CmUC11G207330 (gene) Watermelon (USVL531) v1

Overview
NameCmUC11G207330
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr11: 3747190 .. 3751479 (-)
RNA-Seq ExpressionCmUC11G207330
SyntenyCmUC11G207330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATTTGGTATCTCTTGTCCATATTCAATTAGGACATTGTACCAATGATATAACCATTTCTCTTACTGTAAAAGGGGATCTCGTTGATAATTTGATATCATGTTTCTTGTACCAAATACATTCTTTGTTCAAGCGTTCAGTTCAGCTAACCAATCTTGGTTGCTGAAATGGATAATGACTTGAACCAAACAACTAAGAGAGATGTGAAAATCTTTCTAAGTTGAGCAGATCCCTAATAGTTCTTAGATACTTAACCACCTGTCTTAAAGTGGCCATTGGAAAAGCACCAGCCACCAGCAAAACTATTTTCTCTAATACTATAAATAAAGACATCAAGTAAACAACAGATTCTCTAATGTCAGGGAATTTTGAGTTTAACAATAAATGTTCATCCCTCTCAAGATCGGATTATTCTTCATGAAAATGGTATCCATTCAATGAGAACATTTCTAATTTTCTGATTACTACAATCACTACAGTAGTGAACAAGGTTTGTGCCCGGATATATCCAAATAATGTTTCATGAAAATGGAAAAGAAAAACATGAAAAATTTAGATGAATTAAAATTCATGGAGGAGGGCAGTCCTTTTTTAGTAAGATAACGCGACTCTGTATTTCTATTTCCATGTTTACAGATTTGTAACTGTAAGTTGTGTAAATGATGTTCAGGTAGTAGGCAATGTGTCATCACCTTTCAGCTACCCGATCATTAACAGGTTGAAACTAACTATACATTGATTTCTACTCTTAACTATGGGAAAAAATGGAGGGAATATGACAAAATTGAGTGGAGGATTGTCTTTCTTCTCTCTTTCAGGCAGTTTGCAGCCTGGATGTGAGATTGATGAAGACATCTTCTCTGCAAGGAATTGTCAAACCTCCAGTTGGATGTTTAAATCCAAATTCTTCTTCTGCACTCTTTAGCAAAGCTGAAAAAGAAGGATGGTTCAAGTATGATAGTGGAACCACAAACCGCTTTCTTTCGACATCTCCCACATAGACTGCAATATGGCCTTTGGGAACACCACATTGGTTTCTAGAAGAAACAGTTTGCATTTTGAAAACTTGCTTGGCATTGAGGAGAAGTGAAGGTAGTCTGATTCCCATGTCTAATTTTGAAAGGCTTTCTGCTGGATGCAAGATCTAGAAGTTGGGAAGGGTAGTACTTGAATGAGGATGTGTATGAAATTTGATTTGAAGATTGAAGTTTATTTGATTTGTATTTATAAATACAGGAATACAGAAGTGGGTGGGAAGTAAACAGTGTCAAGTAGGTGTTTAAGAGGGCCTACTTAATGAATGCTCACATGGGTTGCTTTATTTGATTTGAATACAAGCACTTCCATGTGTGCCCTAACTACTGGTGAACAGTCCCACTCGTTTCAATTAGGTAAAGTTATCGTCCGAATAAGAGATCAAGATAGCTTCAAAACCAAACGCCATGTCAAAGCCCAACCGATGACAGACCCATGTGACAAGGTTTCATCACTGGTCATGTCCTGCCTCTCTAGTCTAATGCAGAGATAAAATATATACCAGTTGATACTAAAACTGAAATAAAGTCATCTTGATAATGACCAGTCAAATATTAAATGAAATGCCAGTCCACTTGTAAACCATTCTTCCGGGCATATTGAAAATACTTGTCTCAAGTATGCTATAATCTTAGAGTATCATTCAGGATTGTTTAATATCTGTTAGCCTGTCTATAATAAGAGGTATGCATAATGTTTCTCTGTAGGTCTGACTTATCTATTTTCATCAGCCATCGTGTCAGTTCTCTCCACTCATTTCCTTGTCCTGATGTGTTATGTTAATTGCATCTCATGTTGATATTATATAAAGAGGCATCGAGAGATCGGATTTACAAGCTGCATAGTTTCTCTTCTACTCTTCATTTCTTGAGAATTCACGTCTGTTTTCTCGTCTTTTTTCCTTGTGATACTATATAAAGTCTATGGAAGGGAGCAAGAGCTTATTTGGTCTCTCCAGAAGGAATTTGACCGATAAATAGAATGAATTGGAAAATCAAATAGCAGCAATCTCAGACTTTCAACTGAGGATCAACAGAGTCGAAAGATGTTGCACTCTTGTGCCATGGATTTAGATTGATCATGTCAGGGGTGTCCGCATTCCATAGCTAGAATCATTATTTGGGTTAAAGTTATTAACTGTTGGTTAGATTTGCTTGAAAACCGAGTAGCTACTTATGTTTCGTCTGAATTCTCTCAAATTGTTCAGAGCTGGCAAGTATTCAAAGTTGAGGGGGAAAGCTGAAGAATTGTATATGAGATAGGTAGACATTCTTATGTTGAAAAAGAAGCTGAGGTAGGAACAAGTTTTCCTGGTTGTCAAATAGTTCCCATTTGCTGCTCCTGATGATCAGTTTGGAAATGGTGTTTACTTTGTTTTGTTGTCTTCATTACAAGAGCTCGACTTTAAACACTCCAATGACCAAAGATCAGACTGAATCAAGGTAAATGATTAAGGGGATTGTGCATTATACAGAGGAGAATATCAATGTTGAAAATGAAGCCAGAAGGAGCATAAATAATTTCTTAAGGTAGTTTTGACCAATAGATCATACATTTCACAAAGATGTGCATTTTGAAGTAAGAAGATTTAAGAGCAAACTACTTTATGGCATAAGAGAATTGGTGGAGTTGCAGTTTGTTATCTCATAAACTTTTGTCCATCCTTATTCATAGACTTGAAAACCTTTCAAGAGAAGTGGACTGGTGTTAACTTTAGATATGTGACGAGGACATTTGGATGTCCCATGTTCAAACAAAGCAAGATAAATTTGAGCATAAAAAGTGTACTTTCCCGGGAATCCGGATGGTGTCAATGACTAGCTTTGATCGTTTAACAAATGCAAGTTAAGTCCTGTTTGGAATGACTAATCAGGTGCTTAAAAACACTTTTTTTCACCAAAAAAGCACTCTTTTGAAGCGCTTGAAACATCATTCCAAACATGCTCTTAATGTGTTGTGTTAGTAGTTGTGTTTTCCTTATGAAAATCAAATGCCACACTCTGATGAAGTTTATGGAGTTTTTTAGCATTGAAGTTTTTGTGATGGATATTATGTTGGTTTTGGCAAATTAACGTGATTTGTTAGCAATGCGATAGATGGATTCTTTTAAGCTGAACACCATGGTGCATCAATTCTAAATCACATGGGCATATTGATCTTTCACTATTGAAATACTCACTCTGAATTAACCAAGGAGCTGAATGCATAAACATTCTTTTGAAGTGGTATATCTTTTCCCAACACATATTGGACACTTTTTGATACTTATTATACATGTTTTGGACACATGAACTTGAATAGTATTCATTAAAAAAATACATAGAAATATGATTGACATAAAAAGAAAGAGGAAAATGATAACGTTTGACGGCAAAAACTATATCTTATTAAATTATAAGAACGTAAATTGTTGAAGTGCCTTGAATCTGTTATATAGCGCTTCAAATGACCGCTTCAAATGACCAAATACGGGGTGAAGTTCCCTAGTGGGGGTTCGGGGTCAACACCCTCGAAACTTAAGTTGTATTCACACTTATTCTATTTCATTATTTACGATTTTAGCTCTAGGATAGGAGTGCCCTACATAAACTCTCTAACCCTAGAGGTGCCTCTTGATCTGTAATATGAATTTTTCTCTCTAATAATAAAAATGTTATCTCTCTTTGTCCTTGGACGTAGCTAATACATTATTAGTGAACCACGTAAATCTTTGTGTCGATTCTCTATTATTTACGTTTTCTATTTACTTTGATTGTTCGATTTATTAGCATAAATCAATTTTCATTTTTCATAAATTTTGAATCAATTTGAAGAATTTTTATTTGATCTGAAGTTTTCTCCGAATCGATTTTCTTTAAAGCACTGTATGACAAAAACATGCATATTTTCTCTTCAACTTCAAGAATCAACATTTCTATTTCCAATGGAATGGACTTTCGTCTTGAAGTATCTATGACTTGACTGGTAATTTGTGTTATAAAATACAGAGAAAATAGAGTGGGAGAAGAAAATTGGTGGCCCTTTCATGAGTTGGGGAAAGCCATGTGAACTGTATACTCAAATATACCCAACCACCAGACTTCATACCTCACTTAGTCACTTGAAAGGCCACAATCACCAGCATAGCACTTCCTTCAGAAACTCTATAAATATAAACATCAAAATGAGCCTTCAAACAGCAAATTCAACTCATTTTAGCTATAAATATAAACATCAAAATGAGCCTTCAAACAGCAAATTCAACTCATTTTAA

mRNA sequence

ATGCATTTGGTATCTCTTGTCCATATTCAATTAGGACATTGTACCAATGATATAACCATTTCTCTTACTGTAAAAGGGGATCTCGTTGATAATTTGATATCATGTTTCTTATCCCTAATAGTTCTTAGATACTTAACCACCTGTCTTAAAGTGGCCATTGGAAAAGCACCAGCCACCAGCAAAACTATTTTCTCTAATACTATAAATAAAGACATCAAATTTGTAACTGTAAGTTGTGTAAATGATGTTCAGGTAGCAGTTTGCAGCCTGGATGTGAGATTGATGAAGACATCTTCTCTGCAAGGAATTGTCAAACCTCCAGTTGGATGTTTAAATCCAAATTCTTCTTCTGCACTCTTTAGCAAAGCTGAAAAAGAAGGATGGTTCAAGTATGATAGAATACAGAAGTGGGTGGGAAGTAAACAGTGTCAAGTAGGTAAAGTTATCGTCCGAATAAGAGATCAAGATAGCTTCAAAACCAAACGCCATGTCAAAGCCCAACCGATGACAGACCCATGTGACAAGGTTTCATCACTGGTCATGTCTGACTTATCTATTTTCATCAGCCATCGTGTCAGTTCTCTCCACTCATTTCCTTGTCCTGATGTGTTATCTAGAATCATTATTTGGGTTAAAGTTATTAACTGTTGGTTAGATTTGCTTGAAAACCGAGTAGCTACTTATGTTTCGTCTGAATTCTCTCAAATTGTTCAGAGCTGGCAATTCCCATTTGCTGCTCCTGATGATCAGTTTGGAAATGACTTGAAAACCTTTCAAGAGAAGTGGACTGGTGTTAACTTTAGATATGTGACGAGGACATTTGGATGTCCCATGTTCAAACAAAGCAAGATAAATTTGAGCATAAAAAAGAAAATAGAGTGGGAGAAGAAAATTGGTGGCCCTTTCATGAGTTGGGGAAAGCCATGTGAACTGTATACTCAAATATACCCAACCACCAGACTTCATACCTCACTTAGTCACTTGAAAGGCCACAATCACCAGCATAGCACTTCCTTCAGAAACTCTATAAATATAAACATCAAAATGAGCCTTCAAACAGCAAATTCAACTCATTTTAGCTATAAATATAAACATCAAAATGAGCCTTCAAACAGCAAATTCAACTCATTTTAA

Coding sequence (CDS)

ATGCATTTGGTATCTCTTGTCCATATTCAATTAGGACATTGTACCAATGATATAACCATTTCTCTTACTGTAAAAGGGGATCTCGTTGATAATTTGATATCATGTTTCTTATCCCTAATAGTTCTTAGATACTTAACCACCTGTCTTAAAGTGGCCATTGGAAAAGCACCAGCCACCAGCAAAACTATTTTCTCTAATACTATAAATAAAGACATCAAATTTGTAACTGTAAGTTGTGTAAATGATGTTCAGGTAGCAGTTTGCAGCCTGGATGTGAGATTGATGAAGACATCTTCTCTGCAAGGAATTGTCAAACCTCCAGTTGGATGTTTAAATCCAAATTCTTCTTCTGCACTCTTTAGCAAAGCTGAAAAAGAAGGATGGTTCAAGTATGATAGAATACAGAAGTGGGTGGGAAGTAAACAGTGTCAAGTAGGTAAAGTTATCGTCCGAATAAGAGATCAAGATAGCTTCAAAACCAAACGCCATGTCAAAGCCCAACCGATGACAGACCCATGTGACAAGGTTTCATCACTGGTCATGTCTGACTTATCTATTTTCATCAGCCATCGTGTCAGTTCTCTCCACTCATTTCCTTGTCCTGATGTGTTATCTAGAATCATTATTTGGGTTAAAGTTATTAACTGTTGGTTAGATTTGCTTGAAAACCGAGTAGCTACTTATGTTTCGTCTGAATTCTCTCAAATTGTTCAGAGCTGGCAATTCCCATTTGCTGCTCCTGATGATCAGTTTGGAAATGACTTGAAAACCTTTCAAGAGAAGTGGACTGGTGTTAACTTTAGATATGTGACGAGGACATTTGGATGTCCCATGTTCAAACAAAGCAAGATAAATTTGAGCATAAAAAAGAAAATAGAGTGGGAGAAGAAAATTGGTGGCCCTTTCATGAGTTGGGGAAAGCCATGTGAACTGTATACTCAAATATACCCAACCACCAGACTTCATACCTCACTTAGTCACTTGAAAGGCCACAATCACCAGCATAGCACTTCCTTCAGAAACTCTATAAATATAAACATCAAAATGAGCCTTCAAACAGCAAATTCAACTCATTTTAGCTATAAATATAAACATCAAAATGAGCCTTCAAACAGCAAATTCAACTCATTTTAA

Protein sequence

MHLVSLVHIQLGHCTNDITISLTVKGDLVDNLISCFLSLIVLRYLTTCLKVAIGKAPATSKTIFSNTINKDIKFVTVSCVNDVQVAVCSLDVRLMKTSSLQGIVKPPVGCLNPNSSSALFSKAEKEGWFKYDRIQKWVGSKQCQVGKVIVRIRDQDSFKTKRHVKAQPMTDPCDKVSSLVMSDLSIFISHRVSSLHSFPCPDVLSRIIIWVKVINCWLDLLENRVATYVSSEFSQIVQSWQFPFAAPDDQFGNDLKTFQEKWTGVNFRYVTRTFGCPMFKQSKINLSIKKKIEWEKKIGGPFMSWGKPCELYTQIYPTTRLHTSLSHLKGHNHQHSTSFRNSININIKMSLQTANSTHFSYKYKHQNEPSNSKFNSF
Homology
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BLAST of CmUC11G207330 vs. NCBI nr
Match: KAG6571061.1 (hypothetical protein SDJN03_29976, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 59.7 bits (143), Expect = 6.3e-05
Identity = 28/38 (73.68%), Postives = 30/38 (78.95%), Query Frame = 0 

Query: 95  MKTSSLQGIVKPPVGCLNPNSSSALFSKAEKEGWFKYD 133
           MK SSLQG+VKPPVG LNPNSSSAL SK   EGWF  +
Sbjct: 1   MKASSLQGMVKPPVGWLNPNSSSALLSKFTNEGWFNLE 38

The following BLAST results are available for this feature:
BLAST of CmUC11G207330 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6571061.16.3e-0573.68hypothetical protein SDJN03_29976, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CmUC11G207330 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC11G207330 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC11G207330 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC11G207330.1CmUC11G207330.1mRNA