CmUC11G209540 (gene) Watermelon (USVL531) v1

Overview
NameCmUC11G209540
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr11: 6004193 .. 6004450 (-)
RNA-Seq ExpressionCmUC11G209540
SyntenyCmUC11G209540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAACCTCTTCAAAGCCTCGAAATCGTTCTTTGTTTTTGCTCTGATTCTTTTCATCTCTATTTCTTCTTCTTCGGCCAGATTGTTGCGTGACCAATCTCTTTCTGCCGCCGTGCCGGAGTTGAAACTTGATAATCCGGCGGATCCGGCGGCGGCTCTGTCGAGGGAATATGGGCCGCTGCTTCTTGGGTTTCTGCCAAAAGGGGGAATTCCGCCGTCGGGACCGAGCAAAGGGACCAACGACTTCAACACTTAG

mRNA sequence

ATGGCAAACCTCTTCAAAGCCTCGAAATCGTTCTTTGTTTTTGCTCTGATTCTTTTCATCTCTATTTCTTCTTCTTCGGCCAGATTGTTGCGTGACCAATCTCTTTCTGCCGCCGTGCCGGAGTTGAAACTTGATAATCCGGCGGATCCGGCGGCGGCTCTGTCGAGGGAATATGGGCCGCTGCTTCTTGGGTTTCTGCCAAAAGGGGGAATTCCGCCGTCGGGACCGAGCAAAGGGACCAACGACTTCAACACTTAG

Coding sequence (CDS)

ATGGCAAACCTCTTCAAAGCCTCGAAATCGTTCTTTGTTTTTGCTCTGATTCTTTTCATCTCTATTTCTTCTTCTTCGGCCAGATTGTTGCGTGACCAATCTCTTTCTGCCGCCGTGCCGGAGTTGAAACTTGATAATCCGGCGGATCCGGCGGCGGCTCTGTCGAGGGAATATGGGCCGCTGCTTCTTGGGTTTCTGCCAAAAGGGGGAATTCCGCCGTCGGGACCGAGCAAAGGGACCAACGACTTCAACACTTAG

Protein sequence

MANLFKASKSFFVFALILFISISSSSARLLRDQSLSAAVPELKLDNPADPAAALSREYGPLLLGFLPKGGIPPSGPSKGTNDFNT
Homology
BLAST of CmUC11G209540 vs. NCBI nr
Match: KAG6578478.1 (hypothetical protein SDJN03_22926, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 130.2 bits (326), Expect = 8.6e-27
Identity = 72/85 (84.71%), Postives = 74/85 (87.06%), Query Frame = 0

Query: 1  MANLFKASKSFFVFALILFISISSSSARLLRDQSLSAAVPELKLDNPADPAAALSREYGP 60
          MA LFK  K FFVFA+ILFIS SSSSARLLRDQSLSAAVPELKLD P    AALSREYGP
Sbjct: 1  MAKLFKVPKLFFVFAVILFISASSSSARLLRDQSLSAAVPELKLDIP----AALSREYGP 60

Query: 61 LLLGFLPKGGIPPSGPSKGTNDFNT 86
          L+LGFLPKG IPPSGPSKGTNDFNT
Sbjct: 61 LILGFLPKGRIPPSGPSKGTNDFNT 81

BLAST of CmUC11G209540 vs. NCBI nr
Match: KAG6602588.1 (hypothetical protein SDJN03_07821, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 110.2 bits (274), Expect = 9.2e-21
Identity = 64/87 (73.56%), Postives = 71/87 (81.61%), Query Frame = 0

Query: 1  MANLFKASKSFFVFALILFISI-SSSSARLLRDQSLS-AAVPELKLDNPADPAAALSREY 60
          MANLFK SK   V ALIL +S+ SSSSARLLRD SLS AA+P+LKLD PAD   AL+ EY
Sbjct: 1  MANLFKLSKFISVLALILSLSVSSSSSARLLRDLSLSPAALPDLKLDTPADHTTALAVEY 60

Query: 61 GPLLLGFLPKGGIPPSGPSKGTNDFNT 86
          G LLLGFLPKGGIPPSGPSKGTN+ N+
Sbjct: 61 GALLLGFLPKGGIPPSGPSKGTNNLNS 87

BLAST of CmUC11G209540 vs. NCBI nr
Match: KGN45830.1 (hypothetical protein Csa_005505 [Cucumis sativus])

HSP 1 Score: 104.8 bits (260), Expect = 3.8e-19
Identity = 64/87 (73.56%), Postives = 67/87 (77.01%), Query Frame = 0

Query: 1  MANLF-KASKSFFVFALILFISISSSSARLLRDQSLSAAVPELKLDNPADPAAALSREYG 60
          MANLF K    FF+F LIL IS+SSSSARLLR QSLS   P LKLD PADPAA    EY 
Sbjct: 1  MANLFKKLPLFFFLFTLILLISVSSSSARLLRQQSLS---PALKLDIPADPAAPTMTEYE 60

Query: 61 PLLLGFLPKGG-IPPSGPSKGTNDFNT 86
           LLLGFLPKGG IPPSGPSKGTN+FNT
Sbjct: 61 SLLLGFLPKGGSIPPSGPSKGTNNFNT 84

BLAST of CmUC11G209540 vs. NCBI nr
Match: GFZ15095.1 (hypothetical protein Acr_24g0012850 [Actinidia rufa])

HSP 1 Score: 58.5 bits (140), Expect = 3.2e-05
Identity = 41/86 (47.67%), Postives = 48/86 (55.81%), Query Frame = 0

Query: 6  KASKSFFVFALILFISIS-SSSARLLRDQS--LSAAVPELKLDNPADPAAA----LSREY 65
          K S       L +F+ IS SSSARLL+D S       P +  D P + A A    L   Y
Sbjct: 3  KPSMLCLTATLFIFLIISQSSSARLLKDSSHPCKMGQPTMSFD-PMELAVAEPKRLRSRY 62

Query: 66 GPLLLGFLPKGGIPPSGPSKGTNDFN 85
          GPL L  LPKG +PPSGPSKGTN+ N
Sbjct: 63 GPLFLSMLPKGSVPPSGPSKGTNNMN 87

BLAST of CmUC11G209540 vs. NCBI nr
Match: KAG4392836.1 (hypothetical protein GLYMA_04G221450v4 [Glycine max])

HSP 1 Score: 57.4 bits (137), Expect = 7.0e-05
Identity = 32/77 (41.56%), Postives = 48/77 (62.34%), Query Frame = 0

Query: 8  SKSFFVFALILFISISSSSARLLRDQSLSAAVPELKLDNPADPAAALSREYGPLLLGFLP 67
          +K      L++F+ ++SS++    D + +A  P L L  P+D   A   +YGP++L  LP
Sbjct: 2  AKHLAAMLLLVFLLLTSSTS-TSADNNFAATEPSLNLALPSDRRVA-GGKYGPMILNMLP 61

Query: 68 KGGIPPSGPSKGTNDFN 85
          KG +PPSGPSKGTN+ N
Sbjct: 62 KGPVPPSGPSKGTNNLN 76

BLAST of CmUC11G209540 vs. ExPASy TrEMBL
Match: A0A0A0K7U2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014510 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.9e-19
Identity = 64/87 (73.56%), Postives = 67/87 (77.01%), Query Frame = 0

Query: 1  MANLF-KASKSFFVFALILFISISSSSARLLRDQSLSAAVPELKLDNPADPAAALSREYG 60
          MANLF K    FF+F LIL IS+SSSSARLLR QSLS   P LKLD PADPAA    EY 
Sbjct: 1  MANLFKKLPLFFFLFTLILLISVSSSSARLLRQQSLS---PALKLDIPADPAAPTMTEYE 60

Query: 61 PLLLGFLPKGG-IPPSGPSKGTNDFNT 86
           LLLGFLPKGG IPPSGPSKGTN+FNT
Sbjct: 61 SLLLGFLPKGGSIPPSGPSKGTNNFNT 84

BLAST of CmUC11G209540 vs. ExPASy TrEMBL
Match: A0A7J0GW62 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_24g0012850 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.5e-05
Identity = 41/86 (47.67%), Postives = 48/86 (55.81%), Query Frame = 0

Query: 6  KASKSFFVFALILFISIS-SSSARLLRDQS--LSAAVPELKLDNPADPAAA----LSREY 65
          K S       L +F+ IS SSSARLL+D S       P +  D P + A A    L   Y
Sbjct: 3  KPSMLCLTATLFIFLIISQSSSARLLKDSSHPCKMGQPTMSFD-PMELAVAEPKRLRSRY 62

Query: 66 GPLLLGFLPKGGIPPSGPSKGTNDFN 85
          GPL L  LPKG +PPSGPSKGTN+ N
Sbjct: 63 GPLFLSMLPKGSVPPSGPSKGTNNMN 87

BLAST of CmUC11G209540 vs. ExPASy TrEMBL
Match: A0A0B2R0P4 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_014686 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.9e-05
Identity = 38/101 (37.62%), Postives = 52/101 (51.49%), Query Frame = 0

Query: 16  LILFISISSSSARLLRDQ----SLSAAVPELKLDNPAD---------------------- 75
           L++F+ ++SSSAR L D+    SL+A  P L L  P+D                      
Sbjct: 11  LLVFLFLTSSSARPLNDENNYFSLAATEPSLNLALPSDRVVVPEEPAPRHVSGCGHTRVA 70

Query: 76  -----PAAALS-REYGPLLLGFLPKGGIPPSGPSKGTNDFN 85
                P   L+  +YGP++L  LPKG +PPSGPSKGTN+ N
Sbjct: 71  GMLALPGTRLAGGKYGPMILNMLPKGPVPPSGPSKGTNNLN 111

BLAST of CmUC11G209540 vs. ExPASy TrEMBL
Match: I1KB91 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_06G144000 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.9e-05
Identity = 38/101 (37.62%), Postives = 52/101 (51.49%), Query Frame = 0

Query: 16  LILFISISSSSARLLRDQ----SLSAAVPELKLDNPAD---------------------- 75
           L++F+ ++SSSAR L D+    SL+A  P L L  P+D                      
Sbjct: 11  LLVFLFLTSSSARPLNDENNYFSLAATEPSLNLALPSDRVVVPEEPAPRHVSGCGHTRVA 70

Query: 76  -----PAAALS-REYGPLLLGFLPKGGIPPSGPSKGTNDFN 85
                P   L+  +YGP++L  LPKG +PPSGPSKGTN+ N
Sbjct: 71  GMLALPGTRLAGGKYGPMILNMLPKGPVPPSGPSKGTNNLN 111

BLAST of CmUC11G209540 vs. ExPASy TrEMBL
Match: A0A151RAC1 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_039268 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.7e-04
Identity = 37/98 (37.76%), Postives = 48/98 (48.98%), Query Frame = 0

Query: 16  LILFISISSSSARLLRD-----QSLSAAVPELKLDNPADPAAALSRE------------- 75
           L+LF+ ++++S+ L R        L+A  P L L  P+D   A   E             
Sbjct: 14  LLLFLLLTTTSSSLARPFNTNYLGLAATEPTLNLALPSDRVVAPPEEDHPPPHVSPCGHL 73

Query: 76  -----------YGPLLLGFLPKGGIPPSGPSKGTNDFN 85
                      YGPL+L  LPKG +PPSGPSKGTNDFN
Sbjct: 74  RVAGKKLGGAKYGPLVLNMLPKGPVPPSGPSKGTNDFN 111

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6578478.18.6e-2784.71hypothetical protein SDJN03_22926, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6602588.19.2e-2173.56hypothetical protein SDJN03_07821, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN45830.13.8e-1973.56hypothetical protein Csa_005505 [Cucumis sativus][more]
GFZ15095.13.2e-0547.67hypothetical protein Acr_24g0012850 [Actinidia rufa][more]
KAG4392836.17.0e-0541.56hypothetical protein GLYMA_04G221450v4 [Glycine max][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K7U21.9e-1973.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014510 PE=4 SV=1[more]
A0A7J0GW621.5e-0547.67Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_24g0012850 PE=4 SV=1[more]
A0A0B2R0P49.9e-0537.62Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_014686 PE=4 SV=1[more]
I1KB919.9e-0537.62Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_06G144000 PE=4 SV=1[more]
A0A151RAC11.7e-0437.76Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_039268 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC11G209540.1CmUC11G209540.1mRNA