTDNRETS 641

Query: 121 DTYTNTKDTNNPAETDEVALIRYSQQLDFRQDIIKGSLRAQRRKTITWKLFQANTNLF-- 180
           DTYTNTKDTNNPAETDEVALIRYSQQ DFR+DIIKGSLRAQRRKT+TWKLFQAN + +  
Sbjct: 642 DTYTNTKDTNNPAETDEVALIRYSQQSDFRRDIIKGSLRAQRRKTVTWKLFQANVHSYLF 701

Query: 181 -------FFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 240
                  FFFSFDIPGLTK LFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE
Sbjct: 702 FDRLDKSFFFSFDIPGLTKKLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 761

Query: 241 KA---------------------------------------------------------- 288
           KA                                                          
Sbjct: 762 KARIEIAETWDSILFAQVIRGLLLVTQSILRKYIVLPSLIIAKNLIRMLLFQFPEWSEDF 821

BLAST of CmUC11G211810 vs. ExPASy TrEMBL
Match: A0A1P8LDM6 (Ycf1 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ycf1 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.4e-127
Identity = 273/433 (63.05%), Postives = 283/433 (65.36%), Query Frame = 0

Query: 1   MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAIITPYNAKAS 60
           MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDA+ITPYNAKAS
Sbjct: 522 MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAVITPYNAKAS 581

Query: 61  --------QISKKVPQWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTNNRETN 120
                   +ISKKVP+WSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFT+NRET+
Sbjct: 582 RQNSIGIREISKKVPRWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTDNRETS 641

Query: 121 DTYTNTKDTNNPAETDEVALIRYSQQLDFRQDIIKGSLRAQRRKTITWKLFQANTNLF-- 180
           DTYTNTKDTNNPAETDEVALIRYSQQ DFR+DIIKGSLRAQRRKT+TWKLFQAN + +  
Sbjct: 642 DTYTNTKDTNNPAETDEVALIRYSQQSDFRRDIIKGSLRAQRRKTVTWKLFQANVHSYLF 701

Query: 181 -------FFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 240
                  FFFSFDIPGLTK LFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE
Sbjct: 702 FDRLDKSFFFSFDIPGLTKKLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 761

Query: 241 KA---------------------------------------------------------- 288
           KA                                                          
Sbjct: 762 KARIEIAETWDSILFAQVIRGLLLVTQSILRKYIVLPSLIIAKNLIRMLLFQFPEWSEDF 821

BLAST of CmUC11G211810 vs. ExPASy TrEMBL
Match: A0A249RXF8 (Protein TIC 214 OS=Citrullus rehmii OX=260675 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.4e-127
Identity = 272/433 (62.82%), Postives = 283/433 (65.36%), Query Frame = 0

Query: 1   MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAIITPYNAKAS 60
           MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDA+ITPYNAKAS
Sbjct: 522 MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAVITPYNAKAS 581

Query: 61  --------QISKKVPQWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTNNRETN 120
                   +I KKVP+WSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFT+NRET+
Sbjct: 582 RQNSIGIREIRKKVPRWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTDNRETS 641

Query: 121 DTYTNTKDTNNPAETDEVALIRYSQQLDFRQDIIKGSLRAQRRKTITWKLFQANTNLF-- 180
           DTYTNTKDTNNPA+TDEVALIRYSQQ DFR+DIIKGSLRAQRRKT+TWKLFQAN + +  
Sbjct: 642 DTYTNTKDTNNPAQTDEVALIRYSQQSDFRRDIIKGSLRAQRRKTVTWKLFQANVHSYLF 701

Query: 181 -------FFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 240
                  FFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE
Sbjct: 702 FDRLDKSFFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 761

Query: 241 KA---------------------------------------------------------- 288
           KA                                                          
Sbjct: 762 KARIEIAETWDSILFAQVIRGLLLVTQSILRKYIVLPSLIIAKNLIRMLLFQFPEWSEDF 821

BLAST of CmUC11G211810 vs. ExPASy TrEMBL
Match: A0A343F2F2 (Protein TIC 214 OS=Citrullus colocynthis OX=252529 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.4e-127
Identity = 272/433 (62.82%), Postives = 283/433 (65.36%), Query Frame = 0

Query: 1   MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAIITPYNAKAS 60
           MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDA+ITPYNAKAS
Sbjct: 1   MLNETSRKNDSENVWTNKIHAIFLNTNYLQIEDKIESEDRIKSLNFLFDAVITPYNAKAS 60

Query: 61  --------QISKKVPQWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTNNRETN 120
                   +I KKVP+WSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFT+NRET+
Sbjct: 61  RQNSIGIREIRKKVPRWSSKLIDELEQMEGENEESMAEDHEIRSRKAKRVVIFTDNRETS 120

Query: 121 DTYTNTKDTNNPAETDEVALIRYSQQLDFRQDIIKGSLRAQRRKTITWKLFQANTNLF-- 180
           DTYTNTKDTNNPA+TDEVALIRYSQQ DFR+DIIKGSLRAQRRKT+TWKLFQAN + +  
Sbjct: 121 DTYTNTKDTNNPAQTDEVALIRYSQQSDFRRDIIKGSLRAQRRKTVTWKLFQANVHSYLF 180

Query: 181 -------FFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 240
                  FFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE
Sbjct: 181 FDRLDKSFFFSFDIPGLTKTLFRPWIWTNTELTISDNREEKTSENQNKEADIRETQKREE 240

Query: 241 KA---------------------------------------------------------- 288
           KA                                                          
Sbjct: 241 KARIEIAETWDSILFAQVIRGLLLVTQSILRKYIVLPSLIIAKNLIRMLLFQFPEWSEDF 300

BLAST of CmUC11G211810 vs. TAIR 10
Match: ATCG01130.1 (Ycf1 protein )

HSP 1 Score: 198.0 bits (502), Expect = 1.1e-50
Identity = 150/449 (33.41%), Postives = 208/449 (46.33%), Query Frame = 0

Query: 1   MLNETSRKNDSENVWTNKIHAIFLNTNYL--------------------------QIEDK 60
           ++ ET RKN+    W NKIH + L  NY                           Q E+K
Sbjct: 505 IITETYRKNNLGGSWINKIHGLLLKINYKKFEQTIEKFNRKSLSIEKKLSFFSEPQQEEK 564

Query: 61  IESEDRIKSLNFLFDAIITPYNAKA--------SQISKKVPQWSSKLIDELEQMEGENEE 120
           I SE+ IK+  FLFD + T  N +          +I+KKVP+WS KLI ELE++EGENEE
Sbjct: 565 INSEEEIKTFKFLFDIVRTDSNDQTLIKNFMDFPEINKKVPRWSYKLISELEELEGENEE 624

Query: 121 SMAEDHEIRSRKAKRVVIFTNNRETNDTYTNTKDTNNPAETDEVALIRYSQQLDFRQDII 180
           ++  +  IRSRKAKRVV+FT+     + YTN KD  N  + DE+ALIRYSQQ DFR++II
Sbjct: 625 NVPMEPGIRSRKAKRVVVFTDKEPHGEIYTNLKDNQNSDQNDEMALIRYSQQSDFRREII 684

Query: 181 KGSLRAQRRKTITWKLFQANTN--LF-------FFFSFDIPGLTKTLFRPWIWTNTELTI 240
           KGS+R+QRRKT+ W+ FQA  +  LF       FFFSFDI GL K + + +IW       
Sbjct: 685 KGSMRSQRRKTVIWEFFQAKVHSPLFFDRIDKLFFFSFDIWGLKKKIIKNFIWKKK---- 744

Query: 241 SDNREEKTSENQ------------------------------------------------ 288
            D +EE+ S+ +                                                
Sbjct: 745 IDKKEEEQSKREETRRIEIAETWDSFLFAQIIRGSLLVTQSILRKYIILPLLIIIKNSVR 804

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
QZL38742.12.9e-12763.05Ycf1 protein [Citrullus ecirrhosus][more]
YP_009431615.12.9e-12763.05Ycf1 [Citrullus amarus] >APW82521.1 Ycf1 [Citrullus lanatus subsp. vulgaris] >AS... [more]
APW82606.12.9e-12763.05Ycf1 [Citrullus lanatus subsp. vulgaris][more]
YP_009420853.14.9e-12762.82Ycf1 [Citrullus colocynthis] >ASP44532.1 Ycf1 [Citrullus colocynthis][more]
YP_009431701.14.9e-12762.82Ycf1 [Citrullus rehmii] >ASY96312.1 Ycf1 [Citrullus rehmii][more]
Match NameE-valueIdentityDescription
Q2L9516.2e-6439.00Protein TIC 214 OS=Gossypium hirsutum OX=3635 GN=TIC214 PE=3 SV=1[more]
A0ZZ934.4e-6238.29Protein TIC 214 OS=Gossypium barbadense OX=3634 GN=TIC214 PE=3 SV=1[more]
Q14FA01.7e-5839.64Protein TIC 214 OS=Populus alba OX=43335 GN=TIC214 PE=3 SV=1[more]
A4GYX43.0e-5839.46Protein TIC 214 OS=Populus trichocarpa OX=3694 GN=TIC214 PE=3 SV=1[more]
Q49KU01.2e-5436.52Protein TIC 214 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=TIC214 PE=3 S... [more]
Match NameE-valueIdentityDescription
A0A249RX641.4e-12763.05Protein TIC 214 OS=Citrullus amarus OX=1567104 GN=ycf1 PE=3 SV=1[more]
A0A1P8LDD31.4e-12763.05Ycf1 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ycf1 PE=4 SV=1[more]
A0A1P8LDM61.4e-12763.05Ycf1 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ycf1 PE=4 SV=1[more]
A0A249RXF82.4e-12762.82Protein TIC 214 OS=Citrullus rehmii OX=260675 GN=ycf1 PE=3 SV=1[more]
A0A343F2F22.4e-12762.82Protein TIC 214 OS=Citrullus colocynthis OX=252529 GN=ycf1 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
ATCG01130.11.1e-5033.41Ycf1 protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 201..221
NoneNo IPR availableCOILSCoilCoilcoord: 70..90
NoneNo IPR availablePANTHERPTHR33163:SF13PROTEIN TIC 214-RELATEDcoord: 3..222
NoneNo IPR availablePANTHERPTHR33163:SF13PROTEIN TIC 214-RELATEDcoord: 224..286
IPR008896Protein TIC214PFAMPF05758Ycf1coord: 32..225
e-value: 2.2E-64
score: 217.8
IPR008896Protein TIC214PANTHERPTHR33163PROTEIN TIC 214-RELATEDcoord: 224..286
IPR008896Protein TIC214PANTHERPTHR33163PROTEIN TIC 214-RELATEDcoord: 3..222

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC11G211810.1CmUC11G211810.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009536 plastid