CmUC11G205620 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC11G205620
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	60S ribosomal protein L31
Location	CmU531Chr11: 1944377 .. 1948453 (+)
RNA-Seq Expression	CmUC11G205620
Synteny	CmUC11G205620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGCATCAACGGAGCTAAAAGTGTACAAATGGAGGTTCCAGGTTTGTTTTTATTTGGAGGGTATCTCCGGCTAGAAATGTAATTTATGGCATCACCACTGACTTAGAAGATAAAGAGCCTGATACATTCAATATCTCTGTGGAAGAAATTATTATAGATTAGAGAGGCAATGGTCAGACTCATAATTACCTCCAACATTTGGCCATTTTTTCAAGTGGGTCTTCATTTGCTTCCTGTTTAACCCATTCATTTCTGCAATTGGAGGTTCTGTTCTGTCTTTAATTTGTTATAGATTTGGACATAATTTGTTTTCTTGCTCTTCAAGATATTATCTGTTGGGCCCTCCTAATTGTAGCCTGATGTATTGTACTTGAACAGGGCTTTGAAAGTTCTCTCATCTTTGTATTTCTACTTCTAGACTTCTCACTTAGACGTGCAAAAAATATATATATATCTACCTTAACTAGTTGAATTTTTTTTAGATTGACAATGATTTGTTTGTCTCGTTGTTGATTATGCTCTATTTTTCTTTTCTTTTCTCTTGTTAAGTGAAAACTAGAGTCGAATTGGGTATTTTTATTTTTAAAAATGGCGTTGTTTCGTGGCAAATGTAATGAAATGTTCGGGAGGGGTTCAGTATTCTTGCTATATATCTAGTCATTGCTTCTTTTCAGTCTATGAAGAGATGGTGTAGTCTTGGGTTTATGACTGATATTATGTATGTACAATAATCACCTCATAAATCTTCATCAATTTATTCTTCTTGACCTTTTTAAATATATAACACTACATGAAAACTTTAGTTATTTAGATATGGGTTAACTTTTTAAAATTTACCTTTTTATTTAGTTTTCTCTATCATTAAACTTGATCTTTTAATTTACTTGATTTAACCTCTTTTCCTACCAACTAATAGTTAGTAACATAAAAAGGGCAATTATTTTAAATATGTCAAAACTGCCAAAAATAGTTTTAAATATAATAAAATGTCCATGTCCATTTAGAGACATTGTTAGATGATAAAAATATATTAGTATCTATCACGATATTTTGCTGTATTTGTAAATATTTTGATTCATTTTGCTATATCCGAAAACAACTCGCATAACAAATACAAATATAACATCATCTAGCTACAAATAATACTCATAACTAAACACAAATCTTTAGATAAATAAATATTAACTAATTTTATACATGTATTTTTTATATTTATCTCTCAAATTGATTTTACTTTTCAAGTGATTTTCAAAACATTCTACTTTAATTTCGAAAAGAAAACATTGGAGATATGATTTGATTTGATTCGTATATATGTGTGTATTTTGTTATTTGAGTCCACTGTTAAACATTTTTGTGGTAGAAAAAACCAGCACAATTGTCAAAATGCAAAAATTTTCTCAGTTAGGAGAATTTTGAATATTTATCGAATAAGTATTTGAGATTTTTACATAAAGCACCTTTTTTTGTCCATTTTTTTATATATTATTTTAATGCAATTTTTATATGATTGATCTGACTTATTTGAGTTTGTCTAGACATACCATAGTATATACCATAGTTTAGATTCATAGTTATTTATAAATAAACATAAGGATATTTGTCTTAGATGTTTGTAAATGAACATAATAATCAATATGTATTAATGTATATATCATAAAACAAAAATGTTTCAATAAAAAATTGAAGACATAAATGAATATATATATCACAGTATATATCCAAAAATCACTTTATATACCAAAAATAAATATACTCATAATTTTGAAATAAAAAAAGCTATATACCACCGAACATAATATTCAATATATAATATATCATAAAACAGAAAGTTTTAATAAAAAATTGAAGATATATGTCATAGTATATATCCAAAAAATAAAGTAGTTTCGATATAACCGTCATACAACCGTCTGTCTCCTGCCGGCGACTCACACCGCCGGGAAGGAGAAAAGTAAGGAAGGAGAAAAGAGAGGAAGAGGAAGTTATGTTCTTCTCACTAGATCTGCTTCATGTTCGTCTTCCGCGCCGAATCTGCTCGCCCCTCGCCAAATATGCTCTCCCCGCGCTAGAGATGCGCCGGACCTACTTGCCCTCTGCCGAAACATGCACCGGATCTACTCACCCTGCGGCGAAAGAAGCATCAGATTTGCTTGTCACGCCATCCATCTCCCGCTTGCAACTCACACTGCTGGGAAGGAGAAAAGGAACGGAGGAGGAAGAATTTCAACCATCCTTTTATCCTTTTTTCTTTTTTAAAAAGACATCAATGGGCATGAAGCCCTACTTGAAAATGGAGGAGAGAGATTAACTTTATTTGTATAAGACCTAAATGGTAAATAGTCTATGGCATAGATGAAAAAAAAGTCTAGAAAGAAGGTAAAAATGGAATGAACGTAATACGAGCCTTATATTAAGGCTTTTAATTTAAATATGCTCAAATGGGTCTATTTTGGTCCCTGAGCCCATTTATTATACTCCTTGGCCCATATTTAGGCCCAAACTGGATAATAATTTAATCTGGGCTTTCTTTAACGAAATCCGCGTCGCAATAAGCCCGCGATAATTTCAATCCTTATATAAATTCAGCATTAGGGTTTTTTTGTGCCTCTGAAGATCTTCTCTTTCGTTGGAGGCCACTCTTCGCGTCGCTGAACGCCAGGTCTCTAGTCTGCAACTCTAAACACATCTCTTCTCAATTATTAGTTTGGTACTTCATTTTCGCACTTGAAGCTTTGGATATTGGGAAATCATCAACATTTTTGGTTTTGATTACTTTTTTTTGTTTTTGCTTCGATCGTCTTACCCACTTCGTCGCATTTCTATTATTTGTTGCTTATGGATCCTCATATTAGATAGTGCAATTGGATTTTCTGCATCGTAGAACTTAGGTAGTTAAAAAATTTCTGCTTATGGTGGACTTGTATTCATTGGCTTACTGGTACAGGTGTTTCTAAGAGACTTAAAAATGGTGGAGAAGACCAAAGGGAGAAAGGAGGAGGTGGTTACCAGAGAGTATACTATCAACCTCCACAAACGCCTTCATGGCTGGTACGTTCATTTTATCTGCCTCCCCTATGTGCTTTTTTCTCTTTTTAATAGTCGTTATTTATATTCTAGCTGATTTCACATAATGTACTTTATGTGGAGGAGTAACCTCGATTTAGTAATGATTATGTGTTATAACTTCAGGTTGTATTTGTACATCATTTGGAAGTGCGTGCTATGAATTTACTGTTGCTTCCTTTCCCTTGCAACTATGTAGATTGCATTAGATTGGTATTACTTCAGTTAGTTCTCCCAGTGCCTGTGAAATCCAATTCTTTTGACTGTTTTAGTTTATTGCCATATATGGTCACTGATACAGATAGAGTGGAGGGTTTTTTTTTTTTTTGTTCACATGTAGATTTATGTATGTCTTAGACCATGATTGACAATTTGACAGTGTATTGTCATTACCTCCCCATTTCTATTTAACGTGCATCTTTATCTATTTTCACGATTGTATCATTTCTGGAAATAATGTGAACCGCAATAATAGTGTTGTTTCTTACTCATTAGCCCTTAACGTTTGTGAATGAACAGCACCTTTAAGAAGAAGGCACCCAAGGCCATCAAGGAGATCAGGAAGTTTGCTGAGAAGGCCATGGGCACAAAGGATGTGAGAGTGGATGTGAAGCTGAACAAGCATATCTGGAGCAGGGGAATTAGGAGTGTGCCCAGAAGAATCAGAGTTCGCATTGCTCGCAAGAGAAACGATGATGAAGATGCCAAGGAAGAGTTGTACTCCCTTGTGACAGTTGCAGAAATCCCAGCAGAAGGACTGAAGGGACTTGGGACCAAAGTCATTGAGGAAGATGATTGAGTTGTCATCTGTTTTTGAGGGTAAGATGAGATTAGGTGCTTGTAGTTTTGATTTGTTGAATGAAAGAAGACTGTCATACTTAATTGTTGTCTTGGAGATTTTTTTCTGTTAAATTAACTTATAGTTCCTGGACTTTCATATTATTAAGTTCAAATGTTTTTGGGTTACGTTGAGCAATTCACATCACATCCATATTATATAATTAACA

mRNA sequence

ATGAGGGCATCAACGGAGCTAAAAGTGTACAAATGGAGGTTCCAGCCTGATGTATTGTACTTGAACAGGGCTTTGAAAGTTCTCTCATCTTTATCTTCTCTTTCGTTGGAGGCCACTCTTCGCGTCGCTGAACGCCAGGTGTTTCTAAGAGACTTAAAAATGGTGGAGAAGACCAAAGGGAGAAAGGAGGAGGTGGTTACCAGAGAGTATACTATCAACCTCCACAAACGCCTTCATGGCTGGTACGTTGTATTTGTACATCATTTGGAAGTGCGTGCTATGAATTTACTGTTGCTTCCTTTCCCTTGCAACTATGTAGATTGCATTAGATTGGTATTACTTCAATTTATCACCTTTAAGAAGAAGGCACCCAAGGCCATCAAGGAGATCAGGAAGTTTGCTGAGAAGGCCATGGGCACAAAGGATGTGAGAGTGGATGTGAAGCTGAACAAGCATATCTGGAGCAGGGGAATTAGGAGTGTGCCCAGAAGAATCAGAGTTCGCATTGCTCGCAAGAGAAACGATGATGAAGATGCCAAGGAAGAGTTGTACTCCCTTGTGACAGTTGCAGAAATCCCAGCAGAAGGACTGAAGGGACTTGGGACCAAAGTCATTGAGGAAGATGATTGAGTTGTCATCTGTTTTTGAGGGTAAGATGAGATTAGGTGCTTGTAGTTTTGATTTGTTGAATGAAAGAAGACTGTCATACTTAATTGTTGTCTTGGAGATTTTTTTCTGTTAAATTAACTTATAGTTCCTGGACTTTCATATTATTAAGTTCAAATGTTTTTGGGTTACGTTGAGCAATTCACATCACATCCATATTATATAATTAACA

Coding sequence (CDS)

ATGAGGGCATCAACGGAGCTAAAAGTGTACAAATGGAGGTTCCAGCCTGATGTATTGTACTTGAACAGGGCTTTGAAAGTTCTCTCATCTTTATCTTCTCTTTCGTTGGAGGCCACTCTTCGCGTCGCTGAACGCCAGGTGTTTCTAAGAGACTTAAAAATGGTGGAGAAGACCAAAGGGAGAAAGGAGGAGGTGGTTACCAGAGAGTATACTATCAACCTCCACAAACGCCTTCATGGCTGGTACGTTGTATTTGTACATCATTTGGAAGTGCGTGCTATGAATTTACTGTTGCTTCCTTTCCCTTGCAACTATGTAGATTGCATTAGATTGGTATTACTTCAATTTATCACCTTTAAGAAGAAGGCACCCAAGGCCATCAAGGAGATCAGGAAGTTTGCTGAGAAGGCCATGGGCACAAAGGATGTGAGAGTGGATGTGAAGCTGAACAAGCATATCTGGAGCAGGGGAATTAGGAGTGTGCCCAGAAGAATCAGAGTTCGCATTGCTCGCAAGAGAAACGATGATGAAGATGCCAAGGAAGAGTTGTACTCCCTTGTGACAGTTGCAGAAATCCCAGCAGAAGGACTGAAGGGACTTGGGACCAAAGTCATTGAGGAAGATGATTGA

Protein sequence

MRASTELKVYKWRFQPDVLYLNRALKVLSSLSSLSLEATLRVAERQVFLRDLKMVEKTKGRKEEVVTREYTINLHKRLHGWYVVFVHHLEVRAMNLLLLPFPCNYVDCIRLVLLQFITFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD

Homology

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BLAST of CmUC11G205620 vs. NCBI nr
Match: MBA0816999.1 (hypothetical protein [Gossypium harknessii])

HSP 1 Score: 219.9 bits (559), Expect = 2.0e-53
Identity = 123/159 (77.36%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 54  MVEKTKGRKEEVVTREYTINLHKRLHGWYVVFVH---HLEVRAMNLLLLPFPCNYVDCIR 113
           MVEKT+GRKEEVV+REYTINLHKRLHGW +   +    L  +  + L+L    N  DC  
Sbjct: 1   MVEKTRGRKEEVVSREYTINLHKRLHGWSLRLDNSCARLRTQLFSALVLSRVEN--DC-S 60

Query: 114 LVLLQFITFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIA 173
           LV+    TFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIA
Sbjct: 61  LVIFVNSTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIA 120

Query: 174 RKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 210
           RKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI++DD
Sbjct: 121 RKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDDD 156

[Close]

BLAST of CmUC11G205620 vs. NCBI nr
Match: RVW38234.1 (60S ribosomal protein L31 [Vitis vinifera])

HSP 1 Score: 216.5 bits (550), Expect = 2.2e-52
Identity = 121/156 (77.56%), Postives = 125/156 (80.13%), Query Frame = 0


Query: 54  MVEKTKGRKEEVVTREYTINLHKRLHGWYVVFVHHLEVRAMNLLLLPFPCNYVDCIRLVL 113
           MVEKTKGRKEEVVTREYTINLHKRLHG                      C Y D + +V 
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHG----------------------CLYRD-LYVVF 60

Query: 114 LQFITFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKR 173
           L   TFKKKAPKAIKEIRKFA+KAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKR
Sbjct: 61  LNNSTFKKKAPKAIKEIRKFAQKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKR 120

Query: 174 NDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 210
           NDDEDAKEELYSLVTVAEIPAEGLKGL TK+IEEDD
Sbjct: 121 NDDEDAKEELYSLVTVAEIPAEGLKGLETKIIEEDD 133

[Close]

BLAST of CmUC11G205620 vs. NCBI nr
Match: KAF4371415.1 (hypothetical protein F8388_001943 [Cannabis sativa] >KAF4398587.1 hypothetical protein G4B88_013676 [Cannabis sativa])

HSP 1 Score: 215.7 bits (548), Expect = 3.8e-52
Identity = 120/156 (76.92%), Postives = 123/156 (78.85%), Query Frame = 0


Query: 54  MVEKTKGRKEEVVTREYTINLHKRLHGWYVVFVHHLEVRAMNLLLLPFPCNYVDCIRLVL 113
           MVEKTKGRKEEVV+REYTINLHKRLHGW+V                    NYV C     
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGWWVSIAF---------------VNYVCCCEKT- 60

Query: 114 LQFITFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKR 173
               TFKKKAP AIKEIRKFA+KAMGT DVRVDVKLNK IWSRGIRSVPRRIRVRIARKR
Sbjct: 61  --DSTFKKKAPNAIKEIRKFAQKAMGTNDVRVDVKLNKQIWSRGIRSVPRRIRVRIARKR 120

Query: 174 NDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 210
           NDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
Sbjct: 121 NDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 138

[Close]

BLAST of CmUC11G205620 vs. NCBI nr
Match: MBA0737650.1 (hypothetical protein [Gossypium gossypioides])

HSP 1 Score: 215.3 bits (547), Expect = 5.0e-52
Identity = 122/163 (74.85%), Postives = 128/163 (78.53%), Query Frame = 0


Query: 54  MVEKTKGRKEEVVTREYTINLHKRLHGWYVVFVHHLEVRAMNLLLLPFPC----NYVDCI 113
           MVEKT+GRKEEVVTREYTINLHKRLHG                  +P  C     + D I
Sbjct: 1   MVEKTRGRKEEVVTREYTINLHKRLHG-----------------CIPTGCIPEQRFKDMI 60

Query: 114 RLVLLQF---ITFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIR 173
            L  +Q     TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIR
Sbjct: 61  LLRTIQMHENFTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIR 120

Query: 174 VRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 210
           VRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI++DD
Sbjct: 121 VRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDDD 146

[Close]

BLAST of CmUC11G205620 vs. NCBI nr
Match: XP_022154770.1 (60S ribosomal protein L31 [Momordica charantia])

HSP 1 Score: 211.8 bits (538), Expect = 5.5e-51
Identity = 118/156 (75.64%), Postives = 119/156 (76.28%), Query Frame = 0


Query: 54  MVEKTKGRKEEVVTREYTINLHKRLHGWYVVFVHHLEVRAMNLLLLPFPCNYVDCIRLVL 113
           MVEKTKGRKEEVVTREYTINLHKRLHG                                 
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHG--------------------------------- 60

Query: 114 LQFITFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKR 173
               TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKR
Sbjct: 61  ---CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKR 120

Query: 174 NDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 210
           NDDEDAKEELYSLVTV+EIPAEGLKGLGTKVIEEDD
Sbjct: 121 NDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120

[Close]

BLAST of CmUC11G205620 vs. ExPASy Swiss-Prot
Match: P46290 (60S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 5.3e-49
Identity = 108/156 (69.23%), Postives = 115/156 (73.72%), Query Frame = 0


Query: 54  MVEKTKGRKEEVVTREYTINLHKRLHGWYVVFVHHLEVRAMNLLLLPFPCNYVDCIRLVL 113
           M +KTKGRKEEVVTREYTINLHKRLH                                  
Sbjct: 1   MSDKTKGRKEEVVTREYTINLHKRLHS--------------------------------- 60

Query: 114 LQFITFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKR 173
               TFKKKAP AIKEIRKFA+KAMGTKDVRVDVKLNK IWSRGIRSVPRR+RVRIARKR
Sbjct: 61  ---CTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSRGIRSVPRRVRVRIARKR 120

Query: 174 NDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 210
           NDDEDAKEELYSLVTVAEIPA+GLKGLGTK+IE++D
Sbjct: 121 NDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDED 120

[Close]

BLAST of CmUC11G205620 vs. ExPASy Swiss-Prot
Match: Q9MAV7 (60S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 9.1e-49
Identity = 109/156 (69.87%), Postives = 114/156 (73.08%), Query Frame = 0


Query: 54  MVEKTKGRKEEVVTREYTINLHKRLHGWYVVFVHHLEVRAMNLLLLPFPCNYVDCIRLVL 113
           MVEKTKGRKEEVVTREYTINLHKRLHG                                 
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHG--------------------------------- 60

Query: 114 LQFITFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKR 173
               TFKKKAP AIKEIRKFA+KAMGTKDVRVDVKLNK IWSRGIRSVPRR+RVRIARKR
Sbjct: 61  ---CTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSRGIRSVPRRVRVRIARKR 120

Query: 174 NDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 210
           NDDEDAKEELYSLVTVA+IPA  LKGLG ++IEEDD
Sbjct: 121 NDDEDAKEELYSLVTVAKIPAGTLKGLGPQIIEEDD 120

[Close]

BLAST of CmUC11G205620 vs. ExPASy Swiss-Prot
Match: Q9M573 (60S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 4.2e-46
Identity = 104/152 (68.42%), Postives = 111/152 (73.03%), Query Frame = 0


Query: 58  TKGRKEEVVTREYTINLHKRLHGWYVVFVHHLEVRAMNLLLLPFPCNYVDCIRLVLLQFI 117
           +K RKEEVV+REYTINLHKRLHG                                     
Sbjct: 6   SKPRKEEVVSREYTINLHKRLHG------------------------------------C 65

Query: 118 TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE 177
           TFKKKAPKAIKEIRKFA+KAMGT DVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE
Sbjct: 66  TFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDE 121

Query: 178 DAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 210
           DAKEELYSLVTVAEIP  GLKGLGT+VI+E++
Sbjct: 126 DAKEELYSLVTVAEIPEGGLKGLGTQVIDEEE 121

[Close]

BLAST of CmUC11G205620 vs. ExPASy Swiss-Prot
Match: P51420 (60S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2)

HSP 1 Score: 184.5 bits (467), Expect = 1.2e-45
Identity = 102/155 (65.81%), Postives = 110/155 (70.97%), Query Frame = 0


Query: 55  VEKTKGRKEEVVTREYTINLHKRLHGWYVVFVHHLEVRAMNLLLLPFPCNYVDCIRLVLL 114
           + + KGRKEEV+TREYTINLH+RLH                                   
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHK---------------------------------- 60

Query: 115 QFITFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRN 174
              TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRN
Sbjct: 61  --CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRN 119

Query: 175 DDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 210
           DDEDAKEE +SLVTVAEIPAEGL GLGTKVIEE+D
Sbjct: 121 DDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]

BLAST of CmUC11G205620 vs. ExPASy Swiss-Prot
Match: Q9STR1 (60S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.7e-45
Identity = 101/155 (65.16%), Postives = 109/155 (70.32%), Query Frame = 0


Query: 55  VEKTKGRKEEVVTREYTINLHKRLHGWYVVFVHHLEVRAMNLLLLPFPCNYVDCIRLVLL 114
           + + KGRKEEVVTREYTINLH+RLH                                   
Sbjct: 1   MSEKKGRKEEVVTREYTINLHRRLHS---------------------------------- 60

Query: 115 QFITFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRN 174
              TFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRN
Sbjct: 61  --CTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRN 119

Query: 175 DDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 210
           DDEDAKEE +SLVTVAEIPAEGL GLGTK+IEE+D
Sbjct: 121 DDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]

BLAST of CmUC11G205620 vs. ExPASy TrEMBL
Match: A0A7J9I4G3 (Uncharacterized protein OS=Gossypium harknessii OX=34285 GN=Gohar_001602 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 9.8e-54
Identity = 123/159 (77.36%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 54  MVEKTKGRKEEVVTREYTINLHKRLHGWYVVFVH---HLEVRAMNLLLLPFPCNYVDCIR 113
           MVEKT+GRKEEVV+REYTINLHKRLHGW +   +    L  +  + L+L    N  DC  
Sbjct: 1   MVEKTRGRKEEVVSREYTINLHKRLHGWSLRLDNSCARLRTQLFSALVLSRVEN--DC-S 60

Query: 114 LVLLQFITFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIA 173
           LV+    TFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIA
Sbjct: 61  LVIFVNSTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIA 120

Query: 174 RKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 210
           RKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI++DD
Sbjct: 121 RKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDDD 156

[Close]

BLAST of CmUC11G205620 vs. ExPASy TrEMBL
Match: A0A438DRZ1 (60S ribosomal protein L31 OS=Vitis vinifera OX=29760 GN=RPL31_2 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.1e-52
Identity = 121/156 (77.56%), Postives = 125/156 (80.13%), Query Frame = 0


Query: 54  MVEKTKGRKEEVVTREYTINLHKRLHGWYVVFVHHLEVRAMNLLLLPFPCNYVDCIRLVL 113
           MVEKTKGRKEEVVTREYTINLHKRLHG                      C Y D + +V 
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHG----------------------CLYRD-LYVVF 60

Query: 114 LQFITFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKR 173
           L   TFKKKAPKAIKEIRKFA+KAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKR
Sbjct: 61  LNNSTFKKKAPKAIKEIRKFAQKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKR 120

Query: 174 NDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 210
           NDDEDAKEELYSLVTVAEIPAEGLKGL TK+IEEDD
Sbjct: 121 NDDEDAKEELYSLVTVAEIPAEGLKGLETKIIEEDD 133

[Close]

BLAST of CmUC11G205620 vs. ExPASy TrEMBL
Match: A0A7J6FLA9 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_001943 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.8e-52
Identity = 120/156 (76.92%), Postives = 123/156 (78.85%), Query Frame = 0


Query: 54  MVEKTKGRKEEVVTREYTINLHKRLHGWYVVFVHHLEVRAMNLLLLPFPCNYVDCIRLVL 113
           MVEKTKGRKEEVV+REYTINLHKRLHGW+V                    NYV C     
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGWWVSIAF---------------VNYVCCCEKT- 60

Query: 114 LQFITFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKR 173
               TFKKKAP AIKEIRKFA+KAMGT DVRVDVKLNK IWSRGIRSVPRRIRVRIARKR
Sbjct: 61  --DSTFKKKAPNAIKEIRKFAQKAMGTNDVRVDVKLNKQIWSRGIRSVPRRIRVRIARKR 120

Query: 174 NDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 210
           NDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD
Sbjct: 121 NDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 138

[Close]

BLAST of CmUC11G205620 vs. ExPASy TrEMBL
Match: A0A7J9BNA8 (Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_011104 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 2.4e-52
Identity = 122/163 (74.85%), Postives = 128/163 (78.53%), Query Frame = 0


Query: 54  MVEKTKGRKEEVVTREYTINLHKRLHGWYVVFVHHLEVRAMNLLLLPFPC----NYVDCI 113
           MVEKT+GRKEEVVTREYTINLHKRLHG                  +P  C     + D I
Sbjct: 1   MVEKTRGRKEEVVTREYTINLHKRLHG-----------------CIPTGCIPEQRFKDMI 60

Query: 114 RLVLLQF---ITFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIR 173
            L  +Q     TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIR
Sbjct: 61  LLRTIQMHENFTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIR 120

Query: 174 VRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 210
           VRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVI++DD
Sbjct: 121 VRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDDD 146

[Close]

BLAST of CmUC11G205620 vs. ExPASy TrEMBL
Match: A0A6J1DKK4 (60S ribosomal protein L31 OS=Momordica charantia OX=3673 GN=LOC111021941 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.7e-51
Identity = 118/156 (75.64%), Postives = 119/156 (76.28%), Query Frame = 0


Query: 54  MVEKTKGRKEEVVTREYTINLHKRLHGWYVVFVHHLEVRAMNLLLLPFPCNYVDCIRLVL 113
           MVEKTKGRKEEVVTREYTINLHKRLHG                                 
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHG--------------------------------- 60

Query: 114 LQFITFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKR 173
               TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKR
Sbjct: 61  ---CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKR 120

Query: 174 NDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 210
           NDDEDAKEELYSLVTV+EIPAEGLKGLGTKVIEEDD
Sbjct: 121 NDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120

[Close]

BLAST of CmUC11G205620 vs. TAIR 10
Match: AT5G56710.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 184.5 bits (467), Expect = 8.8e-47
Identity = 102/155 (65.81%), Postives = 110/155 (70.97%), Query Frame = 0


Query: 55  VEKTKGRKEEVVTREYTINLHKRLHGWYVVFVHHLEVRAMNLLLLPFPCNYVDCIRLVLL 114
           + + KGRKEEV+TREYTINLH+RLH                                   
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHK---------------------------------- 60

Query: 115 QFITFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRN 174
              TFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRN
Sbjct: 61  --CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRN 119

Query: 175 DDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 210
           DDEDAKEE +SLVTVAEIPAEGL GLGTKVIEE+D
Sbjct: 121 DDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]

BLAST of CmUC11G205620 vs. TAIR 10
Match: AT4G26230.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 183.3 bits (464), Expect = 1.9e-46
Identity = 101/155 (65.16%), Postives = 109/155 (70.32%), Query Frame = 0


Query: 55  VEKTKGRKEEVVTREYTINLHKRLHGWYVVFVHHLEVRAMNLLLLPFPCNYVDCIRLVLL 114
           + + KGRKEEVVTREYTINLH+RLH                                   
Sbjct: 1   MSEKKGRKEEVVTREYTINLHRRLHS---------------------------------- 60

Query: 115 QFITFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRN 174
              TFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRN
Sbjct: 61  --CTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRN 119

Query: 175 DDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 210
           DDEDAKEE +SLVTVAEIPAEGL GLGTK+IEE+D
Sbjct: 121 DDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]

BLAST of CmUC11G205620 vs. TAIR 10
Match: AT2G19740.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 182.2 bits (461), Expect = 4.3e-46
Identity = 102/155 (65.81%), Postives = 109/155 (70.32%), Query Frame = 0


Query: 55  VEKTKGRKEEVVTREYTINLHKRLHGWYVVFVHHLEVRAMNLLLLPFPCNYVDCIRLVLL 114
           +EK KGRKEEVVTREYTINLH+RLH                                   
Sbjct: 1   MEKGKGRKEEVVTREYTINLHRRLHS---------------------------------- 60

Query: 115 QFITFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRN 174
              TFKKKAP AIKEIRKFA KAMGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRN
Sbjct: 61  --CTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRN 119

Query: 175 DDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 210
           DDEDAKEE +SLVTVAEIPAEGL GLGTKVIEE++
Sbjct: 121 DDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119

[Close]

BLAST of CmUC11G205620 vs. TAIR 10
Match: AT5G56710.2 (Ribosomal protein L31e family protein )

HSP 1 Score: 110.2 bits (274), Expect = 2.1e-24
Identity = 73/155 (47.10%), Postives = 79/155 (50.97%), Query Frame = 0


Query: 55  VEKTKGRKEEVVTREYTINLHKRLHGWYVVFVHHLEVRAMNLLLLPFPCNYVDCIRLVLL 114
           + + KGRKEEV+TREYTINLH+RLH                                   
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHK---------------------------------- 60

Query: 115 QFITFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRN 174
              TFKKKAPKAIKEIRKFAEKAMGTKDVRVD                            
Sbjct: 61  --CTFKKKAPKAIKEIRKFAEKAMGTKDVRVD---------------------------- 85

Query: 175 DDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 210
                 EE +SLVTVAEIPAEGL GLGTKVIEE+D
Sbjct: 121 ------EEFFSLVTVAEIPAEGLSGLGTKVIEEED 85

The following BLAST results are available for this feature:

BLAST of CmUC11G205620 vs. NCBI nr


Match Name	E-value	Identity	Description
MBA0816999.1	2.0e-53	77.36	hypothetical protein [Gossypium harknessii]	[more]
RVW38234.1	2.2e-52	77.56	60S ribosomal protein L31 [Vitis vinifera]	[more]
KAF4371415.1	3.8e-52	76.92	hypothetical protein F8388_001943 [Cannabis sativa] >KAF4398587.1 hypothetical p...	[more]
MBA0737650.1	5.0e-52	74.85	hypothetical protein [Gossypium gossypioides]	[more]
XP_022154770.1	5.5e-51	75.64	60S ribosomal protein L31 [Momordica charantia]	[more]

BLAST of CmUC11G205620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46290	5.3e-49	69.23	60S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1	[more]
Q9MAV7	9.1e-49	69.87	60S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1	[more]
Q9M573	4.2e-46	68.42	60S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1	[more]
P51420	1.2e-45	65.81	60S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2	[more]
Q9STR1	2.7e-45	65.16	60S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1	[more]

BLAST of CmUC11G205620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J9I4G3	9.8e-54	77.36	Uncharacterized protein OS=Gossypium harknessii OX=34285 GN=Gohar_001602 PE=3 SV...	[more]
A0A438DRZ1	1.1e-52	77.56	60S ribosomal protein L31 OS=Vitis vinifera OX=29760 GN=RPL31_2 PE=3 SV=1	[more]
A0A7J6FLA9	1.8e-52	76.92	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_001943 PE=3 SV=1	[more]
A0A7J9BNA8	2.4e-52	74.85	Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_011104 PE=3 ...	[more]
A0A6J1DKK4	2.7e-51	75.64	60S ribosomal protein L31 OS=Momordica charantia OX=3673 GN=LOC111021941 PE=3 SV...	[more]

BLAST of CmUC11G205620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56710.1	8.8e-47	65.81	Ribosomal protein L31e family protein	[more]
AT4G26230.1	1.9e-46	65.16	Ribosomal protein L31e family protein	[more]
AT2G19740.1	4.3e-46	65.81	Ribosomal protein L31e family protein	[more]
AT5G56710.2	2.1e-24	47.10	Ribosomal protein L31e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000054	Ribosomal protein L31e	SMART	SM01380	Ribosomal_L31e_2	coord: 63..182 e-value: 1.5E-45 score: 167.3
IPR000054	Ribosomal protein L31e	PFAM	PF01198	Ribosomal_L31e	coord: 115..181 e-value: 6.5E-31 score: 106.4
IPR000054	Ribosomal protein L31e	PANTHER	PTHR10956	60S RIBOSOMAL PROTEIN L31	coord: 54..209
IPR000054	Ribosomal protein L31e	CDD	cd00463	Ribosomal_L31e	coord: 62..181 e-value: 1.376E-30 score: 105.729
IPR023621	Ribosomal protein L31e domain superfamily	GENE3D	3.10.440.10		coord: 110..209 e-value: 4.9E-38 score: 131.5
IPR023621	Ribosomal protein L31e domain superfamily	SUPERFAMILY	54575	Ribosomal protein L31e	coord: 113..181
None	No IPR available	PANTHER	PTHR10956:SF33	60S RIBOSOMAL PROTEIN L31-2-RELATED	coord: 54..209
IPR020052	Ribosomal protein L31e, conserved site	PROSITE	PS01144	RIBOSOMAL_L31E	coord: 143..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC11G205620.1	CmUC11G205620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome