CmUC11G206760 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC11G206760
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	thylakoid lumenal 16.5 kDa protein, chloroplastic
Location	CmU531Chr11: 3193722 .. 3196532 (-)
RNA-Seq Expression	CmUC11G206760
Synteny	CmUC11G206760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACATCCTTCCTATCAACAGCAAACACATTCCATTCTTCTACACCTTCTTCTTCTTCTTCCTCTTCTTCATCTCCATTGTTGAGATCAAGATTCGCTTGCCTTCATTGCCATAATAACGCTAAACGATTGGTAATCTGCAAGAGTAATAGCGACCCACCATCGCAAATTCCAGCTTTAACTAAGAGAAGACTTTCAATCTGCTTCATTTCCAGTTTCATTTTCCCTCTGGTGGGTCAAGGATTTTCTGATGCAAATGCTGCGATTCTCGAAGCTGATGATGATGAAGAGCTTCTGGAGAAGGTGAAGAAGGATAGAAAGAAGAGGCTCGAAAGACAAGGGATTATCAGCTCTGCCAATAAAGAAAAAGGTTTTGTATGCATTCTATCTGTTTGTTTTTTGTTCTCTGTGAAAATTCCAACTTGGAAATTTGATCCTAATACTGAATATGTTTTGGTTTGCTAATTGGGTTCTTTGTTTGAATTAACAAATGTGCTCATCTTAATTCCTTACAATAATTGCATTCCCTTTTTTCTTGCAACTTTAAGAATGAAAATGTGAGAGCACATAACACCGATCTTTCTCTATGGTGGTGATTATTAGCGTTGTTATATGGTAGAGGAAGACTTTGAGATGAAGTTGTTTGAAAGACCTCATGGAAAGTAAGGCAACGTGGAACCAATTACTTAGGTCCCATTTGTAACCATTTGGTTGGAAAATAAGACAATGTGGAACCAATTACTTAGGTCCCATTTGTAACCATTTGGTTGTTGAAAATCAAGTCGATAAACACCACTTCCACTTATAAGTTCCTGTGATAGTTCTCCACTTACCACTAATGTTGTTTTTAAGAAATGATGAATTGCTCGTTGAAAAATTGTGAGGAAACAAACATAATGTTAAAAAATATAAAACTAAAAGCGACGTGAATATTGAACGGAACATTATTGCTTTCTGTGTATATAGCATTTTAGTTGCAGGGAAAAGCTCATTCAACAATACATAAATGGACATGGAAAAGTAGAAATGTGTGAATATAAGAAAAAATATGGAGAAAAACAAGAAGAATAATCAATCTTTTAATGAACAAATGGAAAGATTTATCCAATTATAAAAAGAACTGAAACTAATTTAATCATACCCATGAATATCATTATTCTTATCATAACTTTAAGGGTATTTGACTCATTGGTTATATTTGTAACTTTGTATAGCCTGAGTTCTAAAGCCAAGCATATGTTTGTAATGTGGACTTCCTTATCTCCTGGCTATAGGTTTGCTAATCCTATGGGATACTTAAACCTAAGTTTTCCAAACTCACTCTTCAAGCCATGTAATTTACTTTTGCAAATCACAAACCCACAAGTCAAACATACCCATATCAAACTCAGGTTTCTACCACTCAAATCCTTCTTACAGTCTATACAAAATCAACCTTTTCAACCTCATTTGAAGCAAACCTACACTTGTTAAAACAGTTAATCAAACAATCCTTTATGAAGTTCAATATGGACTTGGTTTCTGAAATCATGGTGAGTGGACCACAAGTGTTGTGGCAGTCAATCATAGAGTTCATTATAAGCTATCCGACCTGAGCTATTAGAGAAGGCCTCTAAAACAAGCTGAAACCTTGCCATATTATCATTTGGTCTTTTGCAGGATATCTCCAGGAAGTTGTGTACAAGCTGAGCAAAGTAGGTCAAGCCATCGATAGTAATGACTTCTCAACAGCAAGTTCAGTTCTTGGGGGCAGTAGTAATGCAGATTGGGTTCGGAATGCCAATTTGGCCTTCAACAAGGTTAGCATAATATGTATAACAAAATCAGGACTGTTTATATTACTTTCAGGAAGTTTTCATATTTGGTTAGAATGCACATTGGTTCGCAAAGTACTAACGAGTTTGGTTAGTGCCAATTTTTTTTTTTTAAAAAAAATATATCACTTAGAACATGACAGGATGTGTTTTATTTGGTATAAAAATTTAAGCATCCGTACCTAGATATATGATGCCATGATTCTATATCACAACATGGAAAAGGCATGATTTTGTATGAATTTTTTACTACGATAAATTTGGTGAATATGATGTAAATGATCAAAATTTCATTGTAACAAATGTCTTGGTTTTTTTTTTCTTTTTTCTTTTTTTTTTTTTTTCCTCCTTAAGGCACATCAATCAAGCTCACATCCTACACTATTCATTTTTTCAAATGAAGTAGAAATAAGACCATCTAAAATAAAACAATTTGTTAGCCTAAGATGTAGTTCAATTTTTCGAACTTAGACAACTAAAATGAAAACATGCATGTAATTTAGGGACAAAATATATATTTTAGCCTTAATTAATTGAACCAGCTCATCTTTCAAGCTAGCAGCCCATTTTGATGTGATAAGATGAATGGTAAACTCAAAATGTTTGTCAGGTTAATGAGGAAAGTTAAATGATTCTTTGGGAAATTTCTGACTTTTGTGTAACTTCTTGAGCAGCTGAGCTCAAGTCCTGAAGAGAAATCTGAGGTGGACGCATTCAACTCCTCTCTAGCTTCATTAATTTCATCAGGTGGGTTATCTTATAATAAATTATGCAGTAGACAACAAAAAACAGAATGTAACATTTTGCTCAGAATAAAACTACTAAGAAATGAGAGATTTAACCCTCCACAGAGTTCTAAACAAGGGAACATTTTTGCATTGCAGTTACTCAGAATGATGTTGAATCCTCCAAAACTGCCTTTGTAGCATCTGCCAGTGCACTTGAGAAATGGACAGCCTTGGCAGGGCTTGTGGGACAGCTGAAGGGGCTTTGA

mRNA sequence

ATGGCAACATCCTTCCTATCAACAGCAAACACATTCCATTCTTCTACACCTTCTTCTTCTTCTTCCTCTTCTTCATCTCCATTGTTGAGATCAAGATTCGCTTGCCTTCATTGCCATAATAACGCTAAACGATTGGTAATCTGCAAGAGTAATAGCGACCCACCATCGCAAATTCCAGCTTTAACTAAGAGAAGACTTTCAATCTGCTTCATTTCCAGTTTCATTTTCCCTCTGGTGGGTCAAGGATTTTCTGATGCAAATGCTGCGATTCTCGAAGCTGATGATGATGAAGAGCTTCTGGAGAAGGTGAAGAAGGATAGAAAGAAGAGGCTCGAAAGACAAGGGATTATCAGCTCTGCCAATAAAGAAAAAGGATATCTCCAGGAAGTTGTGTACAAGCTGAGCAAAGTAGGTCAAGCCATCGATAGTAATGACTTCTCAACAGCAAGTTCAGTTCTTGGGGGCAGTAGTAATGCAGATTGGGTTCGGAATGCCAATTTGGCCTTCAACAAGCAGCTGAGCTCAAGTCCTGAAGAGAAATCTGAGGTGGACGCATTCAACTCCTCTCTAGCTTCATTAATTTCATCAGTTACTCAGAATGATGTTGAATCCTCCAAAACTGCCTTTGTAGCATCTGCCAGTGCACTTGAGAAATGGACAGCCTTGGCAGGGCTTGTGGGACAGCTGAAGGGGCTTTGA

Coding sequence (CDS)

ATGGCAACATCCTTCCTATCAACAGCAAACACATTCCATTCTTCTACACCTTCTTCTTCTTCTTCCTCTTCTTCATCTCCATTGTTGAGATCAAGATTCGCTTGCCTTCATTGCCATAATAACGCTAAACGATTGGTAATCTGCAAGAGTAATAGCGACCCACCATCGCAAATTCCAGCTTTAACTAAGAGAAGACTTTCAATCTGCTTCATTTCCAGTTTCATTTTCCCTCTGGTGGGTCAAGGATTTTCTGATGCAAATGCTGCGATTCTCGAAGCTGATGATGATGAAGAGCTTCTGGAGAAGGTGAAGAAGGATAGAAAGAAGAGGCTCGAAAGACAAGGGATTATCAGCTCTGCCAATAAAGAAAAAGGATATCTCCAGGAAGTTGTGTACAAGCTGAGCAAAGTAGGTCAAGCCATCGATAGTAATGACTTCTCAACAGCAAGTTCAGTTCTTGGGGGCAGTAGTAATGCAGATTGGGTTCGGAATGCCAATTTGGCCTTCAACAAGCAGCTGAGCTCAAGTCCTGAAGAGAAATCTGAGGTGGACGCATTCAACTCCTCTCTAGCTTCATTAATTTCATCAGTTACTCAGAATGATGTTGAATCCTCCAAAACTGCCTTTGTAGCATCTGCCAGTGCACTTGAGAAATGGACAGCCTTGGCAGGGCTTGTGGGACAGCTGAAGGGGCTTTGA

Protein sequence

MATSFLSTANTFHSSTPSSSSSSSSSPLLRSRFACLHCHNNAKRLVICKSNSDPPSQIPALTKRRLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGIISSANKEKGYLQEVVYKLSKVGQAIDSNDFSTASSVLGGSSNADWVRNANLAFNKQLSSSPEEKSEVDAFNSSLASLISSVTQNDVESSKTAFVASASALEKWTALAGLVGQLKGL

Homology

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BLAST of CmUC11G206760 vs. NCBI nr
Match: XP_038889145.1 (thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 394.8 bits (1013), Expect = 5.1e-106
Identity = 220/238 (92.44%), Postives = 225/238 (94.54%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTPSSSSSSSSS------PLLRSRFACLHCHNNAKRLVICKSNSDP 60
           MATSFLSTANTFHSSTPSSSSSSSSS      PLLRSRF CLHCHNN KRLVICK  +DP
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSSSSSSSPPLLRSRFGCLHCHNNTKRLVICKGINDP 60

Query: 61  PSQIPALTKRRLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQ 120
           PSQIPALTKR LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQ
Sbjct: 61  PSQIPALTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQ 120

Query: 121 GIISSANKEKGYLQEVVYKLSKVGQAIDSNDFSTASSVLGGSSNADWVRNANLAFNKQLS 180
           G+ISSANKEKGYLQEVVYKLSKVGQAID+NDFSTASSVLGGSS+ADWVRNANLAFNK LS
Sbjct: 121 GVISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSSDADWVRNANLAFNK-LS 180

Query: 181 SSPEEKSEVDAFNSSLASLISSVTQNDVESSKTAFVASASALEKWTALAGLVGQLKGL 233
           SSPEEKSEVDAFNSSLASLISSVTQNDVESSKTAFVASASALEKWTA+ GLVGQLKGL
Sbjct: 181 SSPEEKSEVDAFNSSLASLISSVTQNDVESSKTAFVASASALEKWTAMVGLVGQLKGL 237

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BLAST of CmUC11G206760 vs. NCBI nr
Match: KAG7030378.1 (Thylakoid lumenal 16.5 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 392.5 bits (1007), Expect = 2.5e-105
Identity = 218/236 (92.37%), Postives = 227/236 (96.19%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTP----SSSSSSSSSPLLRSRFACLHCHNNAKRLVICKSNSDPPS 60
           MATSFLSTANTFHSSTP    SSSSSSSSSPLLRSRF+CL+C NNA+RLVICK N+DPPS
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSSSSSSPLLRSRFSCLNCRNNARRLVICKGNNDPPS 60

Query: 61  QIPALTKRRLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGI 120
           QIP LTKR LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG+
Sbjct: 61  QIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV 120

Query: 121 ISSANKEKGYLQEVVYKLSKVGQAIDSNDFSTASSVLGGSSNADWVRNANLAFNKQLSSS 180
           ISSANKEKGYLQEVVYKLSKVGQAID+NDFSTASSVLGGS++ADWVRNANLAFNK LSSS
Sbjct: 121 ISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNK-LSSS 180

Query: 181 PEEKSEVDAFNSSLASLISSVTQNDVESSKTAFVASASALEKWTALAGLVGQLKGL 233
           PEEKSEVDAFNSSLASLISSVTQNDV+SSKTAFVASASALEKWTALAGLVGQLKGL
Sbjct: 181 PEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 235

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BLAST of CmUC11G206760 vs. NCBI nr
Match: XP_023545851.1 (thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545852.1 thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545854.1 thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 392.1 bits (1006), Expect = 3.3e-105
Identity = 217/233 (93.13%), Postives = 226/233 (97.00%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTPSSSSSSSSS-PLLRSRFACLHCHNNAKRLVICKSNSDPPSQIP 60
           MATSFLSTANTFHSSTPSSSSSSSSS PLLRSRF+CL+C NNA+RLVICK N+DPPSQIP
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSSPPLLRSRFSCLNCRNNARRLVICKGNNDPPSQIP 60

Query: 61  ALTKRRLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGIISS 120
            LTKR LSICFIS FIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG+ISS
Sbjct: 61  TLTKRSLSICFISGFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGVISS 120

Query: 121 ANKEKGYLQEVVYKLSKVGQAIDSNDFSTASSVLGGSSNADWVRNANLAFNKQLSSSPEE 180
           ANKEKGYLQEVVYKLSKVGQAID+NDFSTASSVLGGS++ADWVRNANLAFNK LSSSPEE
Sbjct: 121 ANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNK-LSSSPEE 180

Query: 181 KSEVDAFNSSLASLISSVTQNDVESSKTAFVASASALEKWTALAGLVGQLKGL 233
           KSEVDAFNSSLASLISSVTQNDV+SSKTAFVASASALEKWTALAGLVGQLKGL
Sbjct: 181 KSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 232

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BLAST of CmUC11G206760 vs. NCBI nr
Match: KAG6599393.1 (Thylakoid lumenal 16.5 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 392.1 bits (1006), Expect = 3.3e-105
Identity = 218/237 (91.98%), Postives = 227/237 (95.78%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTPSSSSSSSSS-----PLLRSRFACLHCHNNAKRLVICKSNSDPP 60
           MATSFLSTANTFHSSTPSSSSSSSSS     PLLRSRF+CL+C NNA+RLVICK N+DPP
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSSSSSSPPLLRSRFSCLNCRNNARRLVICKGNNDPP 60

Query: 61  SQIPALTKRRLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG 120
           SQIP LTKR LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG
Sbjct: 61  SQIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG 120

Query: 121 IISSANKEKGYLQEVVYKLSKVGQAIDSNDFSTASSVLGGSSNADWVRNANLAFNKQLSS 180
           +ISSANKEKGYLQEVVYKLSKVGQAID+NDFSTASSVLGGS++ADWVRNANLAFNK LSS
Sbjct: 121 VISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNK-LSS 180

Query: 181 SPEEKSEVDAFNSSLASLISSVTQNDVESSKTAFVASASALEKWTALAGLVGQLKGL 233
           SPEEKSEVDAFNSSLASLISSVTQNDV+SSKTAFVASASALEKWTALAGLVGQLKGL
Sbjct: 181 SPEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 236

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BLAST of CmUC11G206760 vs. NCBI nr
Match: XP_008457444.1 (PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic [Cucumis melo] >KAA0063500.1 thylakoid lumenal 16.5 kDa protein [Cucumis melo var. makuwa] >TYJ97826.1 thylakoid lumenal 16.5 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 386.3 bits (991), Expect = 1.8e-103
Identity = 214/235 (91.06%), Postives = 225/235 (95.74%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTPSSSSSS---SSSPLLRSRFACLHCHNNAKRLVICKSNSDPPSQ 60
           MATSFLSTANTFHSSTPSSSSSS   SS PLLRSRF CL+CHNN KRLVICKS+SDPPS+
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPSK 60

Query: 61  IPALTKRRLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGII 120
           IPALTKR LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLE+QG+I
Sbjct: 61  IPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGVI 120

Query: 121 SSANKEKGYLQEVVYKLSKVGQAIDSNDFSTASSVLGGSSNADWVRNANLAFNKQLSSSP 180
           SSANKEKGYLQE+VYKLSKVGQAID NDF+TASSVLGGSS+ADWV+NANLAFNK LSSSP
Sbjct: 121 SSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNK-LSSSP 180

Query: 181 EEKSEVDAFNSSLASLISSVTQNDVESSKTAFVASASALEKWTALAGLVGQLKGL 233
           EEKSEVDAFNSSLASLISSVT++DVESSKTAFVASASA EKWTALAGLVGQLKGL
Sbjct: 181 EEKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 234

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BLAST of CmUC11G206760 vs. ExPASy Swiss-Prot
Match: O22773 (Thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g02530 PE=1 SV=3)

HSP 1 Score: 194.5 bits (493), Expect = 1.3e-48
Identity = 132/238 (55.46%), Postives = 159/238 (66.81%), Query Frame = 0


Query: 1   MATSFL--STANTFHSSTPSSSSSSSSSPLLRSRFACLHCHNNAKRLVICKSNSDPPSQI 60
           MA S L  ST N F S+T SSS                      K  +    NS   +  
Sbjct: 1   MAKSLLCSSTLNPFFSTTLSSSK---------------------KNQIAYSGNSKNQTSS 60

Query: 61  PALTKRR-LSICFISSFI-FPLVG--QGFSDANAAILEADDDEELLEKVKKDRKKRLERQ 120
             L KRR LS+ F+SS +   LV   +   DANAAILEADDDEELLEKVK+DRKKR+ERQ
Sbjct: 61  SLLWKRRELSLGFMSSLVAIGLVSNDRRRHDANAAILEADDDEELLEKVKQDRKKRIERQ 120

Query: 121 GIISSANKEKGYLQEVVYKLSKVGQAIDSNDFSTASSVLGGSSNADWVRNANLAFNKQLS 180
            +++SA KEKGYLQ++VYKLSKVGQAI++ND   A  VLG   + +WV+  NLAF K LS
Sbjct: 121 AVLNSAVKEKGYLQDLVYKLSKVGQAIENNDLPAAGLVLGKGIDTEWVKTVNLAFTK-LS 180

Query: 181 SSPEEKSEVDAFNSSLASLISSVTQNDVESSKTAFVASASALEKWTALAGLVGQLKGL 233
           +SPEE +EV+AFNSSLASLI+SV +ND+ESSK AFV+SA A EKWT L GL+ QLKGL
Sbjct: 181 TSPEENTEVEAFNSSLASLITSVNKNDIESSKLAFVSSAGAFEKWTTLTGLLEQLKGL 216

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BLAST of CmUC11G206760 vs. ExPASy TrEMBL
Match: A0A5A7V8J2 (Thylakoid lumenal 16.5 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00360 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.7e-104
Identity = 214/235 (91.06%), Postives = 225/235 (95.74%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTPSSSSSS---SSSPLLRSRFACLHCHNNAKRLVICKSNSDPPSQ 60
           MATSFLSTANTFHSSTPSSSSSS   SS PLLRSRF CL+CHNN KRLVICKS+SDPPS+
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPSK 60

Query: 61  IPALTKRRLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGII 120
           IPALTKR LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLE+QG+I
Sbjct: 61  IPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGVI 120

Query: 121 SSANKEKGYLQEVVYKLSKVGQAIDSNDFSTASSVLGGSSNADWVRNANLAFNKQLSSSP 180
           SSANKEKGYLQE+VYKLSKVGQAID NDF+TASSVLGGSS+ADWV+NANLAFNK LSSSP
Sbjct: 121 SSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNK-LSSSP 180

Query: 181 EEKSEVDAFNSSLASLISSVTQNDVESSKTAFVASASALEKWTALAGLVGQLKGL 233
           EEKSEVDAFNSSLASLISSVT++DVESSKTAFVASASA EKWTALAGLVGQLKGL
Sbjct: 181 EEKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 234

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BLAST of CmUC11G206760 vs. ExPASy TrEMBL
Match: A0A1S3C541 (thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497128 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.7e-104
Identity = 214/235 (91.06%), Postives = 225/235 (95.74%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTPSSSSSS---SSSPLLRSRFACLHCHNNAKRLVICKSNSDPPSQ 60
           MATSFLSTANTFHSSTPSSSSSS   SS PLLRSRF CL+CHNN KRLVICKS+SDPPS+
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSYSSPPLLRSRFGCLYCHNNTKRLVICKSSSDPPSK 60

Query: 61  IPALTKRRLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGII 120
           IPALTKR LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLE+QG+I
Sbjct: 61  IPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEKQGVI 120

Query: 121 SSANKEKGYLQEVVYKLSKVGQAIDSNDFSTASSVLGGSSNADWVRNANLAFNKQLSSSP 180
           SSANKEKGYLQE+VYKLSKVGQAID NDF+TASSVLGGSS+ADWV+NANLAFNK LSSSP
Sbjct: 121 SSANKEKGYLQELVYKLSKVGQAIDDNDFTTASSVLGGSSDADWVQNANLAFNK-LSSSP 180

Query: 181 EEKSEVDAFNSSLASLISSVTQNDVESSKTAFVASASALEKWTALAGLVGQLKGL 233
           EEKSEVDAFNSSLASLISSVT++DVESSKTAFVASASA EKWTALAGLVGQLKGL
Sbjct: 181 EEKSEVDAFNSSLASLISSVTKSDVESSKTAFVASASAFEKWTALAGLVGQLKGL 234

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BLAST of CmUC11G206760 vs. ExPASy TrEMBL
Match: A0A6J1G2S1 (thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111450272 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.5e-103
Identity = 216/237 (91.14%), Postives = 225/237 (94.94%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTPSSSSSSSSS-----PLLRSRFACLHCHNNAKRLVICKSNSDPP 60
           MATSFLSTANTFHSSTPSSSSSSSSS     PLLRSRF+CL+  NNA+RLVICK N+DPP
Sbjct: 1   MATSFLSTANTFHSSTPSSSSSSSSSSSSSPPLLRSRFSCLNYRNNARRLVICKGNNDPP 60

Query: 61  SQIPALTKRRLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG 120
           SQIP LTKR LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG
Sbjct: 61  SQIPTLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG 120

Query: 121 IISSANKEKGYLQEVVYKLSKVGQAIDSNDFSTASSVLGGSSNADWVRNANLAFNKQLSS 180
           +ISSANKEKGYLQEVVYKLSKVGQAID+NDFSTASSVLGGS++ADWVRNANLAFNK LSS
Sbjct: 121 VISSANKEKGYLQEVVYKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNK-LSS 180

Query: 181 SPEEKSEVDAFNSSLASLISSVTQNDVESSKTAFVASASALEKWTALAGLVGQLKGL 233
           SPEEKSEVDAFNSSLASLISSVTQNDV+SSKTAFVA ASALEKWTALAGLVGQLKGL
Sbjct: 181 SPEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVALASALEKWTALAGLVGQLKGL 236

[Close]

BLAST of CmUC11G206760 vs. ExPASy TrEMBL
Match: A0A6J1KEL3 (thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493636 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.5e-103
Identity = 213/236 (90.25%), Postives = 227/236 (96.19%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTPSSSSSSSSS----PLLRSRFACLHCHNNAKRLVICKSNSDPPS 60
           MATSFLSTANTFHSS+PSSSSSSSSS    PLLRSRF+CL+C NNA+R VICK N+DPPS
Sbjct: 1   MATSFLSTANTFHSSSPSSSSSSSSSSSSPPLLRSRFSCLNCRNNARRSVICKGNNDPPS 60

Query: 61  QIPALTKRRLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGI 120
           +IP+LTKR LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQG+
Sbjct: 61  KIPSLTKRSLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLERQGV 120

Query: 121 ISSANKEKGYLQEVVYKLSKVGQAIDSNDFSTASSVLGGSSNADWVRNANLAFNKQLSSS 180
           ISSANKEKGYLQEVV+KLSKVGQAID+NDFSTASSVLGGS++ADWVRNANLAFNK LS+S
Sbjct: 121 ISSANKEKGYLQEVVFKLSKVGQAIDNNDFSTASSVLGGSNDADWVRNANLAFNK-LSTS 180

Query: 181 PEEKSEVDAFNSSLASLISSVTQNDVESSKTAFVASASALEKWTALAGLVGQLKGL 233
           PEEKSEVDAFNSSLASLISSVTQNDV+SSKTAFVASASALEKWTALAGLVGQLKGL
Sbjct: 181 PEEKSEVDAFNSSLASLISSVTQNDVQSSKTAFVASASALEKWTALAGLVGQLKGL 235

[Close]

BLAST of CmUC11G206760 vs. ExPASy TrEMBL
Match: A0A0A0LI29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006840 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.6e-102
Identity = 212/239 (88.70%), Postives = 224/239 (93.72%), Query Frame = 0


Query: 1   MATSFLSTANTFHSSTPSSSSSSSSS-------PLLRSRFACLHCHNNAKRLVICKSNSD 60
           MAT+FLSTANTFHSSTPSS SSSSSS       PL+RSRF CL+CHNN KRLVICKS+SD
Sbjct: 1   MATAFLSTANTFHSSTPSSPSSSSSSSSSYFTPPLIRSRFGCLYCHNNTKRLVICKSSSD 60

Query: 61  PPSQIPALTKRRLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLER 120
           PPS+IPALTKR LSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLE+
Sbjct: 61  PPSKIPALTKRTLSICFISSFIFPLVGQGFSDANAAILEADDDEELLEKVKKDRKKRLEK 120

Query: 121 QGIISSANKEKGYLQEVVYKLSKVGQAIDSNDFSTASSVLGGSSNADWVRNANLAFNKQL 180
           QG+ISSANKEKGYLQE+VYKLSKVGQAID+NDFSTASSVLGGSS+ADWV+ AN AFNK L
Sbjct: 121 QGVISSANKEKGYLQELVYKLSKVGQAIDNNDFSTASSVLGGSSDADWVKKANSAFNK-L 180

Query: 181 SSSPEEKSEVDAFNSSLASLISSVTQNDVESSKTAFVASASALEKWTALAGLVGQLKGL 233
           SSSPEEKSEVDAFNSSLASLISSVT+NDVESSKTAFVASASA EKWTALAGLVGQLKGL
Sbjct: 181 SSSPEEKSEVDAFNSSLASLISSVTKNDVESSKTAFVASASAFEKWTALAGLVGQLKGL 238

[Close]

BLAST of CmUC11G206760 vs. TAIR 10
Match: AT4G02530.1 (chloroplast thylakoid lumen protein )

HSP 1 Score: 194.5 bits (493), Expect = 9.4e-50
Identity = 132/238 (55.46%), Postives = 159/238 (66.81%), Query Frame = 0


Query: 1   MATSFL--STANTFHSSTPSSSSSSSSSPLLRSRFACLHCHNNAKRLVICKSNSDPPSQI 60
           MA S L  ST N F S+T SSS                      K  +    NS   +  
Sbjct: 1   MAKSLLCSSTLNPFFSTTLSSSK---------------------KNQIAYSGNSKNQTSS 60

Query: 61  PALTKRR-LSICFISSFI-FPLVG--QGFSDANAAILEADDDEELLEKVKKDRKKRLERQ 120
             L KRR LS+ F+SS +   LV   +   DANAAILEADDDEELLEKVK+DRKKR+ERQ
Sbjct: 61  SLLWKRRELSLGFMSSLVAIGLVSNDRRRHDANAAILEADDDEELLEKVKQDRKKRIERQ 120

Query: 121 GIISSANKEKGYLQEVVYKLSKVGQAIDSNDFSTASSVLGGSSNADWVRNANLAFNKQLS 180
            +++SA KEKGYLQ++VYKLSKVGQAI++ND   A  VLG   + +WV+  NLAF K LS
Sbjct: 121 AVLNSAVKEKGYLQDLVYKLSKVGQAIENNDLPAAGLVLGKGIDTEWVKTVNLAFTK-LS 180

Query: 181 SSPEEKSEVDAFNSSLASLISSVTQNDVESSKTAFVASASALEKWTALAGLVGQLKGL 233
           +SPEE +EV+AFNSSLASLI+SV +ND+ESSK AFV+SA A EKWT L GL+ QLKGL
Sbjct: 181 TSPEENTEVEAFNSSLASLITSVNKNDIESSKLAFVSSAGAFEKWTTLTGLLEQLKGL 216

The following BLAST results are available for this feature:

BLAST of CmUC11G206760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889145.1	5.1e-106	92.44	thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X1 [Benincasa hispida]	[more]
KAG7030378.1	2.5e-105	92.37	Thylakoid lumenal 16.5 kDa protein, chloroplastic, partial [Cucurbita argyrosper...	[more]
XP_023545851.1	3.3e-105	93.13	thylakoid lumenal 16.5 kDa protein, chloroplastic isoform X1 [Cucurbita pepo sub...	[more]
KAG6599393.1	3.3e-105	91.98	Thylakoid lumenal 16.5 kDa protein, chloroplastic, partial [Cucurbita argyrosper...	[more]
XP_008457444.1	1.8e-103	91.06	PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic [Cucumis melo] >KAA...	[more]

BLAST of CmUC11G206760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22773	1.3e-48	55.46	Thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]

BLAST of CmUC11G206760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V8J2	8.7e-104	91.06	Thylakoid lumenal 16.5 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C541	8.7e-104	91.06	thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1G2S1	1.5e-103	91.14	thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1KEL3	2.5e-103	90.25	thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN...	[more]
A0A0A0LI29	1.6e-102	88.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006840 PE=4 SV=1	[more]

BLAST of CmUC11G206760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02530.1	9.4e-50	55.46	chloroplast thylakoid lumen protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
IPR038862	Chloroplast thylakoid lumenal protein MPH2	PANTHER	PTHR35742	THYLAKOID LUMENAL 16.5 KDA PROTEIN, CHLOROPLASTIC	coord: 1..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC11G206760.1	CmUC11G206760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010206	photosystem II repair