CmUC11G210160 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC11G210160
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	RNase H domain-containing protein
Location	CmU531Chr11: 6701331 .. 6703882 (+)
RNA-Seq Expression	CmUC11G210160
Synteny	CmUC11G210160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCCTATTGGCTTCAATATTATATCAGATCTGGATGTAATCTGGCACAATGGTCAATCACATCTTCAACAGTGTTCCTTGGAACACAAGCCCTATCTTGTGCCATTGGTTTGGAGTTCGCTCACTGTAGGTTCTGAGAGCAGTTTCAAATGCTACCTTCTTAGTTCACGTCCACTATCTCCTCTACTCTTTATCATTAGACATTGTTGATTTGCTTAGCAAACCAACTTCAAATCTTTTAAACGGTTGTATTGGAAATTGAGTAATATTATATAGAGAAGCCAAGCATCGGTAGCTTGGTTGGTGAAATGAAAAATGTCACTATATATGTAAATGGCAAATCAAGAAAGTAATCCGAGTGTTATTTATTTATCTTTTCTAAGAAACGATGATGGAAAATCCGTTCATGAATGTGCAAGAAAATGGAAGGTGAACTCAAGAATTGTATTTTCTTTGAAAAACTAGAGGTAGCCAGAATTGGTACCATCTATGAACATATTGTTAGAAAAGAAATAAAGATGACAAATGAGTTGAGATAGCGATATCATTGATTCTTTATCTTGATGACAAGTGTTCCTCCAAGAAACTTGAAGGTGGGAATTTGCTTTCCATATTGCGTATCTCTAGAAAGTGTGAAAAGTATGTTACATATGCATTGCTACTTGTTGTGATTGATATGTACTACATTTCTTGAAGTAGAAGGTTCAAACTCTCCTCCTCTACTTGTTGTACTAAAAAAAACTCGAATTTGTATCCATTCTAGATAATTTATTGTTATTTGACTTAATACATGAAGTTGCCAACTTTAGATATACTTTAATCATTCAACCTAAATGGGCTATTTAAATTAGGGAGGAAGTGGGTTAGTTGGTAATTCAAAATAAAAATTTATATTGTTTCAAACACCATTTTCCCCCTATTTTTTATTTTGTTAATTTAAAAATTACTAATTCTTTATATTGATGACAAGTGTGACATTGTTGATTTGTTGGCCATATGACTCCTATTTGCACGAATAGAGATTTGGCCTCAATGAGGGTTCGGGATATTATTAACAGTGATGGAAATTAGATTCTAATTTGATTTCTAGCATTTTTCTTCCTAGTGATGCAAAGTCTATTCTTAGTGTTCCCCATTGGGGATATGGGGAGTGGATGAGATTATTTAGGATTTTGACCCCAATGACTGTTTCTCTATTAAGAGTGCATACAATTTAGCGGTAAACTTAAAAGCGTCGCTTGATGATTATAGTTCTAACCTTCTGAAGAGTAAGCCTTCTGGAAGTCTGTCTGGAGTCTTCGAGTGCCCCCAAGGGTTAAAATGATGGTGTGGAAGTCCATTACCAATTCTCTGCCCACCCTAGGCAACATTACAAAGAAAGGAATTGTTATTAACTCCCTTTGTTTATTTTGTAGGAAATTTGTGGAAACATCAAGCCATGTGTTGTAGGGGTGTAAATTTACTAGAAGTATTTGGCTTTCTATATTTCCTTCCTTAGTTGGTTTTCTGTCTAGTTTCAAGGACTGTTGGAGCCCAGCAGACTGTTGGGACAGAGTGTTGATGAAGTTGTATGGTTCGGATCGAGATACCGTTGCCATCCTTTTATGGGATGTCTAGATTTACAGGAACTTTTTACTGCATGCAATGTTTTGGTTGGCAAGATCTCTTTGCATATGGAGGAGTTTTGTGGGGGTAGTAGCGTTGATCGGTTGTTCTTTAGGAGGGAGATTCTGAGGAGTCAGGAGGTGTGGGTGTCGCCTGAATCGGGGTTTTGGAAGATCAACACCGATGCCTCGTGGTTTGAGCTTGAAGGGGTGGGTGGTATTAGTTGGGTGGTTCGTGACTCGTTTGGCTCTCTTATCCTAGCTGGGTGTGAGAAAGTGGTCCTCTTTTGGCCCATTAAGTTCCTTGACGCCTTGGCGTTGATTAGGGGTCTGAAAGCTCTCGTTGACTATTTTGCTCATGGATCCCTTTTCGATGTTTTGGTGGAGTCTGATTGTGTGAATCTTATCAATGCCATTAACCATAAGATTCAAGACTTGTCGAAGTTGTCGAGTTTTGTTGAGGAGATGGGGACTTTGGCCGTTTCTGCTCATGTGGTTTTCTTTTGTTGGTGTATGCGGTCTGCGAATGGATTGGTGCATCGTTTGGCTCGTGCTGCAGTGTTGAGTGGTGATTGGATGAGGTTTTTTTTTTATTTTTTTTTATTTTTCTTTTATCTATGAAGAAGTGGTTAGGATCCCTTGTTTTATTCTAGACTCATTCTCCTCGGTCTTTGGAGAGGAAGGTTGTGGTTGTTGTTAGCTTCTTTGAATGAATTTCTTCTTTAAAAAAAAAAAAATGTCAATGAAAATATAATCCAAAACAAATAGATATTAGCAATCTCACAAGTTAAGGCATAAGCTATAGGAAATGACAAACTCACTCGTTAAGGCCTATTCTTTCGAAAAGAGATTCAAATCCTCTATTACACTTGAGCTTATAAAAAACCCCTTTGACATGTAATTTGAAATGATACAGCAAAACGCAACATATTCTTCAATCTTAA

mRNA sequence

ATGGAATCCTATTGGCTTCAATATTATATCAGATCTGGATGTAATCTGGCACAATGGTCAATCACATCTTCAACAGTGTTCCTTGGAACACAAGCCCTATCTTGTGCCATTGGTTTGGAGTTCGCTCACTGACTGTTGGAGCCCAGCAGACTGTTGGGACAGAGTGTTGATGAAGTTGTATGGTTCGGATCGAGATACCGTTGCCATCCTTTTATGGGATGTCTAGATTTACAGGAACTTTTTACTGCATGCAATGTTTTGGTTGGCAAGATCTCTTTGCATATGGAGGAGTTTTGTGGGGGTAGTAGCGTTGATCGGTTGTTCTTTAGGAGGGAGATTCTGAGGAGTCAGGAGGTGTGGGTGTCGCCTGAATCGGGGTTTTGGAAGATCAACACCGATGCCTCGTGGTTTGAGCTTGAAGGGGTGGGTGGTATTAGTTGGGTGGTTCGTGACTCGTTTGGCTCTCTTATCCTAGCTGGGTGTGAGAAAGTGGTCCTCTTTTGGCCCATTAAGTTCCTTGACGCCTTGGCGTTGATTAGGGGTCTGAAAGCTCTCGTTGACTATTTTGCTCATGGATCCCTTTTCGATGTTTTGGTGGAGTCTGATTGTGTGAATCTTATCAATGCCATTAACCATAAGATTCAAGACTTGTCGAAGTTGTCGAGTTTTGTTGAGGAGATGGGGACTTTGGCCGTTTCTGCTCATGTGGTTTTCTTTTGTTGGTGTATGCGGTCTGCGAATGGATTGGTGCATCGTTTGGCTCGTGCTGCAGTGTTGAGTGGTGATTGGATGAGCAAAACGCAACATATTCTTCAATCTTAA

Coding sequence (CDS)

ATGGGATGTCTAGATTTACAGGAACTTTTTACTGCATGCAATGTTTTGGTTGGCAAGATCTCTTTGCATATGGAGGAGTTTTGTGGGGGTAGTAGCGTTGATCGGTTGTTCTTTAGGAGGGAGATTCTGAGGAGTCAGGAGGTGTGGGTGTCGCCTGAATCGGGGTTTTGGAAGATCAACACCGATGCCTCGTGGTTTGAGCTTGAAGGGGTGGGTGGTATTAGTTGGGTGGTTCGTGACTCGTTTGGCTCTCTTATCCTAGCTGGGTGTGAGAAAGTGGTCCTCTTTTGGCCCATTAAGTTCCTTGACGCCTTGGCGTTGATTAGGGGTCTGAAAGCTCTCGTTGACTATTTTGCTCATGGATCCCTTTTCGATGTTTTGGTGGAGTCTGATTGTGTGAATCTTATCAATGCCATTAACCATAAGATTCAAGACTTGTCGAAGTTGTCGAGTTTTGTTGAGGAGATGGGGACTTTGGCCGTTTCTGCTCATGTGGTTTTCTTTTGTTGGTGTATGCGGTCTGCGAATGGATTGGTGCATCGTTTGGCTCGTGCTGCAGTGTTGAGTGGTGATTGGATGAGCAAAACGCAACATATTCTTCAATCTTAA

Protein sequence

MGCLDLQELFTACNVLVGKISLHMEEFCGGSSVDRLFFRREILRSQEVWVSPESGFWKINTDASWFELEGVGGISWVVRDSFGSLILAGCEKVVLFWPIKFLDALALIRGLKALVDYFAHGSLFDVLVESDCVNLINAINHKIQDLSKLSSFVEEMGTLAVSAHVVFFCWCMRSANGLVHRLARAAVLSGDWMSKTQHILQS

Homology

[Close]

BLAST of CmUC11G210160 vs. NCBI nr
Match: KAA0038679.1 (hypothetical protein E6C27_scaffold92G002210 [Cucumis melo var. makuwa] >TYK31290.1 hypothetical protein E5676_scaffold455G005870 [Cucumis melo var. makuwa])

HSP 1 Score: 98.6 bits (244), Expect = 6.6e-17
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 0


Query: 41  EILRSQEVWVSPESGFWKINTDASWFELEGVGGISWVVRDSFGSLILAGCEKVVLFWPIK 100
           E  RSQ++W+SP  GFW+ N DASW ++E + G SWVVRDS G+ ILA CE+  + WP++
Sbjct: 4   ESTRSQKIWMSPYVGFWRFNLDASWNDVEEISGTSWVVRDSAGAFILASCERAEVKWPME 63

Query: 101 FLDALALIRGLKALVDYFAHGSLFDVLV 129
            L+ALA  RGL    DYF H    DVL+
Sbjct: 64  VLEALATNRGLIVYSDYFGHE---DVLI 88

[Close]

BLAST of CmUC11G210160 vs. NCBI nr
Match: KAA0043266.1 (transforming growth factor-beta receptor-associated protein 1 isoform X1 [Cucumis melo var. makuwa] >TYK29330.1 transforming growth factor-beta receptor-associated protein 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-12
Identity = 57/155 (36.77%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 14  NVLVGKISLHMEEFCGGSSVDRLFFRREILRSQEVWVSPESGFWKINTDASWFELEGVGG 73
           NVL+ +  +  EEF   +SV     RRE   S   W  P  G WK+N DA W +    GG
Sbjct: 20  NVLLHRAWVRSEEFGLLASVCSPLVRRESPSSHSCWSLPIVGVWKLNFDAYWVDSPSCGG 79

Query: 74  ISWVVRDSFGSLILAGCEKVVLFWPIKFLDALALIRGLKALVDYFAHGSLFDVLVESDCV 133
           I W+V DS GS IL GCEK             ++I+G     D   H     V++E  C 
Sbjct: 80  IGWLVCDSVGSPILVGCEK-------------SVIKG-----DLPLH-----VIIEFGCS 139

Query: 134 NLINAINHKIQDLSKLSSFVEEMGTLAVSAHVVFF 169
           +LI A   +  DLS+L+  V+E+ +LAVS  V+ +
Sbjct: 140 DLIFACRGQNSDLSELAGLVDEIVSLAVSTRVMCY 151

[Close]

BLAST of CmUC11G210160 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])

HSP 1 Score: 83.6 bits (205), Expect = 2.2e-12
Identity = 51/147 (34.69%), Postives = 77/147 (52.38%), Query Frame = 0


Query: 43  LRSQEVWVSPESGFWKINTDASWFELEGVGGISWVVRDSFGSLILAGCEKVVLFWPIKFL 102
           L ++  W  P    W +N DASW +    GGI W++R   G ++LAG   V     +K L
Sbjct: 65  LNNKLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLL 124

Query: 103 DALALIRGLKALVDYFAHGSLFDVLVESDCVNLINAINHKIQDLSKLSSFVEEMGTLAVS 162
           +A A++ GL+ L +    G L  + +E+D   + + +N K +DL+K    VEE+  L  S
Sbjct: 125 EASAILEGLRNLTNL---GVLRPLHIETDSAEVESLLNRKREDLTKTGWVVEEILNLRDS 184

Query: 163 AHVVFFCWCMRSANGLVHRLA-RAAVL 189
             ++ F    R  NG  H LA RA+VL
Sbjct: 185 CEILAFAKVGRETNGCAHSLAQRASVL 208

[Close]

BLAST of CmUC11G210160 vs. NCBI nr
Match: XP_023882817.1 (uncharacterized protein LOC111995143 [Quercus suber])

HSP 1 Score: 80.1 bits (196), Expect = 2.4e-11
Identity = 51/143 (35.66%), Postives = 73/143 (51.05%), Query Frame = 0


Query: 49  WVSPESGFWKINTDASWFELEGVGGISWVVRDSFGSLILAGCEKVVLFWPIKFLDALALI 108
           W  P +G +K N DA+ FE    GGI  V+RD  G +I A  +K++L   ++  +ALA  
Sbjct: 137 WAPPPAGMYKANFDAALFEERNFGGIGVVIRDCMGEIIGALSQKILLPQSVEHAEALAAS 196

Query: 109 RGLKALVDYFAHGSLFDVLVESDCVNLINAINHKIQDLSKLSSFVEEMGTLAVSAHVVFF 168
           R ++   +      LFDV+ E D + +INAIN      +     VEE+   ++S     F
Sbjct: 197 RAVQLATEL----CLFDVIFEGDSLCVINAINSAEACRAMFGHIVEEVRGRSLSLARCQF 256

Query: 169 CWCMRSANGLVHRLARAAVLSGD 192
               R  N L H LAR AVL+ D
Sbjct: 257 KHIRREGNSLAHALARRAVLTAD 275

[Close]

BLAST of CmUC11G210160 vs. NCBI nr
Match: XP_030945898.1 (uncharacterized protein LOC115970400 [Quercus lobata])

HSP 1 Score: 79.3 bits (194), Expect = 4.1e-11
Identity = 51/153 (33.33%), Postives = 75/153 (49.02%), Query Frame = 0


Query: 39  RREILRSQEVWVSPESGFWKINTDASWFELEGVGGISWVVRDSFGSLILAGCEKVVLFWP 98
           + +I+     W  P    +K N DA+ FE  G+ G+  V+RDS G +I A  EK+ L   
Sbjct: 7   KSDIIPPPVKWKPPLEPVYKANFDAAMFEQLGLAGLGVVLRDSGGHIIAALSEKIKLPQT 66

Query: 99  IKFLDALALIRGLKALVDYFAHGSLFDVLVESDCVNLINAINHKIQDLSKLSSFVEEMGT 158
           ++  +ALA  R +    ++    S+F V+VE DC+ +I A+N +   L+      EE   
Sbjct: 67  VELAEALAARRAVLFATEF----SIFKVMVEGDCLRVIQALNEQGSCLTMFGHVAEETRR 126

Query: 159 LAVSAHVVFFCWCMRSANGLVHRLARAAVLSGD 192
           L     +  F    R  N L H LAR AVL  D
Sbjct: 127 LGSCLELCSFHHVKREGNKLAHSLARRAVLPAD 155

[Close]

BLAST of CmUC11G210160 vs. ExPASy TrEMBL
Match: A0A5D3E6P6 (RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005870 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.2e-17
Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 0


Query: 41  EILRSQEVWVSPESGFWKINTDASWFELEGVGGISWVVRDSFGSLILAGCEKVVLFWPIK 100
           E  RSQ++W+SP  GFW+ N DASW ++E + G SWVVRDS G+ ILA CE+  + WP++
Sbjct: 4   ESTRSQKIWMSPYVGFWRFNLDASWNDVEEISGTSWVVRDSAGAFILASCERAEVKWPME 63

Query: 101 FLDALALIRGLKALVDYFAHGSLFDVLV 129
            L+ALA  RGL    DYF H    DVL+
Sbjct: 64  VLEALATNRGLIVYSDYFGHE---DVLI 88

[Close]

BLAST of CmUC11G210160 vs. ExPASy TrEMBL
Match: A0A7N2N656 (RNase H domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 3.6e-13
Identity = 55/153 (35.95%), Postives = 79/153 (51.63%), Query Frame = 0


Query: 39  RREILRSQEVWVSPESGFWKINTDASWFELEGVGGISWVVRDSFGSLILAGCEKVVLFWP 98
           +++I+     W  P    +K N DA+ FE  G+ G+  V+RDS G++I A  EK+ L   
Sbjct: 2   KQDIIYPPVKWTPPPKPVYKANFDAALFEHVGLAGLGVVLRDSGGNVIAALSEKIKLPQT 61

Query: 99  IKFLDALALIRGLKALVDYFAHGSLFDVLVESDCVNLINAINHKIQDLSKLSSFVEEMGT 158
           ++  +ALA  R     V + A  S+F V+VE DC+ +I A+N +   L+     VEE   
Sbjct: 62  VELAEALAARRA----VIFAAELSIFKVMVEGDCLRVIQALNGQGSCLTMFGHVVEETRR 121

Query: 159 LAVSAHVVFFCWCMRSANGLVHRLARAAVLSGD 192
           L     +  F    R  N L H LAR AVLS D
Sbjct: 122 LGSCLELCSFHHVKREGNKLAHSLARRAVLSAD 150

[Close]

BLAST of CmUC11G210160 vs. ExPASy TrEMBL
Match: A0A5D3E1D7 (Transforming growth factor-beta receptor-associated protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00380 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 6.2e-13
Identity = 57/155 (36.77%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 14  NVLVGKISLHMEEFCGGSSVDRLFFRREILRSQEVWVSPESGFWKINTDASWFELEGVGG 73
           NVL+ +  +  EEF   +SV     RRE   S   W  P  G WK+N DA W +    GG
Sbjct: 20  NVLLHRAWVRSEEFGLLASVCSPLVRRESPSSHSCWSLPIVGVWKLNFDAYWVDSPSCGG 79

Query: 74  ISWVVRDSFGSLILAGCEKVVLFWPIKFLDALALIRGLKALVDYFAHGSLFDVLVESDCV 133
           I W+V DS GS IL GCEK             ++I+G     D   H     V++E  C 
Sbjct: 80  IGWLVCDSVGSPILVGCEK-------------SVIKG-----DLPLH-----VIIEFGCS 139

Query: 134 NLINAINHKIQDLSKLSSFVEEMGTLAVSAHVVFF 169
           +LI A   +  DLS+L+  V+E+ +LAVS  V+ +
Sbjct: 140 DLIFACRGQNSDLSELAGLVDEIVSLAVSTRVMCY 151

[Close]

BLAST of CmUC11G210160 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.1e-12
Identity = 51/147 (34.69%), Postives = 77/147 (52.38%), Query Frame = 0


Query: 43  LRSQEVWVSPESGFWKINTDASWFELEGVGGISWVVRDSFGSLILAGCEKVVLFWPIKFL 102
           L ++  W  P    W +N DASW +    GGI W++R   G ++LAG   V     +K L
Sbjct: 65  LNNKLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLL 124

Query: 103 DALALIRGLKALVDYFAHGSLFDVLVESDCVNLINAINHKIQDLSKLSSFVEEMGTLAVS 162
           +A A++ GL+ L +    G L  + +E+D   + + +N K +DL+K    VEE+  L  S
Sbjct: 125 EASAILEGLRNLTNL---GVLRPLHIETDSAEVESLLNRKREDLTKTGWVVEEILNLRDS 184

Query: 163 AHVVFFCWCMRSANGLVHRLA-RAAVL 189
             ++ F    R  NG  H LA RA+VL
Sbjct: 185 CEILAFAKVGRETNGCAHSLAQRASVL 208

[Close]

BLAST of CmUC11G210160 vs. ExPASy TrEMBL
Match: A0A7N2L9Q3 (RNase H domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.4e-12
Identity = 61/180 (33.89%), Postives = 86/180 (47.78%), Query Frame = 0


Query: 12  ACNVLVGKISLHMEEFCGGSSVDRLFFRREILRSQEVWVSPESGFWKINTDASWFELEGV 71
           ACN+        +EEF    +  R   + +I+     W  P    +K N DA+ FE  G+
Sbjct: 22  ACNL--------VEEFFEAQNRTR---KPDIIPPPVKWKPPPEPVYKANFDAALFEQLGL 81

Query: 72  GGISWVVRDSFGSLILAGCEKVVLFWPIKFLDALALIRGLKALVDYFAHGSLFDVLVESD 131
            G+  V+RDS G +I A  EK+ L   ++  +ALA  R     V +    S+F V+VE D
Sbjct: 82  AGLGVVLRDSGGHIIAALSEKIKLPQTVELAEALAARRA----VLFATELSIFKVMVEGD 141

Query: 132 CVNLINAINHKIQDLSKLSSFVEEMGTLAVSAHVVFFCWCMRSANGLVHRLARAAVLSGD 191
           C+ +I A+N +   L+     VEE   L     +  F    R  N L H LAR AVLS D
Sbjct: 142 CLRVIQALNEQGSCLTMFGHVVEETRRLGSCLELCSFHHVKREGNKLAHSLARRAVLSAD 186

[Close]

BLAST of CmUC11G210160 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 2.3e-04
Identity = 38/139 (27.34%), Postives = 60/139 (43.17%), Query Frame = 0


Query: 49  WVSPESGFWKINTDASWFELEGVGGISWVVRDSFGSLILAGCEKVVLFWPIKFLDALALI 108
           W  P     K N DAS  E   V G+ W++R+S G++I  G  K       +  +   LI
Sbjct: 105 WSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTLI 164

Query: 109 RGLKALVDYFAHGSLFDVLVESDCVNLINAINHKIQDLSKLSSFVEEMGTLAVSAHVVFF 168
             ++A    F H     V+ E D   +   IN K  +  +L  F++ + +   S   + F
Sbjct: 165 WAIQASYG-FGHKK---VIFEGDNQTITRMINTKSSN-PRLQHFLDTIQSWIPSFESIEF 224

Query: 169 CWCMRSANGLVHRLARAAV 188
            +  R  NG    LA+ A+
Sbjct: 225 SFKHREQNGCADFLAKQAI 238

The following BLAST results are available for this feature:

BLAST of CmUC11G210160 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038679.1	6.6e-17	52.27	hypothetical protein E6C27_scaffold92G002210 [Cucumis melo var. makuwa] >TYK3129...	[more]
KAA0043266.1	1.3e-12	36.77	transforming growth factor-beta receptor-associated protein 1 isoform X1 [Cucumi...	[more]
XP_022155262.1	2.2e-12	34.69	uncharacterized protein LOC111022403 [Momordica charantia]	[more]
XP_023882817.1	2.4e-11	35.66	uncharacterized protein LOC111995143 [Quercus suber]	[more]
XP_030945898.1	4.1e-11	33.33	uncharacterized protein LOC115970400 [Quercus lobata]	[more]

BLAST of CmUC11G210160 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC11G210160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E6P6	3.2e-17	52.27	RNase H domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A7N2N656	3.6e-13	35.95	RNase H domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A5D3E1D7	6.2e-13	36.77	Transforming growth factor-beta receptor-associated protein 1 isoform X1 OS=Cucu...	[more]
A0A6J1DNV9	1.1e-12	34.69	uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A7N2L9Q3	1.4e-12	33.89	RNase H domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of CmUC11G210160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65005.1	2.3e-04	27.34	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 57..190 e-value: 5.3E-8 score: 34.9
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 60..186 e-value: 1.6E-14 score: 53.7
None	No IPR available	PANTHER	PTHR33033:SF67	SUBFAMILY NOT NAMED	coord: 45..196
None	No IPR available	PANTHER	PTHR33033	POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 45..196
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 59..184 e-value: 9.3202E-13 score: 60.4056
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 56..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC11G210160.1	CmUC11G210160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity