CmUC11G211690 (gene) Watermelon (USVL531) v1

Overview
NameCmUC11G211690
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr11: 7964795 .. 7965100 (-)
RNA-Seq ExpressionCmUC11G211690
SyntenyCmUC11G211690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCAAGATGTAGAGCAAGAGGCCTTGTGAAGGGCATGTTGGGTCCTCTCCATGGGGAAGCTATGGCTGGCAGTAGAAAGACGACGACAAGCACGTCAAATGCTTCGTCGTGTTCGAGTCATGTTTCGTTTATGGTTCATCACCAAGAAAGAGCGGTTCATGATCAAACCATGAATAATGTTCACGAGGCGAACTTTTGGAACCTTTACGGCGTCGTTGTGGATGAACATATCGATTGGAAGGCCACCATGTACATATCATCAGTGCAAGAACGCTTTAAACTTGAGGGCTTAAGCAATTGA

mRNA sequence

ATGGATTCAAGATGTAGAGCAAGAGGCCTTGTGAAGGGCATGTTGGGTCCTCTCCATGGGGAAGCTATGGCTGGCAGTAGAAAGACGACGACAAGCACGTCAAATGCTTCGTCGTGTTCGAGTCATGTTTCGTTTATGGTTCATCACCAAGAAAGAGCGGTTCATGATCAAACCATGAATAATGTTCACGAGGCGAACTTTTGGAACCTTTACGGCGTCGTTGTGGATGAACATATCGATTGGAAGGCCACCATGTACATATCATCAGTGCAAGAACGCTTTAAACTTGAGGGCTTAAGCAATTGA

Coding sequence (CDS)

ATGGATTCAAGATGTAGAGCAAGAGGCCTTGTGAAGGGCATGTTGGGTCCTCTCCATGGGGAAGCTATGGCTGGCAGTAGAAAGACGACGACAAGCACGTCAAATGCTTCGTCGTGTTCGAGTCATGTTTCGTTTATGGTTCATCACCAAGAAAGAGCGGTTCATGATCAAACCATGAATAATGTTCACGAGGCGAACTTTTGGAACCTTTACGGCGTCGTTGTGGATGAACATATCGATTGGAAGGCCACCATGTACATATCATCAGTGCAAGAACGCTTTAAACTTGAGGGCTTAAGCAATTGA

Protein sequence

MDSRCRARGLVKGMLGPLHGEAMAGSRKTTTSTSNASSCSSHVSFMVHHQERAVHDQTMNNVHEANFWNLYGVVVDEHIDWKATMYISSVQERFKLEGLSN
Homology
BLAST of CmUC11G211690 vs. NCBI nr
Match: KAA0056544.1 (hypothetical protein E6C27_scaffold288G00460 [Cucumis melo var. makuwa] >TYK02718.1 hypothetical protein E5676_scaffold1154G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 162.9 bits (411), Expect = 1.4e-36
Identity = 83/111 (74.77%), Postives = 87/111 (78.38%), Query Frame = 0

Query: 1   MDSRCRARGLVKGMLGPLHGEAMAGSRKTTTSTSNASSCSSHVSFMVHHQERA------- 60
           MDSRCRARGLVKGM+GPLHGEAM GSRK   +TSNAS CSSH+SF VHHQER        
Sbjct: 1   MDSRCRARGLVKGMVGPLHGEAMTGSRKMAPTTSNASLCSSHISFTVHHQERVMMAPSNR 60

Query: 61  ---VHDQTMNNVHEANFWNLYGVVVDEHIDWKATMYISSVQERFKLEGLSN 102
              VHDQ MNNVHEA  WNLYGV VDEHID KA +YISSVQERFKLEGL N
Sbjct: 61  RVLVHDQAMNNVHEATLWNLYGVGVDEHIDRKAALYISSVQERFKLEGLIN 111

BLAST of CmUC11G211690 vs. NCBI nr
Match: KAE8652260.1 (hypothetical protein Csa_022307 [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 2.1e-32
Identity = 79/105 (75.24%), Postives = 84/105 (80.00%), Query Frame = 0

Query: 7   ARGLVKGMLGPLHGEAMAGSR-KTTTSTSNASSCSSHVSFMVHHQERA---------VHD 66
           ARGLVKGM+GPLHGEAM GSR K T +TSNAS CSSH+SF VHHQERA         VHD
Sbjct: 122 ARGLVKGMVGPLHGEAMTGSRSKITPTTSNASLCSSHISFTVHHQERALMAPSNHRVVHD 181

Query: 67  QTMNNVHEANFWNLYGVVVDEHIDWKATMYISSVQERFKLEGLSN 102
           Q MNNVHEA  WNLYGV VDEHID KA++YISSVQERFKLEGL N
Sbjct: 182 QAMNNVHEATLWNLYGVGVDEHIDRKASLYISSVQERFKLEGLIN 226

BLAST of CmUC11G211690 vs. NCBI nr
Match: KAG6578363.1 (hypothetical protein SDJN03_22811, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 125.2 bits (313), Expect = 3.3e-25
Identity = 73/112 (65.18%), Postives = 75/112 (66.96%), Query Frame = 0

Query: 1   MDSRCRARGLVKGMLGPLHGEAMAGSRKTTTSTSNASSCSSHVSFMVHHQERA------- 60
           MD+RCRARGLVKGMLGPLHGE MA             SCSSHVSFMVH QERA       
Sbjct: 1   MDARCRARGLVKGMLGPLHGEGMA-------------SCSSHVSFMVHRQERAAMPPSNQ 60

Query: 61  --VHDQTMNNVHEANFWNLY--GVVVDEHIDWKATMYISSVQERFKLEGLSN 102
             VHDQ MNNV EANF N    G   DEHID KA MYISSVQERF+LEGL N
Sbjct: 61  RVVHDQAMNNVQEANFRNPQGGGGFADEHIDRKAAMYISSVQERFRLEGLIN 99

BLAST of CmUC11G211690 vs. NCBI nr
Match: KAG6602687.1 (hypothetical protein SDJN03_07920, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117.9 bits (294), Expect = 5.2e-23
Identity = 73/110 (66.36%), Postives = 76/110 (69.09%), Query Frame = 0

Query: 1   MDSRCR-ARGLVKGMLGPLHGEAMAGSRKT--TTSTSNASSCSSHVSFMVHHQERA---- 60
           MDSRCR AR LV       HGEAMA SR T  T +  NASSCS HVSFMVHHQERA    
Sbjct: 1   MDSRCRSARPLVP------HGEAMASSRNTKPTATLLNASSCSCHVSFMVHHQERAKMAS 60

Query: 61  -----VHDQTMNNVHEANFWNLYGVVVDEHIDWKATMYISSVQERFKLEG 99
                VH+    NVHEA FWN YGVVVDEHID KA MYISSVQERF+LEG
Sbjct: 61  SNQRVVHEAM--NVHEAKFWNGYGVVVDEHIDRKAAMYISSVQERFRLEG 102

BLAST of CmUC11G211690 vs. NCBI nr
Match: PON95398.1 (hypothetical protein TorRG33x02_089200 [Trema orientale])

HSP 1 Score: 60.1 bits (144), Expect = 1.3e-05
Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = 0

Query: 1   MDSRCRARGLVKGMLGPLHGEAMAGSRKTTTST--------SNASSCSSHVSFMVHHQ-- 60
           M+S  + RG +KG L P +  A   S  TTT+         S +S  ++ V F+VH    
Sbjct: 1   MESNRKRRGFMKGKLMPFYRAAKPNSSTTTTTVQYTSKVKPSQSSPSAASVGFLVHQDYV 60

Query: 61  --------ERAVHDQTMNNVHEANFWNLYGVVVDEHIDWKATMYISSVQERFKLEGLSN 102
                      +  ++ ++V + +  NLYGV VDE +D KA  YISSVQERFKLE +++
Sbjct: 61  IAQPKPKISFILPPESRDSVVQLD--NLYGVAVDESVDSKAASYISSVQERFKLERVNS 117

BLAST of CmUC11G211690 vs. ExPASy TrEMBL
Match: A0A5A7UMY1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00160 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 6.8e-37
Identity = 83/111 (74.77%), Postives = 87/111 (78.38%), Query Frame = 0

Query: 1   MDSRCRARGLVKGMLGPLHGEAMAGSRKTTTSTSNASSCSSHVSFMVHHQERA------- 60
           MDSRCRARGLVKGM+GPLHGEAM GSRK   +TSNAS CSSH+SF VHHQER        
Sbjct: 1   MDSRCRARGLVKGMVGPLHGEAMTGSRKMAPTTSNASLCSSHISFTVHHQERVMMAPSNR 60

Query: 61  ---VHDQTMNNVHEANFWNLYGVVVDEHIDWKATMYISSVQERFKLEGLSN 102
              VHDQ MNNVHEA  WNLYGV VDEHID KA +YISSVQERFKLEGL N
Sbjct: 61  RVLVHDQAMNNVHEATLWNLYGVGVDEHIDRKAALYISSVQERFKLEGLIN 111

BLAST of CmUC11G211690 vs. ExPASy TrEMBL
Match: A0A0A0LQT5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406070 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 8.9e-37
Identity = 85/111 (76.58%), Postives = 90/111 (81.08%), Query Frame = 0

Query: 1   MDSRCRARGLVKGMLGPLHGEAMAGSR-KTTTSTSNASSCSSHVSFMVHHQERA------ 60
           MDSRCRARGLVKGM+GPLHGEAM GSR K T +TSNAS CSSH+SF VHHQERA      
Sbjct: 1   MDSRCRARGLVKGMVGPLHGEAMTGSRSKITPTTSNASLCSSHISFTVHHQERALMAPSN 60

Query: 61  ---VHDQTMNNVHEANFWNLYGVVVDEHIDWKATMYISSVQERFKLEGLSN 102
              VHDQ MNNVHEA  WNLYGV VDEHID KA++YISSVQERFKLEGL N
Sbjct: 61  HRVVHDQAMNNVHEATLWNLYGVGVDEHIDRKASLYISSVQERFKLEGLIN 111

BLAST of CmUC11G211690 vs. ExPASy TrEMBL
Match: A0A2P5FC89 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_089200 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.3e-06
Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = 0

Query: 1   MDSRCRARGLVKGMLGPLHGEAMAGSRKTTTST--------SNASSCSSHVSFMVHHQ-- 60
           M+S  + RG +KG L P +  A   S  TTT+         S +S  ++ V F+VH    
Sbjct: 1   MESNRKRRGFMKGKLMPFYRAAKPNSSTTTTTVQYTSKVKPSQSSPSAASVGFLVHQDYV 60

Query: 61  --------ERAVHDQTMNNVHEANFWNLYGVVVDEHIDWKATMYISSVQERFKLEGLSN 102
                      +  ++ ++V + +  NLYGV VDE +D KA  YISSVQERFKLE +++
Sbjct: 61  IAQPKPKISFILPPESRDSVVQLD--NLYGVAVDESVDSKAASYISSVQERFKLERVNS 117

BLAST of CmUC11G211690 vs. ExPASy TrEMBL
Match: A0A2P5W1Z7 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A07G248400v1 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.4e-05
Identity = 44/112 (39.29%), Postives = 61/112 (54.46%), Query Frame = 0

Query: 1   MDSRCRARGLVKGMLGPLHG--EAMAGSRKTTTSTSN-ASSCSSHVSFMVHH-----QER 60
           MDS  + RG +KG L PL+   +  AG + T  +  N  SS ++ V F VH      Q +
Sbjct: 1   MDSNRKGRGFIKGKLAPLYRAVKPTAGVQCTNKAKPNQGSSTTASVGFRVHRDYMISQPK 60

Query: 61  AVH-----DQTMNNVHEANFWNLYGVVVDEHIDWKATMYISSVQERFKLEGL 100
            +      D+   N+ + +  N +GVV DE +D KA  YISSV+ERFKLE L
Sbjct: 61  KISFVVPADKNRENLSQID--NFFGVVGDESVDIKAATYISSVRERFKLEKL 110

BLAST of CmUC11G211690 vs. ExPASy TrEMBL
Match: A0A5D2Q0G2 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A07G266700v1 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.4e-05
Identity = 44/112 (39.29%), Postives = 61/112 (54.46%), Query Frame = 0

Query: 1   MDSRCRARGLVKGMLGPLHG--EAMAGSRKTTTSTSN-ASSCSSHVSFMVHH-----QER 60
           MDS  + RG +KG L PL+   +  AG + T  +  N  SS ++ V F VH      Q +
Sbjct: 1   MDSNRKGRGFIKGKLAPLYRAVKPTAGVQCTNKAKPNQGSSTTASVGFRVHRDYMISQPK 60

Query: 61  AVH-----DQTMNNVHEANFWNLYGVVVDEHIDWKATMYISSVQERFKLEGL 100
            +      D+   N+ + +  N +GVV DE +D KA  YISSV+ERFKLE L
Sbjct: 61  KISFVVPADKNRENLSQID--NFFGVVGDESVDIKAATYISSVRERFKLEKL 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0056544.11.4e-3674.77hypothetical protein E6C27_scaffold288G00460 [Cucumis melo var. makuwa] >TYK0271... [more]
KAE8652260.12.1e-3275.24hypothetical protein Csa_022307 [Cucumis sativus][more]
KAG6578363.13.3e-2565.18hypothetical protein SDJN03_22811, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6602687.15.2e-2366.36hypothetical protein SDJN03_07920, partial [Cucurbita argyrosperma subsp. sorori... [more]
PON95398.11.3e-0536.13hypothetical protein TorRG33x02_089200 [Trema orientale][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UMY16.8e-3774.77Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LQT58.9e-3776.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406070 PE=4 SV=1[more]
A0A2P5FC896.3e-0636.13Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_089200 PE=4 SV... [more]
A0A2P5W1Z72.4e-0539.29Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A07G248400v1 PE... [more]
A0A5D2Q0G22.4e-0539.29Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A07G266700v1 P... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..37
NoneNo IPR availablePANTHERPTHR36030FAMILY NOT NAMEDcoord: 1..99
NoneNo IPR availablePANTHERPTHR36030:SF1SUBFAMILY NOT NAMEDcoord: 1..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC11G211690.1CmUC11G211690.1mRNA