CmUC11G211640 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC11G211640
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Protein of unknown function (DUF 3339)
Location	CmU531Chr11: 7953619 .. 7954012 (-)
RNA-Seq Expression	CmUC11G211640
Synteny	CmUC11G211640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGACGTGTCAGGATGTGGGGTTGGTTTGTAGGGAAATTCTTATTCTTCCACCAATGCCGAAAAGACTTTATTTAGGGGAATATATATATATATATATATATATATATAAATAAAGTGTGTTTTAGTGGGAAGAGTAGTTAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAATATGAATGATTTGGCAGCTCCATTGATAGCATCAATATTGTTTGCGTTTCTATCACCAGGGATGATAATTCAGATGCCGGGAACAGAACGACCACTTGAGTTCATGAACTTGAAGACCAGTTTTGCTTCTATTTTTGTTCATGCTGTTGTGTTTCTTCTCCTTCTTATTTTGTTCCTTGTCATGCTCAACCTCCATATTTACATCTAA

mRNA sequence

ATGTGGGACTTAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAATATGAATGATTTGGCAGCTCCATTGATAGCATCAATATTGTTTGCGTTTCTATCACCAGGGATGATAATTCAGATGCCGGGAACAGAACGACCACTTGAGTTCATGAACTTGAAGACCAGTTTTGCTTCTATTTTTGTTCATGCTGTTGTGTTTCTTCTCCTTCTTATTTTGTTCCTTGTCATGCTCAACCTCCATATTTACATCTAA

Coding sequence (CDS)

ATGTGGGACTTAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAATATGAATGATTTGGCAGCTCCATTGATAGCATCAATATTGTTTGCGTTTCTATCACCAGGGATGATAATTCAGATGCCGGGAACAGAACGACCACTTGAGTTCATGAACTTGAAGACCAGTTTTGCTTCTATTTTTGTTCATGCTGTTGTGTTTCTTCTCCTTCTTATTTTGTTCCTTGTCATGCTCAACCTCCATATTTACATCTAA

Protein sequence

MWDLEEKRREEKRREEKNMNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLVMLNLHIYI

Homology

[Close]

BLAST of CmUC11G211640 vs. NCBI nr
Match: XP_038884725.1 (uncharacterized protein LOC120075417 [Benincasa hispida])

HSP 1 Score: 119.4 bits (298), Expect = 1.5e-23
Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 19 MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 78
          MNDLA PLIASILFAFLSPGMIIQMPG+ERPLEFMNLKTSFASIFVHAVVFLLLLILFLV
Sbjct: 1  MNDLAGPLIASILFAFLSPGMIIQMPGSERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 60

Query: 79 MLNLHIYI 87
          MLNLHIYI
Sbjct: 61 MLNLHIYI 68

[Close]

BLAST of CmUC11G211640 vs. NCBI nr
Match: XP_022939394.1 (uncharacterized protein LOC111445325 [Cucurbita moschata] >XP_022992845.1 uncharacterized protein LOC111489054 [Cucurbita maxima] >XP_023550675.1 uncharacterized protein LOC111808750 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 118.2 bits (295), Expect = 3.4e-23
Identity = 65/68 (95.59%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 19 MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 78
          MNDLAAPLIAS+LFAFLSPGMIIQMPG+ERPLEFMNLKTSFASIFVHAVVFLLLLIL LV
Sbjct: 1  MNDLAAPLIASVLFAFLSPGMIIQMPGSERPLEFMNLKTSFASIFVHAVVFLLLLILLLV 60

Query: 79 MLNLHIYI 87
          MLNLHIYI
Sbjct: 61 MLNLHIYI 68

[Close]

BLAST of CmUC11G211640 vs. NCBI nr
Match: XP_022134306.1 (uncharacterized protein LOC111006601 [Momordica charantia])

HSP 1 Score: 117.1 bits (292), Expect = 7.6e-23
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 19 MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 78
          M DLAAPLIAS+LFAFLSPGMIIQMPG+ERPLEFMNLKTSFASIFVHAVVFLLLLILFLV
Sbjct: 1  MTDLAAPLIASVLFAFLSPGMIIQMPGSERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 60

Query: 79 MLNLHIYI 87
          MLN+HIYI
Sbjct: 61 MLNVHIYI 68

[Close]

BLAST of CmUC11G211640 vs. NCBI nr
Match: XP_004138622.1 (uncharacterized protein LOC101212134 [Cucumis sativus] >XP_008441324.1 PREDICTED: uncharacterized protein LOC103485473 [Cucumis melo])

HSP 1 Score: 116.7 bits (291), Expect = 9.9e-23
Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 19 MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 78
          MNDLA PLIASILFAFLSPGMIIQMPG+E+PLEFMN KTSFASIFVHAVVFLLLLILFLV
Sbjct: 1  MNDLAGPLIASILFAFLSPGMIIQMPGSEKPLEFMNFKTSFASIFVHAVVFLLLLILFLV 60

Query: 79 MLNLHIYI 87
          MLNLHIYI
Sbjct: 61 MLNLHIYI 68

[Close]

BLAST of CmUC11G211640 vs. NCBI nr
Match: XP_030450499.1 (uncharacterized protein LOC115672723 [Syzygium oleosum])

HSP 1 Score: 97.1 bits (240), Expect = 8.1e-17
Identity = 49/68 (72.06%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 19 MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 78
          MND AAPLIAS LFAFLSPGM++QMPG ERP++F+N+KT+ ASIFVHAV++ LLLILF V
Sbjct: 1  MNDWAAPLIASALFAFLSPGMVVQMPGKERPVDFLNMKTNLASIFVHAVLYGLLLILFFV 60

Query: 79 MLNLHIYI 87
          +LN+H+Y+
Sbjct: 61 VLNIHLYV 68

[Close]

BLAST of CmUC11G211640 vs. ExPASy TrEMBL
Match: A0A6J1JWU6 (uncharacterized protein LOC111489054 OS=Cucurbita maxima OX=3661 GN=LOC111489054 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23
Identity = 65/68 (95.59%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 19 MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 78
          MNDLAAPLIAS+LFAFLSPGMIIQMPG+ERPLEFMNLKTSFASIFVHAVVFLLLLIL LV
Sbjct: 1  MNDLAAPLIASVLFAFLSPGMIIQMPGSERPLEFMNLKTSFASIFVHAVVFLLLLILLLV 60

Query: 79 MLNLHIYI 87
          MLNLHIYI
Sbjct: 61 MLNLHIYI 68

[Close]

BLAST of CmUC11G211640 vs. ExPASy TrEMBL
Match: A0A6J1FH14 (uncharacterized protein LOC111445325 OS=Cucurbita moschata OX=3662 GN=LOC111445325 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23
Identity = 65/68 (95.59%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 19 MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 78
          MNDLAAPLIAS+LFAFLSPGMIIQMPG+ERPLEFMNLKTSFASIFVHAVVFLLLLIL LV
Sbjct: 1  MNDLAAPLIASVLFAFLSPGMIIQMPGSERPLEFMNLKTSFASIFVHAVVFLLLLILLLV 60

Query: 79 MLNLHIYI 87
          MLNLHIYI
Sbjct: 61 MLNLHIYI 68

[Close]

BLAST of CmUC11G211640 vs. ExPASy TrEMBL
Match: A0A6J1BXI1 (uncharacterized protein LOC111006601 OS=Momordica charantia OX=3673 GN=LOC111006601 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.7e-23
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 19 MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 78
          M DLAAPLIAS+LFAFLSPGMIIQMPG+ERPLEFMNLKTSFASIFVHAVVFLLLLILFLV
Sbjct: 1  MTDLAAPLIASVLFAFLSPGMIIQMPGSERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 60

Query: 79 MLNLHIYI 87
          MLN+HIYI
Sbjct: 61 MLNVHIYI 68

[Close]

BLAST of CmUC11G211640 vs. ExPASy TrEMBL
Match: A0A1S3B2Q0 (uncharacterized protein LOC103485473 OS=Cucumis melo OX=3656 GN=LOC103485473 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.8e-23
Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 19 MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 78
          MNDLA PLIASILFAFLSPGMIIQMPG+E+PLEFMN KTSFASIFVHAVVFLLLLILFLV
Sbjct: 1  MNDLAGPLIASILFAFLSPGMIIQMPGSEKPLEFMNFKTSFASIFVHAVVFLLLLILFLV 60

Query: 79 MLNLHIYI 87
          MLNLHIYI
Sbjct: 61 MLNLHIYI 68

[Close]

BLAST of CmUC11G211640 vs. ExPASy TrEMBL
Match: A0A059APB1 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I01639 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.4e-16
Identity = 47/68 (69.12%), Postives = 60/68 (88.24%), Query Frame = 0


Query: 19 MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 78
          MND AAPLIAS LFAFLSPGM++QMPG  +P++F+N+KTS  SIFVHAV++ LLLILF V
Sbjct: 1  MNDWAAPLIASALFAFLSPGMVVQMPGKSQPVDFLNMKTSLPSIFVHAVLYGLLLILFFV 60

Query: 79 MLNLHIYI 87
          +LN+H+Y+
Sbjct: 61 VLNIHLYV 68

[Close]

BLAST of CmUC11G211640 vs. TAIR 10
Match: AT5G40960.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 87.0 bits (214), Expect = 7.8e-18
Identity = 46/67 (68.66%), Postives = 57/67 (85.07%), Query Frame = 0


Query: 19 MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 78
          M+D AAPLIAS LFAFLSPG+I+Q PG E P+ FMN+KT+ ASIFVH V++ L LILFLV
Sbjct: 1  MHDWAAPLIASALFAFLSPGLILQFPGKESPVGFMNMKTTVASIFVHTVLYGLFLILFLV 60

Query: 79 MLNLHIY 86
          +LN+H+Y
Sbjct: 61 VLNVHVY 67

[Close]

BLAST of CmUC11G211640 vs. TAIR 10
Match: AT5G63500.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 58.9 bits (141), Expect = 2.3e-09
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 0


Query: 19 MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 78
          M D    LIA ILF  LSPG++ Q+P   R +EF N++TS ASI VHA++F  L+ +F +
Sbjct: 1  MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60

Query: 79 MLNLHIY 86
           +N+HIY
Sbjct: 61 AINVHIY 67

[Close]

BLAST of CmUC11G211640 vs. TAIR 10
Match: AT5G08391.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 55.1 bits (131), Expect = 3.3e-08
Identity = 28/68 (41.18%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 19 MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 78
          M+D    L+  ILF  L+PG++ Q+PG ++ +EF N +TS  S+ VH++++  L+ +FL+
Sbjct: 1  MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60

Query: 79 MLNLHIYI 87
           L +HIYI
Sbjct: 61 ALKIHIYI 68

[Close]

BLAST of CmUC11G211640 vs. TAIR 10
Match: AT3G48660.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 54.3 bits (129), Expect = 5.6e-08
Identity = 29/67 (43.28%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 19 MNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFLV 78
          M D    ++A ILF  L+PG++ Q+P   R +EF N++TS ASI VH ++F  L+ +F +
Sbjct: 1  MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query: 79 MLNLHIY 86
           + LHIY
Sbjct: 61 AIRLHIY 67

[Close]

BLAST of CmUC11G211640 vs. TAIR 10
Match: AT3G27030.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G40970.1); Has 538 Blast hits to 271 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 534; Viruses - 4; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 2.1e-07
Identity = 27/68 (39.71%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 18  NMNDLAAPLIASILFAFLSPGMIIQMPGTERPLEFMNLKTSFASIFVHAVVFLLLLILFL 77
           +M D A  L+  +LF  LSPG++  +PG  R ++F  LKT+  +I VH ++F  +  + +
Sbjct: 73  SMADWAPVLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVHTLIFFAIYTILI 132

Query: 78  VMLNLHIY 86
           + LNLHIY
Sbjct: 133 LALNLHIY 140

The following BLAST results are available for this feature:

BLAST of CmUC11G211640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884725.1	1.5e-23	97.06	uncharacterized protein LOC120075417 [Benincasa hispida]	[more]
XP_022939394.1	3.4e-23	95.59	uncharacterized protein LOC111445325 [Cucurbita moschata] >XP_022992845.1 unchar...	[more]
XP_022134306.1	7.6e-23	94.12	uncharacterized protein LOC111006601 [Momordica charantia]	[more]
XP_004138622.1	9.9e-23	94.12	uncharacterized protein LOC101212134 [Cucumis sativus] >XP_008441324.1 PREDICTED...	[more]
XP_030450499.1	8.1e-17	72.06	uncharacterized protein LOC115672723 [Syzygium oleosum]	[more]

BLAST of CmUC11G211640 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC11G211640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JWU6	1.6e-23	95.59	uncharacterized protein LOC111489054 OS=Cucurbita maxima OX=3661 GN=LOC111489054...	[more]
A0A6J1FH14	1.6e-23	95.59	uncharacterized protein LOC111445325 OS=Cucurbita moschata OX=3662 GN=LOC1114453...	[more]
A0A6J1BXI1	3.7e-23	94.12	uncharacterized protein LOC111006601 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A1S3B2Q0	4.8e-23	94.12	uncharacterized protein LOC103485473 OS=Cucumis melo OX=3656 GN=LOC103485473 PE=...	[more]
A0A059APB1	7.4e-16	69.12	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I01639 PE=4 SV...	[more]

BLAST of CmUC11G211640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40960.1	7.8e-18	68.66	Protein of unknown function (DUF 3339)	[more]
AT5G63500.1	2.3e-09	49.25	Protein of unknown function (DUF 3339)	[more]
AT5G08391.1	3.3e-08	41.18	Protein of unknown function (DUF 3339)	[more]
AT3G48660.1	5.6e-08	43.28	Protein of unknown function (DUF 3339)	[more]
AT3G27030.1	2.1e-07	39.71	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021775	Protein of unknown function DUF3339	PFAM	PF11820	DUF3339	coord: 19..85 e-value: 2.7E-26 score: 91.5
IPR021775	Protein of unknown function DUF3339	PANTHER	PTHR33128	OS05G0103400 PROTEIN	coord: 19..86
None	No IPR available	PANTHER	PTHR33128:SF54	OS01G0849500 PROTEIN	coord: 19..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC11G211640.1	CmUC11G211640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane