CmUC11G210920 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC11G210920
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Protein Ycf2
Location	CmU531Chr11: 7643534 .. 7646500 (-)
RNA-Seq Expression	CmUC11G210920
Synteny	CmUC11G210920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCCTACTCTGCTGAAAAAGGGGGCTGCTTTATTCCCTCACAAAATGCCTGTTCCACCATCTGGGCCCAGCAAGCAGCATAATTCTGTTCCGAGGCTGCGTTTCATTCCAGCAACAGTAGTATATGGTTCGAAGCGCCTTGGGGCGGCCCCTCAAATTGTGAATTTTTATTCACTTTATGATTTAATAACTCATAATCCGATCTCCCTAACTAAATATTTGCAACTTGACAATTTCAAACAGACTTTTCAAGTACTTAAATATTATTTAATGGATGAAAACGGGGGGATTTTTAATTCCGATCCATACAGTAACATCGTTTTCAATACATTTAATTTGAATTGGCATTTTCTGCATCATAATTATCACCATAATTATTGTGAAGAAAGACCTGGTCTATCGTAGTCCCCATTGCACCGCTAGATAAGAGGTTAGAATCTCAATCATGACAGTAGCAGAAATAGACACAAAAAGGAAATTCCAAGGGCTGAATGTAGACTAGCTTCAGCAAAGAAAATTAGATCGTCGGAAGTGAGAGATGGGATCGATTATCCCATAGTACTATCAAAATCTAGACATACCCAATCGAAAAAGGATGTTATCCAAACGCATTTCAAGCCCCGAAATAAGTACCCGCTACTGTCGAAGTGAATATCTCACACCGGGTAGCTTTTGCACATTTTCGTTAATCCATGAACAGGATCTATATAGACACATAGGCCCATGGATCCATACATCTCGATCGGAAAAGAATCAATAGAAAAAGAAAGAATCGGAATTGATCGATATATTTCTCGAAACAAACGAAAAGGAAACGAAACGAAAGACGAAACATAAATCATGGATCAACTAAGCCAAGCCCTCTCGGGGACTTGCTTAAGAATAAGAAAGAGGAATCTCATGTAAATACCATGGAATAAGGTTTGATCCTATTCATGGGGAATCTCGACGAAAAAAAAGGGATTGCAACTACATCAAAAACCGAGATTCGTCGACGTGAACGCACGCTTTGTCATGTTAGTGTGAGAACCTTAAATAAACTCACGATCAAGCTTTTTGATTTGTTTACTCAACTCGTAAAGGCAAACAAAAAAGGGATCCACCTCGAATCAAAACTCTTTCTCCTTAGCACAAGCACTAAGTAAGCAAGCTACCTTTCTTTTCTACGCTACGATCTTTCTTCTCTTATGAAATTCAGAGTTTGTTTGATCGAGGGCGCTTCTCCCCAATATGAGATAAGTTGGCTATAGTCCGAACAGAACTCCAACTGGGCCAATTGCGTAATTATGACCTGAGGTAGCGAACGAGACAGCAAATGGATGGAAATTCTCCACTTAATGGCTGCCGCTTAACGCTCTGGCGCTCTGAATCTCGAAGGTCTTGGTAGGATTCTGACTTGCTGGCCCGTAAACCATTTCAGTGCAGGGCCCGTAAGACTCTTCTGGAACAATCGGATGACAGCCCCTTCGTTTTTCTCTAAAGGGCAGACATCGGCACAATAGGCTTGTTGATGAGAGATGGGACAACCTTTTCCGTTGTCTTTTTCGAATTCCTTTTCACCGGGTGTGAATCAGGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTAAAAGAGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGGAACTCATCTTCTAATTCATTTTTTTTTTCTACAAACCTAGGCACTTGACGCAACTTTTCAATGTTAACCTGCTTTACTTCAGGGAAGAGTGGATGATCTGCCAGCTCTTGCAGAAATTTGTCAAAGTTGTTGTTTGCGAAAGGCTATCAACGTAGACGTATATAGATATAGTGAGTGTGTGTGCAGGGTGTAGGTATACCACTTACGAGAAAGAACCCCAAGTCAGTAAAGTAGTTAACCAAACACAAGTAAGTAGTTCGGAATAAACGTTTCTCTGTGGAGAAGGGGAAATATCAATTTTTTCCTATAGAACGTCTACAAACAAGAGGATTTAATCGGAAATATCGACAGATTCCTGTGTGTGGAGTCCAAATAAATATGAAAATAAAAAAGATCCACTGTTCTAATTTAATCAGCCCCCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGCGTTAGCTACAGCACTGCACGGGTCGATACGCACAGCGCCTAGTATCCATCGTTTACGGCTAGGACTACTGGGGTATCTAATCCCATTCGCTCCCCTAGCTTTCGAGGCATTTTCGAGTGTTTGGATGCACGTGTTTTGTTCATATTCCTGCGCTGTTAAGAGAAAAATTGTCCCCAAGGCCACCGCTTGTTTCTTTCTTGGATATGCTCAGTCCGGGTATAGATGCCCCTGGAGTTTGATCCCCAAGAAAGAGGGAAATGGCTGTGATTCAATATGAAAAGGCCAGCACTCACTCTTCAGAAAATATCGAGATGCATGTAATAATCAAGGTTTTGATTCCAGAGTCAGATTAGGGAGACAACTCCTTCAAGGCTTTGACTTACATTCCGAGGAAGACCTGGGCGGATCATCACCCCTTCATTCTGGCTCTACTTCATTCGCTATTAACAAGACAGCCCACGACCAGAGGATTTCGGCGGAAAATGGATTCTTTTATATTCGCATGGCCGGATCAAGAACAGCTCCAGCCCTATCGATTAGTATTACGCAGAAGAAATCAATTATAGACACTAATATAATTAGATCTGCTCTTCATAGACAAACTTGGGATTTGCGATCCCAGGTAAGATCGGTTCAGGATCATGGGATCCTTTTCTATCAGATAGGAAGGGCTGTTGCACAAAATGTACTTCTAAATTCACTTTATTTCAACTATCAAAAAGTCACTTTCCAATATTAG

mRNA sequence

ATGCTGCCTACTCTGCTGAAAAAGGGGGCTGCTTTATTCCCTCACAAAATGCCTGTTCCACCATCTGGGCCCAGCAAGCAGCATAATTCTGTTCCGAGGCTGCGTTTCATTCCAGCAACAGTAGTATATGGTTCGAAGCGCCTTGGGGCGGCCCCTCAAATTGTGAATTTTTATTCACTTTATGATTTAATAACTCATAATCCGATCTCCCTAACTAAATATTTGCAACTTGACAATTTCAAACAGACTTTTCAAACCTGGTCTATCGTAGTCCCCATTGCACCGCTAGATAAGAGGCAAACAAAAAAGGGATCCACCTCGAATCAAAACTCTTTCTCCTTAGCACAAGCACTAAGTCTTGGTAGGATTCTGACTTGCTGGCCCGTAAACCATTTCAGTGCAGGGCCCGGAAGAGTGGATGATCTGCCAGCTCTTGCAGAAATTTGTCAAAGTTGTTGTTTGCGAAAGGCTATCAACGTAGACGTATATAGATATAAACGTCTACAAACAAGAGGATTTAATCGGAAATATCGACAGATTCCTGTGTGCGGGATACTTAACGCGTTAGCTACAGCACTGCACGGGTCGATACGCACAGCGCCTAGTATCCATCGTTTACGGCTAGGACTACTGGGGTATCTAATCCCATTCGCTCCCCTAGCTTTCGAGGCATTTTCGAGTGTTTGGATGCACGTGTTTTGTTCATATTCCTGCGCTGTTAAGAGAAAAATTGTCCCCAAGGCCACCGCTTGTTTCTTTCTTGGATATGCTCAGTCCGGAAAATATCGAGATGCATGTAATAATCAAGGTTTTGATTCCAGAGTCAGATTAGGGAGACAACTCCTTCAAGGCTTTGACTTACATTCCGAGGAAGACCTGGGCGGATCATCACCCCTTCATTCTGGCTCTACTTCATTCGCTATTAACAAGACAGCCCACGACCAGAGGATTTCGGCGGAAAATGGATTCTTTTATATTCGCATGGCCGGATCAAGAACAGCTCCAGCCCTATCGATTAGTATTACGCAGAAGAAATCAATTATAGACACTAATATAATTAGATCTGCTCTTCATAGACAAACTTGGGATTTGCGATCCCAGGTAAGATCGGTTCAGGATCATGGGATCCTTTTCTATCAGATAGGAAGGGCTGTTGCACAAAATGTACTTCTAAATTCACTTTATTTCAACTATCAAAAAGTCACTTTCCAATATTAG

Coding sequence (CDS)

ATGCTGCCTACTCTGCTGAAAAAGGGGGCTGCTTTATTCCCTCACAAAATGCCTGTTCCACCATCTGGGCCCAGCAAGCAGCATAATTCTGTTCCGAGGCTGCGTTTCATTCCAGCAACAGTAGTATATGGTTCGAAGCGCCTTGGGGCGGCCCCTCAAATTGTGAATTTTTATTCACTTTATGATTTAATAACTCATAATCCGATCTCCCTAACTAAATATTTGCAACTTGACAATTTCAAACAGACTTTTCAAACCTGGTCTATCGTAGTCCCCATTGCACCGCTAGATAAGAGGCAAACAAAAAAGGGATCCACCTCGAATCAAAACTCTTTCTCCTTAGCACAAGCACTAAGTCTTGGTAGGATTCTGACTTGCTGGCCCGTAAACCATTTCAGTGCAGGGCCCGGAAGAGTGGATGATCTGCCAGCTCTTGCAGAAATTTGTCAAAGTTGTTGTTTGCGAAAGGCTATCAACGTAGACGTATATAGATATAAACGTCTACAAACAAGAGGATTTAATCGGAAATATCGACAGATTCCTGTGTGCGGGATACTTAACGCGTTAGCTACAGCACTGCACGGGTCGATACGCACAGCGCCTAGTATCCATCGTTTACGGCTAGGACTACTGGGGTATCTAATCCCATTCGCTCCCCTAGCTTTCGAGGCATTTTCGAGTGTTTGGATGCACGTGTTTTGTTCATATTCCTGCGCTGTTAAGAGAAAAATTGTCCCCAAGGCCACCGCTTGTTTCTTTCTTGGATATGCTCAGTCCGGAAAATATCGAGATGCATGTAATAATCAAGGTTTTGATTCCAGAGTCAGATTAGGGAGACAACTCCTTCAAGGCTTTGACTTACATTCCGAGGAAGACCTGGGCGGATCATCACCCCTTCATTCTGGCTCTACTTCATTCGCTATTAACAAGACAGCCCACGACCAGAGGATTTCGGCGGAAAATGGATTCTTTTATATTCGCATGGCCGGATCAAGAACAGCTCCAGCCCTATCGATTAGTATTACGCAGAAGAAATCAATTATAGACACTAATATAATTAGATCTGCTCTTCATAGACAAACTTGGGATTTGCGATCCCAGGTAAGATCGGTTCAGGATCATGGGATCCTTTTCTATCAGATAGGAAGGGCTGTTGCACAAAATGTACTTCTAAATTCACTTTATTTCAACTATCAAAAAGTCACTTTCCAATATTAG

Protein sequence

MLPTLLKKGAALFPHKMPVPPSGPSKQHNSVPRLRFIPATVVYGSKRLGAAPQIVNFYSLYDLITHNPISLTKYLQLDNFKQTFQTWSIVVPIAPLDKRQTKKGSTSNQNSFSLAQALSLGRILTCWPVNHFSAGPGRVDDLPALAEICQSCCLRKAINVDVYRYKRLQTRGFNRKYRQIPVCGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFEAFSSVWMHVFCSYSCAVKRKIVPKATACFFLGYAQSGKYRDACNNQGFDSRVRLGRQLLQGFDLHSEEDLGGSSPLHSGSTSFAINKTAHDQRISAENGFFYIRMAGSRTAPALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLNSLYFNYQKVTFQY

Homology

[Close]

BLAST of CmUC11G210920 vs. NCBI nr
Match: ANY93419.1 (Ycf2 [Hagenia abyssinica] >ANY93447.1 Ycf2 [Hagenia abyssinica] >ARD04196.1 hypothetical protein RF2 [Hagenia abyssinica])

HSP 1 Score: 114.4 bits (285), Expect = 2.3e-21
Identity = 62/86 (72.09%), Postives = 69/86 (80.23%), Query Frame = 0


Query: 314  DQRISAENGFFYIRMAG------SRTAPALSISITQKKSIIDTNIIRSALHRQTWDLRSQ 373
            ++++   NGF YI M        + T  ALSISITQ KSIIDTNIIRSALHRQTWDLRSQ
Sbjct: 1824 EKKMFYTNGFGYITMGSNIRDLVALTNEALSISITQNKSIIDTNIIRSALHRQTWDLRSQ 1883

Query: 374  VRSVQDHGILFYQIGRAVAQNVLLNS 394
            VRSVQDHGILFYQIGRAVAQNVLL++
Sbjct: 1884 VRSVQDHGILFYQIGRAVAQNVLLSN 1909

[Close]

BLAST of CmUC11G210920 vs. NCBI nr
Match: ARC96694.1 (hypothetical protein RF2 [Leucosidea sericea])

HSP 1 Score: 114.4 bits (285), Expect = 2.3e-21
Identity = 62/86 (72.09%), Postives = 69/86 (80.23%), Query Frame = 0


Query: 314  DQRISAENGFFYIRMAG------SRTAPALSISITQKKSIIDTNIIRSALHRQTWDLRSQ 373
            ++++   NGF YI M        + T  ALSISITQ KSIIDTNIIRSALHRQTWDLRSQ
Sbjct: 1824 EKKMFYTNGFGYITMGSNIRDLVALTNEALSISITQNKSIIDTNIIRSALHRQTWDLRSQ 1883

Query: 374  VRSVQDHGILFYQIGRAVAQNVLLNS 394
            VRSVQDHGILFYQIGRAVAQNVLL++
Sbjct: 1884 VRSVQDHGILFYQIGRAVAQNVLLSN 1909

[Close]

BLAST of CmUC11G210920 vs. NCBI nr
Match: CAB4314532.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 114.4 bits (285), Expect = 2.3e-21
Identity = 62/79 (78.48%), Postives = 66/79 (83.54%), Query Frame = 0


Query: 321 NGFFYIRMAG------SRTAPALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDH 380
           NGF +I M        + T  ALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDH
Sbjct: 5   NGFGFITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDH 64

Query: 381 GILFYQIGRAVAQNVLLNS 394
           GILFYQIGRAVAQNVLL++
Sbjct: 65  GILFYQIGRAVAQNVLLSN 83

[Close]

BLAST of CmUC11G210920 vs. NCBI nr
Match: YP_009912686.1 (hypothetical protein RF2 [Agrimonia pilosa] >YP_009912703.1 hypothetical protein RF2 [Agrimonia pilosa] >QTX96623.1 Ycf2 [Agrimonia pilosa var. nepalensis] >ARC97701.1 hypothetical protein RF2 [Agrimonia pilosa] >QJW34402.1 hypothetical protein RF2 [Agrimonia pilosa] >QJW34403.1 hypothetical protein RF2 [Agrimonia pilosa] >QLJ92392.1 hypothetical protein RF2 [Agrimonia pilosa])

HSP 1 Score: 114.4 bits (285), Expect = 2.3e-21
Identity = 62/86 (72.09%), Postives = 69/86 (80.23%), Query Frame = 0


Query: 314  DQRISAENGFFYIRMAG------SRTAPALSISITQKKSIIDTNIIRSALHRQTWDLRSQ 373
            ++++   NGF YI M        + T  ALSISITQ KSIIDTNIIRSALHRQTWDLRSQ
Sbjct: 1824 EKKMFYTNGFGYITMGSNIRDLVALTNEALSISITQNKSIIDTNIIRSALHRQTWDLRSQ 1883

Query: 374  VRSVQDHGILFYQIGRAVAQNVLLNS 394
            VRSVQDHGILFYQIGRAVAQNVLL++
Sbjct: 1884 VRSVQDHGILFYQIGRAVAQNVLLSN 1909

[Close]

BLAST of CmUC11G210920 vs. NCBI nr
Match: AEK78231.1 (hypothetical chloroplast RF2 [Mirabilis jalapa])

HSP 1 Score: 114.0 bits (284), Expect = 3.0e-21
Identity = 62/86 (72.09%), Postives = 69/86 (80.23%), Query Frame = 0


Query: 314  DQRISAENGFFYIRMAG------SRTAPALSISITQKKSIIDTNIIRSALHRQTWDLRSQ 373
            ++++   NGF +I M        S T  ALSISITQKKSIIDTN IRSALHRQTWDLRSQ
Sbjct: 1815 EKKMFHTNGFGFITMGSNVRDLVSLTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQ 1874

Query: 374  VRSVQDHGILFYQIGRAVAQNVLLNS 394
            VRSVQDHGILFYQIGRAVAQNVLL++
Sbjct: 1875 VRSVQDHGILFYQIGRAVAQNVLLSN 1900

[Close]

BLAST of CmUC11G210920 vs. ExPASy Swiss-Prot
Match: Q06GT4 (Protein Ycf2 OS=Drimys granadensis OX=224735 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.2e-23
Identity = 61/86 (70.93%), Postives = 69/86 (80.23%), Query Frame = 0


Query: 314  DQRISAENGFFYIRMAGSR------TAPALSISITQKKSIIDTNIIRSALHRQTWDLRSQ 373
            ++++S  NGF  I M  +       T  ALSISITQKKSIIDTN IRSALHRQTWDLRS+
Sbjct: 1837 EKKMSHTNGFGSITMGSNARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSE 1896

Query: 374  VRSVQDHGILFYQIGRAVAQNVLLNS 394
            VRSVQDHGILFYQIGRAVAQNVLL++
Sbjct: 1897 VRSVQDHGILFYQIGRAVAQNVLLSN 1922

[Close]

BLAST of CmUC11G210920 vs. ExPASy Swiss-Prot
Match: Q09FY5 (Protein Ycf2 OS=Platanus occidentalis OX=4403 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.2e-23
Identity = 62/86 (72.09%), Postives = 68/86 (79.07%), Query Frame = 0


Query: 314  DQRISAENGFFYIRMAGSR------TAPALSISITQKKSIIDTNIIRSALHRQTWDLRSQ 373
            +++I   NGF  I M  +       T  ALSISITQKKSIIDTN IRSALHRQTWDLRSQ
Sbjct: 1830 EKKIFHTNGFGSITMGSNARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQ 1889

Query: 374  VRSVQDHGILFYQIGRAVAQNVLLNS 394
            VRSVQDHGILFYQIGRAVAQNVLL++
Sbjct: 1890 VRSVQDHGILFYQIGRAVAQNVLLSN 1915

[Close]

BLAST of CmUC11G210920 vs. ExPASy Swiss-Prot
Match: A4QKX4 (Protein Ycf2 A OS=Crucihimalaya wallichii OX=78192 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.0e-23
Identity = 61/86 (70.93%), Postives = 68/86 (79.07%), Query Frame = 0


Query: 314  DQRISAENGFFYIRMAGSR------TAPALSISITQKKSIIDTNIIRSALHRQTWDLRSQ 373
            ++++   NGF  I M  S       T  ALSISITQKKSIIDTN IRSALHRQTWDLRSQ
Sbjct: 1837 EKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQ 1896

Query: 374  VRSVQDHGILFYQIGRAVAQNVLLNS 394
            VRSVQDHGILFYQIGRAVAQNVL+++
Sbjct: 1897 VRSVQDHGILFYQIGRAVAQNVLISN 1922

[Close]

BLAST of CmUC11G210920 vs. ExPASy Swiss-Prot
Match: A4QKZ7 (Protein Ycf2 B OS=Crucihimalaya wallichii OX=78192 GN=ycf2-B PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.0e-23
Identity = 61/86 (70.93%), Postives = 68/86 (79.07%), Query Frame = 0


Query: 314  DQRISAENGFFYIRMAGSR------TAPALSISITQKKSIIDTNIIRSALHRQTWDLRSQ 373
            ++++   NGF  I M  S       T  ALSISITQKKSIIDTN IRSALHRQTWDLRSQ
Sbjct: 1837 EKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQ 1896

Query: 374  VRSVQDHGILFYQIGRAVAQNVLLNS 394
            VRSVQDHGILFYQIGRAVAQNVL+++
Sbjct: 1897 VRSVQDHGILFYQIGRAVAQNVLISN 1922

[Close]

BLAST of CmUC11G210920 vs. ExPASy Swiss-Prot
Match: A4QJF8 (Protein Ycf2 OS=Aethionema cordifolium OX=434059 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.0e-23
Identity = 61/86 (70.93%), Postives = 68/86 (79.07%), Query Frame = 0


Query: 314  DQRISAENGFFYIRMAGSR------TAPALSISITQKKSIIDTNIIRSALHRQTWDLRSQ 373
            ++++   NGF  I M  S       T  ALSISITQKKSIIDTN IRSALHRQTWDLRSQ
Sbjct: 1842 EKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQ 1901

Query: 374  VRSVQDHGILFYQIGRAVAQNVLLNS 394
            VRSVQDHGILFYQIGRAVAQNVL+++
Sbjct: 1902 VRSVQDHGILFYQIGRAVAQNVLISN 1927

[Close]

BLAST of CmUC11G210920 vs. ExPASy TrEMBL
Match: A0A1B2FKT2 (Protein Ycf2 OS=Hagenia abyssinica OX=57921 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-21
Identity = 62/86 (72.09%), Postives = 69/86 (80.23%), Query Frame = 0


Query: 314  DQRISAENGFFYIRMAG------SRTAPALSISITQKKSIIDTNIIRSALHRQTWDLRSQ 373
            ++++   NGF YI M        + T  ALSISITQ KSIIDTNIIRSALHRQTWDLRSQ
Sbjct: 1824 EKKMFYTNGFGYITMGSNIRDLVALTNEALSISITQNKSIIDTNIIRSALHRQTWDLRSQ 1883

Query: 374  VRSVQDHGILFYQIGRAVAQNVLLNS 394
            VRSVQDHGILFYQIGRAVAQNVLL++
Sbjct: 1884 VRSVQDHGILFYQIGRAVAQNVLLSN 1909

[Close]

BLAST of CmUC11G210920 vs. ExPASy TrEMBL
Match: A0A1V0IMK5 (Protein Ycf2 OS=Agrimonia pilosa OX=74656 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-21
Identity = 62/86 (72.09%), Postives = 69/86 (80.23%), Query Frame = 0


Query: 314  DQRISAENGFFYIRMAG------SRTAPALSISITQKKSIIDTNIIRSALHRQTWDLRSQ 373
            ++++   NGF YI M        + T  ALSISITQ KSIIDTNIIRSALHRQTWDLRSQ
Sbjct: 1824 EKKMFYTNGFGYITMGSNIRDLVALTNEALSISITQNKSIIDTNIIRSALHRQTWDLRSQ 1883

Query: 374  VRSVQDHGILFYQIGRAVAQNVLLNS 394
            VRSVQDHGILFYQIGRAVAQNVLL++
Sbjct: 1884 VRSVQDHGILFYQIGRAVAQNVLLSN 1909

[Close]

BLAST of CmUC11G210920 vs. ExPASy TrEMBL
Match: A0A1V0IJR6 (Protein Ycf2 OS=Leucosidea sericea OX=137445 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-21
Identity = 62/86 (72.09%), Postives = 69/86 (80.23%), Query Frame = 0


Query: 314  DQRISAENGFFYIRMAG------SRTAPALSISITQKKSIIDTNIIRSALHRQTWDLRSQ 373
            ++++   NGF YI M        + T  ALSISITQ KSIIDTNIIRSALHRQTWDLRSQ
Sbjct: 1824 EKKMFYTNGFGYITMGSNIRDLVALTNEALSISITQNKSIIDTNIIRSALHRQTWDLRSQ 1883

Query: 374  VRSVQDHGILFYQIGRAVAQNVLLNS 394
            VRSVQDHGILFYQIGRAVAQNVLL++
Sbjct: 1884 VRSVQDHGILFYQIGRAVAQNVLLSN 1909

[Close]

BLAST of CmUC11G210920 vs. ExPASy TrEMBL
Match: A0A6J5XQQ2 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS38991 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-21
Identity = 62/79 (78.48%), Postives = 66/79 (83.54%), Query Frame = 0


Query: 321 NGFFYIRMAG------SRTAPALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDH 380
           NGF +I M        + T  ALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDH
Sbjct: 5   NGFGFITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSALHRQTWDLRSQVRSVQDH 64

Query: 381 GILFYQIGRAVAQNVLLNS 394
           GILFYQIGRAVAQNVLL++
Sbjct: 65  GILFYQIGRAVAQNVLLSN 83

[Close]

BLAST of CmUC11G210920 vs. ExPASy TrEMBL
Match: A0A7D0LA60 (Protein Ycf2 OS=Ziziphus incurva OX=478038 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.5e-21
Identity = 63/86 (73.26%), Postives = 69/86 (80.23%), Query Frame = 0


Query: 314  DQRISAENGFFYIRMAG------SRTAPALSISITQKKSIIDTNIIRSALHRQTWDLRSQ 373
            ++++   NGF  I M        + T  ALSISITQKKSIIDTNIIRSALHRQTWDLRSQ
Sbjct: 1845 EKKMFHTNGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNIIRSALHRQTWDLRSQ 1904

Query: 374  VRSVQDHGILFYQIGRAVAQNVLLNS 394
            VRSVQDHGILFYQIGRAVAQNVLL+S
Sbjct: 1905 VRSVQDHGILFYQIGRAVAQNVLLSS 1930

[Close]

BLAST of CmUC11G210920 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-24
Identity = 61/86 (70.93%), Postives = 68/86 (79.07%), Query Frame = 0


Query: 314  DQRISAENGFFYIRMAGSR------TAPALSISITQKKSIIDTNIIRSALHRQTWDLRSQ 373
            ++++   NGF  I M  S       T  ALSISITQKKSIIDTN IRSALHRQTWDLRSQ
Sbjct: 1838 EKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQ 1897

Query: 374  VRSVQDHGILFYQIGRAVAQNVLLNS 394
            VRSVQDHGILFYQIGRAVAQNVL+++
Sbjct: 1898 VRSVQDHGILFYQIGRAVAQNVLISN 1923

[Close]

BLAST of CmUC11G210920 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-24
Identity = 61/86 (70.93%), Postives = 68/86 (79.07%), Query Frame = 0


Query: 314  DQRISAENGFFYIRMAGSR------TAPALSISITQKKSIIDTNIIRSALHRQTWDLRSQ 373
            ++++   NGF  I M  S       T  ALSISITQKKSIIDTN IRSALHRQTWDLRSQ
Sbjct: 1838 EKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQ 1897

Query: 374  VRSVQDHGILFYQIGRAVAQNVLLNS 394
            VRSVQDHGILFYQIGRAVAQNVL+++
Sbjct: 1898 VRSVQDHGILFYQIGRAVAQNVLISN 1923

[Close]

BLAST of CmUC11G210920 vs. TAIR 10
Match: AT2G07722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:ATMG00620.1); Has 15 Blast hits to 15 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 7.4e-10
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 0


Query: 1   MLPTLLKKGAALFPHKMPVPPSGPSKQHNSVPRLRFI 38
           MLPTL +KGAA FP KMPVPPSGPSKQHNS PR  F+
Sbjct: 98  MLPTLPQKGAAFFPPKMPVPPSGPSKQHNSAPRSDFV 134

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BLAST of CmUC11G210920 vs. TAIR 10
Match: ATMG00170.1 (hypothetical protein )

HSP 1 Score: 62.8 bits (151), Expect = 7.4e-10
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 0


Query: 1   MLPTLLKKGAALFPHKMPVPPSGPSKQHNSVPRLRFI 38
           MLPTL +KGAA FP KMPVPPSGPSKQHNS PR  F+
Sbjct: 98  MLPTLPQKGAAFFPPKMPVPPSGPSKQHNSAPRSDFV 134

[Close]

BLAST of CmUC11G210920 vs. TAIR 10
Match: ATMG00620.1 (hypothetical protein )

HSP 1 Score: 62.8 bits (151), Expect = 7.4e-10
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = 0


Query: 1   MLPTLLKKGAALFPHKMPVPPSGPSKQHNSVPRLRFI 38
           MLPTL +KGAA FP KMPVPPSGPSKQHNS PR  F+
Sbjct: 98  MLPTLPQKGAAFFPPKMPVPPSGPSKQHNSAPRSDFV 134

The following BLAST results are available for this feature:

BLAST of CmUC11G210920 vs. NCBI nr


Match Name	E-value	Identity	Description
ANY93419.1	2.3e-21	72.09	Ycf2 [Hagenia abyssinica] >ANY93447.1 Ycf2 [Hagenia abyssinica] >ARD04196.1 hypo...	[more]
ARC96694.1	2.3e-21	72.09	hypothetical protein RF2 [Leucosidea sericea]	[more]
CAB4314532.1	2.3e-21	78.48	unnamed protein product [Prunus armeniaca]	[more]
YP_009912686.1	2.3e-21	72.09	hypothetical protein RF2 [Agrimonia pilosa] >YP_009912703.1 hypothetical protein...	[more]
AEK78231.1	3.0e-21	72.09	hypothetical chloroplast RF2 [Mirabilis jalapa]	[more]

BLAST of CmUC11G210920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q06GT4	1.2e-23	70.93	Protein Ycf2 OS=Drimys granadensis OX=224735 GN=ycf2-A PE=3 SV=1	[more]
Q09FY5	1.2e-23	72.09	Protein Ycf2 OS=Platanus occidentalis OX=4403 GN=ycf2-A PE=3 SV=1	[more]
A4QKX4	2.0e-23	70.93	Protein Ycf2 A OS=Crucihimalaya wallichii OX=78192 GN=ycf2-A PE=3 SV=1	[more]
A4QKZ7	2.0e-23	70.93	Protein Ycf2 B OS=Crucihimalaya wallichii OX=78192 GN=ycf2-B PE=3 SV=1	[more]
A4QJF8	2.0e-23	70.93	Protein Ycf2 OS=Aethionema cordifolium OX=434059 GN=ycf2-A PE=3 SV=1	[more]

BLAST of CmUC11G210920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1B2FKT2	1.1e-21	72.09	Protein Ycf2 OS=Hagenia abyssinica OX=57921 GN=ycf2 PE=3 SV=1	[more]
A0A1V0IMK5	1.1e-21	72.09	Protein Ycf2 OS=Agrimonia pilosa OX=74656 GN=ycf2 PE=3 SV=1	[more]
A0A1V0IJR6	1.1e-21	72.09	Protein Ycf2 OS=Leucosidea sericea OX=137445 GN=ycf2 PE=3 SV=1	[more]
A0A6J5XQQ2	1.1e-21	78.48	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS38991 PE=...	[more]
A0A7D0LA60	1.5e-21	73.26	Protein Ycf2 OS=Ziziphus incurva OX=478038 GN=ycf2 PE=3 SV=1	[more]

BLAST of CmUC11G210920 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00860.1	1.4e-24	70.93	Chloroplast Ycf2;ATPase, AAA type, core	[more]
ATCG01280.1	1.4e-24	70.93	Chloroplast Ycf2;ATPase, AAA type, core	[more]
AT2G07722.1	7.4e-10	78.38	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
ATMG00170.1	7.4e-10	78.38	hypothetical protein	[more]
ATMG00620.1	7.4e-10	78.38	hypothetical protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33078	PROTEIN YCF2-RELATED	coord: 333..392
None	No IPR available	PANTHER	PTHR33078:SF43	PROTEIN YCF2	coord: 333..392

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC11G210920.1	CmUC11G210920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity