CmUC11G211250 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC11G211250
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic
Location	CmU531Chr11: 7725376 .. 7726029 (-)
RNA-Seq Expression	CmUC11G211250
Synteny	CmUC11G211250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTCCATCGAGTTTCCCTTACTTGATCGAACAACCCAAACTTCAGTTATTTCAACTACATCAAATGATCTTTCAAATTGGTCAAGACTCTCCAGTTTATGGCCACTTCTCTATGGTACCAATTGTTGCTTCATTGAATTCGCTTCATTAATAGGTTCACGATTCGACTTTGATCGTTATGGACTGGTACCAAGATCTAGTCCTAGACAGGCAAACTTAATTTTAACAGCGGGTACGGTAACAATGAAAATGGCTCCTTCTTTAGTAAGATTATATGAGCAAATGCCTGAACCAAAATATGTTATTGCTATGGGAGCATGTACAATTACAGGAGGGATGTTCAGTACCGATTCTTATAGTACTGTTCGGGGAGTCGATAAGTTAATTCCTGTCGATGTGTATTTGCCGGGTTGCCATGACCCCGCGTATAAGGAGAGGTCGAATTCCAAACTTTTCTCTCGAGTATACCCATTACCAAAAAATGGACGTCACTTTGGGACACATGCGGATAGCCGCCCTTTCGAAAGGGCTAAAAGTCAGCCAAAAGAGCTAAAACTCTTTTTTTTGAGTTCCCTCCCATTTCTGTACCGGTTCCGGAAGAGCGAAGAAAAAGGGGATGTTTTGTTAATAGGAACAAGAAAGTGTTTATAG

mRNA sequence

ATGAATTCCATCGAGTTTCCCTTACTTGATCGAACAACCCAAACTTCAGTTATTTCAACTACATCAAATGATCTTTCAAATTGGTCAAGACTCTCCAGTTTATGGCCACTTCTCTATGGTACCAATTGTTGCTTCATTGAATTCGCTTCATTAATAGGTTCACGATTCGACTTTGATCGTTATGGACTGGTACCAAGATCTAGTCCTAGACAGGCAAACTTAATTTTAACAGCGGGTACGGTAACAATGAAAATGGCTCCTTCTTTAGTAAGATTATATGAGCAAATGCCTGAACCAAAATATGTTATTGCTATGGGAGCATGTACAATTACAGGAGGGATGTTCAGTACCGATTCTTATAGTACTGTTCGGGGAGTCGATAAGTTAATTCCTGTCGATGTGTATTTGCCGGGTTGCCATGACCCCGCGTATAAGGAGAGGTCGAATTCCAAACTTTTCTCTCGAGTATACCCATTACCAAAAAATGGACGTCACTTTGGGACACATGCGGATAGCCGCCCTTTCGAAAGGGCTAAAAGTCAGCCAAAAGAGCTAAAACTCTTTTTTTTGAGTTCCCTCCCATTTCTGTACCGGTTCCGGAAGAGCGAAGAAAAAGGGGATGTTTTGTTAATAGGAACAAGAAAGTGTTTATAG

Coding sequence (CDS)

ATGAATTCCATCGAGTTTCCCTTACTTGATCGAACAACCCAAACTTCAGTTATTTCAACTACATCAAATGATCTTTCAAATTGGTCAAGACTCTCCAGTTTATGGCCACTTCTCTATGGTACCAATTGTTGCTTCATTGAATTCGCTTCATTAATAGGTTCACGATTCGACTTTGATCGTTATGGACTGGTACCAAGATCTAGTCCTAGACAGGCAAACTTAATTTTAACAGCGGGTACGGTAACAATGAAAATGGCTCCTTCTTTAGTAAGATTATATGAGCAAATGCCTGAACCAAAATATGTTATTGCTATGGGAGCATGTACAATTACAGGAGGGATGTTCAGTACCGATTCTTATAGTACTGTTCGGGGAGTCGATAAGTTAATTCCTGTCGATGTGTATTTGCCGGGTTGCCATGACCCCGCGTATAAGGAGAGGTCGAATTCCAAACTTTTCTCTCGAGTATACCCATTACCAAAAAATGGACGTCACTTTGGGACACATGCGGATAGCCGCCCTTTCGAAAGGGCTAAAAGTCAGCCAAAAGAGCTAAAACTCTTTTTTTTGAGTTCCCTCCCATTTCTGTACCGGTTCCGGAAGAGCGAAGAAAAAGGGGATGTTTTGTTAATAGGAACAAGAAAGTGTTTATAG

Protein sequence

MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTNCCFIEFASLIGSRFDFDRYGLVPRSSPRQANLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCHDPAYKERSNSKLFSRVYPLPKNGRHFGTHADSRPFERAKSQPKELKLFFLSSLPFLYRFRKSEEKGDVLLIGTRKCL

Homology

[Close]

BLAST of CmUC11G211250 vs. NCBI nr
Match: YP_009945421.1 (NADH-plastoquinone oxidoreductase subunit K [Sechium edule] >QOE55951.1 NADH-plastoquinone oxidoreductase subunit K [Sechium edule])

HSP 1 Score: 280.8 bits (717), Expect = 1.0e-71
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTNCCFIEFASLIGSRFDFDR 60
           MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGT+CCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSPRQANLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120
           YGLVPRSSPRQA+LILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGC 140
           STVRGVDKLIPVDVYLPGC
Sbjct: 121 STVRGVDKLIPVDVYLPGC 139

[Close]

BLAST of CmUC11G211250 vs. NCBI nr
Match: QIT04137.1 (NADH dehydrogenase subunit K [Sechium edule])

HSP 1 Score: 280.8 bits (717), Expect = 1.0e-71
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTNCCFIEFASLIGSRFDFDR 60
           MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGT+CCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSPRQANLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120
           YGLVPRSSPRQA+LILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGC 140
           STVRGVDKLIPVDVYLPGC
Sbjct: 121 STVRGVDKLIPVDVYLPGC 139

[Close]

BLAST of CmUC11G211250 vs. NCBI nr
Match: YP_009752839.1 (NADH dehydrogenase subunit K [Baijiania yunnanensis] >QIT05911.1 NADH dehydrogenase subunit K [Baijiania yunnanensis])

HSP 1 Score: 280.8 bits (717), Expect = 1.0e-71
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTNCCFIEFASLIGSRFDFDR 60
           MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGT+CCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSPRQANLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120
           YGLVPRSSPRQA+LILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGC 140
           STVRGVDKLIPVDVYLPGC
Sbjct: 121 STVRGVDKLIPVDVYLPGC 139

[Close]

BLAST of CmUC11G211250 vs. NCBI nr
Match: YP_009430631.1 (NADH dehydrogenase subunit K [Gynostemma cardiospermum] >YP_009439808.1 NADH dehydrogenase subunit K [Gynostemma laxiflorum] >YP_010015143.1 NADH dehydrogenase subunit K [Gynostemma yixingense] >ART65086.1 NADH dehydrogenase subunit K [Gynostemma cardiospermum] >ATG86666.1 NADH dehydrogenase subunit K [Gynostemma laxiflorum] >QOI14268.1 NADH dehydrogenase subunit K [Gynostemma yixingense])

HSP 1 Score: 280.8 bits (717), Expect = 1.0e-71
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTNCCFIEFASLIGSRFDFDR 60
           MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGT+CCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSPRQANLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120
           YGLVPRSSPRQA+LILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGC 140
           STVRGVDKLIPVDVYLPGC
Sbjct: 121 STVRGVDKLIPVDVYLPGC 139

[Close]

BLAST of CmUC11G211250 vs. NCBI nr
Match: YP_009004048.1 (NADH-plastoquinone oxidoreductase subunit K [Cucumis hystrix] >YP_247603.1 NADH dehydrogenase subunit K [Cucumis sativus] >Q4VZH1.1 RecName: Full=NAD(P)H-quinone oxidoreductase subunit K, chloroplastic; AltName: Full=NAD(P)H dehydrogenase subunit K; AltName: Full=NADH-plastoquinone oxidoreductase subunit K [Cucumis sativus] >ALF03305.1 NADH dehydrogenase subunit K [Cucumis sativus var. hardwickii] >AVE15335.1 NdhK [Cucumis sativus var. sativus] >AAZ94655.1 NADH dehydrogenase 32 kDa subunit [Cucumis sativus] >ABI97421.1 NADH-plastoquinone oxidoreductase subunit K [Cucumis sativus] >AHJ61390.1 NADH-plastoquinone oxidoreductase subunit K [Cucumis hystrix])

HSP 1 Score: 280.8 bits (717), Expect = 1.0e-71
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTNCCFIEFASLIGSRFDFDR 60
           MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGT+CCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSPRQANLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120
           YGLVPRSSPRQA+LILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGC 140
           STVRGVDKLIPVDVYLPGC
Sbjct: 121 STVRGVDKLIPVDVYLPGC 139

[Close]

BLAST of CmUC11G211250 vs. ExPASy Swiss-Prot
Match: Q4VZH1 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhK PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.3e-74
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTNCCFIEFASLIGSRFDFDR 60
           MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGT+CCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSPRQANLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120
           YGLVPRSSPRQA+LILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGC 140
           STVRGVDKLIPVDVYLPGC
Sbjct: 121 STVRGVDKLIPVDVYLPGC 139

[Close]

BLAST of CmUC11G211250 vs. ExPASy Swiss-Prot
Match: Q06GZ3 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Drimys granadensis OX=224735 GN=ndhK PE=3 SV=2)

HSP 1 Score: 278.9 bits (712), Expect = 5.0e-74
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTNCCFIEFASLIGSRFDFDR 60
           MNSIEFPLLDRTTQ SVISTTSNDLSNWSRLSSLWPLLYGT+CCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSPRQANLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120
           YGLVPRSSPRQA+LILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGC 140
           STVRGVDKLIPVDVYLPGC
Sbjct: 121 STVRGVDKLIPVDVYLPGC 139

[Close]

BLAST of CmUC11G211250 vs. ExPASy Swiss-Prot
Match: Q0G9L5 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Liriodendron tulipifera OX=3415 GN=ndhK PE=3 SV=2)

HSP 1 Score: 278.9 bits (712), Expect = 5.0e-74
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTNCCFIEFASLIGSRFDFDR 60
           MNSIEFPLLDRTTQ SVISTTSNDLSNWSRLSSLWPLLYGT+CCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSPRQANLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120
           YGLVPRSSPRQA+LILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGC 140
           STVRGVDKLIPVDVYLPGC
Sbjct: 121 STVRGVDKLIPVDVYLPGC 139

[Close]

BLAST of CmUC11G211250 vs. ExPASy Swiss-Prot
Match: Q0ZJ16 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhK PE=3 SV=2)

HSP 1 Score: 278.9 bits (712), Expect = 5.0e-74
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTNCCFIEFASLIGSRFDFDR 60
           MNSIEFPLLDRTTQ SVISTTSNDLSNWSRLSSLWPLLYGT+CCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSPRQANLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120
           YGLVPRSSPRQA+LILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGC 140
           STVRGVDKLIPVDVYLPGC
Sbjct: 121 STVRGVDKLIPVDVYLPGC 139

[Close]

BLAST of CmUC11G211250 vs. ExPASy Swiss-Prot
Match: B1NWF4 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Manihot esculenta OX=3983 GN=ndhK PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 6.5e-74
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTNCCFIEFASLIGSRFDFDR 60
           MNSIEFPLLDRTTQ SVISTTSNDLSNWSRLSSLWPLLYGT+CCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQISVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSPRQANLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120
           YGLVPRSSPRQA+LILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGC 140
           STVRGVDKLIPVDVYLPGC
Sbjct: 121 STVRGVDKLIPVDVYLPGC 139

[Close]

BLAST of CmUC11G211250 vs. ExPASy TrEMBL
Match: A0A218KG48 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=ndhK PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.8e-72
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTNCCFIEFASLIGSRFDFDR 60
           MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGT+CCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSPRQANLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120
           YGLVPRSSPRQA+LILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGC 140
           STVRGVDKLIPVDVYLPGC
Sbjct: 121 STVRGVDKLIPVDVYLPGC 139

[Close]

BLAST of CmUC11G211250 vs. ExPASy TrEMBL
Match: A0A0H3XZE5 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Anemone pratensis OX=445229 GN=ndhK PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.8e-72
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTNCCFIEFASLIGSRFDFDR 60
           MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGT+CCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSPRQANLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120
           YGLVPRSSPRQA+LILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGC 140
           STVRGVDKLIPVDVYLPGC
Sbjct: 121 STVRGVDKLIPVDVYLPGC 139

[Close]

BLAST of CmUC11G211250 vs. ExPASy TrEMBL
Match: A0A410HF89 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=ndhK PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.8e-72
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTNCCFIEFASLIGSRFDFDR 60
           MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGT+CCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSPRQANLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120
           YGLVPRSSPRQA+LILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGC 140
           STVRGVDKLIPVDVYLPGC
Sbjct: 121 STVRGVDKLIPVDVYLPGC 139

[Close]

BLAST of CmUC11G211250 vs. ExPASy TrEMBL
Match: A0A1X9Q1M2 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhK PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.8e-72
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTNCCFIEFASLIGSRFDFDR 60
           MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGT+CCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSPRQANLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120
           YGLVPRSSPRQA+LILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGC 140
           STVRGVDKLIPVDVYLPGC
Sbjct: 121 STVRGVDKLIPVDVYLPGC 139

[Close]

BLAST of CmUC11G211250 vs. ExPASy TrEMBL
Match: A0A346IS72 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Anemone chinensis OX=714493 GN=ndhK PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.8e-72
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTNCCFIEFASLIGSRFDFDR 60
           MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGT+CCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSPRQANLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120
           YGLVPRSSPRQA+LILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGC 140
           STVRGVDKLIPVDVYLPGC
Sbjct: 121 STVRGVDKLIPVDVYLPGC 139

[Close]

BLAST of CmUC11G211250 vs. TAIR 10
Match: ATCG00430.1 (photosystem II reaction center protein G )

HSP 1 Score: 272.7 bits (696), Expect = 2.5e-73
Identity = 132/139 (94.96%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MNSIEFPLLDRTTQTSVISTTSNDLSNWSRLSSLWPLLYGTNCCFIEFASLIGSRFDFDR 60
           MNSI+FP+LDRTT+ SVISTT NDLSNWSRLSSLWPLLYGT+CCFIEFASLIGSRFDFDR
Sbjct: 1   MNSIKFPILDRTTKNSVISTTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDR 60

Query: 61  YGLVPRSSPRQANLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120
           YGLVPRSSPRQA+LILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY
Sbjct: 61  YGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSY 120

Query: 121 STVRGVDKLIPVDVYLPGC 140
           STVRGVDKLIPVDVYLPGC
Sbjct: 121 STVRGVDKLIPVDVYLPGC 139

[Close]

BLAST of CmUC11G211250 vs. TAIR 10
Match: AT5G11770.1 (NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial )

HSP 1 Score: 140.2 bits (352), Expect = 2.0e-33
Identity = 58/117 (49.57%), Postives = 88/117 (75.21%), Query Frame = 0


Query: 23  NDLSNWSRLSSLWPLLYGTNCCFIEFASLIGSRFDFDRYGLVPRSSPRQANLILTAGTVT 82
           +DL NW+R  S+WP+ +G  CC +E      +R+D DR+G++ R SPRQ++ ++ AGT+T
Sbjct: 73  DDLMNWARTGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLT 132

Query: 83  MKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGC 140
            KMAP+L ++Y+QMPEP++VI+MG+C   GG +   SYS VRG D+++PVD+Y+PGC
Sbjct: 133 NKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHY-SYSVVRGCDRIVPVDIYVPGC 188

The following BLAST results are available for this feature:

BLAST of CmUC11G211250 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009945421.1	1.0e-71	98.56	NADH-plastoquinone oxidoreductase subunit K [Sechium edule] >QOE55951.1 NADH-pla...	[more]
QIT04137.1	1.0e-71	98.56	NADH dehydrogenase subunit K [Sechium edule]	[more]
YP_009752839.1	1.0e-71	98.56	NADH dehydrogenase subunit K [Baijiania yunnanensis] >QIT05911.1 NADH dehydrogen...	[more]
YP_009430631.1	1.0e-71	98.56	NADH dehydrogenase subunit K [Gynostemma cardiospermum] >YP_009439808.1 NADH deh...	[more]
YP_009004048.1	1.0e-71	98.56	NADH-plastoquinone oxidoreductase subunit K [Cucumis hystrix] >YP_247603.1 NADH ...	[more]

BLAST of CmUC11G211250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZH1	1.3e-74	98.56	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q06GZ3	5.0e-74	97.84	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Drimys granadensis OX...	[more]
Q0G9L5	5.0e-74	97.84	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Liriodendron tulipife...	[more]
Q0ZJ16	5.0e-74	97.84	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Vitis vinifera OX=297...	[more]
B1NWF4	6.5e-74	97.84	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Manihot esculenta OX=...	[more]

BLAST of CmUC11G211250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A218KG48	4.8e-72	98.56	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus var. ...	[more]
A0A0H3XZE5	4.8e-72	98.56	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Anemone pratensis OX=...	[more]
A0A410HF89	4.8e-72	98.56	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Trichosanthes kirilow...	[more]
A0A1X9Q1M2	4.8e-72	98.56	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus OX=36...	[more]
A0A346IS72	4.8e-72	98.56	NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Anemone chinensis OX=...	[more]

BLAST of CmUC11G211250 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00430.1	2.5e-73	94.96	photosystem II reaction center protein G	[more]
AT5G11770.1	2.0e-33	49.57	NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006138	NADH-ubiquinone oxidoreductase, 20 Kd subunit	TIGRFAM	TIGR01957	TIGR01957	coord: 17..140 e-value: 1.1E-54 score: 182.2
IPR006137	NADH:ubiquinone oxidoreductase-like, 20kDa subunit	PFAM	PF01058	Oxidored_q6	coord: 60..139 e-value: 7.2E-16 score: 58.2
None	No IPR available	GENE3D	3.40.50.12280		coord: 7..144 e-value: 9.9E-56 score: 189.6
None	No IPR available	PANTHER	PTHR11995:SF14	NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 7, MITOCHONDRIAL	coord: 3..140
None	No IPR available	PANTHER	PTHR11995	NADH DEHYDROGENASE	coord: 3..140
None	No IPR available	SUPERFAMILY	56770	HydA/Nqo6-like	coord: 16..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC11G211250.1	CmUC11G211250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0051536	iron-sulfur cluster binding