CmUC11G211060 (gene) Watermelon (USVL531) v1

Overview
NameCmUC11G211060
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionProtein Ycf2
LocationCmU531Chr11: 7683077 .. 7695141 (-)
RNA-Seq ExpressionCmUC11G211060
SyntenyCmUC11G211060
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCCGGCTATTCACGGAATGTGAGAAGCAGATGAATAATCATTCGCTTCCGGAAGAAATCGAAGAATTTCTCGGGAATCCTACAAGATCCATTCGTTCTTTTTTCTCTGACAGATGGTCACCAGCGAAGAAAACGCCTACGACTAAGTCAGGCGCACTAGCGCACCAAGCAAGAAAACGGTGGATTGACTGGCGAACTCGTGCAATCAACCAAAAGAGCCTTCGCCTCTCGAGGTTTTAATTTTTTCACAGTAGTACCTTGATTGACTTCTGCTTTACTAATGACTAAATCTCTTTCGTTGAAACCCATATTGTGACTAGCATTTGTTGCTGCCGAATAAACCAATTTTAAAATTGGATAACATGCTCGATAAGGCATGAGTTCGAGTATCAATAATTATTACGGAGAACCCGCATGGCCCAATGATCTTTTATATATTTTTCCAGTAGTAATTCTAGGTACTATTGCATGTAACGTGGGCTTAGCGGTCCTAGAACCATCAATGATTGGTGAACCCGCAGATCCATTTACTTGCATGCGTGCTCCTCCAGAAGCACACGCTAAAATAAGAGGTAAAAATTGATTGGTAGCATACTCGATCAAACGGGTGATTTTCTCGCCTACTACAGATCCCATACTACCCCCCATAAACTGAAAATCCATAACCCCAATTGCTACGGGCTATTTCACCTCCAGTCCACAGAGATTCATTTCACCGATGCGAAGAAGTCCTCTCGAGACCGTTCTGTAAGTCACGCCCTCTGGTTGGTACGAAAGACGTTCGGAGGTGAATTCGACCTTTGATTGAATCTATTATCAGTGCTAGCAACCGTAGAACCAATGAAAGGCGCCAGTTGTTGCGCTCGTTCAGGTTCCTGCTCCAGAAAAGGTGGTTGTGTATTTCCCAAGCGGAAAGTCGTTGGTGGGCAAACCAAGGCCAGTGCCCTACGTGTCCGGTAACCTGAGGTCGGGCTAACTAATGAAAGTGCAACGCCCGGTTCAGCGATACATTCATCATATTTTCGAGGATGCTTTTCACTCACTCGCTTGAGTCGGACTCAATCACTCTTTTTGTTTGGAGGATCATTCGTTCTTCACTCTCTTGTTGCTATTACCCGCAAGGAGTGCTGCAACCAAGGTGCATATTATCATATAGAAACAAGCGAAGCGTAGCGATTCGTACTACCGGAAAAGTTTCGATATAGGAAGGGGCCTTTTCTTGCTCGTTAGCGCTTTAGTTTTCAATAAGGACGTTTAGGCTTGACTAAGAGTCTCGTTAGGGCGGCTGCTCGTTTAGTATTGCTTTGGCTTCGGCTCATCCGCGAGAAAAGGCATATAAATTGTTTACTCGAGGGGATAATAGAAAGAGAATGGCTTTCTTGGAATTTCTTCGGCCGGTTGGTTGGTAGATAACTAAATCCCTATCTCCCGGTGCCCCGACTGCTTCTTTCCTAGGAGCGATTCCTACCAGGAGTTGCTAAGAGTAAAATTCGGGAAAAAGAACCCATTGTATGGGAAATACTTCAGGAAGTTATGCAGGGGCATCCCGTATTGCTAAATAGAGCGCCTACTCTGCATAGATACAGATTCATCCATCTTTCTATTCATATATCTTACTAAAAAAATGGATTTCTTAAGTTGCGTGAAGCCCCAAATCCTTGATTTGGCCAGGAAAGACTGCACTGCTTTGGGCCCAGGAAGCGAAGGGAATGAGCTCGGCTGCTTCTTCTCCACACTTTTTTTTATCCGTGTCCGTTCCGCATGCGCTTCGCGCGCGCGATTTCGATCACCTAGCAGGCCTTTTATTTGGTAGGTAACATCGCCAAAGCGTATCATCAGATTTGACTACGAAGGAAGGCACTCGAAGTGAGACGGCACCGTCTTGTGCAACGCAACGATAATTGGCCCTCTATCATCTTCGAGACGGGCGGCCGCTCAACTGTTCGAGCGTTTTCCTTTCTCCTATTATTAGAGTGGGGTGGTTGGTTCCGATTCGACAAGGGTCGAATACCTGGTCGAAGGTCCAGTACAGTAGGTAGCAGGCGTTTTCGTTTTGGCTCCCGAGCGAGAACGAGAAATAGGCGATGCACCATCCTTGCAGCTACGTACGTTGACCTTGACTTGACAGATTCATCCAATTGAACCCACACTAAAAGGAGGACCACAAGCTCGGGGGCGAAAATCAATACACATTCAAGGAGTTGTACACGAGTTTGGTAAAGCATTCACCTGTCGGTTGTACATCGACCTGTTGGGAAACTCGAAACTCTCCCGCAAGCGTCCTTCTTAGGTCGGCATTTGGCTTTGGCCTTGCTTGTTCGGTTTTGGCTTCTTGGGTTCCTTCCGCCATCCTACCCAATGAATTATTAGGATTCGTTTTCAATAGAATATTATGTATTCACGGGTTCCCTCGTTCCCATCGCCTCTCGATTAATGGTTAGGTCTTAATTCTACAATGGAGCCCGTAATAAAATTTGTTTTTGAGTCAATCTTCTCAGTCTTTATTGTCTCGGGGCTCTTGGCTTTTTTGTTCTATGAACAGATTCATCTAATTATGAATCCATCAGTCTTAATGCTTTATTACACTACCTTTTATGAGATGACCCATAGACCTTACATATTATATATTGGAATCATATATCATTCATATTCTTTTTCTCTCTTTCTTTCACCCTTCCATTTATCCGCATACTTTTATTGCTTCACAACTCATAATCGGATTGTTTTTTTTTTATGCAAAAAAGATTTCAGTTGCTACAATGATATGACCAATATAACATATCTTGACTGGTTGGTTTTTTAGATCCAGATAATGCGAAGCGATGAGTTGGTTATTAGTTTTATAATTATTAGTTCAGATTATGTATGGGCTGATCCTTCTTTTTGGTTTTAATCCTAACCTTAAAAAAACCGACGAGTCGCACACTAAGCATAGCAATTATCTCAAATGATTAATTTCATTTTTATTTAACCTTATAGAATTGCTCATTTTTTATTTAAACGAAAAAGACTGATTTGTCATTTCTTGGTCGATCATTGACTAAAACGTAAACACAAGTTGAGTAAGGGCTTATTATTGTTCGTCTACAAATATCCAAATTTTTATACCTAATACCCCATAGATAGTTCGAACTGGATAGCAACAATAATCAATTTTAGCTCGAATGGTTTGTAGAGGAACCCTTCCGCTAGTTTCTTTGATCCCACTCGGTGTTCCTTTTCCATTTGCTTCTAATAGTTCAACCTATCCAGAAAAATTGTCGGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGTCGTTTCGATATACGATTTTATCTTGTTTCACTTACCCATATTTTACCATTTCTTCGGAATTGTCCGATTATAGCCCGACGCGCTGCTTCAATGGCTCGATATGAAAGACGACCAGCAAGCAGCCCCTTGTATAGGGTTCCAAACCAATCAACCTAATAATATAATAAGAAAGGAGGGGCTTCCCGTTTTGTTTTAGCGCGCAGTGTACTAGTGAATAGGAAAAGCGGATTGAGATTACTAATGACGGATGGAGGTTGCCTATTATGAACTATTTTCCCTCAGAACAAGAATAAAAGAGGCTTGCAGGTCTAGTCGCATACCCTGAGGACGGACAAATTTCCGATAGCGAATTACTTGACTCAATGGATGGAGGGAGGGCCCCCCAACTTAAGCACGAAATCAATGTTGAGTCAACAATCATCGAGAGGGGCACCACCAAGCGAGATCGAGACCAGCACCTTGGCCTTGGATAGGGTTCCCTGCCTGCGCCGAATTCACCGCCATATGGCTGACCGGCGATTACTAGCGATTCCGGCTTCATGCAGGCGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTAACCCTCGCGGGATCACGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCTTGGAATGGAAGAACTTCCCCACCTCACTACTAAACCGTAGCTTTCTACCTTTTGATTCTGGTAATTTTGTCTCCATCATACAAGACCCGTGCCACTTTCACCTGTAGTTGCAGCAGCCGTTTTTCTTTATTATCTGCAGTGAAGATAATTGGAAGTACGCTTAGTCTTAGTATCCAAGGATTGACCTTAAATACAAGAACAAACACTCTTTTTTTACTATGGTCTTATGTCGAAAGAAGAGAGCTGACCCTAAACAAAGAGAGGTTAACTAATACGCTCGACCATAGGGAGAGGAGAGGAGCAGAGCTCGCTACTGTAATAATTTCAAATGTCTTTTTATACACTGGCGCGGATGATTGCCCCTAAGGCACCGATGGACCAACGCCTTCGTCTATCACCCGAATTTCTTGATTCACGACGTCGAGTATTTGCACTTTCGATTTCGTGACTCGACCTATAGACGGTGATACCGCCACCTTCGGAGACGTGATCCCCTCTTATTCACTTGTGCCGGTGCTCATGAAAAGCTTGGAGGTCGCAACAGAAGCACCTGAAGTACTAAACAGAATAGGTATTAGTTTGGTAATGGTTGGAGCAGCAAACTCGGATTCGGCAAGAATCTCATTTTTTGGTTGTACGAAGGGGGAATTGGCCCAAAAATTGGATAGGGGTCAAGACGCAGTAGGGCGCAAGCGGCCCTTTCGCGACTCAAACTGCCGGTACGCTTTCCGGCTCGGAACGACCGACTCAAACGGGCGGGGGCTCTCTATTTGCTTGCAATGCCGGCTGTTCGCCTTTAGTTAGAAGTAGAGGGCGCCCTTTGCCCCACACTGAAGAAAAAGTACATAAGGGGGGGACCAAGAATTGGAAATTGAATTGACAAGGTAAAGAACTCAACAATATATAGAATATATGGAATACCACCGAAACGTTTCTTTTTTTGAATTGTGCATTCAATTAATTTTAATCAAATAAGTCGGATCTTGTCCGAGACAAATTCATGATTTACTAGAAAAAAAAAAGATTCTCACTAGTTATAAGATCAGATAAGTCGTACATACAGTCTGAAAGTTGAGTCCAATATTGAAATTCTTCTATAGCTGTGATAAATCTGGATCACTCTCATTTGACTATTTGTCCCTCTGTTAGAGGTGTTCCAGAAATGTCTGCAATCGAGTAAATAGCTCGACGAACGAATGGATCGGATCGAATTGGAAAATGGAAAGATTTGTACAAGTTATACCTTTCGTCACCACTTTGTGGAAAATCGTTAGGTATGAATATGTTAGATACCTGTGACTCGATTGGTGAAATAGTATCTCTCTCCAAAAAAGCATGTTTTTTTTTACCGCCGCACAAAGAAAATATTTTGTTGCGAATGAACAAGATATTGAGGAATTGTCCATACGTAAAATCATAATTATTGATACGAGCCTTTTCCACATAATCCACATAAAAAGGGAATCTTTTGTTACAATAGAAGCAGAAGTGATGTGGATTATTCAAGAATCGAAGTCGAGTACTTTCAACGCTCATGCTATTTGAAAGAGCTTTCAACATGGAGTGGAGACTCCATAACGTACACAAAGAGTCTTCGTTCCCTCTTAAGTAGATAGGCTGGTCTATTTCGCCTTCGCTACGACCAGGAAGCTTTGACGGAAGTCCCATATCTGAGTCGCCGGAGATGCAAGTCTCCCATTGGTTCGAAGAAAACCAGAAATGGGCGGGATCTTTCATCGATAGTTATTCATTTGAGTGTTCCCGAAGGCACCCCTCTCTTTCAAGAGGATTCGCGGCATGTCAAGCCCTGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCCCCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGAAAGCCAGAATCTTTCAGAAAATGGATTCCTATTCGAAGAGTGCATAACCGCATGGATAAGCTCACACTAACCCGTCAATTTTGGATCCAATTCGGAATTTTCCTTGGGAGGTATCGGGAAGGAATTGGAATGTAATAATATCGATTCATACAGATACAGAAGAAAAGGTTCTCTATTGATTCAAACACTGTACCCGCGGGATAGGGATAGAGAAAGAGGAAAAAAACGAAGATTTCACATAGTACTTTTGATCGAAAAATCAATCTGATTTATTTCGTACCTTTCGCTCAATGAAAAAATGGGTCAGATTCTACAGGATCAAACCAGCGAAACAGCGGATCAACTGGTTCACTTTTCTCTTTTTTATCTTTCGATGTTTTTGTTAATAAAGTGGATTCTTCTTAGTCTTAGAAAGAAAGGTACGATTCTATCGTGAAGAGGCCGTCCTCTGTCCCTGAAGATCTATTTAACGATCTCATTAAGGTATGTCTAGATTTGGTTGAAAGGTATGTCCCCTGGGCTCTTAAGATCCTGTTCATGGATTAACGAAAATGTGCAAAAGCTCTATTTGCCTCTGCCATTCTATGAGTCTCTTCCTTTTTACGTATGGCATCGCCACTCCCTTTGGCAGCATCCACTAATTCAAAACTTAATTTGAAAGCCATATTTCGACCCGGACGTTTTCGGGATGCCCTCGATGGATAGACTCCTTTAACCATGACATATTTGCTTCTTTGAACATAATTTCATTTCTTTCTGAAAGAAAAAGGAATGGTTAATTACACAAAAGAAATAAGTTTTTTTTTTTTTTTTTTTCACGAGGTAGAACGAAAAATTCCTATTTATTACTGAATCGACCATAGACCAATTCCCCTTTTATTTGGGATGGGAGTATTAACTACACCCAAAATTCTGGCCCAAAAATTGGATAGGGGTCAAGACGCAGTCGGGCGCCGGCGGCTGACTCAAGTGCCCCCCGAACCGCGCGAAATGGTCGCCTATTACACGGCTCCTGGGGTGGGGGTACCTATTATTCGTCGGCGGTCCGGCGCACCCCTACTTAAAGGATGCTGCTTAATTACGAAGGAAATTCTTTCTTCATCGTGAGAGTTCCCTTTCGTTAAGTGCATCGAGCCAGGAGTGGACATCATCATCATCTGCAGACAAATCCAGATCCTCTTTCTTCATTAGCTTAGCTAAAGTGGAATAGTATGACAGGCTTTCCGGAAAATGAAACGAAACCCGCTTGATCGATATGAAAAACATGCGCTCAAAAAGACCTCCTACACCCCCCTCGCCAAGTGATCGAGTTTAGTCAGAATTTGCTCTAGAAGTTGCTCCCGCTCCGGACTGACTTCCTGGAAAGATAGGATTGGGCAATTCCGCCGGTTCTGGAGCTGACCTTCTTATTAGAGAAAGGGGAAAGGGCTTTTTTTTATAGAGGTTGAGTAAGGGGGGCGGAGCTTGAGGCTTCTCAGCCGCAGGAACAGGGAACGAATCCTCCAAAAATGGAATGAGTTCGCAATGACTACCACAATCAAGCCGCCCCCTCATCACTTACCGCTATTTTTTCTTTGGGGGAGTTCACAATGTTTTTTCTGGCGTTCCTTTCTATTGATGAAGAGGTGACCTCGTGCTCTTCAAGAAATGAAGGCAAAGGCCCCCCCGAGCTCGAGTTTACCGGGGATCTTAGAGGGGCACCCAATCAAGGCCGCCACCCTCGCCCTTTAGAGATAGGGGCGCAACAAAAAGTCTTCAAAAAAAGGCGCCGGAGGCCTCAAACTCATCCGAGTTGGAGAATGAAAAAAAAAAATTTCTCAACAAGAATGCATCAACAAAACTGCCCTTCCATATAGATCGTCGTCACATGAACTTTGTCAAGAAATTCCGGGACTTCCTATTGATCTTGATTAGTTCCAGCTTGTTGAGAGTTCTATTTTCTTTCTAGACCGGACCCTTTTTTAGACCGTCTCCTGAAACACCTGCTTATCCCGCATGTGCTTTCGGAGCCCCCCACTCATTCAATCACTTGCTTGTGATTGCAGCCATTCCCCGAAAAGGGAGAGACGAGGGAATCGTCTGCTCCTGTTTATGTGACGAATCGAACAACCATCGTTAGGTCCCGAATTCAGCGAACCACCGGATCCAGACCAAGATCTGATCTCCATTACGTGGTACGATATATCTATCGATCCAAAGAACTGACTTTCAGTTGTAAGTCATCCATTCTGCTCCTATCTAAAGTGATGCTAGGTTGTTTCACCTTCACCCTTCACAAAGACAGGTGCAGGTGCGCTTCGCTCGGCCACATGATGAACATGTTTTGAGCTAACTGCATGTCGAGCGCTTAAGCGGAGCTTGTGGTCACTCGTTCCTCGCTTGTTCCAATCCTAGTAAAGAGCCTCAGATCCGATTCTACACTACATATGATATTCCATTCCGGCCCTTACTAGCTCTTCTCTTGGTTGTACAAAGAGCATGCCCGAGGGGGCTACTACACTCACCGCACACTTGCATCACCACCAGAGCTTCGCTACCGCTTCGCCCAGCTCCTACGCCTACCACGAACGTCGAATCATCACGTGGCTGCTAAAGCAAGCTAAGCTTCACACGGCCGCCAAAAGACCCTCTCACGGCCGAAGGATCCGCAACACGTTGGAGAGCTTTTAGATCCAGCCCTAAAACGCCCATTCTCAACGAGTTCCGAAGTGATCCTCATTCTCACCGCTGCCTTCTTAAGCCGAAAGAAAGCCGGGCAAGAATCTCGGTAGTACGAAGGGGAAGCAGAATCGTATCTGGCAACTCAAGATACCATTTCTGGGCCCAAAGACGATCCTATTTTTTTCTTATATAGATAGAAATTGATCTTATCCTCTGTTATCTTCTGTTTTGGAATCAAAGAAAGATATTTTTAACCGGCTCATATGAAGTGACTTGGAATAAACGTTTCTCTGTGGAGAAAGGGAAATATCAATTTTTTCCTATAGAACGTCTACAAACAAGAGGATTTAATCGGAAATATCGACAGATTCCTGTGTGTGGAGTCCAAATAAATATGAAAATAAAAAAGATCCACTGTTCTAATTTAATCCTTATCGAATTTGAATATCAGAATAGTGGATATAGTCATGATTCAACGGGTTAGGTCCACTTACTTTTTATTTTTTTTTTTTGTCTTTTCGGCTTTTTTTTTAAAGTGTCATCGGATTCCAGTTTTGCACTAAGATTCAGGGGGGAATATGTCTCATCAGCTTTCTCTCAGTTTACAGCCACTCATGGAATTGATTATAGCATTATCATTAAAAGCAAGATATAGCTAACGTTCCTTACCTGCTATTGGAGCCATCATCACTGGGGCGTTCGCTAAGGTCTCCTTGATTTTCGCAAAGGCTTGTCGATGGACCTCTTCCCATTTGTACTCTACCTTTTTCTTTAGCAATTCCATAAGAGGGGCGCATGTATCTCTCCGGGTCATACTTGACGTATCACATCCGTCACCCCCACCCCAACTCTATCTTCCTTATCAGTGAACCGGAAATAGTGCATAGATACTCTTCAATGCTGCGGGGATGAGACGACGTGACATACTACGATCACATACAGAAGTGCAGCCCTTCGGCTCGGCAATATGGAACCTCTCAACAGCTCCCGTTCCTTTATGAGGTCCTATCGGGATAGGTAGGCCCAAGCCTTTCCCCTCTTCCCGACCGAGCAGTAGTTCCCCACGGCTGACAAATAGGAATTTAGGCCGTAAAAGATAAGCACCGGCCAGGCCTAGCTTTTTATGGTAGCTGACGCTAGAATCTTTTTATATTAGATATGAGAAACCTGATCCCTTTCGAGTCTTTCATTCCCCGCTTTCTGTCCATGTCTGGTCACTTAAAACGCTTTCTTCTCTTATTTCTTCAATTTCTAGCCAAGACGCCAAGTTAAGATTCCAGTGGAGATGAAGACCATCAGACACCGATTCTGAGGATTCAGGACACCATACAAGAGAGAGATGGAGTCGTCTGGTTGCAACACGACTTGGGAAACGTTTTTTGATGAGCTGCTCTACAGGTGTACGAGAAAGACGGGAATGTAAATAGAAAACATCGCCTGGGAAAGCCTCACGGCCTGGTGGTCGGCGTAACAATAATGACATTTGTCGATATGCCACCGCCTGTTTACTAAGATCATCATAGATTATTAATGCGTGCATTCCATTATCGCGGAAATATTCCCCCATGGCACACCTCTCTTCAAAGCCGGACGGAGGATCACTTTTTCTTTGAACGAATCTTGCTCTCTTATCTGCTTCTTCTTTTGTTGACAATTCTTCTGTTGTCGTAGAGGGAAGAACTGGTCTTTCAGGGCCCCGACGGGTCAATGCTTTGGATTCAGCCAAATCCCCTAGTATATGAAAGAGTGAAAAAGTGCTTTCGTTGTTGTGGAATAAGAAGCCTTCGTATTTTAATGCATGTATTTAATTTATTCGGAGCTATTAGAGCGGGATCCACTTTTTGGGGAATATGGGTCGAAGCAATAACAAGAATATTTCTAGAAGTTGCTTCCTAAAAAGAACTGGGTTTGGCTCGTTGCCTTTGATTCTTTACCCATAGCATAAGATAAAGGGTGCGTGCTTCAACATCTCAGTTTGAACCTTTTGCTCTTAAGGAGAAAACTACGATCTTTGCTGGACTGGCAGTTCAGCCACGTAATTTATCCCTCAAGCTGAACTGAACGAACTTGACCTGCTCCTTTAGTTTAGGGCAATAGAGTTGACTTGCTTCTCACTAACGGCTGAATCATAAGCTTCATCACTCGACTCTAAACCAAAATCGAATATATATATAATAGGATAATTATGTATCAAATTGTAAAATGCGCAATCTCAATACTTCTGCTGAAGATTTGCGGGAGCGGTAGCCGTTTCATTCCTTTTCTTTTTTATGTTAGAGGGTGCAAAATCGATTGGAGCAGGAGCTGCAACAATAGCTTTAGCTGAAGCTGCTGTCGGGTGATGGTGATCTTTTTCTCTTTCAGGGCACGGACAGCCTTGAACTCTTCCATGTCCCACAGAAAATTCTCGTTTAGATCGATATTTATCTGCTTCTTGTCTGGGCCAGAGCTCCATGCAAATTATCCTTTCAAAGTTGCAAAACACTTTCTCTTCGTACCTCAGATCAAGAGGAAGGGTAGCTTCTTAAGCTGGCCTATATATATTTATATATAAAAAAAGATTCGCTGTCTTTTAACCGTCTGTTCTTCTTTGTCAACGCTACGTTGGACCTAAAGGAAAAGGCGCAACTTAGGGCCTCTGCCCTTCCATCCCTTGGATAGATAGAGAGGGAGGGCAGAGCTTTTTTTGGTTTTTTCATGTTGTCAAAGAGTTGAACAATGGTTTTTTCGTGTGGTCAAAGAGTTGAACAATGAAAATAGATGGCGAGGCGGGTAGTAATATCAAGTGATATGATGATCCAGCCTTTTGTGGCCTGGTTAAAGAGTTTTCTGAATGGAATAAGCATTCAACCGACCATTTCCTTTCTTAAATAAGGGAGATCATTTCGATTCCATTAGTAATGAGGATTCGGAATATCACACATTGATCAATCAAAGAGAGATTCAACAACTAAAAGAAAGATCGATTCTTTGGGATCCTTCCTTTCTTCAAACGGAACGAACAGAGATAGAATCAGACCGATTCCCTAAATGTATGGATGGTATGAACTGCCTAAACAAGAATTCTTGAACAGCGAACAGCCAGAGTTATTACTCACTACACCAAAAAATTTCCATTAATGAAAGATGTAAATCCATTGGAAAATCAAAAATACGCATGCCAGATGAAATGGTTGTTGCTATCTGTTACAATACGCCGCTTTACCCTGAAAGGAAAATGAGCTTTGCTCCTCTGGGCTCCCGGCGCTCTCGTGGTTCGCGAGAAGGAAAAAGGACTCATCCTTTGTTGCATCTGGCACGAGATGATAAAGAGAGAGCTTCGTCTATCGATGAACAGTGGATTGACGCTCCCCAAACTGTGCTTGCATTTTTCATTGCACACGGCTTTACCTATGTATACATCTAAAACGCAGTTACTTCCCTAGGCAGGATTCTAACTAAGAAAGTGGAATATTCTATTGATCAACTCTTACCAAATGAACATTTCATAATAGAAATTAATGAATTTTTTTGTTATCTCTTCACTTCAGCATTTATTAAGTAA

mRNA sequence

ATGTCCCGGCTATTCACGGAATGTGAGAAGCAGATGAATAATCATTCGCTTCCGGAAGAAATCGAAGAATTTCTCGGGAATCCTACAAGATCCATTCGTTCTTTTTTCTCTGACAGATGGTCACCAGCGAAGAAAACGCCTACGACTAAGTCAGGCGCACTAGCGCACCAAGCAAGAAAACGGTGGATTGACTGGCGAACTCGTGCAATCAACCAAAAGAGCCTTCGCCTCTCGAGATCCCATACTACCCCCCATAAACTGAAAATCCATAACCCCAATTGCTACGGGCTATTTCACCTCCAGTCCACAGAGATTCATTTCACCGATGCGAAGAAGTCCTCTCGAGACCGTTCTGTTCCTGCTCCAGAAAAGGTGGTTGTGTATTTCCCAAGCGGAAAGTCGTTGGTGGGCAAACCAAGGCCAGTGCCCTACGTGTCCGAATATTATGTATTCACGGGTTCCCTCGTTCCCATCGCCTCTCGATTAATGTCGCATACCCTGAGGACGGACAAATTTCCGATAGCGAATTACTTGACTCAATGGATGGAGGGAGGGCCCCCCAACTTAAGCACGAAATCAATGTTGAGTCAACAATCATCGAGAGGGGCACCACCAAGCGAGATCGAGACCAGCACCTTGGCCTTGGATAGGGGCGCAAGCGGCCCTTTCGCGACTCAAACTGCCGGTACGCTTTCCGGCTCGGAACGACCGACTCAAACGGGCGGGGGCTCTCTATTTGCTTGCAATGCCGGCTGTTCGCCTTTAGTTAGAAGTAGAGGGCGCCCTTTGCCCCACACTGAAGAAAAACCATTCCCCGAAAAGGGAGAGACGAGGGAATCGTCTGCTCCTGTTTATGTGACGAATCGAACAACCATCGTTAGGTCCCGAATTCAGCGAACCACCGGATCCAGACCAAGATCTGATCTCCATTACGTGGTACGATATATCTATCGATCCAAAGAACTGACTTTCAGTTGAGAAAACTACGATCTTTGCTGGACTGGCAGTTCAGCCACGGCACGGACAGCCTTGAACTCTTCCATGTCCCACAGAAAATTCTCGTTTAGATCGATATTTATCTGCTTCTTGTCTGGGCCAGAGCTCCATGCAAATTATCCTTTCAAAGTTGCAAAACACTTTCTCTTCGTACCTCAGATCAAGAGGAAGGCATTTATTAAGTAA

Coding sequence (CDS)

ATGTCCCGGCTATTCACGGAATGTGAGAAGCAGATGAATAATCATTCGCTTCCGGAAGAAATCGAAGAATTTCTCGGGAATCCTACAAGATCCATTCGTTCTTTTTTCTCTGACAGATGGTCACCAGCGAAGAAAACGCCTACGACTAAGTCAGGCGCACTAGCGCACCAAGCAAGAAAACGGTGGATTGACTGGCGAACTCGTGCAATCAACCAAAAGAGCCTTCGCCTCTCGAGATCCCATACTACCCCCCATAAACTGAAAATCCATAACCCCAATTGCTACGGGCTATTTCACCTCCAGTCCACAGAGATTCATTTCACCGATGCGAAGAAGTCCTCTCGAGACCGTTCTGTTCCTGCTCCAGAAAAGGTGGTTGTGTATTTCCCAAGCGGAAAGTCGTTGGTGGGCAAACCAAGGCCAGTGCCCTACGTGTCCGAATATTATGTATTCACGGGTTCCCTCGTTCCCATCGCCTCTCGATTAATGTCGCATACCCTGAGGACGGACAAATTTCCGATAGCGAATTACTTGACTCAATGGATGGAGGGAGGGCCCCCCAACTTAAGCACGAAATCAATGTTGAGTCAACAATCATCGAGAGGGGCACCACCAAGCGAGATCGAGACCAGCACCTTGGCCTTGGATAGGGGCGCAAGCGGCCCTTTCGCGACTCAAACTGCCGGTACGCTTTCCGGCTCGGAACGACCGACTCAAACGGGCGGGGGCTCTCTATTTGCTTGCAATGCCGGCTGTTCGCCTTTAGTTAGAAGTAGAGGGCGCCCTTTGCCCCACACTGAAGAAAAACCATTCCCCGAAAAGGGAGAGACGAGGGAATCGTCTGCTCCTGTTTATGTGACGAATCGAACAACCATCGTTAGGTCCCGAATTCAGCGAACCACCGGATCCAGACCAAGATCTGATCTCCATTACGTGGTACGATATATCTATCGATCCAAAGAACTGACTTTCAGTTGA

Protein sequence

MSRLFTECEKQMNNHSLPEEIEEFLGNPTRSIRSFFSDRWSPAKKTPTTKSGALAHQARKRWIDWRTRAINQKSLRLSRSHTTPHKLKIHNPNCYGLFHLQSTEIHFTDAKKSSRDRSVPAPEKVVVYFPSGKSLVGKPRPVPYVSEYYVFTGSLVPIASRLMSHTLRTDKFPIANYLTQWMEGGPPNLSTKSMLSQQSSRGAPPSEIETSTLALDRGASGPFATQTAGTLSGSERPTQTGGGSLFACNAGCSPLVRSRGRPLPHTEEKPFPEKGETRESSAPVYVTNRTTIVRSRIQRTTGSRPRSDLHYVVRYIYRSKELTFS
Homology
BLAST of CmUC11G211060 vs. NCBI nr
Match: YP_009768378.1 (Ycf2 [Micklethwaitia carvalhoi] >YP_009768395.1 Ycf2 [Micklethwaitia carvalhoi] >QIS98996.1 Ycf2 [Micklethwaitia carvalhoi] >QIS99013.1 Ycf2 [Micklethwaitia carvalhoi])

HSP 1 Score: 86.7 bits (213), Expect = 4.1e-13
Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 0

Query: 1   MSRLFTECEKQMNNHSLPEEIEEFLGNPTRSIRSFFSDRWS 42
           MSRLFTECEKQMNNH LPEEIEEFLGNPTRSIRSFFSDRWS
Sbjct: 463 MSRLFTECEKQMNNHLLPEEIEEFLGNPTRSIRSFFSDRWS 503

BLAST of CmUC11G211060 vs. NCBI nr
Match: YP_009454410.1 (hypothetical chloroplast RF21 [Crudia harmsiana] >AUF70128.1 hypothetical chloroplast RF21 [Crudia harmsiana])

HSP 1 Score: 86.3 bits (212), Expect = 5.4e-13
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1   MSRLFTECEKQMNNHSLPEEIEEFLGNPTRSIRSFFSDRWSPAK--KTPTTKS 52
           MSRLFTECEKQMNNH LPEEIEEFLGNPTRSIRSFFSDRWS       PT +S
Sbjct: 463 MSRLFTECEKQMNNHLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERS 515

BLAST of CmUC11G211060 vs. NCBI nr
Match: YP_009767706.1 (putative ATPase linked to protein import [Neoapaloxylon tuberosum] >YP_009767723.1 putative ATPase linked to protein import [Neoapaloxylon tuberosum] >QIS98324.1 putative ATPase linked to protein import [Neoapaloxylon tuberosum] >QIS98341.1 putative ATPase linked to protein import [Neoapaloxylon tuberosum])

HSP 1 Score: 86.3 bits (212), Expect = 5.4e-13
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1   MSRLFTECEKQMNNHSLPEEIEEFLGNPTRSIRSFFSDRWSPAK--KTPTTKS 52
           MSRLFTECEKQMNNH LPEEIEEFLGNPTRSIRSFFSDRWS       PT +S
Sbjct: 463 MSRLFTECEKQMNNHLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERS 515

BLAST of CmUC11G211060 vs. NCBI nr
Match: QWY86649.1 (Ycf2 [Prioria balsamifera] >QWY86666.1 Ycf2 [Prioria balsamifera])

HSP 1 Score: 86.3 bits (212), Expect = 5.4e-13
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1   MSRLFTECEKQMNNHSLPEEIEEFLGNPTRSIRSFFSDRWSPAK--KTPTTKS 52
           MSRLFTECEKQMNNH LPEEIEEFLGNPTRSIRSFFSDRWS       PT +S
Sbjct: 459 MSRLFTECEKQMNNHLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERS 511

BLAST of CmUC11G211060 vs. NCBI nr
Match: QSX27960.1 (Ycf2 protein [Brachystegia eurycoma])

HSP 1 Score: 86.3 bits (212), Expect = 5.4e-13
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1   MSRLFTECEKQMNNHSLPEEIEEFLGNPTRSIRSFFSDRWSPAK--KTPTTKS 52
           MSRLFTECEKQMNNH LPEEIEEFLGNPTRSIRSFFSDRWS       PT +S
Sbjct: 463 MSRLFTECEKQMNNHLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERS 515

BLAST of CmUC11G211060 vs. ExPASy Swiss-Prot
Match: A6MM80 (Protein Ycf2 OS=Buxus microphylla OX=153571 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.7e-14
Identity = 42/53 (79.25%), Postives = 43/53 (81.13%), Query Frame = 0

Query: 1   MSRLFTECEKQMNNHSLPEEIEEFLGNPTRSIRSFFSDRWSPAK--KTPTTKS 52
           MSRLFTE EKQMNNH LPEEIEEFLGNPTRSIRSFFSDRWS       PT +S
Sbjct: 462 MSRLFTEREKQMNNHLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERS 514

BLAST of CmUC11G211060 vs. ExPASy Swiss-Prot
Match: Q7Y667 (Protein Ycf2 OS=Calycanthus floridus var. glaucus OX=212734 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.7e-14
Identity = 42/53 (79.25%), Postives = 43/53 (81.13%), Query Frame = 0

Query: 1   MSRLFTECEKQMNNHSLPEEIEEFLGNPTRSIRSFFSDRWSPAK--KTPTTKS 52
           MSRLFTE EKQMNNH LPEEIEEFLGNPTRSIRSFFSDRWS       PT +S
Sbjct: 456 MSRLFTEREKQMNNHLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERS 508

BLAST of CmUC11G211060 vs. ExPASy Swiss-Prot
Match: A6MMG6 (Protein Ycf2 OS=Chloranthus spicatus OX=13006 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.7e-14
Identity = 42/53 (79.25%), Postives = 43/53 (81.13%), Query Frame = 0

Query: 1   MSRLFTECEKQMNNHSLPEEIEEFLGNPTRSIRSFFSDRWSPAK--KTPTTKS 52
           MSRLFTE EKQMNNH LPEEIEEFLGNPTRSIRSFFSDRWS       PT +S
Sbjct: 465 MSRLFTEREKQMNNHLLPEEIEEFLGNPTRSIRSFFSDRWSELHPGSNPTERS 517

BLAST of CmUC11G211060 vs. ExPASy Swiss-Prot
Match: Q0G9F7 (Protein Ycf2 OS=Liriodendron tulipifera OX=3415 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.7e-14
Identity = 42/53 (79.25%), Postives = 43/53 (81.13%), Query Frame = 0

Query: 1   MSRLFTECEKQMNNHSLPEEIEEFLGNPTRSIRSFFSDRWSPAK--KTPTTKS 52
           MSRLFTE EKQMNNH LPEEIEEFLGNPTRSIRSFFSDRWS       PT +S
Sbjct: 461 MSRLFTEREKQMNNHLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERS 513

BLAST of CmUC11G211060 vs. ExPASy Swiss-Prot
Match: Q09FY5 (Protein Ycf2 OS=Platanus occidentalis OX=4403 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.7e-14
Identity = 42/53 (79.25%), Postives = 43/53 (81.13%), Query Frame = 0

Query: 1   MSRLFTECEKQMNNHSLPEEIEEFLGNPTRSIRSFFSDRWSPAK--KTPTTKS 52
           MSRLFTE EKQMNNH LPEEIEEFLGNPTRSIRSFFSDRWS       PT +S
Sbjct: 462 MSRLFTEREKQMNNHLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERS 514

BLAST of CmUC11G211060 vs. ExPASy TrEMBL
Match: A0A6H0EB49 (Protein Ycf2 OS=Micklethwaitia carvalhoi OX=1358851 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.0e-13
Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 0

Query: 1   MSRLFTECEKQMNNHSLPEEIEEFLGNPTRSIRSFFSDRWS 42
           MSRLFTECEKQMNNH LPEEIEEFLGNPTRSIRSFFSDRWS
Sbjct: 463 MSRLFTECEKQMNNHLLPEEIEEFLGNPTRSIRSFFSDRWS 503

BLAST of CmUC11G211060 vs. ExPASy TrEMBL
Match: A0A6H0DZW0 (Protein Ycf2 OS=Cynometra iripa OX=241839 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.6e-13
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1   MSRLFTECEKQMNNHSLPEEIEEFLGNPTRSIRSFFSDRWSPAK--KTPTTKS 52
           MSRLFTECEKQMNNH LPEEIEEFLGNPTRSIRSFFSDRWS       PT +S
Sbjct: 463 MSRLFTECEKQMNNHLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERS 515

BLAST of CmUC11G211060 vs. ExPASy TrEMBL
Match: A0A6H0E0R8 (Protein Ycf2 OS=Brownea grandiceps OX=162694 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.6e-13
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1   MSRLFTECEKQMNNHSLPEEIEEFLGNPTRSIRSFFSDRWSPAK--KTPTTKS 52
           MSRLFTECEKQMNNH LPEEIEEFLGNPTRSIRSFFSDRWS       PT +S
Sbjct: 463 MSRLFTECEKQMNNHLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERS 515

BLAST of CmUC11G211060 vs. ExPASy TrEMBL
Match: A0A6H0E1S6 (Protein Ycf2 OS=Hymenaea verrucosa OX=20679 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.6e-13
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1   MSRLFTECEKQMNNHSLPEEIEEFLGNPTRSIRSFFSDRWSPAK--KTPTTKS 52
           MSRLFTECEKQMNNH LPEEIEEFLGNPTRSIRSFFSDRWS       PT +S
Sbjct: 463 MSRLFTECEKQMNNHLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERS 515

BLAST of CmUC11G211060 vs. ExPASy TrEMBL
Match: A0A6H0E3W3 (Protein Ycf2 OS=Cynometra ramiflora OX=162730 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.6e-13
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1   MSRLFTECEKQMNNHSLPEEIEEFLGNPTRSIRSFFSDRWSPAK--KTPTTKS 52
           MSRLFTECEKQMNNH LPEEIEEFLGNPTRSIRSFFSDRWS       PT +S
Sbjct: 463 MSRLFTECEKQMNNHLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERS 515

BLAST of CmUC11G211060 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 74.7 bits (182), Expect = 1.5e-13
Identity = 38/53 (71.70%), Postives = 41/53 (77.36%), Query Frame = 0

Query: 1   MSRLFTECEKQMNNHSLPEEIEEFLGNPTRSIRSFFSDRWSPAK--KTPTTKS 52
           M RLFTE EK+MNNH LPEE EEFLGNPTR+IRSFFSDRWS       PT +S
Sbjct: 462 MPRLFTEREKRMNNHLLPEESEEFLGNPTRAIRSFFSDRWSELHLGSNPTERS 514

BLAST of CmUC11G211060 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 74.7 bits (182), Expect = 1.5e-13
Identity = 38/53 (71.70%), Postives = 41/53 (77.36%), Query Frame = 0

Query: 1   MSRLFTECEKQMNNHSLPEEIEEFLGNPTRSIRSFFSDRWSPAK--KTPTTKS 52
           M RLFTE EK+MNNH LPEE EEFLGNPTR+IRSFFSDRWS       PT +S
Sbjct: 462 MPRLFTEREKRMNNHLLPEESEEFLGNPTRAIRSFFSDRWSELHLGSNPTERS 514

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
YP_009768378.14.1e-1397.56Ycf2 [Micklethwaitia carvalhoi] >YP_009768395.1 Ycf2 [Micklethwaitia carvalhoi] ... [more]
YP_009454410.15.4e-1381.13hypothetical chloroplast RF21 [Crudia harmsiana] >AUF70128.1 hypothetical chloro... [more]
YP_009767706.15.4e-1381.13putative ATPase linked to protein import [Neoapaloxylon tuberosum] >YP_009767723... [more]
QWY86649.15.4e-1381.13Ycf2 [Prioria balsamifera] >QWY86666.1 Ycf2 [Prioria balsamifera][more]
QSX27960.15.4e-1381.13Ycf2 protein [Brachystegia eurycoma][more]
Match NameE-valueIdentityDescription
A6MM801.7e-1479.25Protein Ycf2 OS=Buxus microphylla OX=153571 GN=ycf2-A PE=3 SV=1[more]
Q7Y6671.7e-1479.25Protein Ycf2 OS=Calycanthus floridus var. glaucus OX=212734 GN=ycf2-A PE=3 SV=1[more]
A6MMG61.7e-1479.25Protein Ycf2 OS=Chloranthus spicatus OX=13006 GN=ycf2-A PE=3 SV=1[more]
Q0G9F71.7e-1479.25Protein Ycf2 OS=Liriodendron tulipifera OX=3415 GN=ycf2-A PE=3 SV=1[more]
Q09FY51.7e-1479.25Protein Ycf2 OS=Platanus occidentalis OX=4403 GN=ycf2-A PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A6H0EB492.0e-1397.56Protein Ycf2 OS=Micklethwaitia carvalhoi OX=1358851 GN=ycf2 PE=3 SV=1[more]
A0A6H0DZW02.6e-1381.13Protein Ycf2 OS=Cynometra iripa OX=241839 GN=ycf2 PE=3 SV=1[more]
A0A6H0E0R82.6e-1381.13Protein Ycf2 OS=Brownea grandiceps OX=162694 GN=ycf2 PE=3 SV=1[more]
A0A6H0E1S62.6e-1381.13Protein Ycf2 OS=Hymenaea verrucosa OX=20679 GN=ycf2 PE=3 SV=1[more]
A0A6H0E3W32.6e-1381.13Protein Ycf2 OS=Cynometra ramiflora OX=162730 GN=ycf2 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
ATCG00860.11.5e-1371.70Chloroplast Ycf2;ATPase, AAA type, core [more]
ATCG01280.11.5e-1371.70Chloroplast Ycf2;ATPase, AAA type, core [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008543Uncharacterised protein family Ycf2PFAMPF05695DUF825coord: 1..43
e-value: 1.8E-18
score: 65.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..276
NoneNo IPR availablePANTHERPTHR33078:SF69BNAA06G19310D PROTEINcoord: 1..44
NoneNo IPR availablePANTHERPTHR33078PROTEIN YCF2-RELATEDcoord: 1..44

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC11G211060.1CmUC11G211060.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATP hydrolysis activity