CmUC11G211020 (gene) Watermelon (USVL531) v1

Overview
NameCmUC11G211020
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionATP synthase subunit alpha, chloroplastic
LocationCmU531Chr11: 7675183 .. 7677603 (+)
RNA-Seq ExpressionCmUC11G211020
SyntenyCmUC11G211020
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACACGCACGAATTGAACATAGATACATTCACCGAATCATTGATAAAGCAATTCGGCGCTATTAATGTGGGTATTTCCGTCTCCAGAGTAGGATCTGCAGCTCAAATTAAAGCCATGAAACAAGTAGCCGGCAAATCAAAATTGGAATTGGCTCAATTTGCCGAATTAGAAGCCTTTGCGCAATTCGCTTCTGATCTCGATAAAGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACGTGAGTTGCTCAAACAATCCCAATCAGCCCCTCTCACGGTAGAAGAACAGATAATGACTATTTATACCGGAACTAATGGTTATCTTGATTCATTAGAAATTGGACAAGTAAGGAAATTTCTCGTTGAGTTACGTACTTACGTAAAAACGAATAAACCTCAGTTTCAGGAAATAATATCTTCCACGAAGACATTCACCAATGAAGCGGAAGCCCTTTTGAAAGAAGCTATTCAGGATGTAGAAAAAGCTTGGGATTTGAATGCATGTATTTAATTTATTCGGAGCTATTAGAGCGGGATCCACTTTTTGGGGAATATGGGTTGAAGCAATAACAAGAATCTTTCGAGTGGAACGAGAATCTCGATAACCTAAAAAAAAATGCAGAAGTGAGCGTACCCCACTCCTCTCTCCCCCTTTTTTAGCCAACACCATCAACCCCATTCATTTTTCACCTTGAATGAGTCAAAGCCAAAAATCAGATAAATAGAAGGAAAGGAGATCAGAAAGATACGTGGACGACTTGACTCTCGTATAGGTCGGATGTTTCCGTGAACAGTAAGCAGCGGATCTCCCCTTATTTTGGGAAAGCAGGTGGCCGCGTGTGAATTCTTTCAAGGCAAGGGGCCTGATCGACATTCTTGTTGACTCTGATCCGGTCGAGGTGGTTTTCATTTACCAGCGCGTAGGTGGTCTAAGTTCCTATGACCGAGTCTTTCTGGCCCCTGTGAACATCTTTTCTTAATGTATTAAAGAGGGCCGGGCGGAATCGAAGCGAAGAAATTCTAAGTTTATGCCACGACGATCTATATGGAAGGGCAGTTTTGTTGATGCATTCCTGTTGAGAATGAAGAAGAAGAGAGATCCTCTTTTGAACAGGAAAATTTGGTCACGTAGATCTTCGATTTTGCCGGAATTCGCATGTCAAGTATCCGCTTGGGATCATGTCTTCTTAGGGCTATTTTGGATGTACAATTCCATTTCGGTAGTAATATTCCATTTCAGTTGGAAAATGCAGTCAGATGTTTGGGGTAGTGTAAGTGATCAAGGGGTAGTAACTCATATTACGGGAGGAAACTTTGCGCAGAGTTCGATTACTATTAATGGGTGGCTTCGCGTCTTTTCTTGACTTGTCTTGGTGAATCAACCAGAACCCAATGAATAATGTGGGTCTTCGTTCAACTATTTCACGGGACTTTTAGGTAAGATGAAAAGCAGCAAGCCCATAGCATAGGAAGTTGTAGCTCAGTCTATCTTTCTGCCCAGAATGAATGCCCAACGGAACCCGTGAAAATAGGATACTCCAAATTCGGGAGTCTAAGAGTTTTATAAAACGTTCTTGATGGAAAAAAATGTGAATGAAAGATCCCACTGAATTGAATTGGGTCCATGAATCTAAGAAATAGTGAGAATTCTTGATCTCTCTCAATTCGAAAATCCAGGATTTGAATTGTAGGGACTTTATTAGATTTCACAATCCCTGTAGACATCTATCCTGCAGGGTAGGAATACCCAGAGGTCTTTGTTTACCGTTTGCTTTGGGGATCAGGTTTTTAAATCGATTACCTGATAGGTTTAGCGTTGTAAGATTTTTTTTAGGATTCTGAATTGCATTCTTCATCCATTCGACTGTTTATCATTTATCTCGATCGCTGATAATCAAACTATTGTCAGACCCTTTAGTTCCACTTCCTTTATTGGAGGTAACTTTTTGTACCGCCAGCAGAAAAAAATTTTTCTTCAGGGCCAGAGTTCTTTTCAATTTGAAAACTCAAGATATTACCAGATTTGGAAGCTAACTCCTCATCTTCACCTTACGAACTTTCTGTTCAATCTTCTTGAAAGAAGTTTTTCATTCACAGGAGGAGATGCCCTTCCTATAGCTACTATAGTCTCTATCTCTGGTGTAACATCCCTTAGTTCGTCATTCCTGATGCTAGAAAATAGGTTCCCAAAAAACTTTCCCCCTGATGCAACTTTTTTCTGCCTACTGCTTCACTAACAGAAGGACTAGGAGGAGAACTTGGAACTGAATCCGTGTCTGACTAGGGTGCTGGTGCTCTAGCAGTCAAACTTCCCCCGCGGATAGATCTCTTCTCCTTTTCTCGGCCTCTGACGCCCTCCTGCCCGGAACTAGTCCCGATGGAAGACCAGAAGACTTTTACGAACCTTGAGCTCTAA

mRNA sequence

ATGTACACGCACGAATTGAACATAGATACATTCACCGAATCATTGATAAAGCAATTCGGCGCTATTAATGTGGGTATTTCCGTCTCCAGAGTAGGATCTGCAGCTCAAATTAAAGCCATGAAACAAGTAGCCGGCAAATCAAAATTGGAATTGGCTCAATTTGCCGAATTAGAAGCCTTTGCGCAATTCGCTTCTGATCTCGATAAAGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACGTGAGTTGCTCAAACAATCCCAATCAGCCCCTCTCACGGTAGAAGAACAGATAATGACTATTTATACCGGAACTAATGGTTATCTTGATTCATTAGAAATTGGACAAGCAAGGGGCCTGATCGACATTCTTGTTGACTCTGATCCGGTCGAGGTGGTTTTCATTTACCAGCGCGTAGGTGGTCTAAGTTCCTATGACCGAGTCTTTCTGGCCCCTGGCAGTTTTGTTGATGCATTCCTGTTGAGAATGAAGAAGAAGAGAGATCCTCTTTTGAACAGGAAAATTTGGTCACGTAGATCTTCGATTTTGCCGGAATTCGCATGTCAAGTATCCGCTTGGGATCATGTCTTCTTAGGGCTATTTTGGATGTACAATTCCATTTCGGTAGTAATATTCCATTTCAGTTGGAAAATGCAGTCAGATGTTTGGGGTAGTGTAAGTGATCAAGGGACATCTATCCTGCAGGGTAGGAATACCCAGAGGTCTTTGTTTACCGTTTGCTTTGGGGATCAGGGTGCTGGTGCTCTAGCAGTCAAACTTCCCCCGCGGATAGATCTCTTCTCCTTTTCTCGGCCTCTGACGCCCTCCTGCCCGGAACTAGTCCCGATGGAAGACCAGAAGACTTTTACGAACCTTGAGCTCTAA

Coding sequence (CDS)

ATGTACACGCACGAATTGAACATAGATACATTCACCGAATCATTGATAAAGCAATTCGGCGCTATTAATGTGGGTATTTCCGTCTCCAGAGTAGGATCTGCAGCTCAAATTAAAGCCATGAAACAAGTAGCCGGCAAATCAAAATTGGAATTGGCTCAATTTGCCGAATTAGAAGCCTTTGCGCAATTCGCTTCTGATCTCGATAAAGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACGTGAGTTGCTCAAACAATCCCAATCAGCCCCTCTCACGGTAGAAGAACAGATAATGACTATTTATACCGGAACTAATGGTTATCTTGATTCATTAGAAATTGGACAAGCAAGGGGCCTGATCGACATTCTTGTTGACTCTGATCCGGTCGAGGTGGTTTTCATTTACCAGCGCGTAGGTGGTCTAAGTTCCTATGACCGAGTCTTTCTGGCCCCTGGCAGTTTTGTTGATGCATTCCTGTTGAGAATGAAGAAGAAGAGAGATCCTCTTTTGAACAGGAAAATTTGGTCACGTAGATCTTCGATTTTGCCGGAATTCGCATGTCAAGTATCCGCTTGGGATCATGTCTTCTTAGGGCTATTTTGGATGTACAATTCCATTTCGGTAGTAATATTCCATTTCAGTTGGAAAATGCAGTCAGATGTTTGGGGTAGTGTAAGTGATCAAGGGACATCTATCCTGCAGGGTAGGAATACCCAGAGGTCTTTGTTTACCGTTTGCTTTGGGGATCAGGGTGCTGGTGCTCTAGCAGTCAAACTTCCCCCGCGGATAGATCTCTTCTCCTTTTCTCGGCCTCTGACGCCCTCCTGCCCGGAACTAGTCCCGATGGAAGACCAGAAGACTTTTACGAACCTTGAGCTCTAA

Protein sequence

MYTHELNIDTFTESLIKQFGAINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQARGLIDILVDSDPVEVVFIYQRVGGLSSYDRVFLAPGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILPEFACQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSVSDQGTSILQGRNTQRSLFTVCFGDQGAGALAVKLPPRIDLFSFSRPLTPSCPELVPMEDQKTFTNLEL
Homology
[Close]
BLAST of CmUC11G211020 vs. NCBI nr
Match: YP_009236266.1 (ATP synthase CF1 alpha subunit [Gynostemma pentaphyllum] >YP_009430612.1 ATP synthase CF1 alpha subunit [Gynostemma cardiospermum] >YP_009439789.1 ATP synthase CF1 alpha subunit [Gynostemma laxiflorum] >YP_009440142.1 ATP synthase CF1 alpha subunit [Gynostemma longipes] >YP_009440316.1 ATP synthase CF1 alpha subunit [Gynostemma pubescens] >QIT05723.1 CF1 subunit alpha [Gynostemma burmanicum (nom. inval.)] >AMF83996.1 ATP synthase CF1 alpha subunit [Gynostemma pentaphyllum] >ANI25170.1 ATP synthase CF1 alpha subunit [Gynostemma pentaphyllum] >ART64976.1 ATP synthase CF1 alpha subunit [Gynostemma pentaphyllum] >ART65063.1 ATP synthase CF1 alpha subunit [Gynostemma cardiospermum])

HSP 1 Score: 180.3 bits (456), Expect = 2.5e-41
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 21  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 80
           AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR
Sbjct: 357 AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 416

Query: 81  LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR 120
           LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Sbjct: 417 LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQVR 455

[Close]
BLAST of CmUC11G211020 vs. NCBI nr
Match: YP_009560820.1 (AtpA [Trichosanthes kirilowii] >YP_009752228.1 CF1 subunit alpha [Trichosanthes baviensis] >YP_009752397.1 CF1 subunit alpha [Trichosanthes tricuspidata] >YP_009752481.1 CF1 subunit alpha [Trichosanthes tubiflora] >YP_009752566.1 CF1 subunit alpha [Trichosanthes homophylla] >YP_009753605.1 CF1 subunit alpha [Trichosanthes wallichiana] >YP_009753690.1 CF1 subunit alpha [Trichosanthes nervifolia] >YP_009753774.1 CF1 subunit alpha [Trichosanthes pilosa] >YP_009753859.1 CF1 subunit alpha [Trichosanthes lobata] >QJD26456.1 AtpA [Trichosanthes kirilowii var. japonica] >QAB33254.1 AtpA [Trichosanthes kirilowii] >QIT04202.1 CF1 subunit alpha [Trichosanthes baviensis] >QIT04624.1 CF1 subunit alpha [Trichosanthes wallichiana] >QIT04793.1 CF1 subunit alpha [Trichosanthes tricuspidata])

HSP 1 Score: 180.3 bits (456), Expect = 2.5e-41
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 21  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 80
           AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR
Sbjct: 357 AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 416

Query: 81  LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR 120
           LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Sbjct: 417 LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQVR 455

[Close]
BLAST of CmUC11G211020 vs. NCBI nr
Match: YP_009651645.1 (ATP synthase CF1 alpha subunit [Dillenia indica] >ADD31492.1 ATP synthase CF1 alpha subunit protein [Dillenia indica] >QCY72250.1 ATP synthase CF1 alpha subunit [Dillenia indica])

HSP 1 Score: 180.3 bits (456), Expect = 2.5e-41
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 21  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 80
           AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR
Sbjct: 357 AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 416

Query: 81  LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR 120
           LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Sbjct: 417 LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQVR 455

[Close]
BLAST of CmUC11G211020 vs. NCBI nr
Match: AXU40403.1 (ATP synthase CF1 alpha subunit [Gomphogyne cissiformis var. villosa] >AXU40577.1 ATP synthase CF1 alpha subunit [Gomphogyne cissiformis var. cissiformis])

HSP 1 Score: 180.3 bits (456), Expect = 2.5e-41
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 21  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 80
           AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR
Sbjct: 357 AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 416

Query: 81  LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR 120
           LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Sbjct: 417 LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQVR 455

[Close]
BLAST of CmUC11G211020 vs. NCBI nr
Match: YP_009317371.1 (ATP synthase CF1 alpha subunit [Coccinia grandis] >AOX48726.1 ATP synthase CF1 alpha subunit [Coccinia grandis] >AOX48811.1 ATP synthase CF1 alpha subunit [Coccinia grandis])

HSP 1 Score: 180.3 bits (456), Expect = 2.5e-41
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 21  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 80
           AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR
Sbjct: 357 AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 416

Query: 81  LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR 120
           LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Sbjct: 417 LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQVR 455

[Close]
BLAST of CmUC11G211020 vs. ExPASy Swiss-Prot
Match: B1A920 (ATP synthase subunit alpha, chloroplastic OS=Carica papaya OX=3649 GN=atpA PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.6e-43
Identity = 97/99 (97.98%), Postives = 97/99 (97.98%), Query Frame = 0 

Query: 21  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 80
           AINVGISVSRVGSAAQIKAMKQVAGK KLELAQFAELEAFAQFASDLDKATQNQLARGQR
Sbjct: 357 AINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQR 416

Query: 81  LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR 120
           LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Sbjct: 417 LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQVR 455

[Close]
BLAST of CmUC11G211020 vs. ExPASy Swiss-Prot
Match: Q0ZJ35 (ATP synthase subunit alpha, chloroplastic OS=Vitis vinifera OX=29760 GN=atpA PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.6e-43
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 21  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 80
           AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQF+SDLDKATQNQLARGQR
Sbjct: 357 AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFSSDLDKATQNQLARGQR 416

Query: 81  LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR 120
           LRELLKQSQ+APLTVEEQIMTIYTGTNGYLDSLEIGQ R
Sbjct: 417 LRELLKQSQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVR 455

[Close]
BLAST of CmUC11G211020 vs. ExPASy Swiss-Prot
Match: Q8S8Y3 (ATP synthase subunit alpha, chloroplastic OS=Atropa belladonna OX=33113 GN=atpA PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.1e-43
Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 0 

Query: 21  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 80
           AINVGISVSRVGSAAQIKAMKQVAGK KLELAQFAELEAFAQFASDLDKATQNQLARGQR
Sbjct: 357 AINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQR 416

Query: 81  LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR 120
           LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLE+GQ R
Sbjct: 417 LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEVGQVR 455

[Close]
BLAST of CmUC11G211020 vs. ExPASy Swiss-Prot
Match: A6MM21 (ATP synthase subunit alpha, chloroplastic OS=Buxus microphylla OX=153571 GN=atpA PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.1e-43
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 21  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 80
           AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR
Sbjct: 357 AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 416

Query: 81  LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR 120
           LRELLKQSQSAPLTVEEQI+TIYTGTNGYLDSLEIGQ +
Sbjct: 417 LRELLKQSQSAPLTVEEQIVTIYTGTNGYLDSLEIGQVK 455

[Close]
BLAST of CmUC11G211020 vs. ExPASy Swiss-Prot
Match: Q3C1H4 (ATP synthase subunit alpha, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=atpA PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.1e-43
Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 0 

Query: 21  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 80
           AINVGISVSRVGSAAQIKAMKQVAGK KLELAQFAELEAFAQFASDLDKATQNQLARGQR
Sbjct: 357 AINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQR 416

Query: 81  LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR 120
           LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLE+GQ R
Sbjct: 417 LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEVGQVR 455

[Close]
BLAST of CmUC11G211020 vs. ExPASy TrEMBL
Match: A0A291EX67 (ATP synthase subunit alpha, chloroplastic OS=Sinowilsonia henryi OX=51004 GN=atpA PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-41
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 21  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 80
           AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR
Sbjct: 357 AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 416

Query: 81  LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR 120
           LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Sbjct: 417 LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQVR 455

[Close]
BLAST of CmUC11G211020 vs. ExPASy TrEMBL
Match: A0A410HFF0 (ATP synthase subunit alpha, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=atpA PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-41
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 21  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 80
           AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR
Sbjct: 357 AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 416

Query: 81  LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR 120
           LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Sbjct: 417 LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQVR 455

[Close]
BLAST of CmUC11G211020 vs. ExPASy TrEMBL
Match: A0A4P8VUF1 (ATP synthase subunit alpha OS=Dipentodon sinicus OX=179843 GN=atpA PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-41
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 21  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 80
           AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR
Sbjct: 357 AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 416

Query: 81  LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR 120
           LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Sbjct: 417 LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQVR 455

[Close]
BLAST of CmUC11G211020 vs. ExPASy TrEMBL
Match: D3WAZ0 (ATP synthase subunit alpha, chloroplastic OS=Dillenia indica OX=4378 GN=atpA PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-41
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 21  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 80
           AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR
Sbjct: 357 AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 416

Query: 81  LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR 120
           LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Sbjct: 417 LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQVR 455

[Close]
BLAST of CmUC11G211020 vs. ExPASy TrEMBL
Match: D3WEH7 (ATP synthase subunit alpha, chloroplastic OS=Liquidambar styraciflua OX=4400 GN=atpA PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-41
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0 

Query: 21  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 80
           AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR
Sbjct: 357 AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 416

Query: 81  LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR 120
           LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQ R
Sbjct: 417 LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQVR 455

[Close]
BLAST of CmUC11G211020 vs. TAIR 10
Match: ATCG00120.1 (ATP synthase subunit alpha )

HSP 1 Score: 174.1 bits (440), Expect = 1.7e-43
Identity = 94/99 (94.95%), Postives = 96/99 (96.97%), Query Frame = 0 

Query: 21  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 80
           AINVGISVSRVGSAAQIKAMKQVAGK KLELAQFAELEAF+QF+SDLDKATQNQLARGQR
Sbjct: 357 AINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFSQFSSDLDKATQNQLARGQR 416

Query: 81  LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQAR 120
           LRELLKQSQSAPLTVEEQIMTIYTGTNGYLD LEIGQ R
Sbjct: 417 LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDGLEIGQVR 455

[Close]
BLAST of CmUC11G211020 vs. TAIR 10
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein )

HSP 1 Score: 114.4 bits (285), Expect = 1.6e-25
Identity = 62/95 (65.26%), Postives = 73/95 (76.84%), Query Frame = 0 

Query: 21  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 80
           AINVG+SVSRVGSAAQ+KAMKQV G SKLELAQ+ E+ AFAQF SDLD ATQ  L RG R
Sbjct: 637 AINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLDAATQALLNRGAR 696

Query: 81  LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 116
           L E+ KQ Q APL +E+QI+ IY   NG+ D + +
Sbjct: 697 LTEVPKQPQYAPLPIEKQILVIYAAVNGFCDRMPL 731

[Close]
BLAST of CmUC11G211020 vs. TAIR 10
Match: ATMG01190.1 (ATP synthase subunit 1 )

HSP 1 Score: 114.4 bits (285), Expect = 1.6e-25
Identity = 62/95 (65.26%), Postives = 73/95 (76.84%), Query Frame = 0 

Query: 21  AINVGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQR 80
           AINVG+SVSRVGSAAQ+KAMKQV G SKLELAQ+ E+ AFAQF SDLD ATQ  L RG R
Sbjct: 367 AINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLDAATQALLNRGAR 426

Query: 81  LRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEI 116
           L E+ KQ Q APL +E+QI+ IY   NG+ D + +
Sbjct: 427 LTEVPKQPQYAPLPIEKQILVIYAAVNGFCDRMPL 461

[Close]
BLAST of CmUC11G211020 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 99.8 bits (247), Expect = 4.0e-21
Identity = 52/92 (56.52%), Postives = 61/92 (66.30%), Query Frame = 0 

Query: 171 LLNRKIWSRRSSILPEFA----------------CQVSAWDHVFLGLFWMYNSISVVIFH 230
           LL   +++R S ++P+ A                CQVSAWDHVFLGLFWMYN+ISVVIFH
Sbjct: 548 LLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNAISVVIFH 607

Query: 231 FSWKMQSDVWGSVSDQG--TSILQGRNTQRSL 245
           FSWKMQSDVWGS+SDQG  T I  G   Q S+
Sbjct: 608 FSWKMQSDVWGSISDQGVVTHITGGNFAQSSI 639

[Close]
BLAST of CmUC11G211020 vs. TAIR 10
Match: AT5G47320.1 (ribosomal protein S19 )

HSP 1 Score: 46.2 bits (108), Expect = 5.2e-05
Identity = 22/32 (68.75%), Postives = 27/32 (84.38%), Query Frame = 0 

Query: 156 FVDAFLLRMKKKRDPLLNRKIWSRRSSILPEF 188
           FVDAFL+   KK++  LNRKIWSRRS+ILPE+
Sbjct: 141 FVDAFLM---KKKNAALNRKIWSRRSTILPEY 169

The following BLAST results are available for this feature:
BLAST of CmUC11G211020 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009236266.12.5e-4198.99ATP synthase CF1 alpha subunit [Gynostemma pentaphyllum] >YP_009430612.1 ATP syn... [more]
YP_009560820.12.5e-4198.99AtpA [Trichosanthes kirilowii] >YP_009752228.1 CF1 subunit alpha [Trichosanthes ... [more]
YP_009651645.12.5e-4198.99ATP synthase CF1 alpha subunit [Dillenia indica] >ADD31492.1 ATP synthase CF1 al... [more]
AXU40403.12.5e-4198.99ATP synthase CF1 alpha subunit [Gomphogyne cissiformis var. villosa] >AXU40577.1... [more]
YP_009317371.12.5e-4198.99ATP synthase CF1 alpha subunit [Coccinia grandis] >AOX48726.1 ATP synthase CF1 a... [more]
BLAST of CmUC11G211020 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B1A9201.6e-4397.98ATP synthase subunit alpha, chloroplastic OS=Carica papaya OX=3649 GN=atpA PE=3 ... [more]
Q0ZJ351.6e-4396.97ATP synthase subunit alpha, chloroplastic OS=Vitis vinifera OX=29760 GN=atpA PE=... [more]
Q8S8Y32.1e-4396.97ATP synthase subunit alpha, chloroplastic OS=Atropa belladonna OX=33113 GN=atpA ... [more]
A6MM212.1e-4396.97ATP synthase subunit alpha, chloroplastic OS=Buxus microphylla OX=153571 GN=atpA... [more]
Q3C1H42.1e-4396.97ATP synthase subunit alpha, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=atp... [more]
BLAST of CmUC11G211020 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A291EX671.2e-4198.99ATP synthase subunit alpha, chloroplastic OS=Sinowilsonia henryi OX=51004 GN=atp... [more]
A0A410HFF01.2e-4198.99ATP synthase subunit alpha, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=... [more]
A0A4P8VUF11.2e-4198.99ATP synthase subunit alpha OS=Dipentodon sinicus OX=179843 GN=atpA PE=3 SV=1[more]
D3WAZ01.2e-4198.99ATP synthase subunit alpha, chloroplastic OS=Dillenia indica OX=4378 GN=atpA PE=... [more]
D3WEH71.2e-4198.99ATP synthase subunit alpha, chloroplastic OS=Liquidambar styraciflua OX=4400 GN=... [more]
BLAST of CmUC11G211020 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00120.11.7e-4394.95ATP synthase subunit alpha [more]
AT2G07698.11.6e-2565.26ATPase, F1 complex, alpha subunit protein [more]
ATMG01190.11.6e-2565.26ATP synthase subunit 1 [more]
ATCG00350.14.0e-2156.52Photosystem I, PsaA/PsaB protein [more]
AT5G47320.15.2e-0568.75ribosomal protein S19 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036408Photosystem I PsaA/PsaB superfamilyGENE3D1.20.1130.10Photosystem I PsaA/PsaBcoord: 187..249
e-value: 7.2E-20
score: 72.3
IPR036408Photosystem I PsaA/PsaB superfamilySUPERFAMILY81558Photosystem I subunits PsaA/PsaBcoord: 176..233
IPR038376ATP synthase, alpha subunit, C-terminal domain superfamilyGENE3D1.20.150.20coord: 37..128
e-value: 9.9E-41
score: 140.7
IPR001280Photosystem I PsaA/PsaBPFAMPF00223PsaA_PsaBcoord: 188..234
e-value: 5.0E-19
score: 68.0
IPR000793ATP synthase, alpha subunit, C-terminalPFAMPF00306ATP-synt_ab_Ccoord: 36..117
e-value: 3.9E-35
score: 120.9
IPR000793ATP synthase, alpha subunit, C-terminalCDDcd18113ATP-synt_F1_alpha_Ccoord: 40..117
e-value: 1.00435E-47
score: 154.061
NoneNo IPR availablePANTHERPTHR48082:SF6ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTICcoord: 20..125
NoneNo IPR availablePANTHERPTHR48082ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIALcoord: 20..125
NoneNo IPR availableSUPERFAMILY47917C-terminal domain of alpha and beta subunits of F1 ATP synthasecoord: 37..127

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC11G211020.1CmUC11G211020.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0015979 photosynthesis
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0009579 thylakoid
molecular_function GO:0005524 ATP binding
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism